ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV3115 good F KOG3347 Nucleotide transport and metabolism Predicted nucleotide kinase/nuclear protein involved oxidative stress response
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV3115 1054776 1054144 -211
(211 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDL166c [F] KOG3347 Predicted nucleotide kinase/nuclear protein ... 236 1e-62
Hs7706212 [F] KOG3347 Predicted nucleotide kinase/nuclear protei... 132 4e-31
SPCC830.11c [F] KOG3347 Predicted nucleotide kinase/nuclear prot... 123 2e-28
CE28286 [F] KOG3347 Predicted nucleotide kinase/nuclear protein ... 117 1e-26
7303434 [F] KOG3347 Predicted nucleotide kinase/nuclear protein ... 114 1e-25
At5g60340_1 [F] KOG3347 Predicted nucleotide kinase/nuclear prot... 72 6e-13
ECU10g0960 [F] KOG3347 Predicted nucleotide kinase/nuclear prote... 56 4e-08
>YDL166c [F] KOG3347 Predicted nucleotide kinase/nuclear protein involved
oxidative stress response
Length = 197
Score = 236 bits (603), Expect = 1e-62
Identities = 111/182 (60%), Positives = 135/182 (73%)
Query: 1 MEPVRFKPNIIVSGTPGCGKSTTCELLSRRLPEYTYYNISDFAKEHDCYDGYDDARKSNI 60
ME R+ PNIIV+GTPGCGKS+TCE L +L +Y YYNISDFAK++DC++GYD+ RKS+I
Sbjct: 1 MEARRYGPNIIVTGTPGCGKSSTCEFLKNKLKDYKYYNISDFAKDNDCFEGYDEGRKSHI 60
Query: 61 VXXXXXXXXXXXXXRKGGCIIDWHVNDVFPERXXXXXXXXRCDNGILYDRLNKRGYHNAK 120
V R+G I+DWHVNDVFPER RCDN LY RL+ RGYH++K
Sbjct: 61 VDEDKLLDMLEPLLRQGNSIVDWHVNDVFPERLIDLVVVLRCDNSNLYSRLHARGYHDSK 120
Query: 121 IEENMDAEIMGVVLQDAHDSYAQEIVVELQSDTTEEMDKNVDRIIAWQEIWLKQHKKGVT 180
IEEN+DAEIMGVV QDA +SY IVVELQSDT E+M NV RI+AW+++WL+QH GVT
Sbjct: 121 IEENLDAEIMGVVKQDAVESYEPHIVVELQSDTKEDMVSNVSRIVAWEKMWLEQHPDGVT 180
Query: 181 NE 182
NE
Sbjct: 181 NE 182
>Hs7706212 [F] KOG3347 Predicted nucleotide kinase/nuclear protein involved
oxidative stress response
Length = 172
Score = 132 bits (331), Expect = 4e-31
Identities = 66/168 (39%), Positives = 97/168 (57%), Gaps = 1/168 (0%)
Query: 8 PNIIVSGTPGCGKSTTCELLSRRLPEYTYYNISDFAKEHDCYDGYDDARKSNIVXXXXXX 67
PNI+++GTPG GK+T + L+ + Y N+ D A+E YDGYD+ I+
Sbjct: 4 PNILLTGTPGVGKTTLGKELASK-SGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVV 62
Query: 68 XXXXXXXRKGGCIIDWHVNDVFPERXXXXXXXXRCDNGILYDRLNKRGYHNAKIEENMDA 127
R+GG I+D+H D FPER R D +LY+RL RGY+ K+ +N+
Sbjct: 63 DELDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNIQC 122
Query: 128 EIMGVVLQDAHDSYAQEIVVELQSDTTEEMDKNVDRIIAWQEIWLKQH 175
EI V+ ++A SY +EIV +L S+ EE++ NVD+I+ W E W+K H
Sbjct: 123 EIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQILKWIEQWIKDH 170
>SPCC830.11c [F] KOG3347 Predicted nucleotide kinase/nuclear protein involved
oxidative stress response
Length = 175
Score = 123 bits (308), Expect = 2e-28
Identities = 67/168 (39%), Positives = 92/168 (53%), Gaps = 1/168 (0%)
Query: 8 PNIIVSGTPGCGKSTTCELLSRRLPEYTYYNISDFAKEHDCYDGYDDARKSNIVXXXXXX 67
PNII+ GTPG GK+T E ++ E I D KE+ + G+D+ K+ V
Sbjct: 9 PNIIICGTPGTGKTTLAEQVAETT-ELENICIGDVVKENHLHFGFDEKWKTYDVDEDKVL 67
Query: 68 XXXXXXXRKGGCIIDWHVNDVFPERXXXXXXXXRCDNGILYDRLNKRGYHNAKIEENMDA 127
KGGCIIDWH +F E R D+ L++RL RGY KI+EN +A
Sbjct: 68 DYLEPKLLKGGCIIDWHTCGLFSEELIDLVVVLRTDHSKLWERLESRGYSLEKIQENNEA 127
Query: 128 EIMGVVLQDAHDSYAQEIVVELQSDTTEEMDKNVDRIIAWQEIWLKQH 175
EIM + L++A +S+ +IVVEL S++ EEM+ N+ RI W W K H
Sbjct: 128 EIMQICLEEARESFDPKIVVELPSESIEEMESNLSRITQWVTNWKKNH 175
>CE28286 [F] KOG3347 Predicted nucleotide kinase/nuclear protein involved
oxidative stress response
Length = 182
Score = 117 bits (292), Expect = 1e-26
Identities = 59/162 (36%), Positives = 99/162 (60%), Gaps = 3/162 (1%)
Query: 5 RFKPNIIVSGTPGCGKSTTCELLSRRLPEYTYYNISDFAKEHDCYDGYDDARKSNIVXXX 64
R +PNI+V+G+PG GKST + ++ +L + + +S +E++ +D+ +++
Sbjct: 7 RRRPNILVTGSPGTGKSTLGQQVAEKLG-FVFIEVSKEVRENNLQGDFDEQYNCHVLDED 65
Query: 65 XXXXXXXXX--XRKGGCIIDWHVNDVFPERXXXXXXXXRCDNGILYDRLNKRGYHNAKIE 122
+GG ++D+H D+FPER RC LYDRL RGY KI+
Sbjct: 66 KLLDHISDRLDSDEGGIVVDYHGCDLFPERWFDVVVVLRCPTEKLYDRLQSRGYSEFKIK 125
Query: 123 ENMDAEIMGVVLQDAHDSYAQEIVVELQSDTTEEMDKNVDRI 164
EN++ EI G +L++A +SY+++IV ELQS+TTE+M++N++RI
Sbjct: 126 ENVECEIFGTLLEEARESYSEDIVHELQSETTEQMEENLERI 167
>7303434 [F] KOG3347 Predicted nucleotide kinase/nuclear protein involved
oxidative stress response
Length = 175
Score = 114 bits (284), Expect = 1e-25
Identities = 56/168 (33%), Positives = 90/168 (53%), Gaps = 1/168 (0%)
Query: 7 KPNIIVSGTPGCGKSTTCELLSRRLPEYTYYNISDFAKEHDCYDGYDDARKSNIVXXXXX 66
KPNI+++GTPG GKS CE ++ L ++ + + S AKE + + YD+ I+
Sbjct: 9 KPNILITGTPGAGKSYLCERIASEL-KFEWLDCSKIAKEKNFVEEYDEEYDCPILDEEKL 67
Query: 67 XXXXXXXXRKGGCIIDWHVNDVFPERXXXXXXXXRCDNGILYDRLNKRGYHNAKIEENMD 126
KGG ++++H D FPER C N LYDRL +R Y+ K+ N+
Sbjct: 68 MDHLEPLMAKGGNVVEYHGCDFFPERWFQAVFVVTCPNTTLYDRLKERNYNEKKLASNIQ 127
Query: 127 AEIMGVVLQDAHDSYAQEIVVELQSDTTEEMDKNVDRIIAWQEIWLKQ 174
EI G +L++A DSY +IV EL+ +T + ++ + W +W ++
Sbjct: 128 CEIFGTILEEARDSYKSDIVFELKGETKADAHISIKTVKNWYRMWKRK 175
>At5g60340_1 [F] KOG3347 Predicted nucleotide kinase/nuclear protein involved
oxidative stress response
Length = 196
Score = 72.0 bits (175), Expect = 6e-13
Identities = 37/107 (34%), Positives = 55/107 (50%), Gaps = 1/107 (0%)
Query: 5 RFKPNIIVSGTPGCGKSTTCELLSRRLPEYTYYNISDFAKEHDCYDGYDDARKSNIVXXX 64
R +PN++++GTPG GKSTT L+ Y I D KE + Y G+D+ + + +
Sbjct: 11 RERPNLLITGTPGTGKSTTASALAEAT-NLRYICIGDLVKEKEFYHGWDNELECHFINED 69
Query: 65 XXXXXXXXXXRKGGCIIDWHVNDVFPERXXXXXXXXRCDNGILYDRL 111
+GG I+D+H D FP+R R +N +LYDRL
Sbjct: 70 SVIDELDDAMIEGGNIVDYHGCDFFPQRWFDRVVVLRTENSVLYDRL 116
>ECU10g0960 [F] KOG3347 Predicted nucleotide kinase/nuclear protein involved
oxidative stress response
Length = 170
Score = 55.8 bits (133), Expect = 4e-08
Identities = 37/133 (27%), Positives = 60/133 (44%), Gaps = 2/133 (1%)
Query: 10 IIVSGTPGCGKSTTCELLSRRLPEYTYYNISDFAKEHDCYDGYDDARKSNIVXXXXXXXX 69
I+V+GTPG GK+T +S + +S + +E++ Y+ Y + KS +
Sbjct: 3 ILVAGTPGVGKTTFSSRISEMFG-IPHIEMSRYIEENNLYEEYSETYKSLLFDDRVVRKS 61
Query: 70 XXXXX-RKGGCIIDWHVNDVFPERXXXXXXXXRCDNGILYDRLNKRGYHNAKIEENMDAE 128
K I+D H + +LY RL KRGY KI+EN++ E
Sbjct: 62 LEMYVIGKDSYIVDTHSCGMVKGMSFDLIFLLTAPVEVLYKRLKKRGYDEDKIKENIECE 121
Query: 129 IMGVVLQDAHDSY 141
I GVV ++ + +
Sbjct: 122 IFGVVEEEVEEFF 134
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.136 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,862,774
Number of Sequences: 60738
Number of extensions: 393334
Number of successful extensions: 1563
Number of sequences better than 1.0e-05: 7
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1551
Number of HSP's gapped (non-prelim): 7
length of query: 211
length of database: 30,389,216
effective HSP length: 102
effective length of query: 109
effective length of database: 24,193,940
effective search space: 2637139460
effective search space used: 2637139460
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)