ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV3084 good AJ KOG2573 RNA processing and modification Ribosome biogenesis protein - Nop56p/Sik1p
r_klactIV3084 good AJ KOG2573 Translation, ribosomal structure and biogenesis Ribosome biogenesis protein - Nop56p/Sik1p
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV3084 1045077 1046615 513
(513 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YLR197w [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p 796 0.0
SPBC646.10c [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p 562 e-160
At3g12860 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p 471 e-132
At1g56110 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p 466 e-131
7300850 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p 443 e-124
CE06114 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p 441 e-123
Hs5453794_1 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p 439 e-123
At3g05060 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p 335 7e-92
SPAC23G3.06 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p 334 2e-91
At5g27120 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p 332 8e-91
YOR310c [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p 322 8e-88
7297189 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p 315 8e-86
CE18307 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p 315 1e-85
Hs7706254 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p 305 8e-83
ECU09g1600 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p 254 2e-67
At5g27140 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p 242 1e-63
ECU04g0820 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p 225 1e-58
Hs7661654 [A] KOG2574 mRNA splicing factor PRP31 115 2e-25
Hs17448109_1 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/S... 100 7e-21
SPBC119.13c [A] KOG2574 mRNA splicing factor PRP31 99 2e-20
7294306 [A] KOG2574 mRNA splicing factor PRP31 92 2e-18
At1g60170 [A] KOG2574 mRNA splicing factor PRP31 86 1e-16
CE24126 [A] KOG2574 mRNA splicing factor PRP31 83 1e-15
YGR091w [A] KOG2574 mRNA splicing factor PRP31 68 3e-11
At3g60610 [A] KOG2574 mRNA splicing factor PRP31 68 4e-11
>YLR197w [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p
Length = 504
Score = 796 bits (2055), Expect = 0.0
Identities = 404/458 (88%), Positives = 432/458 (94%), Gaps = 2/458 (0%)
Query: 1 MAPIEYLLFEEPTGYGIFKVKLQQDDIGSRLKEVQQQINDFGSFTKLVELVSFAPFKGAA 60
MAPIEYLLFEEPTGY +FKVKLQQDDIGSRLKEVQ+QINDFG+FTKL+ELVSFAPFKGAA
Sbjct: 1 MAPIEYLLFEEPTGYAVFKVKLQQDDIGSRLKEVQEQINDFGAFTKLIELVSFAPFKGAA 60
Query: 61 QALENANDISEGLVSEHLKALLDLNLPKGSSKK-TVTLAISDKNLGPSIKEVFPFVDCIS 119
+ALENANDISEGLVSE LKA+LDLNLPK SSKK +TLAISDKNLGPSIKE FP+VDCIS
Sbjct: 61 EALENANDISEGLVSESLKAILDLNLPKASSKKKNITLAISDKNLGPSIKEEFPYVDCIS 120
Query: 120 NELAQDLIRGVRLHGDKLLKDLQPGDLERAQLGLGHAYSRAKVKFSVQKNDNHIIQAIAL 179
NELAQDLIRGVRLHG+KL K LQ GDLERAQLGLGHAYSRAKVKFSVQKNDNHIIQAIAL
Sbjct: 121 NELAQDLIRGVRLHGEKLFKGLQSGDLERAQLGLGHAYSRAKVKFSVQKNDNHIIQAIAL 180
Query: 180 LDQLDKDINTFAMRVKEWYGWHFPELAKLVPDNYKFAKLVLFIKDKASLNEESLHDLSEI 239
LDQLDKDINTFAMRVKEWYGWHFPELAKLVPDNY FAKLVLFIKDKASLN++SLHDL+ +
Sbjct: 181 LDQLDKDINTFAMRVKEWYGWHFPELAKLVPDNYTFAKLVLFIKDKASLNDDSLHDLAAL 240
Query: 240 LDNDAGISERVIDNARISMGQDLSETDMENVTIFAKRVVSLVEYRKQLYDYLCEKMHTVA 299
L+ D+GI++RVIDNARISMGQD+SETDMENV +FA+RV SL +YR+QLYDYLCEKMHTVA
Sbjct: 241 LNEDSGIAQRVIDNARISMGQDISETDMENVCVFAQRVASLADYRRQLYDYLCEKMHTVA 300
Query: 300 PNLSELIGEVIGARLISHSGSLTNLSKQAASTVQILGAEKALFRALKTKGNTPKYGLIYH 359
PNLSELIGEVIGARLISH+GSLTNLSKQAASTVQILGAEKALFRALKTKGNTPKYGLIYH
Sbjct: 301 PNLSELIGEVIGARLISHAGSLTNLSKQAASTVQILGAEKALFRALKTKGNTPKYGLIYH 360
Query: 360 SGFIAKASAKNKGRISRYLANKCSMASRIDNYSDEPSNVFGQVLKKQVEQRLEFYASGTP 419
SGFI+KASAKNKGRISRYLANKCSMASRIDNYS+EPSNVFG VLKKQVEQRLEFY +G P
Sbjct: 361 SGFISKASAKNKGRISRYLANKCSMASRIDNYSEEPSNVFGSVLKKQVEQRLEFYNTGKP 420
Query: 420 TLKNESAIKEAIELYNKDKPAHE-EEVDTTEVSKKRKL 456
TLKNE AI+EA+ELYNKDKPA E EE E SKKRKL
Sbjct: 421 TLKNELAIQEAMELYNKDKPAAEVEETKEKESSKKRKL 458
>SPBC646.10c [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p
Length = 497
Score = 562 bits (1449), Expect = e-160
Identities = 273/428 (63%), Positives = 344/428 (79%), Gaps = 1/428 (0%)
Query: 5 EYLLFEEPTGYGIFKVKLQQDDIGSRLKEVQQQINDFGSFTKLVELVSFAPFKGAAQALE 64
+YLL+E TGY +F V + D I ++ KEVQ + D F K+V+L SF PFK AA ALE
Sbjct: 3 DYLLYESATGYSLFDV-VGADQIAAKTKEVQLSLQDISKFGKVVQLRSFIPFKNAAHALE 61
Query: 65 NANDISEGLVSEHLKALLDLNLPKGSSKKTVTLAISDKNLGPSIKEVFPFVDCISNELAQ 124
NANDISEG++++ LK L+LNLPK S KK V+L + DKNL SIK ++C ++EL Q
Sbjct: 62 NANDISEGVLNDFLKNFLELNLPKASKKKKVSLGVQDKNLATSIKSEIDAIECDTSELTQ 121
Query: 125 DLIRGVRLHGDKLLKDLQPGDLERAQLGLGHAYSRAKVKFSVQKNDNHIIQAIALLDQLD 184
DL+RG+R HGDKLLK L PGD ERAQLGLGH+YSRAKVKF+V +NDN IIQAIA+LDQLD
Sbjct: 122 DLLRGIRFHGDKLLKQLSPGDFERAQLGLGHSYSRAKVKFNVNRNDNMIIQAIAILDQLD 181
Query: 185 KDINTFAMRVKEWYGWHFPELAKLVPDNYKFAKLVLFIKDKASLNEESLHDLSEILDNDA 244
KDINTFAMR+KEWY WHFPEL+K+V DNYK+A +V + DK ++N+E LHDL+ ++D+D
Sbjct: 182 KDINTFAMRMKEWYSWHFPELSKIVGDNYKYAVIVTLVGDKTTINDEMLHDLAAVVDDDK 241
Query: 245 GISERVIDNARISMGQDLSETDMENVTIFAKRVVSLVEYRKQLYDYLCEKMHTVAPNLSE 304
I++ +I+ ++SMGQD+SE D+EN+ FA+RV+ L YRKQL++YL +KM+ VAPNL+E
Sbjct: 242 DIAQSIINAGKVSMGQDISEIDLENILSFAERVIKLSNYRKQLHNYLVQKMNVVAPNLAE 301
Query: 305 LIGEVIGARLISHSGSLTNLSKQAASTVQILGAEKALFRALKTKGNTPKYGLIYHSGFIA 364
LIGE++GARLISH+GSLTNLSK ASTVQILGAEKALFRALKT+GNTPKYG+IYHS FI
Sbjct: 302 LIGEMVGARLISHAGSLTNLSKCPASTVQILGAEKALFRALKTRGNTPKYGIIYHSSFIG 361
Query: 365 KASAKNKGRISRYLANKCSMASRIDNYSDEPSNVFGQVLKKQVEQRLEFYASGTPTLKNE 424
KA AKNKGRISR+LANKCS+ASRIDN+SD P+ FGQVL++QVE+RL F+ +G +N
Sbjct: 362 KAGAKNKGRISRFLANKCSIASRIDNFSDAPTTAFGQVLRRQVEERLNFFDTGVAPTRNS 421
Query: 425 SAIKEAIE 432
A+ EA E
Sbjct: 422 IAMAEAYE 429
>At3g12860 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p
Length = 477
Score = 471 bits (1211), Expect = e-132
Identities = 246/452 (54%), Positives = 322/452 (70%), Gaps = 11/452 (2%)
Query: 6 YLLFEEPTGYGIFKVKLQQDDIGSRLKEVQQQINDFGSFTKLVELVSFAPFKGAAQALEN 65
YLL E P+GYG+F+ D+IG + V+ ++D F ++V+L +F PF+ A AL
Sbjct: 4 YLLSESPSGYGLFEGH-GSDEIGQNTEAVRSSVSDLSRFGRVVQLTAFHPFQSALDALNQ 62
Query: 66 ANDISEGLVSEHLKALLDLNLPK--GSSKKTVTLAISDKNLGPSIKEVFPFVDCISNELA 123
N +SEG +S+ L++ L+LNLPK K +L +S+ +G I E + C SNE
Sbjct: 63 INAVSEGYMSDELRSFLELNLPKVKEGKKPKFSLGVSEPKIGSCIFEATK-IPCQSNEFV 121
Query: 124 QDLIRGVRLHGDKLLKDLQPGDLERAQLGLGHAYSRAKVKFSVQKNDNHIIQAIALLDQL 183
+L+RGVR H D+ +KDL+PGDLE+AQLGL H+YSRAKVKF+V + DN +IQAI +LD L
Sbjct: 122 HELLRGVRQHFDRFIKDLKPGDLEKAQLGLAHSYSRAKVKFNVNRVDNMVIQAIFMLDTL 181
Query: 184 DKDINTFAMRVKEWYGWHFPELAKLVPDNYKFAKLVLFIKDKASLNEESLHDLSEILDND 243
DKDIN+FAMRV+EWY WHFPEL K+V DNY +AK+ I DK+ L+EE + L+E L D
Sbjct: 182 DKDINSFAMRVREWYSWHFPELVKIVNDNYLYAKVSKIIVDKSKLSEEHIPMLTEAL-GD 240
Query: 244 AGISERVIDNARISMGQDLSETDMENVTIFAKRVVSLVEYRKQLYDYLCEKMHTVAPNLS 303
+ VI+ + SMGQDLS D+ NV FA+RV+ L +YRK+LYDYL KM +APNL+
Sbjct: 241 EDKAREVIEAGKASMGQDLSPVDLINVQTFAQRVMDLADYRKKLYDYLVTKMSDIAPNLA 300
Query: 304 ELIGEVIGARLISHSGSLTNLSKQAASTVQILGAEKALFRALKTKGNTPKYGLIYHSGFI 363
LIGE++GARLISH+GSLTNL+K +ST+QILGAEKALFRALKT+GNTPKYGLI+HS FI
Sbjct: 301 ALIGEMVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFI 360
Query: 364 AKASAKNKGRISRYLANKCSMASRIDNYSDEPSNVFGQVLKKQVEQRLEFYASGTPTLKN 423
+ASAKNKGRI+R+LANKCS+ASRID +SD + FG+ L++QVE+RL+FY G KN
Sbjct: 361 GRASAKNKGRIARFLANKCSIASRIDCFSDNSTTAFGEKLREQVEERLDFYDKGVAPRKN 420
Query: 424 ESAIKEAIELYNKDKPAHEEEVDTTEVSKKRK 455
+KE K K +EE E SKK+K
Sbjct: 421 VDVMKE------KRKTEEKEEEKEEEKSKKKK 446
>At1g56110 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p
Length = 522
Score = 466 bits (1198), Expect = e-131
Identities = 237/452 (52%), Positives = 326/452 (71%), Gaps = 5/452 (1%)
Query: 6 YLLFEEPTGYGIFKVKLQQDDIGSRLKEVQQQINDFGSFTKLVELVSFAPFKGAAQALEN 65
Y+++E +GYG+F+V D+IG + V+ ++D F ++V+L +F PF+ A AL
Sbjct: 4 YVIYESSSGYGLFEVH-GLDEIGQNTEAVRTSVSDLSRFGRVVQLTAFHPFESALDALNQ 62
Query: 66 ANDISEGLVSEHLKALLDLNLPK--GSSKKTVTLAISDKNLGPSIKEVFPFVDCISNELA 123
N +SEG++++ L++ L+LNLPK K +L +++ LG I E + C SNE
Sbjct: 63 VNAVSEGVMTDELRSFLELNLPKVKEGKKPKFSLGLAEPKLGSHIFEATK-IPCQSNEFV 121
Query: 124 QDLIRGVRLHGDKLLKDLQPGDLERAQLGLGHAYSRAKVKFSVQKNDNHIIQAIALLDQL 183
+L+RGVR H D+ +KDL+PGDLE++QLGL H+YSRAKVKF+V + DN +IQAI +LD L
Sbjct: 122 LELLRGVRQHFDRFIKDLKPGDLEKSQLGLAHSYSRAKVKFNVNRVDNMVIQAIFMLDTL 181
Query: 184 DKDINTFAMRVKEWYGWHFPELAKLVPDNYKFAKLVLFIKDKASLNEESLHDLSEILDND 243
DKDIN+FAMRV+EWY WHFPEL K+V DNY +A++ I DK+ L E+ + L+E+L D
Sbjct: 182 DKDINSFAMRVREWYSWHFPELVKIVNDNYLYARVSKMIDDKSKLTEDHIPMLTEVL-GD 240
Query: 244 AGISERVIDNARISMGQDLSETDMENVTIFAKRVVSLVEYRKQLYDYLCEKMHTVAPNLS 303
++ VI+ + SMG DLS D+ NV FA++V+ L +YRK+LYDYL KM +APNL+
Sbjct: 241 EDKAKEVIEAGKASMGSDLSPLDLINVQTFAQKVMDLADYRKKLYDYLVTKMSDIAPNLA 300
Query: 304 ELIGEVIGARLISHSGSLTNLSKQAASTVQILGAEKALFRALKTKGNTPKYGLIYHSGFI 363
LIGE++GARLISH+GSLTNL+K +ST+QILGAEKALFRALKT+GNTPKYGLI+HS FI
Sbjct: 301 ALIGEMVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFI 360
Query: 364 AKASAKNKGRISRYLANKCSMASRIDNYSDEPSNVFGQVLKKQVEQRLEFYASGTPTLKN 423
+ASAKNKGRI+RYLANKCS+ASRID ++D + FG+ L++QVE+RLEFY G KN
Sbjct: 361 GRASAKNKGRIARYLANKCSIASRIDCFADGATTAFGEKLREQVEERLEFYDKGVAPRKN 420
Query: 424 ESAIKEAIELYNKDKPAHEEEVDTTEVSKKRK 455
+KE IE +++ E + + SKK+K
Sbjct: 421 VDVMKEVIENLKQEEEGKEPVDASVKKSKKKK 452
>7300850 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p
Length = 470
Score = 443 bits (1140), Expect = e-124
Identities = 236/425 (55%), Positives = 301/425 (70%), Gaps = 9/425 (2%)
Query: 31 LKEVQQQINDFGSFTKLVELVSFAPFKGAAQALENANDISEGLVSEHLKALLDLNLPKGS 90
L +V+ + D F +V+L FAPFK A ALEN N ISEG+V + L + LD K
Sbjct: 3 LPQVESSVTDLAKFNSIVKLAGFAPFKTAIAALENINAISEGIVPQDLLSFLDDFFAK-L 61
Query: 91 SKKTVTLAISDKNLGPSIKEVFPFVDCISNELAQDLIRGVRLHGDKLLKDLQPGDLERAQ 150
KK TL I+D LG +I E V C + +++RGVR H KL+K AQ
Sbjct: 62 KKKKCTLGIADAKLGAAITEAIG-VQCSHFGVVPEILRGVRFHFAKLVKGFTDKSAGVAQ 120
Query: 151 LGLGHAYSRAKVKFSVQKNDNHIIQAIALLDQLDKDINTFAMRVKEWYGWHFPELAKLVP 210
LGLGH+YSRAKVKF+V ++DN IIQ+IALLDQLDKD+NTF+MR++EWY +HFPEL K+VP
Sbjct: 121 LGLGHSYSRAKVKFNVHRSDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVKIVP 180
Query: 211 DNYKFAKLVLFIKDKASLNEESLHDLSEILDNDAGISERVIDNARISMGQDLSETDMENV 270
DNY FAK FIKD+ +L ++ L DL +I+ D+ ++ +ID A++SMG D+S D+ N+
Sbjct: 181 DNYMFAKAAKFIKDRKNLTQDQLEDLEKIV-MDSAKAQAIIDAAKMSMGMDISIVDLMNI 239
Query: 271 TIFAKRVVSLVEYRKQLYDYLCEKMHTVAPNLSELIGEVIGARLISHSGSLTNLSKQAAS 330
+FA+RVV L EYRK+L YL KM+ VAPNL LIG+ +GARLISH+GSLTNL+K AS
Sbjct: 240 ELFAERVVKLSEYRKKLSTYLHNKMNLVAPNLQSLIGDQVGARLISHAGSLTNLAKYPAS 299
Query: 331 TVQILGAEKALFRALKTKGNTPKYGLIYHSGFIAKASAKNKGRISRYLANKCSMASRIDN 390
TVQILGAEKALFRALKT+ NTPKYGLIYHS FI +A KNKGRISR+LANKCS+ASRID
Sbjct: 300 TVQILGAEKALFRALKTRSNTPKYGLIYHSSFIGRAGLKNKGRISRFLANKCSIASRIDC 359
Query: 391 YSDEPSNVFGQVLKKQVEQRLEFYASGTPTLKNESAIKEAIELYNKDKPAHEEEVDTTEV 450
+ ++P++VFG+ LK+QVE RL+FY SG KN +KEAIE A +E T +
Sbjct: 360 FLEQPTSVFGETLKQQVEDRLKFYESGDVPRKNIEVMKEAIE------AAGQEAAITVQS 413
Query: 451 SKKRK 455
KK+K
Sbjct: 414 EKKKK 418
>CE06114 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p
Length = 486
Score = 441 bits (1134), Expect = e-123
Identities = 231/452 (51%), Positives = 313/452 (69%), Gaps = 13/452 (2%)
Query: 6 YLLFEEPTGYGIFKVKLQQDDIGSRLKEVQQQINDFGSFTKLVELVSFAPFKGAAQALEN 65
++L+E GY + K+K + DD G L+EV D F+++VEL SF PFK ALEN
Sbjct: 7 FVLYEHAAGYALMKIK-EFDDAGLILQEVDAAHADGYKFSQIVELASFDPFKNTEAALEN 65
Query: 66 ANDISEGLVSEHLKALLDLNLPKGSSKKTVTLAISDKNLGPSIKEVFPFVDCISNELAQD 125
N ISEGL L L +LPK KK V L I+D L S+ E FP + + + +
Sbjct: 66 CNSISEGLAHPDLTNFLQKSLPK--KKKHVVLGINDSKLAGSLTEAFPDLKLVFGGVITE 123
Query: 126 LIRGVRLHGDKLLKDLQPGDLERAQLGLGHAYSRAKVKFSVQKNDNHIIQAIALLDQLDK 185
++RG R+H ++L K+L L +AQL LGH+YSR+KVKF V + DN +IQ+IALLDQLDK
Sbjct: 124 ILRGTRVHFERLAKNLPHHSLSKAQLSLGHSYSRSKVKFDVHRVDNMVIQSIALLDQLDK 183
Query: 186 DINTFAMRVKEWYGWHFPELAKLVPDNYKFAKLVLFIKDKASL--NEESLHDLSEILDND 243
DIN F MR++EWY +H+PEL +L PD YK+++L + I D+ + NE +++ EILDND
Sbjct: 184 DINLFGMRIREWYSYHYPELFRLAPDQYKYSRLAVAILDRNKMAENENLENEILEILDND 243
Query: 244 AGISERVIDNARISMGQDLSETDMENVTIFAKRVVSLVEYRKQLYDYLCEKMHTVAPNLS 303
+ + ++I+ AR SMG D+S+ D+EN+ FA RV SL+EYR+QL++Y+ ++M AP+LS
Sbjct: 244 SEKTAQIIEAARTSMGMDISDLDLENIKRFAARVSSLMEYRQQLHEYIKDRMDHCAPSLS 303
Query: 304 ELIGEVIGARLISHSGSLTNLSKQAASTVQILGAEKALFRALKTKGNTPKYGLIYHSGFI 363
LIGE +GARLISH+GSLTNL+K ASTVQILGAEKALFRALKT+ NTPKYGL++HS FI
Sbjct: 304 ALIGEQVGARLISHAGSLTNLAKYPASTVQILGAEKALFRALKTRSNTPKYGLLFHSSFI 363
Query: 364 AKASAKNKGRISRYLANKCSMASRIDNYSDEPSNVFGQVLKKQVEQRLEFYASGTPTLKN 423
KA KNKGR+SRYLANKCS+A+R+D +S+ P + +G+ L++QVE RLE++ SGT KN
Sbjct: 364 GKAGTKNKGRVSRYLANKCSIAARVDCFSETPVSTYGEFLRQQVEDRLEYFTSGTVPKKN 423
Query: 424 ESAIKEAIELYNKDKPAHEEEVDTTEVSKKRK 455
+KEA E EV + KK+K
Sbjct: 424 IDVMKEAEEA--------AVEVKEKVIKKKKK 447
>Hs5453794_1 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p
Length = 498
Score = 439 bits (1129), Expect = e-123
Identities = 234/449 (52%), Positives = 317/449 (70%), Gaps = 5/449 (1%)
Query: 6 YLLFEEPTGYGIFKVKLQQDDIGSRLKEVQQQINDFGSFTKLVELVSFAPFKGAAQALEN 65
++LFE GY + +K + ++I +V++ + + G F +V LV+F PF + ALEN
Sbjct: 11 HVLFEHAVGYALVALK-EVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVALEN 69
Query: 66 ANDISEGLVSEHLKALLDLNLPKGSSKKTVTLAISDKNLGPSIKEVFPFVDCISNELAQD 125
AN +SEG+V E L+ LL+ +LP S KK V L + D +G +I+E + +C + + +
Sbjct: 70 ANAVSEGVVHEDLRLLLETHLP--SKKKKVLLGVGDPKIGAAIQEELGY-NCQTGGVIAE 126
Query: 126 LIRGVRLHGDKLLKDLQPGDLERAQLGLGHAYSRAKVKFSVQKNDNHIIQAIALLDQLDK 185
++RGVRLH L+K L +AQLGLGH+YSRAKVKF+V + DN IIQ+I+LLDQLDK
Sbjct: 127 ILRGVRLHFHNLVKGLTDLSACKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDK 186
Query: 186 DINTFAMRVKEWYGWHFPELAKLVPDNYKFAKLVLFIKDKASLNEESLHDLSEILDNDAG 245
DINTF+MRV+EWYG+HFPEL K++ DN + +L FI ++ LNE+ L L E L D
Sbjct: 187 DINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNEDKLEKLEE-LTMDGA 245
Query: 246 ISERVIDNARISMGQDLSETDMENVTIFAKRVVSLVEYRKQLYDYLCEKMHTVAPNLSEL 305
++ ++D +R SMG D+S D+ N+ F+ RVVSL EYR+ L+ YL KM VAP+LS L
Sbjct: 246 KAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSKMSQVAPSLSAL 305
Query: 306 IGEVIGARLISHSGSLTNLSKQAASTVQILGAEKALFRALKTKGNTPKYGLIYHSGFIAK 365
IGE +GARLI+H+GSLTNL+K ASTVQILGAEKALFRALKT+GNTPKYGLI+HS FI +
Sbjct: 306 IGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGR 365
Query: 366 ASAKNKGRISRYLANKCSMASRIDNYSDEPSNVFGQVLKKQVEQRLEFYASGTPTLKNES 425
A+AKNKGRISRYLANKCS+ASRID +S+ P++VFG+ L++QVE+RL FY +G KN
Sbjct: 366 AAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPRKNLD 425
Query: 426 AIKEAIELYNKDKPAHEEEVDTTEVSKKR 454
+KEA+ ++ A E + KKR
Sbjct: 426 VMKEAMVQAEAEEAAAEITRKLEKQEKKR 454
>At3g05060 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p
Length = 533
Score = 335 bits (860), Expect = 7e-92
Identities = 197/433 (45%), Positives = 271/433 (62%), Gaps = 15/433 (3%)
Query: 7 LLFEEPTGYGIFKVKLQQDDIGSRLKEVQQQINDFGSFTKLVELVSFAPFKGAAQALENA 66
+L+E G+ +FKVK + + ++++ ++ + S K+V+L +F F ++ALE
Sbjct: 4 VLYETAAGFALFKVK--DEGKMANVEDLCKEFDTPDSARKMVKLKAFEKFDNTSEALEAV 61
Query: 67 NDISEGLVSEHLKALLDLNLPKGSSKKTVTLAISDKNLGPSIKEVFPFVDCISNELAQDL 126
+ EG S+ L+ L N + TLA++D LG IKE +DCI N +L
Sbjct: 62 AKLLEGAPSKGLRKFLKANC------QGETLAVADSKLGNVIKEKLK-IDCIHNNAVMEL 114
Query: 127 IRGVRLHGDKLLKDLQPGDLERAQLGLGHAYSRAKVKFSVQKNDNHIIQAIALLDQLDKD 186
+RGVR +L+ L DL LGL H+ +R K+KFS K D IIQAI LLD LDK+
Sbjct: 115 LRGVRSQFTELISGLGDQDLAPMSLGLSHSLARYKLKFSSDKVDTMIIQAIGLLDDLDKE 174
Query: 187 INTFAMRVKEWYGWHFPELAKLVPDNYKFAKLVLFIKDKASLNEESLHDLSEILDNDAGI 246
+NT+AMRV+EWYGWHFPELAK++ DN +AK V + ++ +N L D SEIL ++ I
Sbjct: 175 LNTYAMRVREWYGWHFPELAKIISDNILYAKSVKLMGNR--VNAAKL-DFSEILADE--I 229
Query: 247 SERVIDNARISMGQDLSETDMENVTIFAKRVVSLVEYRKQLYDYLCEKMHTVAPNLSELI 306
+ D A ISMG ++S+ D+ ++ +V+SL EYR QLYDYL +M+T+APNL+ L+
Sbjct: 230 EADLKDAAVISMGTEVSDLDLLHIRELCDQVLSLSEYRAQLYDYLKSRMNTIAPNLTALV 289
Query: 307 GEVIGARLISHSGSLTNLSKQAASTVQILGAEKALFRALKTKGNTPKYGLIYHSGFIAKA 366
GE++GARLISH GSL NLSKQ STVQILGAEKALFRALKTK TPKYGLI+H+ + +A
Sbjct: 290 GELVGARLISHGGSLLNLSKQPGSTVQILGAEKALFRALKTKHATPKYGLIFHASLVGQA 349
Query: 367 SAKNKGRISRYLANKCSMASRIDNYSDEPSNVFGQVLKKQVEQRL-EFYASGTPTLKNES 425
+ K+KG+ISR LA K +A R+D D N G + ++E RL L S
Sbjct: 350 APKHKGKISRSLAAKTVLAIRVDALGDSQDNTMGLENRAKLEARLRNLEGKDLGRLSGSS 409
Query: 426 AIKEAIELYNKDK 438
K IE+YNKDK
Sbjct: 410 KGKPKIEVYNKDK 422
>SPAC23G3.06 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p
Length = 508
Score = 334 bits (856), Expect = 2e-91
Identities = 193/466 (41%), Positives = 282/466 (60%), Gaps = 28/466 (6%)
Query: 6 YLLFEEPTGYGIFKVKLQQDDIGSRLKEVQQQINDFGSFTKLVELVSFAPFKGAAQALEN 65
++L E GY IFK K D + + + + + + L++L SFA F+ AL+N
Sbjct: 2 FILTETAAGYAIFKAK---DKLLKKRDALIEDLKSPEGASNLLKLQSFAKFESTVDALDN 58
Query: 66 ANDISEGLVSEHLKALLDLNLPKGSSKKTVTLAISDKNLGPSIKEVFPF-VDCISNELAQ 124
+ + EG VS L +LL+ S K+ TL ++D LG +I ++ + IS+ Q
Sbjct: 59 VSALVEGKVSSKLSSLLE----GLSDSKSSTLVVADPKLGNAINKLPGLEFEIISDSSVQ 114
Query: 125 DLIRGVRLHGDKLLKDLQPGDLERAQLGLGHAYSRAKVKFSVQKNDNHIIQAIALLDQLD 184
DL RG+R H L+ L P DL LGL H+ SR K+KFS K D I+QAIALLD LD
Sbjct: 115 DLYRGIREHLSSLISGLAPSDLNAMSLGLSHSLSRHKLKFSPDKVDTMIVQAIALLDDLD 174
Query: 185 KDINTFAMRVKEWYGWHFPELAKLVPDNYKFAKLVLFIKDKASLNEESLHDLSEILDNDA 244
K++NT+AMRV+EWYGWHFPE+ K++ DN +A+++ + + +E D S+IL +
Sbjct: 175 KELNTYAMRVREWYGWHFPEMGKIIQDNLAYARVIKAMGMRTKCSET---DFSDILPEE- 230
Query: 245 GISERVIDNARISMGQDLSETDMENVTIFAKRVVSLVEYRKQLYDYLCEKMHTVAPNLSE 304
I + A ISMG +++E D++N+ + A +V+ L YR QL +YL +M +APNL+
Sbjct: 231 -IEATLKSAAEISMGTEITEEDLDNIVMLADQVLELASYRAQLSEYLRNRMQAIAPNLTA 289
Query: 305 LIGEVIGARLISHSGSLTNLSKQAASTVQILGAEKALFRALKTKGNTPKYGLIYHSGFIA 364
L+GE++GARLI+H+GSL NL+KQ AST+QILGAEKALFRALKTK +TPKYGLIYH+ +
Sbjct: 290 LVGELVGARLIAHAGSLMNLAKQPASTIQILGAEKALFRALKTKHSTPKYGLIYHASLVG 349
Query: 365 KASAKNKGRISRYLANKCSMASRIDNYSDE--PSNVFGQVLKKQVEQRLEFYASG----T 418
+A++KNKG+I+R LA K +++ R+D SD+ + G + +VE RL G
Sbjct: 350 QANSKNKGKIARVLATKAALSLRVDALSDKDTTNGNIGLENRIRVENRLRSLEGGKLLPL 409
Query: 419 PT---------LKNESAIKEAIELYNKDKPAHEEEVDTTEVSKKRK 455
PT + SA A + KD +E+V+ V +K+K
Sbjct: 410 PTAPVQQSKVQINGTSAYSTATDAVTKDAEESQEDVEMDIVIEKKK 455
>At5g27120 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p
Length = 533
Score = 332 bits (851), Expect = 8e-91
Identities = 199/436 (45%), Positives = 268/436 (60%), Gaps = 21/436 (4%)
Query: 7 LLFEEPTGYGIFKVKLQQDDIGSRLKEVQQQINDFGSFT---KLVELVSFAPFKGAAQAL 63
+LFE P G+ IFKV + +L V+ N+F + K+V+LV+F F A+AL
Sbjct: 3 ILFETPGGFAIFKVLNE-----GKLSNVEDLGNEFSTAKLARKMVKLVAFDKFDNTAEAL 57
Query: 64 ENANDISEGLVSEHLKALLDLNLPKGSSKKTVTLAISDKNLGPSIKEVFPFVDCISNELA 123
E + EG S+ L+ L N TLA++D LG IKE V C+ N
Sbjct: 58 EAVAKLLEGTPSKGLRKFLKANCVGE------TLAVADSKLGNIIKEKLKIV-CVHNNAV 110
Query: 124 QDLIRGVRLHGDKLLKDLQPGDLERAQLGLGHAYSRAKVKFSVQKNDNHIIQAIALLDQL 183
+L+RG+R +L+ L DL LGL H+ +R K+KFS K D IIQAI LLD L
Sbjct: 111 MELLRGIRSQLTELISGLGDQDLGPMSLGLSHSLARYKLKFSSDKVDTMIIQAIGLLDDL 170
Query: 184 DKDINTFAMRVKEWYGWHFPELAKLVPDNYKFAKLVLFIKDKASLNEESLHDLSEILDND 243
DK++NT+AMRV+EW+GWHFPELAK+V DN +AK V + ++ +N L D SEIL ++
Sbjct: 171 DKELNTYAMRVREWFGWHFPELAKIVQDNILYAKAVKLMGNR--INAAKL-DFSEILADE 227
Query: 244 AGISERVIDNARISMGQDLSETDMENVTIFAKRVVSLVEYRKQLYDYLCEKMHTVAPNLS 303
I + + A ISMG ++S+ D+ ++ +V+SL EYR QLYDYL +M+T+APNL+
Sbjct: 228 --IEAELKEAAVISMGTEVSDLDLLHIRELCDQVLSLAEYRAQLYDYLKSRMNTIAPNLT 285
Query: 304 ELIGEVIGARLISHSGSLTNLSKQAASTVQILGAEKALFRALKTKGNTPKYGLIYHSGFI 363
L+GE++GARLISH GSL NL+KQ STVQILGAEKALFRALKTK TPKYGLI+H+ +
Sbjct: 286 ALVGELVGARLISHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIFHASVV 345
Query: 364 AKASAKNKGRISRYLANKCSMASRIDNYSDEPSNVFGQVLKKQVEQRLE-FYASGTPTLK 422
+A+ KNKG+ISR LA K +A R D D N G + ++E RL L
Sbjct: 346 GQAAPKNKGKISRSLAAKSVLAIRCDALGDSQDNTMGVENRLKLEARLRTLEGKDLGRLS 405
Query: 423 NESAIKEAIELYNKDK 438
+ K IE+Y+KDK
Sbjct: 406 GSAKGKPKIEVYDKDK 421
>YOR310c [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p
Length = 511
Score = 322 bits (825), Expect = 8e-88
Identities = 182/451 (40%), Positives = 277/451 (61%), Gaps = 21/451 (4%)
Query: 6 YLLFEEPTGYGIFKVKLQQDDIGSRLKEVQQQINDFGSFTKLVE---LVSFAPFKGAAQA 62
Y+L E GY + K ++ + I D S K+++ + +F+ F AA A
Sbjct: 3 YVLTETSAGYALLKAS------DKKIYKSSSLIQDLDSSDKVLKEFKIAAFSKFNSAANA 56
Query: 63 LENANDISEGLVSEHLKALLDLNLPKGSSKKTVTLAISDKNLGPSIKEVFPFVDCISNEL 122
LE AN I EG VS L+ LL+ + K TL +S+ L +I ++ + +S+ +
Sbjct: 57 LEEANSIIEGKVSSQLEKLLE----EIKKDKKSTLIVSETKLANAINKLGLNFNVVSDAV 112
Query: 123 AQDLIRGVRLHGDKLLKDLQPGDLERAQLGLGHAYSRAKVKFSVQKNDNHIIQAIALLDQ 182
D+ R ++ + +LL + DL + LGL H+ R K+KFS K D IIQAIALLD
Sbjct: 113 TLDIYRAIKEYLPELLPGMSDNDLSKMSLGLAHSIGRHKLKFSADKVDVMIIQAIALLDD 172
Query: 183 LDKDINTFAMRVKEWYGWHFPELAKLVPDNYKFAKLVLFIKDKASLNEESLHDLSEILDN 242
LDK++NT+AMR KEWYGWHFPELAK+V D+ +A+++L + ++ +E DLSEIL
Sbjct: 173 LDKELNTYAMRCKEWYGWHFPELAKIVTDSVAYARIILTMGIRSKASET---DLSEILPE 229
Query: 243 DAGISERVIDNARISMGQDLSETDMENVTIFAKRVVSLVEYRKQLYDYLCEKMHTVAPNL 302
+ I ERV A +SMG ++++TD++N+ A+++V YR+QL +YL +M +APNL
Sbjct: 230 E--IEERVKTAAEVSMGTEITQTDLDNINALAEQIVEFAAYREQLSNYLSARMKAIAPNL 287
Query: 303 SELIGEVIGARLISHSGSLTNLSKQAASTVQILGAEKALFRALKTKGNTPKYGLIYHSGF 362
++L+GE++GARLI+HSGSL +L+K AST+QILGAEKALFRALKTK +TPKYGL+YH+
Sbjct: 288 TQLVGELVGARLIAHSGSLISLAKSPASTIQILGAEKALFRALKTKHDTPKYGLLYHASL 347
Query: 363 IAKASAKNKGRISRYLANKCSMASRIDNYSD--EPSNVFGQVLKKQVEQRLEFYASGTPT 420
+ +A+ KNKG+I+R LA K +++ R D ++ + S G + +VE RL G
Sbjct: 348 VGQATGKNKGKIARVLAAKAAVSLRYDALAEDRDDSGDIGLESRAKVENRLS-QLEGRDL 406
Query: 421 LKNESAIKEAIELYNKDKPAHEEEVDTTEVS 451
++EA ++ + A+ + DT + +
Sbjct: 407 RTTPKVVREAKKVEMTEARAYNADADTAKAA 437
>7297189 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p
Length = 454
Score = 315 bits (808), Expect = 8e-86
Identities = 179/416 (43%), Positives = 254/416 (61%), Gaps = 19/416 (4%)
Query: 6 YLLFEEPTGYGIFKV----KLQQDDIGSRLKEVQQQINDFGSFTKLVELVSFAPFKGAAQ 61
++L+E P GY IFK+ KL+Q D + E ++ N KL++L F F +
Sbjct: 2 FVLYETPAGYAIFKLLDEKKLEQVDNLYQEFETPEKAN------KLLKLKHFEKFNDTTE 55
Query: 62 ALENANDISEGLVSEHLKALLDLNLPKGSSKKTVTLAISDKNLGPSIKEVFPFVDCISNE 121
AL A EG V++ LK L L +L ++D LG +IK+ V C+ N
Sbjct: 56 ALAAATAAVEGKVAKPLKKTLKKLLVDDVQS---SLLVADAKLGTAIKDKLS-VQCVCNT 111
Query: 122 LAQDLIRGVRLHGDKLLKDLQPGDLERAQLGLGHAYSRAKVKFSVQKNDNHIIQAIALLD 181
Q+L+R +R D LL L ++ LGL H+ SR K+KFS K D I+QA LLD
Sbjct: 112 GVQELMRCIRQQADSLLGGLPKREMTAMALGLAHSLSRYKLKFSPDKIDTMIVQAQCLLD 171
Query: 182 QLDKDINTFAMRVKEWYGWHFPELAKLVPDNYKFAKLVLFIKDKASLNEESLHDLSEILD 241
LDK++N + MR +EWYGWHFPEL K++ DN F K + + + ++ + DLS+IL
Sbjct: 172 DLDKELNNYMMRAREWYGWHFPELGKIITDNIAFVKTIKLVGTRDNM---ATSDLSDILP 228
Query: 242 NDAGISERVIDNARISMGQDLSETDMENVTIFAKRVVSLVEYRKQLYDYLCEKMHTVAPN 301
D + E+V + A ISMG ++SE D+ N+ ++S+ +YR LYDYL +M +APN
Sbjct: 229 ED--VEEKVKEAAEISMGTEISEEDVLNIQCLCDEIISINDYRTHLYDYLKARMMAMAPN 286
Query: 302 LSELIGEVIGARLISHSGSLTNLSKQAASTVQILGAEKALFRALKTKGNTPKYGLIYHSG 361
L+ L+G+ +GARLI+H+GSL NL+K +STVQILGAEKALFRALKTK +TPKYGLIYH+
Sbjct: 287 LTVLVGDTVGARLIAHAGSLINLAKHPSSTVQILGAEKALFRALKTKKDTPKYGLIYHAQ 346
Query: 362 FIAKASAKNKGRISRYLANKCSMASRIDNYSDEPSNVFGQVLKKQVEQRLEFYASG 417
+ +AS KNKG++SR LA K S+A+R+D + +E + G K ++E RL G
Sbjct: 347 LVGQASQKNKGKMSRSLAAKASLATRVDAFGEEATFELGAAHKVKLESRLRLLEEG 402
>CE18307 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p
Length = 487
Score = 315 bits (807), Expect = 1e-85
Identities = 191/455 (41%), Positives = 280/455 (60%), Gaps = 25/455 (5%)
Query: 7 LLFEEPTGYGIFKVKLQQDDIGSRLKEVQQQINDFGSFTKLVE---LVSFAPFKGAAQAL 63
+LFE GY +FK+ ++ +LK V +F + K E LVSF FK A A+
Sbjct: 3 VLFEVAAGYAVFKLSNEK-----KLKNVDNIWEEFSTAEKAQENLQLVSFKKFKTTAGAV 57
Query: 64 ENANDISEGLVSEHLKALLDLNLPKGSSKKTVTLAISDKNLGPSIKEVFPFVDCISNELA 123
E ++I+EG +S+ LK LL K S +T LA+ D LG IKE ++C+ +
Sbjct: 58 EATSEITEGKLSKTLKKLL-----KSSVDETEKLAVGDAKLGNLIKEKLS-LNCVHDSSI 111
Query: 124 QDLIRGVRLHGDKLLKDLQPGDLERAQLGLGHAYSRAKVKFSVQKNDNHIIQAIALLDQL 183
+L+RGVR H + LL + + ++ L + H+ +R KVKF+ +K D I+QA++LLD L
Sbjct: 112 NELMRGVRAHIEDLLAEHKE-EMNAMNLAVAHSLARYKVKFNPEKIDTMIVQAVSLLDDL 170
Query: 184 DKDINTFAMRVKEWYGWHFPELAKLVPDNYKFAKLVLFIKDKASLNEESLH-DLSEILDN 242
DK++N + MRV+EWYGWHFPEL K + D+ +AK++ I + + ++ DLS IL
Sbjct: 171 DKELNNYVMRVREWYGWHFPELGKTIQDHQAYAKIIKAI----GMRQNCINTDLSSILPE 226
Query: 243 DAGISERVIDNARISMGQDLSETDMENVTIFAKRVVSLVEYRKQLYDYLCEKMHTVAPNL 302
+ + E+V ++A ISMG D+S+ D+ ++ +V+ L YR QL+DYL +M +APNL
Sbjct: 227 E--LEEKVKEDAEISMGTDISDIDLIHIKGLCDQVIELSAYRAQLFDYLKNRMTALAPNL 284
Query: 303 SELIGEVIGARLISHSGSLTNLSKQAASTVQILGAEKALFRALKTKGNTPKYGLIYHSGF 362
+ L+GE++GARLISH+GSL +L+K AST+QILGAEKALFRALKTK +TPKYGLIYH+
Sbjct: 285 TVLLGELVGARLISHAGSLVSLAKAPASTIQILGAEKALFRALKTKKDTPKYGLIYHAQL 344
Query: 363 IAKASAKNKGRISRYLANKCSMASRIDNYSDE-PSNVFGQVLKKQVEQRLEFYASGTPTL 421
I +A K KG+++R LA KCS+A+RID SDE +N G + +E L + P+
Sbjct: 345 ITQAPPKVKGKMARKLAAKCSLATRIDALSDESATNEIGIECRAALENVLRTESERGPS- 403
Query: 422 KNESAIKEAIELYNKDKPAHEEEVDT-TEVSKKRK 455
KN+S + Y +E + T S+K K
Sbjct: 404 KNKSFGSHRHDKYEFKSETYEYDASADTPASRKHK 438
>Hs7706254 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p
Length = 529
Score = 305 bits (782), Expect = 8e-83
Identities = 185/466 (39%), Positives = 274/466 (58%), Gaps = 39/466 (8%)
Query: 7 LLFEEPTGYGIFKV----KLQQDDIGSRLKEVQQQINDFGSFTKLVELVSFAPFKGAAQA 62
+LFE GY IFKV KLQ+ D + E ++ N K+V+L F F+ A+A
Sbjct: 3 VLFETSVGYAIFKVLNEKKLQEVDSLWKEFETPEKAN------KIVKLKHFEKFQDTAEA 56
Query: 63 LENANDISEGLVSEHLKALLDLNLPKGSSKKTVTLAISDKNLGPSIKEVFPFVDCISNEL 122
L + EG +++ LK +L + + LA++D LG IKE + CI + +
Sbjct: 57 LAAFTALMEGKINKQLKKVLKKIVKEAHEP----LAVADAKLGGVIKEKLN-LSCIHSPV 111
Query: 123 AQDLIRGVRLHGDKLLKDLQPGDLERAQLGLGHAYSRAKVKFSVQKNDNHIIQAIALLDQ 182
+L+RG+R D L+ ++P ++ LGL H+ SR ++KFS K D I+QAI+LLD
Sbjct: 112 VNELMRGIRSQMDGLIPGVEPREMAAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDD 171
Query: 183 LDKDINTFAMRVKEWYGWHFPELAKLVPDNYKFAKLVLFIKDKASLNEESLHDLSEILDN 242
LDK++N + MR +EWYGWHFPEL K++ DN + K + + D+ + L SE+L
Sbjct: 172 LDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASAKL---SELLPE 228
Query: 243 DAGISERVIDNARISMGQDLSETDMENVTIFAKRVVSLVEYRKQLYDYLCEKMHTVAPNL 302
+ + V A ISMG ++SE D+ N+ +V+ + EYR QLY+YL +M +APN+
Sbjct: 229 E--VEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNV 286
Query: 303 SELIGEVIGARLISHSGSLTNLSKQAASTVQILGAEKALFRALKTKGNTPKYGLIYHSGF 362
+ ++GE++GARLI+H+GSL NL+K AASTVQILGAEKALFRALK++ +TPKYGLIYH+
Sbjct: 287 TVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASL 346
Query: 363 IAKASAKNKGRISRYLANKCSMASRIDNYSDEPSNVFGQVLKKQVEQRLEFYASGTPTLK 422
+ + S K+KG+ISR LA K +A R D + ++ S+ G + ++E RL TL+
Sbjct: 347 VGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLR-------TLE 399
Query: 423 NESAIK---EAIELYNKDKPAHEEEVDTTE---------VSKKRKL 456
+ K L +K H+ EV T + SKKRK+
Sbjct: 400 DRGIRKISGTGKALAKTEKYEHKSEVKTYDPSGDSTLPTCSKKRKI 445
>ECU09g1600 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p
Length = 492
Score = 254 bits (650), Expect = 2e-67
Identities = 160/444 (36%), Positives = 262/444 (58%), Gaps = 48/444 (10%)
Query: 4 IEYLLFEEPTGYGIFKVKLQQDDIGSRLKEVQQQINDFGSFTKLVELVSFAP---FKGAA 60
+E+LLFE GYG+F ++ +D + + +TKL +++SF F G +
Sbjct: 1 MEHLLFEYAGGYGLFVLREHED----------MSRSTYDDYTKLTQVLSFKSGMRFSGLS 50
Query: 61 QALENANDISEGLVSEHLKALLDLNLPK-----GSSKKTVTLAISDKNLGPSIKEVFPFV 115
ALE+ +S G + E L+ L+ N K GS +K +++ LG KE
Sbjct: 51 DALEHLRCLSRGEIHEDLRKFLEFNCVKVLHCDGSLRKGLSM------LGIEQKE----- 99
Query: 116 DCISNELAQDLIRGVRLHGDKLLKDLQPGDLERAQLGLGHAYSRAKVKFSVQKNDNHIIQ 175
+++++RGVR KL+K L D ++ LGL + YSR KV+++V++ D +I
Sbjct: 100 -------SENVMRGVRKAFGKLMK-LDEYDGKQMILGLAYGYSREKVEYNVKREDFIVIN 151
Query: 176 AIALLDQLDKDINTFAMRVKEWYGWHFPELAKLVPDNYKFAKLVLFIKDKASLNEESLHD 235
+ LL+Q+DKDIN+++MR++E YGW FPEL++ + DN ++ ++V + +NEE +
Sbjct: 152 TVMLLEQVDKDINSYSMRIREIYGWVFPELSRALKDNREYIEVV-----RCFVNEEVGKE 206
Query: 236 LSEILDNDAGIS-ERVIDNARI---SMGQDLSETDMENVTIFAKRVVSLVEYRKQLYDYL 291
+ LD G+S ER+ + + SMG LS DM N+ + V VE R+ L YL
Sbjct: 207 DGKWLD--LGVSGERLTEIKEMKKNSMGTKLSPADMTNLRKLIEIVSDKVEVRENLSGYL 264
Query: 292 CEKMHTVAPNLSELIGEVIGARLISHSGSLTNLSKQAASTVQILGAEKALFRALKTKGNT 351
+KM ++APNL+ ++G+V+ ARLIS +G L NL+K AST Q+ GAEK+LFR+LK K T
Sbjct: 265 KDKMSSIAPNLATILGDVLAARLISQAGGLLNLAKAPASTFQLFGAEKSLFRSLKMKKKT 324
Query: 352 PKYGLIYHSGFIAKASAKNKGRISRYLANKCSMASRIDNYSDEPSNVFGQVLKKQVEQRL 411
PKYGLIY S ++++A ++KGRISRY+A KCS+A++ID +S + + +G LK +++++
Sbjct: 325 PKYGLIYTSSYLSRARDEDKGRISRYIATKCSIAAKIDCFSKDRTPHYGIELKLLIDKKI 384
Query: 412 EFYASGTPTLKNESAIKEAIELYN 435
+ + + + ++ + N
Sbjct: 385 QSLHTDEEVERTSTVVQRVFDRIN 408
>At5g27140 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p
Length = 445
Score = 242 bits (617), Expect = 1e-63
Identities = 159/408 (38%), Positives = 234/408 (56%), Gaps = 18/408 (4%)
Query: 53 FAPFKGAAQA-LENANDISEGLVSEHLKALLDLN-LPKGSSKKTVTLAISDKNLGPSIKE 110
FA FK + L N D+ S + L+ K + LA++D LG I E
Sbjct: 11 FALFKVLDEGKLSNVEDLGTEFYSAESARRMGLHKFLKNNCDDGEILAVADPKLGDIITE 70
Query: 111 VFPFVDCISNELAQDLIRGVRLHGDKLLKDLQPGDLERAQLGLGHAYSRAKVKFSVQKND 170
++C+ N+ +L+RGVR +LL L DL L L H +R K+K + K
Sbjct: 71 KLD-IECVHNDAVMELLRGVRSQLTELLSGLDDNDLAPVSLELSHILARYKLKITSDKT- 128
Query: 171 NHIIQAIALLDQLDKDINTFAMRVKEWYGWHFPELAKLVPDNYKFAKLVLFIKDKASLNE 230
II +I+LLD LDK++NT+ V E YG HFPELA +V DN +AK+V + ++ +N
Sbjct: 129 -MIILSISLLDDLDKELNTYTTSVCELYGLHFPELANIVQDNILYAKVVKLMGNR--INA 185
Query: 231 ESLHDLSEILDNDAGISERVIDNARISMGQDLSETDMENVTIFAKRVVSLVEYRKQLYDY 290
+L D SEIL ++ + + + + +S ++S+ D+ ++ +V+S+ E + L D
Sbjct: 186 ATL-DFSEILADE--VEAELKEASMVSTRTEVSDLDLMHIQELCDQVLSIAEDKTLLCDD 242
Query: 291 LCEKMHTVAPNLSELIGEVIGARLISHSGSLTNLSKQAASTVQILGAEKALFRALKTKGN 350
L KM+ +APNL+ L+GE++GARLISH GSL NLSK ST+QILGAEK L++ALKTK
Sbjct: 243 LKNKMNKIAPNLTALVGELVGARLISHCGSLWNLSKLPWSTIQILGAEKTLYKALKTKQA 302
Query: 351 TPKYGLIYHSGFIAKASAKNKGRISRYLANKCSMASRIDNYSDEPSNVFGQVLKKQVEQR 410
TPKYGLIYH+ + +A+ +NKG+I+R LA K ++A R D + + N G + ++E R
Sbjct: 303 TPKYGLIYHAPLVRQAAPENKGKIARSLAAKSALAIRCDAFGNGQDNTMGVESRLKLEAR 362
Query: 411 LEFYASGTPTLKNESAIKEAIELYNKD---KPAHEEEVDTTEVSKKRK 455
L G + A +E E+ +KD + EEE T E SKKRK
Sbjct: 363 LRNLEGG-----DLGACEEEEEVNDKDTKKEADDEEEPKTEECSKKRK 405
>ECU04g0820 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p
Length = 413
Score = 225 bits (573), Expect = 1e-58
Identities = 128/365 (35%), Positives = 220/365 (60%), Gaps = 13/365 (3%)
Query: 49 ELVSFAPFKGAAQALENANDISEGLVSEHLKALLDLNLPKGSSKKTVTLAISDKNL-GPS 107
++V F +ALE++ ++ G V +L++ + L K TL ++D+ L P
Sbjct: 24 QVVEIYKFGSIEEALESSTLLARGEVPSNLESFMRLVEVKSKE----TLVVNDQKLVEPL 79
Query: 108 IKEVFPFVDCISNELAQDLIRGVRLHGDKLLKDLQPGDLERAQLGLGHAYSRAKVKFSVQ 167
K++ V + + + + + V + + + L L H S KV +
Sbjct: 80 EKKLSRKVVYLHDSVQRSMRSCVHEYFG-----MNSSEYSERILCLAHKISMGKVNLVPE 134
Query: 168 KNDNHIIQAIALLDQLDKDINTFAMRVKEWYGWHFPELAKLVPDNYKFAKLVLFIKDKAS 227
K D +IQ+++LLD +D+DIN MR+KEWYG+HFPEL+ + +N K+ LV+ I K
Sbjct: 135 KIDTIVIQSVSLLDDMDRDINLHCMRLKEWYGFHFPELSSVTDNNRKYLDLVVAIGRKGR 194
Query: 228 LNEESLHDLSEILDNDAGISERVIDNARISMGQDLSETDMENVTIFAKRVVSLVEYRKQL 287
+ EE + E++ + E+V+ A SMG + E+D+ N+ AK V+ E+R +L
Sbjct: 195 IGEEKKEMIREVIGDGC---EKVMRLAETSMGVMMEESDILNIVEDAKSVLRSFEFRDEL 251
Query: 288 YDYLCEKMHTVAPNLSELIGEVIGARLISHSGSLTNLSKQAASTVQILGAEKALFRALKT 347
+Y+ KM +AP+L+ L+GEVIG R+IS +GSL+NL+K S++Q++GAEKALF+ALK+
Sbjct: 252 LEYIRVKMEGLAPSLTALVGEVIGGRMISKAGSLSNLAKMPGSSIQMMGAEKALFQALKS 311
Query: 348 KGNTPKYGLIYHSGFIAKASAKNKGRISRYLANKCSMASRIDNYSDEPSNVFGQVLKKQV 407
+ NTPKYG+IY + + +++KG+I+R LA+K ++A+RID+Y +E + G +++++
Sbjct: 312 RTNTPKYGIIYGCSLLGQVPSQHKGKIARSLASKIAIAARIDSYGEESTGEIGVKMREKI 371
Query: 408 EQRLE 412
E+R++
Sbjct: 372 EKRIK 376
>Hs7661654 [A] KOG2574 mRNA splicing factor PRP31
Length = 499
Score = 115 bits (288), Expect = 2e-25
Identities = 76/289 (26%), Positives = 141/289 (48%), Gaps = 15/289 (5%)
Query: 173 IIQAIALLDQLDKDINTFAMRVKEWYGWHFPELAKLVPDNYKFAKLVLFIK---DKASLN 229
I+ A L +++ ++N +++ Y FPEL LVP+ + + V + DK N
Sbjct: 93 IVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNN 152
Query: 230 EESLHDLSEILDNDAGISERVIDNARISMGQDLSETDMENVTIFAKRVVSLVEYRKQLYD 289
E +L +IL N + V A + GQ LSE ++E + + L + ++Y+
Sbjct: 153 E----NLQQILTNATIMVVSV--TASTTQGQQLSEEELERLEEACDMALELNASKHRIYE 206
Query: 290 YLCEKMHTVAPNLSELIGEVIGARLISHSGSLTNLSKQAASTVQILGAEKALFRALKTKG 349
Y+ +M +APNLS +IG A+++ +G LTNLSK A + +LGA++ +
Sbjct: 207 YVESRMSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKVPACNIMLLGAQRKTLSGFSSTS 266
Query: 350 NTPKYGLIYHSGFIAKASAKNKGRISRYLANKCSMASRIDNYSDEPSNVFGQVLKKQVEQ 409
P G IYHS + + + +R +A KC++A+R+D++ + G LK ++E+
Sbjct: 267 VLPHTGYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIER 326
Query: 410 RLEFYASGTPTLKNESAIKEAIELYNKDKPAH-----EEEVDTTEVSKK 453
+ + + P +K + ++ K + +E + TE+ K+
Sbjct: 327 KFDKWQE-PPPVKQVKPLPAPLDGQRKKRGGRRYRKMKERLGLTEIRKQ 374
>Hs17448109_1 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p
Length = 104
Score = 100 bits (248), Expect = 7e-21
Identities = 49/96 (51%), Positives = 70/96 (72%), Gaps = 2/96 (2%)
Query: 347 TKGNTPKYGLIYHSGFIAKASAKNKGRISRYLANKCSMASRIDNYSDEPSNVFGQVLKKQ 406
TKGNTPKYGL++HS F +A+A+NKGRIS+YLANKCS+AS+ID +++ ++FG+ L++Q
Sbjct: 2 TKGNTPKYGLVFHSTFTGQAAARNKGRISQYLANKCSIASQIDCFAEVLMSIFGEKLQEQ 61
Query: 407 VEQRLEFYASGTPTLKNESAIKEAIELYNKDKPAHE 442
VE+RL FY +G K +K E+ +K A E
Sbjct: 62 VEERLSFYETGEILSKKMDVMK--TEMVQAEKTAAE 95
>SPBC119.13c [A] KOG2574 mRNA splicing factor PRP31
Length = 518
Score = 99.0 bits (245), Expect = 2e-20
Identities = 63/240 (26%), Positives = 117/240 (48%), Gaps = 6/240 (2%)
Query: 173 IIQAIALLDQLDKDINTFAMRVKEWYGWHFPELAKLVPDNYKFAKLVLFIKDKASLNEES 232
I+ + ++ ++D +I VKEWY FPEL+ LV + + + K V + + ++
Sbjct: 120 IVDSNSIAMEIDDEILRLHRLVKEWYHDRFPELSSLVLNAFDYCKTVSSLLNDLDNSKTK 179
Query: 233 LHDLSEILDNDAGISERVIDNARISMGQDLSETDMENVTIFAKRVVSLVEYRKQLYDYLC 292
L L + + A ++G+ L + ++NV + + L E ++++ +Y+
Sbjct: 180 LSFLP------SATVMVIATTATTTVGKPLPDEMIKNVKNCCEAIQQLGEEKQKIIEYVQ 233
Query: 293 EKMHTVAPNLSELIGEVIGARLISHSGSLTNLSKQAASTVQILGAEKALFRALKTKGNTP 352
++ VAPNLS ++G A LI +G LT L K A + LG + + +
Sbjct: 234 SRISVVAPNLSAVVGSTTAANLIGIAGGLTRLGKFPACNLPALGKRRLTTIGINNPAVSG 293
Query: 353 KYGLIYHSGFIAKASAKNKGRISRYLANKCSMASRIDNYSDEPSNVFGQVLKKQVEQRLE 412
YG +Y S + K + + R A K ++A+RID+ + P FG +K+VE+++E
Sbjct: 294 DYGFLYMSEIVQKTPPDVRKQAIRMTAAKVALAARIDSIHEYPDGSFGISARKEVERKIE 353
>7294306 [A] KOG2574 mRNA splicing factor PRP31
Length = 501
Score = 91.7 bits (226), Expect = 2e-18
Identities = 62/247 (25%), Positives = 117/247 (47%), Gaps = 17/247 (6%)
Query: 173 IIQAIALLDQLDKDINTFAMRVKEWYGWHFPELAKLVPDNYKFAKLVLFIKDKASLNEES 232
I+ A A+ +D +I+ KE Y FPEL L+ ++ V +E
Sbjct: 101 IVDANAIAVDIDNEISIVHKFTKEKYQKRFPELDSLIVGEIEYLLAV----------KEL 150
Query: 233 LHDLSEILDND---AGISERVID----NARISMGQDLSETDMENVTIFAKRVVSLVEYRK 285
+DL ++ +N+ A +++ I A + G L+ + + + + L ++
Sbjct: 151 GNDLDQVKNNEKLQAILTQATIMIVSVTASTTQGTMLTPAEKAKIDEACEMAIELNNFKS 210
Query: 286 QLYDYLCEKMHTVAPNLSELIGEVIGARLISHSGSLTNLSKQAASTVQILGAEKALFRAL 345
++Y+Y+ +M +APNLS ++G A+L+ +G L+ LSK A VQ+LGA+K
Sbjct: 211 KIYEYVESRMTFIAPNLSMIVGASTAAKLLGIAGGLSKLSKMPACNVQVLGAQKKTLSGF 270
Query: 346 KTKGNTPKYGLIYHSGFIAKASAKNKGRISRYLANKCSMASRIDNYSDEPSNVFGQVLKK 405
P G +Y+S + + + + +R +A K +A+R+D + G K+
Sbjct: 271 SQTQMLPHTGYVYYSQIVQDTAPDLRRKAARLVAAKSVLAARVDACHESVHGEIGLRFKE 330
Query: 406 QVEQRLE 412
VE++L+
Sbjct: 331 DVEKKLD 337
>At1g60170 [A] KOG2574 mRNA splicing factor PRP31
Length = 511
Score = 86.3 bits (212), Expect = 1e-16
Identities = 57/226 (25%), Positives = 112/226 (49%), Gaps = 5/226 (2%)
Query: 194 VKEWYGWHFPELAKLVPDNYKFAKLVLFIKDKASLNEESLHDLSEILDNDAGISERVIDN 253
+K+ Y F EL LV +A +V I ++ L +L DL+++L + I V
Sbjct: 143 IKDKYKLKFQELESLVHHPIDYACVVKKIGNETDL---ALVDLADLLPS--AIIMVVSVT 197
Query: 254 ARISMGQDLSETDMENVTIFAKRVVSLVEYRKQLYDYLCEKMHTVAPNLSELIGEVIGAR 313
A + G L E ++ V R + L RK++ +++ KM ++APNLS ++G + A+
Sbjct: 198 ALTTKGSALPEDVLQKVLEACDRALDLDSARKKVLEFVESKMGSIAPNLSAIVGSAVAAK 257
Query: 314 LISHSGSLTNLSKQAASTVQILGAEKALFRALKTKGNTPKYGLIYHSGFIAKASAKNKGR 373
L+ +G L+ L+K A VQ+LG ++ + + + G + + + R
Sbjct: 258 LMGTAGGLSALAKMPACNVQVLGHKRKNLAGFSSATSQSRVGYLEQTEIYQSTPPGLQAR 317
Query: 374 ISRYLANKCSMASRIDNYSDEPSNVFGQVLKKQVEQRLEFYASGTP 419
R +A K ++A+R+D +P + G+ ++++ +++E + P
Sbjct: 318 AGRLVAAKSTLAARVDATRGDPLGISGKAFREEIRKKIEKWQEPPP 363
>CE24126 [A] KOG2574 mRNA splicing factor PRP31
Length = 504
Score = 82.8 bits (203), Expect = 1e-15
Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 3/256 (1%)
Query: 173 IIQAIALLDQLDKDINTFAMRVKEWYGWHFPELAKLVPDNYKFAKLVLFIKDKASLNEES 232
I++ + +D +IN V++ Y FPEL LVP+ + V + ++ + ++
Sbjct: 102 IVKLSHVAADIDNEINVIHKFVRDKYEKRFPELETLVPNALTYLATVQLLGNEIN-SKVV 160
Query: 233 LHDLSEILDNDAGISERVIDNARISMGQDLSETDMENVTIFAKRVVSLVEYRKQLYDYLC 292
L ILD A V + G L ++E V L R +++ +
Sbjct: 161 KEQLGGILD--ASTCMVVSVTVSTTQGVKLEPNELETVMDACNLAAQLHVNRLEMHQLVE 218
Query: 293 EKMHTVAPNLSELIGEVIGARLISHSGSLTNLSKQAASTVQILGAEKALFRALKTKGNTP 352
+M +APNL L+G A L+S +G L+ L+ + VQ+LG K T P
Sbjct: 219 WRMALIAPNLVALLGSTTTAHLVSQAGGLSPLATMPSCNVQVLGKTKKNLIGFSTVSTNP 278
Query: 353 KYGLIYHSGFIAKASAKNKGRISRYLANKCSMASRIDNYSDEPSNVFGQVLKKQVEQRLE 412
+G IY + K K + ++ LA K ++ +RID + + G VE + E
Sbjct: 279 HHGFIYFHQLVQKMPPDLKNKAAKILAAKVTLVARIDAQHESSNGEKGAEFLALVESKFE 338
Query: 413 FYASGTPTLKNESAIK 428
P N++ K
Sbjct: 339 KMLEPPPVKANKALPK 354
>YGR091w [A] KOG2574 mRNA splicing factor PRP31
Length = 494
Score = 68.2 bits (165), Expect = 3e-11
Identities = 50/201 (24%), Positives = 98/201 (47%), Gaps = 12/201 (5%)
Query: 198 YGWHFPELAKLVPDNYKFAKLVLFIKDKASLNEESLHDLSEILDNDAGISERVIDNARIS 257
Y FPEL+ L+P +++K++ ++++ ES +L L+N A ++ I ++
Sbjct: 120 YSRRFPELSSLIPSPLQYSKVISILENENYSKNES-DELFFHLENKAKLTREQI--LVLT 176
Query: 258 MGQDLSETDMENVTIFAKRVV--------SLVEYRKQLYDYLCEKMHTVAPNLSELIGEV 309
M S + E + I + + +L + ++ + Y+ K+ +APN+ L+G
Sbjct: 177 MSMKTSFKNKEPLDIKTRTQILEANSILENLWKLQEDIGQYIASKISIIAPNVCFLVGPE 236
Query: 310 IGARLISHSGSLTNLSKQAASTVQILGAEKALFRALKT-KGNTPKYGLIYHSGFIAKASA 368
I A+LI+H+G + S+ + + +G K L L T + + G ++ S I K
Sbjct: 237 IAAQLIAHAGGVLEFSRIPSCNIASIGKNKHLSHELHTLESGVRQEGYLFASDMIQKFPV 296
Query: 369 KNKGRISRYLANKCSMASRID 389
++ R L K S+A+R+D
Sbjct: 297 SVHKQMLRMLCAKVSLAARVD 317
>At3g60610 [A] KOG2574 mRNA splicing factor PRP31
Length = 442
Score = 67.8 bits (164), Expect = 4e-11
Identities = 44/199 (22%), Positives = 95/199 (47%), Gaps = 5/199 (2%)
Query: 221 FIKDKASLNEESLHDLSEILDNDAGISERVIDNARISMGQDLSETDMENVTIFAKRVVSL 280
FIK+K L + L L + A + +++ + +++ D + D+ I A V +
Sbjct: 106 FIKEKYKLRFQELESLVHHPIDYACVVKKIGNETDLTL-VDFAGLDLTPAIIMAISVTAS 164
Query: 281 VEYRKQLYDYLCEKMHTVAPNLSELIGEVIGARLISHSGSLTNLSKQAASTVQILGAEKA 340
L E M ++APNLS ++G + A+L+ +G L+ L+K A VQ+LG ++
Sbjct: 165 TTKGSALP----EDMGSIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQVLGHKRK 220
Query: 341 LFRALKTKGNTPKYGLIYHSGFIAKASAKNKGRISRYLANKCSMASRIDNYSDEPSNVFG 400
+ + + G + + + R R +A K ++A+R+D ++P + G
Sbjct: 221 NLVGFSSATSQSRVGYLEQTEIFQSTPPGLEARAGRLVAAKSTLAARVDATREDPLGISG 280
Query: 401 QVLKKQVEQRLEFYASGTP 419
+ ++++ ++++ + P
Sbjct: 281 KAFREEIRKKIDKWQEPPP 299
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.134 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,455,761
Number of Sequences: 60738
Number of extensions: 1042843
Number of successful extensions: 3408
Number of sequences better than 1.0e-05: 25
Number of HSP's better than 0.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3328
Number of HSP's gapped (non-prelim): 31
length of query: 513
length of database: 30,389,216
effective HSP length: 111
effective length of query: 402
effective length of database: 23,647,298
effective search space: 9506213796
effective search space used: 9506213796
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)