ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIV3137   suspect: LH   P     KOG4480  Inorganic ion transport and metabolism                         Heme oxygenase

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIV3137 1059096 1058161 -312 
         (312 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YLR205c [P] KOG4480 Heme oxygenase                                    288   5e-78
Hs8051608 [P] KOG4480 Heme oxygenase                                   60   5e-09

>YLR205c [P] KOG4480 Heme oxygenase
          Length = 273

 Score =  288 bits (738), Expect = 5e-78
 Identities = 140/263 (53%), Positives = 188/263 (71%), Gaps = 1/263 (0%)

Query: 45  MRHGFIYRQGIVAYYYVFHAIEQEIDRLLEHPVTVQDEKVKGILQQFWCEEFRRSDKLVL 104
           MRHGFIYRQGI+AYYYVF AIEQEIDRLL  PVT ++ +   IL+QFW E+FRRS ++  
Sbjct: 1   MRHGFIYRQGILAYYYVFDAIEQEIDRLLNDPVTEEELQTSTILKQFWLEDFRRSTQIYK 60

Query: 105 DLQVLYNDEYPGSEQLQEFLDGFQLPAKLQEFVDEIHSNVQKEPHTILAYCHVLYLALFA 164
           DL++LY++ +  +E L EFL  FQ P  LQ+F++ IH N+ KEP TIL+YCHVLYLALFA
Sbjct: 61  DLKLLYSNTFKSTESLNEFLATFQKPPLLQQFINNIHENIHKEPCTILSYCHVLYLALFA 120

Query: 165 GGRVMKSNLYRHIGLFPKFGHLSPKELVRRATNFFTFSEEGVDDENRLRWQYKKGYXXXX 224
           GG++++SNLYR +GLFP F  LS KELV++ TNFFTFS+ G  +E RL+W+YKK Y    
Sbjct: 121 GGKLIRSNLYRRLGLFPNFEKLSQKELVKKGTNFFTFSDLGPTEETRLKWEYKKNYELAT 180

Query: 225 XXXXXXXXXXXIIEVSQTIFQRNMEVVAEIGEINRAELMGKFSYKLISFLSEEWKYSEKL 284
                      II V++ IF  N  +VAEIGE+NR ELMGKFS+K I++L EEW ++ K 
Sbjct: 181 RTELTEAQKLQIISVAEGIFDWNFNIVAEIGELNRRELMGKFSFKCITYLYEEWMFN-KD 239

Query: 285 TPEVKKLIVFALIVFNMVFVYTI 307
           +   + L    L+V +++ ++ +
Sbjct: 240 SATRRALHTVMLLVLSIIAIWVL 262


>Hs8051608 [P] KOG4480 Heme oxygenase
          Length = 316

 Score = 59.7 bits (143), Expect = 5e-09
 Identities = 46/207 (22%), Positives = 89/207 (42%), Gaps = 33/207 (15%)

Query: 50  IYRQGIVAYYYVFHAIEQEIDRLLEHPVTVQDEKVKGILQQFWCEEFRRSDKLVLDLQVL 109
           +++    A Y+ + A+E+E++R  +HP              ++  E  R + L  D++  
Sbjct: 66  LFKLATTALYFTYSALEEEMERNKDHPA---------FAPLYFPMELHRKEALTKDMEYF 116

Query: 110 YNDEYPGSEQLQEFLDGFQLPAKLQEFVDEIHSNVQKEPHTILAYCHVLYLALFAGGRVM 169
           + + +   EQ+Q        P   Q++V+ IH   Q EP  ++A+ +  Y+   +GG+V+
Sbjct: 117 FGENW--EEQVQ-------CPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVL 167

Query: 170 KSNLYRHIGLFPKFGHLSPKELVRRATNFFTFSEEGVDDENRLRWQYKKGYXXXXXXXXX 229
           K    R + L P  G           T F+ F  E VD+  + +  Y+            
Sbjct: 168 KKVAQRALKL-PSTG---------EGTQFYLF--ENVDNAQQFKQLYR---ARMNALDLN 212

Query: 230 XXXXXXIIEVSQTIFQRNMEVVAEIGE 256
                 I+E +   F+ NM++  E+ +
Sbjct: 213 MKTKERIVEEANKAFEYNMQIFNELDQ 239


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.325    0.140    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,179,167
Number of Sequences: 60738
Number of extensions: 704047
Number of successful extensions: 2131
Number of sequences better than 1.0e-05: 2
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2129
Number of HSP's gapped (non-prelim): 2
length of query: 312
length of database: 30,389,216
effective HSP length: 106
effective length of query: 206
effective length of database: 23,950,988
effective search space: 4933903528
effective search space used: 4933903528
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)