ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV3214 check: MH L KOG0351 Replication, recombination and repair ATP-dependent DNA helicase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV3214 1079740 1083840 1367
(1367 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YMR190c [L] KOG0351 ATP-dependent DNA helicase 957 0.0
SPAC2G11.12 [L] KOG0351 ATP-dependent DNA helicase 506 e-142
7299503 [L] KOG0351 ATP-dependent DNA helicase 471 e-132
ECU07g1130 [L] KOG0351 ATP-dependent DNA helicase 437 e-122
Hs4557365 [L] KOG0351 ATP-dependent DNA helicase 437 e-122
At1g10930 [L] KOG0351 ATP-dependent DNA helicase 417 e-116
At1g60930 [L] KOG0351 ATP-dependent DNA helicase 382 e-105
CE13130_2 [L] KOG0351 ATP-dependent DNA helicase 381 e-105
Hs14591902 [R] KOG0353 ATP-dependent DNA helicase 373 e-102
At3g05740 [L] KOG0351 ATP-dependent DNA helicase 370 e-102
At1g31360 [R] KOG0353 ATP-dependent DNA helicase 336 2e-91
CE26682 [R] KOG0353 ATP-dependent DNA helicase 308 3e-83
7294377 [L] KOG0352 ATP-dependent DNA helicase 290 1e-77
Hs4759032 [L] KOG0352 ATP-dependent DNA helicase 280 9e-75
CE00941 [L] KOG0352 ATP-dependent DNA helicase 268 4e-71
Hs5739524_2 [L] KOG0351 ATP-dependent DNA helicase 248 4e-65
At1g27880 [L] KOG0351 ATP-dependent DNA helicase 202 2e-51
7295152 [L] KOG0351 ATP-dependent DNA helicase 202 4e-51
CE02651 [L] KOG0351 ATP-dependent DNA helicase 191 7e-48
At4g35740_2 [L] KOG0351 ATP-dependent DNA helicase 185 5e-46
Hs4759030 [L] KOG0351 ATP-dependent DNA helicase 181 7e-45
At5g27680 [L] KOG0351 ATP-dependent DNA helicase 141 8e-33
SPAC212.11 [L] KOG0351 ATP-dependent DNA helicase 110 2e-23
At2g45810 [A] KOG0326 ATP-dependent RNA helicase 80 2e-14
CE00839 [A] KOG0326 ATP-dependent RNA helicase 79 4e-14
At2g33730 [A] KOG0333 U5 snRNP-like RNA helicase subunit 79 6e-14
Hs4758138 [A] KOG0331 ATP-dependent RNA helicase 77 1e-13
Hs5453840_1 [A] KOG0331 ATP-dependent RNA helicase 77 2e-13
YDL160c [A] KOG0326 ATP-dependent RNA helicase 75 5e-13
At5g14610 [A] KOG0331 ATP-dependent RNA helicase 75 9e-13
ECU02g0670 [A] KOG0335 ATP-dependent RNA helicase 74 1e-12
At5g63120 [A] KOG0331 ATP-dependent RNA helicase 74 1e-12
At3g01540 [A] KOG0331 ATP-dependent RNA helicase 74 2e-12
At4g00660 [A] KOG0326 ATP-dependent RNA helicase 74 2e-12
At3g61240 [A] KOG0326 ATP-dependent RNA helicase 73 3e-12
At1g20920 [A] KOG0334 RNA helicase 73 3e-12
YDR291w [A] KOG4150 Predicted ATP-dependent RNA helicase 71 1e-11
7298989 [A] KOG0336 ATP-dependent RNA helicase 71 1e-11
Hs4758140 [A] KOG0326 ATP-dependent RNA helicase 70 2e-11
YNL112w [A] KOG0331 ATP-dependent RNA helicase 70 3e-11
CE01341 [J] KOG0327 Translation initiation factor 4F helicase su... 69 4e-11
At3g06480 [A] KOG0331 ATP-dependent RNA helicase 69 4e-11
Hs22057246 [A] KOG0336 ATP-dependent RNA helicase 68 1e-10
YBR237w [A] KOG0334 RNA helicase 67 2e-10
7295314 [A] KOG0331 ATP-dependent RNA helicase 67 2e-10
Hs20149629 [A] KOG0330 ATP-dependent RNA helicase 66 4e-10
ECU08g1080 [A] KOG0331 ATP-dependent RNA helicase 66 4e-10
CE18785 [A] KOG0331 ATP-dependent RNA helicase 66 4e-10
7297048 [J] KOG0327 Translation initiation factor 4F helicase su... 66 4e-10
SPAC1F5.10 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1... 65 6e-10
7296990 [A] KOG0329 ATP-dependent RNA helicase 65 1e-09
SPBC776.09 [A] KOG0326 ATP-dependent RNA helicase 64 1e-09
Hs13129006 [A] KOG0331 ATP-dependent RNA helicase 64 1e-09
CE01338 [J] KOG0327 Translation initiation factor 4F helicase su... 64 2e-09
At1g55150 [A] KOG0331 ATP-dependent RNA helicase 64 2e-09
7295505 [A] KOG0346 RNA helicase 64 2e-09
7290853 [A] KOG0331 ATP-dependent RNA helicase 64 2e-09
7299019 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 in... 63 3e-09
Hs7661920 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 ... 63 4e-09
At1g16280 [A] KOG0340 ATP-dependent RNA helicase 63 4e-09
CE26887 [A] KOG0333 U5 snRNP-like RNA helicase subunit 62 5e-09
CE24878 [A] KOG0333 U5 snRNP-like RNA helicase subunit 62 5e-09
YGL078c [A] KOG0331 ATP-dependent RNA helicase 61 1e-08
CE22474 [A] KOG0336 ATP-dependent RNA helicase 61 1e-08
At3g19760 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 ... 61 1e-08
7297629 [A] KOG0326 ATP-dependent RNA helicase 61 1e-08
YDR021w [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 in... 60 2e-08
SPBC543.06c [A] KOG0340 ATP-dependent RNA helicase 60 2e-08
At5g51280 [A] KOG0341 DEAD-box protein abstrakt 60 2e-08
Hs13787209 [A] KOG0331 ATP-dependent RNA helicase 60 3e-08
SPAC1006.07 [J] KOG0327 Translation initiation factor 4F helicas... 59 4e-08
ECU10g0690 [A] KOG0345 ATP-dependent RNA helicase 59 4e-08
At4g33370 [A] KOG0341 DEAD-box protein abstrakt 59 4e-08
ECU09g1640 [A] KOG0326 ATP-dependent RNA helicase 59 5e-08
CE09901 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 in... 59 5e-08
CE06239 [A] KOG0344 ATP-dependent RNA helicase 59 5e-08
7296646 [A] KOG0331 ATP-dependent RNA helicase 59 5e-08
Hs21040371 [A] KOG0329 ATP-dependent RNA helicase 58 9e-08
ECU05g1270 [A] KOG0331 ATP-dependent RNA helicase 58 9e-08
At3g18600 [A] KOG0342 ATP-dependent RNA helicase pitchoune 58 9e-08
YPL119c [A] KOG0335 ATP-dependent RNA helicase 58 1e-07
CE23814 [A] KOG0340 ATP-dependent RNA helicase 58 1e-07
7293369 [A] KOG0343 RNA Helicase 58 1e-07
YHR169w [A] KOG0340 ATP-dependent RNA helicase 57 2e-07
Hs4758112 [A] KOG0329 ATP-dependent RNA helicase 57 2e-07
Hs13514813 [A] KOG0335 ATP-dependent RNA helicase 57 2e-07
YKR059w [J] KOG0327 Translation initiation factor 4F helicase su... 57 3e-07
YJL138c [J] KOG0327 Translation initiation factor 4F helicase su... 57 3e-07
Hs4503529 [J] KOG0327 Translation initiation factor 4F helicase ... 57 3e-07
Hs4759278 [A] KOG0333 U5 snRNP-like RNA helicase subunit 56 3e-07
Hs17474597 [A] KOG0333 U5 snRNP-like RNA helicase subunit 56 3e-07
At5g11200 [A] KOG0329 ATP-dependent RNA helicase 56 3e-07
YDL084w [A] KOG0329 ATP-dependent RNA helicase 55 6e-07
At5g11170 [A] KOG0329 ATP-dependent RNA helicase 55 6e-07
Hs4503531 [J] KOG0327 Translation initiation factor 4F helicase ... 55 1e-06
SPCC63.11 [A] KOG0333 U5 snRNP-like RNA helicase subunit 54 1e-06
At3g53110 [A] KOG0332 ATP-dependent RNA helicase 54 1e-06
SPAC17G6.14c [A] KOG0329 ATP-dependent RNA helicase 54 2e-06
At1g54270 [J] KOG0327 Translation initiation factor 4F helicase ... 54 2e-06
Hs21071032 [A] KOG0341 DEAD-box protein abstrakt 54 2e-06
At3g22330 [A] KOG0331 ATP-dependent RNA helicase 54 2e-06
At3g13920 [J] KOG0327 Translation initiation factor 4F helicase ... 54 2e-06
At1g72730 [J] KOG0327 Translation initiation factor 4F helicase ... 54 2e-06
7294824 [K] KOG4284 DEAD box protein 54 2e-06
YGL251c [A] KOG0952 DNA/RNA helicase MER3/SLH1 DEAD-box superfamily 53 3e-06
At5g65900 [A] KOG0342 ATP-dependent RNA helicase pitchoune 53 3e-06
At1g51380 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 ... 53 4e-06
Hs13514809 [A] KOG0335 ATP-dependent RNA helicase 52 5e-06
SPCC1795.11 [A] KOG0335 ATP-dependent RNA helicase 52 6e-06
Hs14251212 [K] KOG4284 DEAD box protein 52 6e-06
CE03025 [A] KOG0329 ATP-dependent RNA helicase 52 8e-06
At5g08610 [A] KOG0342 ATP-dependent RNA helicase pitchoune 52 8e-06
>YMR190c [L] KOG0351 ATP-dependent DNA helicase
Length = 1447
Score = 957 bits (2474), Expect = 0.0
Identities = 532/1068 (49%), Positives = 689/1068 (63%), Gaps = 87/1068 (8%)
Query: 346 FLTTMEEDQIYDNELHESDKDFVVDGNYLDYDEGPEADAEYHE-------------EDDS 392
++TT +E++ + L++SD DFVV+ D P D +YH+ E D+
Sbjct: 421 YMTTRDEEKEENELLNQSDFDFVVND-----DLDPTQDTDYHDNMDVSANIQESSQEGDT 475
Query: 393 NVPFEKERSSNQIIIDSSPGSSP-----------RHXXXXXXXXXXXXXXXXXXEFQPTP 441
++ N +I SSP + H F
Sbjct: 476 RSTITLSQNKNVQVILSSPTAQSVPSNGQNQIGVEHIDLLEDDLEKDAILDDSMSFSFGR 535
Query: 442 QXXXXXXXXXXXXXXPISESLPQDHTVAVHSEEFEPLSDTDLEEFDAEREDQTQFDEIKE 501
Q SE +D ++ E LSD+DLE FD ERE++TQ +I+E
Sbjct: 536 QHMPMSHSDLELID---SEKENEDFEEDNNNNGIEYLSDSDLERFDEERENRTQVADIQE 592
Query: 502 LDDDLKIISEAKL--DAEDVPLSFA--IKKEPKSLDTQLQTELVPVPEVIEDDDFSMADL 557
LD+DLKII+E KL D E P S++ IK+E S+ + + + DDDFS++D+
Sbjct: 593 LDNDLKIITERKLTGDNEHPPPSWSPKIKREKSSVSQKDEEDDF-------DDDFSLSDI 645
Query: 558 EPYMEETEKCTRENSVQPQYAWTSEMYHKLRHVFGLDSFRPNQLEAVNATLQGKDAFVLM 617
+ ++ ++ N P Y W+ E+ ++L VF L FRPNQLEAVNATLQGKD FVLM
Sbjct: 646 ---VSKSNLSSKTNG--PTYPWSDEVLYRLHEVFKLPGFRPNQLEAVNATLQGKDVFVLM 700
Query: 618 PTGGGKSLCYQLPAIVKSGRTSGTTIVVSPLISLMQDQVEHLLAKDIKASMFSSKGTAEQ 677
PTGGGKSLCYQLPA+VKSG+T GTTIV+SPLISLMQDQVEHLL K+IKASMFSS+GTAEQ
Sbjct: 701 PTGGGKSLCYQLPAVVKSGKTHGTTIVISPLISLMQDQVEHLLNKNIKASMFSSRGTAEQ 760
Query: 678 RRMTFNLFMNGLLELVYISPEMIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDF 737
RR TFNLF+NGLL+LVYISPEMI AS QCK+AIS+LY GKLARIVVDEAHCVSNWGHDF
Sbjct: 761 RRQTFNLFINGLLDLVYISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDF 820
Query: 738 RPDYKELSFFKQEYPDIPMIALTATASEQVRMDIIHNLQLNNPVFLKQSFNRTNLFYQVL 797
RPDYKEL FFK+EYPDIPMIALTATASEQVRMDIIHNL+L PVFLKQSFNRTNL+Y+V
Sbjct: 821 RPDYKELKFFKREYPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVN 880
Query: 798 KKEKNSIFQMCDMIRTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERF 857
KK KN+IF++CD ++++FKNQTGIIYCHSK SCEQTSA MQ+NG+KCA+YHAGM+PDER
Sbjct: 881 KKTKNTIFEICDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERL 940
Query: 858 QVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQC 917
VQ+ WQAD +QVICATVAFGMGIDKPDVRFV+HFTVPRTLEGYYQETGRAGRDGN+S C
Sbjct: 941 SVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYC 1000
Query: 918 IMYYSFRDVRTIQTMIQKDKNLDMINKEKHLDKLQQVMQYCDNRTDCRRQLVLSYFNEQF 977
I Y+SFRD+RT+QTMIQKDKNLD NKEKHL+KLQQVM YCDN TDCRR+LVLSYFNE F
Sbjct: 1001 ITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDF 1060
Query: 978 DPKDCGKNCDNCKNSSNIVYQTKDVTEESKDIANLIKSIQDSKVTLIHCQDVYKGSKYQK 1037
D K C KNCDNC+NS+N++ + +DVTE +K I L++SIQ+ +VT+I+CQDV+KGS+ K
Sbjct: 1061 DSKLCHKNCDNCRNSANVINEERDVTEPAKKIVKLVESIQNERVTIIYCQDVFKGSRSSK 1120
Query: 1038 IVQLGHHQSPYHGMGKDWKKADIERIFFKLVTERILNEYSVSTGRGFFSTYVKLGPRAKD 1097
IVQ H HG+GK +K++IERIFF L+T R+L EYS+ GF S+YVK+GP AK
Sbjct: 1121 IVQANHDTLEEHGIGKSMQKSEIERIFFHLITIRVLQEYSIMNNSGFASSYVKVGPNAKK 1180
Query: 1098 LFKGKLKVEIRFVATEETTGSNRYSDKNGKEGPAHNHSARAISGRSLTDKSNMAVLSTPN 1157
L GK++++++F T + A+ + I+ +S T N+A N
Sbjct: 1181 LLTGKMEIKMQF-----TISAPNSRPSTSSSFQANEDNIPVIAQKSTTIGGNVAA----N 1231
Query: 1158 VSRSFTTNSSDIHPGSAKDHINRFRYSEMADARSSPVQLTNGVSYVSSQEQAHITKCFNL 1217
R SAK+H+ + Y S P+ L N S+QE ++ +
Sbjct: 1232 PPRFI----------SAKEHLRSYTYGGSTMGSSHPITLKNTSDLRSTQELNNLRMTYER 1281
Query: 1218 LKDIAINVSSKFNFPNDTMLISDAILWKAANKLPADQASFANLNGSNDPALAKRFKYFSA 1277
L+++++N+ ++ P + D+IL K A LP + ++FA L G+ + +RFKYF A
Sbjct: 1282 LRELSLNLGNRM-VPPVGNFMPDSILKKMAAILPMNDSAFATL-GTVEDKYRRRFKYFKA 1339
Query: 1278 TLKKCKKER-------------HHIIVVSSDKSLPTTTETGDRSEYF--NGNEGIDDSAV 1322
T+ K+R + ++ S TG +S++F N NE ++ +
Sbjct: 1340 TIADLSKKRSSEDHEKYDTILNDEFVNRAAASSNGIAQSTGTKSKFFGANLNEAKENEQI 1399
Query: 1323 ISQIKEIMF-XXXXXXXXXXXXXXKRSKPKASGRGWKKSWK--YSKRK 1367
I+QI++ K SK A+GR ++++ Y RK
Sbjct: 1400 INQIRQSQLPKNTTSSKSGTRSISKSSKKSANGRRGFRNYRGHYRGRK 1447
>SPAC2G11.12 [L] KOG0351 ATP-dependent DNA helicase
Length = 1328
Score = 506 bits (1303), Expect = e-142
Identities = 312/849 (36%), Positives = 471/849 (54%), Gaps = 48/849 (5%)
Query: 466 HTVAVHSEEFEPLSDTDLEEFDAEREDQTQF-----DEIKE---LDDDLKIISEAKLDAE 517
H+ AV S + ++D+ EFD D F D I + D+ +I + + D E
Sbjct: 389 HSEAVVSPLQSNIRNSDIAEFDEFDIDDADFTFNTTDPINDESGASSDVVVIDDEEDDIE 448
Query: 518 DVPLSFAIK--KEPKSLDTQLQTELVPVPEVIEDDDFSMADLEPYMEETEKCTRENSVQP 575
+ PL+ A+K K S + LQ+ + P + E D + L P +++
Sbjct: 449 NRPLNQALKASKAAVSNASLLQSSSLDRPLLGEMKDKNHKVLMPSLDDP---------ML 499
Query: 576 QYAWTSEMYHKLRHVFGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKS 635
Y W+ E+ L+H F L FR NQLEA+N TL GKD F+LMPTGGGKSLCYQLPA+++
Sbjct: 500 SYPWSKEVLGCLKHKFHLKGFRKNQLEAINGTLSGKDVFILMPTGGGKSLCYQLPAVIEG 559
Query: 636 GRTSGTTIVVSPLISLMQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFM--NGLLELV 693
G + G T+V+SPL+SLMQDQ++HL +I + S + A++RR + M N L++L+
Sbjct: 560 GASRGVTLVISPLLSLMQDQLDHLRKLNIPSLPLSGEQPADERRQVISFLMAKNVLVKLL 619
Query: 694 YISPEMIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPD 753
Y++PE + ++ + + LYE LARIV+DEAHCVS+WGHDFRPDYK+L + Y
Sbjct: 620 YVTPEGLASNGAITRVLKSLYERKLLARIVIDEAHCVSHWGHDFRPDYKQLGLLRDRYQG 679
Query: 754 IPMIALTATASEQVRMDIIHNLQLNNPVFLKQSFNRTNLFYQVLKKEKNSIFQMCDMIRT 813
IP +ALTATA+E V+ DII+ L++ N + LK SFNR NLFY++ K +K+ ++ I
Sbjct: 680 IPFMALTATANEIVKKDIINTLRMENCLELKSSFNRPNLFYEI-KPKKDLYTELYRFISN 738
Query: 814 KFKNQTGIIYCHSKNSCEQTSALMQKN-GVKCAFYHAGMDPDERFQVQQDWQADRVQVIC 872
+++GIIYC S+ SCEQ +A ++ + G+K YHAG++ ER ++Q +WQ+ ++I
Sbjct: 739 GHLHESGIIYCLSRTSCEQVAAKLRNDYGLKAWHYHAGLEKVERQRIQNEWQSGSYKIIV 798
Query: 873 ATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTM 932
AT+AFGMG+DK DVRFV H + P++LEGYYQETGRAGRDG + CIM+YS++D T Q +
Sbjct: 799 ATIAFGMGVDKGDVRFVIHHSFPKSLEGYYQETGRAGRDGKPAHCIMFYSYKDHVTFQKL 858
Query: 933 IQKDKNLDMINKEKHLDKLQQVMQYCDNRTDCRRQLVLSYFNEQFDPKDCGKNCDNCKNS 992
I D KE+ L+QV+Q+C+N+TDCRR+ VL+YF E FD C K CD C
Sbjct: 859 IMSGDG-DAETKERQRQMLRQVIQFCENKTDCRRKQVLAYFGENFDKVHCRKGCDICCEE 917
Query: 993 SNIVYQTKDVTEESKDIANLIKSIQDSKVTLIHCQDVYKGSKYQKIVQLGHHQSPYHGMG 1052
+ + Q D+TE S L+KSI K TL+ D+++GSK KIV+ G + G+G
Sbjct: 918 ATYIKQ--DMTEFSLQAIKLLKSI-SGKATLLQLMDIFRGSKSAKIVENGWDRLEGAGVG 974
Query: 1053 KDWKKADIERIFFKLVTERILNEYSVSTGRGFFSTYVKLGPRA--KDLFKGKLKVEIRFV 1110
K + D ER+F LV+E + E + RGF S YV G + + GK ++ +
Sbjct: 975 KLLNRGDSERLFHHLVSEGVFVEKVEANRRGFVSAYVVPGRQTIINSVLAGKRRIILDVK 1034
Query: 1111 ATEETTGSNRYSDKNGKEGPAHNHSARAISGRSLTDKSNMAVLSTPNVSRSFTTNSSDIH 1170
+ ++ S K PA R +S T + ++ T V + + +
Sbjct: 1035 ESSSKPDTSSRSLSRSKTLPA----LREYQLKSTTASVDCSI-GTREVDEIYDSQMPPVK 1089
Query: 1171 PGSAKDHINRFRYSEMADARSSPVQLTNGVSYVSSQEQAHITKCFNLLKDIAINVSSKFN 1230
P N+ E+ +G ++S E +T+C LK + N+ + +
Sbjct: 1090 PSLIHSR-NKIDLEEL-----------SGQKFMSEYEIDVMTRCLKDLKLLRSNLMA-ID 1136
Query: 1231 FPNDTMLISDAILWKAANKLPADQASFANLNG-SNDPALAKRFKYFSATLKKCKKERHHI 1289
+ +D++L A KLP + ++G SN+ A+ K+ K ++ ++
Sbjct: 1137 DSRVSSYFTDSVLLSMAKKLPRNVKELKEIHGVSNEKAVNLGPKFLQVIQKFIDEKEQNL 1196
Query: 1290 IVVSSDKSL 1298
D SL
Sbjct: 1197 EGTELDPSL 1205
>7299503 [L] KOG0351 ATP-dependent DNA helicase
Length = 1487
Score = 471 bits (1211), Expect = e-132
Identities = 255/603 (42%), Positives = 363/603 (59%), Gaps = 20/603 (3%)
Query: 576 QYAWTSEMYHKLRHVFGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKS 635
++ ++ + H L + FGL SFRPNQL+ +NATL G D FVLMPTGGGKSLCYQLPAI+
Sbjct: 718 KFEHSTRLMHGLSYSFGLKSFRPNQLQVINATLLGNDCFVLMPTGGGKSLCYQLPAIL-- 775
Query: 636 GRTSGTTIVVSPLISLMQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNG--LLELV 693
T G TIV+SPL SL+ DQ+ L + DI A S + + + +++L+
Sbjct: 776 --TEGVTIVISPLKSLIFDQINKLASLDICAKSLSGEQKMADVMAIYRDLESQPPMVKLL 833
Query: 694 YISPEMIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPD 753
Y++PE I +S + + + L + ++R V+DEAHCVS WGHDFRPDYK+L K+ +P+
Sbjct: 834 YVTPEKISSSARFQDTLDTLNSNNYISRFVIDEAHCVSQWGHDFRPDYKKLGVLKKRFPN 893
Query: 754 IPMIALTATASEQVRMDIIHNLQLNNPVFLKQSFNRTNLFYQVL-KKEKNSIFQMCDMIR 812
+P IALTATA+ +VR+DI+ L L N + SFNR+NL Y+VL KK +++ + IR
Sbjct: 894 VPTIALTATATPRVRLDILAQLNLKNCKWFLSSFNRSNLRYRVLPKKGVSTLDDISRYIR 953
Query: 813 TKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVIC 872
+K ++ +GIIYC S+ C++TS M K+GV+ YHAG+ +R Q+DW +++VIC
Sbjct: 954 SKPQHFSGIIYCLSRKECDETSKKMCKDGVRAVSYHAGLTDTDRESRQKDWLTGKMRVIC 1013
Query: 873 ATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTM 932
ATVAFGMGIDKPDVRFV H+++P+++EGYYQE GRAGRDG+ + CI+YY++ D+ I+ M
Sbjct: 1014 ATVAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGDVADCILYYNYSDMLRIKKM 1073
Query: 933 IQKDKNLDMINKEKHLDKLQQVMQYCDNRTDCRRQLVLSYFNEQFDPKDCGKN----CDN 988
+ DK L K+ H+D L +++ YC+N TDCRR L YF E F + C +N CDN
Sbjct: 1074 LDSDKALQYNVKKIHVDNLYRIVGYCENLTDCRRAQQLDYFGEHFTSEQCLENRETACDN 1133
Query: 989 CKNSSNIVYQTKDVTEESKDIANLIKSIQD--SKVTLIHCQDVYKGSKYQKIVQLGHHQS 1046
C N Y+ D E ++ A +K + S+ TL+H DV KGSK +KI+ HH++
Sbjct: 1134 CINKR--AYKAVDALEHARKAARAVKDLCSGRSRFTLLHIADVLKGSKIKKIIDFNHHKT 1191
Query: 1047 PYHGMGKDWKKADIERIFFKLVTERILNEYSVSTGRGFFSTYVKLGPRAKDLFKGKLKVE 1106
P+HG+ KDW K D+ R+ K+V + L E + T F Y+ LG L +G E
Sbjct: 1192 PHHGVLKDWDKNDVHRLLRKMVIDGFLREDLIFT-NDFPQAYLYLGNNISKLMEGTPNFE 1250
Query: 1107 IRFV--ATEETTGSNRYSDKNGKEGPAHNHSARAISGRSLTDKSNM--AVLSTPNVSRSF 1162
A E SD R I R TD ++ + S NV+ +
Sbjct: 1251 FAVTKNAKEAKAAVGSVSDGATSSTADGQSGMREIHERCYTDLLDLCRTIASQRNVTMAS 1310
Query: 1163 TTN 1165
N
Sbjct: 1311 IMN 1313
>ECU07g1130 [L] KOG0351 ATP-dependent DNA helicase
Length = 766
Score = 437 bits (1125), Expect = e-122
Identities = 249/593 (41%), Positives = 342/593 (56%), Gaps = 33/593 (5%)
Query: 549 DDDFSMADLEPYMEETEKCTRENSVQPQYAWTSEMYHKLRHVFGLDSFRPNQLEAVNATL 608
DD F LE + + + S++ Y LR VF + FR NQ E + A L
Sbjct: 200 DDSFPAHVLEESSLSSSEDSEAKSIEEFY---------LREVFKMKEFRTNQREVIQACL 250
Query: 609 QGKDAFVLMPTGGGKSLCYQLPAIVKSGRTSGTTIVVSPLISLMQDQVEHLLAKDIKASM 668
GKD FVLMPTGGGKS+CYQLPA+V G TIVVSPL+SL+QDQ+ +LL K I A
Sbjct: 251 SGKDVFVLMPTGGGKSICYQLPALVYDG----ITIVVSPLLSLVQDQIRNLLQKGILALP 306
Query: 669 FSSKGTAEQRRMTFNLFMNGLL--ELVYISPEMIKASVQCKKAISKLYEHGKLARIVVDE 726
+S + +R + F + L ++ Y++PE+I S +S L G+L R V+DE
Sbjct: 307 INSNLSRAERDLVFQVLGGDELICKIFYVTPELIAKSGHFHDVLSGLVCRGRLKRFVIDE 366
Query: 727 AHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVRMDIIHNLQLNNPVFLKQS 786
AHCVS WGHDFRPDYKEL + YP +P+IALTATA+++V MDI+ NL + K S
Sbjct: 367 AHCVSQWGHDFRPDYKELGSMRARYPSVPIIALTATATQKVEMDILENLGIRGCETFKMS 426
Query: 787 FNRTNLFYQVLKKEKNSIFQMCDMIRTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAF 846
FNR+NL Y+V K + ++T F + GIIYC SK CE S + K + AF
Sbjct: 427 FNRSNLRYEVRAKTSTVELDIASFVQTHFPDCCGIIYCTSKKECEMISEKLGKY-MGTAF 485
Query: 847 YHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETG 906
YHAG+ +ER VQ+ W +VI AT+AFGMGIDK DVRFV H+ +P++LEGYYQETG
Sbjct: 486 YHAGLSKNERNSVQEKWNRGEFKVIVATIAFGMGIDKKDVRFVIHYCIPKSLEGYYQETG 545
Query: 907 RAGRDGNFSQCIMYYSFRDVRTIQTMIQKDKNLDMINKEKHLDKLQQVMQYCDNRTDCRR 966
RAGRDG S C+++Y++ D + I MI+K K++ + L+ V+Q+C+N+TDCRR
Sbjct: 546 RAGRDGLESVCVLFYTYGDKKKISFMIEKGDG-GYEQKQRQREDLEAVIQFCENKTDCRR 604
Query: 967 QLVLSYFNEQFDPKDCGKNCDNCKNSSNIVYQTKDVTEESKDIANLIKSIQDSKVTLIHC 1026
VL++F E+FDP+ C K CDNC+ + KD T E++D+ L+ + S++TL
Sbjct: 605 MQVLAHFGERFDPQMCRKTCDNCRREGVV---KKDYTREARDLILLVYT--SSRITLCQA 659
Query: 1027 QDVYKGSKYQKIVQLGHHQSPYHGMGKDWKKADIERIFFKLVTERILNEYSVSTGRGFFS 1086
DVYKG +K + + S Y+G GK +K IERI L++ + E R F
Sbjct: 660 VDVYKGLSNKKSRE--YSGSEYYGKGKRLRKTTIERILRSLISHGYIQERIEFMERRFSW 717
Query: 1087 TYVKLGPRAKDLFKGKLKVEIRFVATEETTGSNRYSDKNGKEGPAHNHSARAI 1139
+Y L K V+ +A EE G D +EGP S + +
Sbjct: 718 SY---------LVAKKTSVDRLELAEEEDEGHRTPRDGKKREGPKGGTSRKGM 761
>Hs4557365 [L] KOG0351 ATP-dependent DNA helicase
Length = 1417
Score = 437 bits (1124), Expect = e-122
Identities = 253/682 (37%), Positives = 393/682 (57%), Gaps = 52/682 (7%)
Query: 466 HTVAVHSEEFEPLSDTDLEEFDAEREDQTQFDEIKELDDDLKIISEAKLDAEDVPLSFAI 525
HT +++ E E D++ FD + D D+ +++ +L + + + I
Sbjct: 536 HTASINDLERETQPSYDIDNFDIDDFDDD--DDWEDIMHNLAASKSSTAAYQPIKEGRPI 593
Query: 526 KKEPKSLDTQLQTELVPVPEVIEDDDFSMADLEPYMEETEKCTRENSVQPQ------YAW 579
K + L + +T+ +PV ++ +FS + ++ Y +++ + +++ + +
Sbjct: 594 KSVSERLSSA-KTDCLPVSSTAQNINFSES-IQNYTDKSAQNLASRNLKHERFQSLSFPH 651
Query: 580 TSEMYHKLRHVFGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTS 639
T EM FGL +FR NQLEA+NA L G+D F+LMPTGGGKSLCYQLPA V +
Sbjct: 652 TKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACV----SP 707
Query: 640 GTTIVVSPLISLMQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFM-----NGLLELVY 694
G T+V+SPL SL+ DQV+ L + DI A+ + T + N+++ + +++L+Y
Sbjct: 708 GVTVVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEAT---NIYLQLSKKDPIIKLLY 764
Query: 695 ISPEMIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDI 754
++PE I AS + + LYE LAR V+DEAHCVS WGHDFR DYK ++ +Q++P +
Sbjct: 765 VTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSV 824
Query: 755 PMIALTATASEQVRMDIIHNLQLNNPVFLKQSFNRTNLFYQVL-KKEKNSIFQMCDMIRT 813
P++ALTATA+ +V+ DI+ L++ P SFNR NL Y VL KK K F + IR
Sbjct: 825 PVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRK 884
Query: 814 KFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDW-QADRVQVIC 872
+GIIYC S+ C+ + +Q++G+ YHAG+ R +VQQ W D QVIC
Sbjct: 885 HHPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVIC 944
Query: 873 ATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTM 932
AT+AFGMGIDKPDVRFV H ++P+++EGYYQE+GRAGRDG S C+++Y++ DV ++ +
Sbjct: 945 ATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRL 1004
Query: 933 IQKDKNLDMINKEKHLDKLQQVMQYCDNRTDCRRQLVLSYFNEQ-FDPKDCGK----NCD 987
I +K+ + +E H + L ++ YC+N T+CRR +L+YF E F+P C K +CD
Sbjct: 1005 IMMEKDGNHHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNPDFCKKHPDVSCD 1064
Query: 988 NCKNSSNIVYQTKDVTEESKDIANLIKSIQDS-------------KVTLIHCQDVYKGSK 1034
NC + + Y+T+DVT++ K I ++ S + T+ D++ GSK
Sbjct: 1065 NCCKTKD--YKTRDVTDDVKSIVRFVQEHSSSQGMRNIKHVGPSGRFTMNMLVDIFLGSK 1122
Query: 1035 YQKIVQLGHHQSPYHGMGKDWKKADIERIFFKLVTERILNEYSVSTGRGFFSTYVKLGPR 1094
KI QS G G + + + ER+F KL+ ++IL+E YV LG +
Sbjct: 1123 SAKI------QSGIFGKGSAYSRHNAERLFKKLILDKILDEDLYINANDQAIAYVMLGNK 1176
Query: 1095 AKDLFKGKLKVEIRFVATEETT 1116
A+ + G LKV+ F+ TE ++
Sbjct: 1177 AQTVLNGNLKVD--FMETENSS 1196
>At1g10930 [L] KOG0351 ATP-dependent DNA helicase
Length = 665
Score = 417 bits (1071), Expect = e-116
Identities = 219/504 (43%), Positives = 316/504 (62%), Gaps = 24/504 (4%)
Query: 588 RHVFGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTSGTTIVVSP 647
+ VFG SFRPNQ E +NAT+ G D FVLMPTGGGKSL YQLPA++ G T+V+SP
Sbjct: 117 KKVFGNHSFRPNQREIINATMSGSDVFVLMPTGGGKSLTYQLPALI----CGGITLVISP 172
Query: 648 LISLMQDQVEHLLAKDIKASMFSS-KGTAEQRRMTFNLFM-NGLLELVYISPEMIKASVQ 705
L+SL+QDQ+ +LL +I A+ S+ AEQ ++ L + +L+Y++PE + S
Sbjct: 173 LVSLIQDQIMNLLQANIPAASLSAGMEWAEQLKIFQELNSEHSKYKLLYVTPEKVAKSDS 232
Query: 706 CKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASE 765
+ + L G LAR V+DEAHCVS WGHDFRPDY+ L KQ++P+IP++ALTATA+
Sbjct: 233 LLRHLENLNSRGLLARFVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNIPVLALTATATA 292
Query: 766 QVRMDIIHNLQLNNPVFLKQSFNRTNLFYQVLKKEKNSIFQMCDMIRTKFKNQTGIIYCH 825
V+ D++ L L N V +QSFNR NL+Y V+ K K + + I+ ++ GIIYC
Sbjct: 293 SVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKTKKCLEDIDKFIKENHFDECGIIYCL 352
Query: 826 SKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPD 885
S+ CE+ S +Q+ G K AFYH M+P++R +Q W D + +ICATVAFGMGI+KPD
Sbjct: 353 SRMDCEKVSERLQEFGHKAAFYHGSMEPEQRAFIQTQWSKDEINIICATVAFGMGINKPD 412
Query: 886 VRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQKDKNLDM---- 941
VRFV H ++P+++EGY+QE GRAGRDG S C++YY + D ++ MI + +D
Sbjct: 413 VRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGYGDYIRVKHMISQG-GVDQSPMA 471
Query: 942 --INK--------EKHLDKLQQVMQYCDNRTDCRRQLVLSYFNEQFDPKDCGKNCDNCKN 991
N+ E + + L ++++YC+N +CRR L L + E+FD +C K CDNC +
Sbjct: 472 TGYNRVASSGRLLETNTENLLRMVRYCENEVECRRFLQLVHLGEKFDSTNCKKTCDNCCS 531
Query: 992 SSNIVYQTKDVTEESKDIANLIKSIQDSKVTLIHCQDVYKGSKYQKIVQLGHHQSPYHGM 1051
S +++ KDVT ++ + L+K + + + H +VY+GS Q + + H +HG
Sbjct: 532 SQSLI--DKDVTLITRQLVELVKQTGE-RFSSAHILEVYRGSLNQMVKKHRHETLQFHGA 588
Query: 1052 GKDWKKADIERIFFKLVTERILNE 1075
GK K ++ RI LVTE IL E
Sbjct: 589 GKHLSKIEVSRILHYLVTEDILVE 612
>At1g60930 [L] KOG0351 ATP-dependent DNA helicase
Length = 1031
Score = 382 bits (981), Expect = e-105
Identities = 228/626 (36%), Positives = 335/626 (53%), Gaps = 62/626 (9%)
Query: 467 TVAVHSEEFEPLSDTDLEEFDAEREDQTQFDEIKELDDDLKIISEAKLDAEDVPLSFAIK 526
++ H+ ++E T+LE + + T E D ++P + +
Sbjct: 314 SIPSHNTQYETPQTTNLEVVYGQTDSPTHVKEQ----------GRCVTDNWNMPRDYLVS 363
Query: 527 KEPKSLDTQLQTELVPVPEVIEDDDFSMADLEPYMEETEKCTRENSVQPQYAWTS--EMY 584
KE + + + V EVI+ D TE + + WT E+Y
Sbjct: 364 KERYDISSGSEEREQSVSEVIDVTD------------TESSNDKKWTSSDFPWTKNLEVY 411
Query: 585 HKLRHVFGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTSGTTIV 644
+KL VFG SFRPNQ E +NAT+ G D F LPA++ +G T+V
Sbjct: 412 NKL--VFGNHSFRPNQREIINATMSGCDVF--------------LPALL----CAGITLV 451
Query: 645 VSPLISLMQDQVEHLLAKDIKASMFSS-KGTAEQRRMTFNLFMN-GLLELVYISPEMIKA 702
+SPL+SL+QDQ+ +LL +I A+ S+ AEQ + L +L+Y++PE +
Sbjct: 452 ISPLVSLIQDQIMNLLQTNISAASLSAGMEWAEQLEILQELSSEKSKYKLLYVTPEKVAK 511
Query: 703 SVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTAT 762
S + + L LAR V+DEAHCVS WGHDFRPDY+ L KQ++P+IPM+ALTAT
Sbjct: 512 SESLLRHLEILNSRSLLARFVIDEAHCVSQWGHDFRPDYQGLGVLKQKFPNIPMLALTAT 571
Query: 763 ASEQVRMDIIHNLQLNNPVFLKQSFNRTNLFYQVLKKEKNSIFQMCDMIRTKFKNQTGII 822
A+ V+ D++ L L N V +QSFNR NL+Y V+ K + + IR ++ GII
Sbjct: 572 ATTSVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKTNKCLEDIDKFIRENHFDECGII 631
Query: 823 YCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGID 882
YC S+ CE+ + ++ G K AFYH MDP +R VQ+ W D + +ICATVAFGMGI+
Sbjct: 632 YCLSRMDCEKVTEALRVFGHKAAFYHGSMDPGKRAFVQKQWSKDEINIICATVAFGMGIN 691
Query: 883 KPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQKD------ 936
KPDVRFV H ++P+++EGY+QE GRAGRDG S C++YYS+ D ++ MI +
Sbjct: 692 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYTDYIRVKHMISQGGLGQGQ 751
Query: 937 -------KNLDMINKEKHLDKLQQVMQYCDNRTDCRRQLVLSYFNEQFDPKDCGKNCDNC 989
K E + + L +++ YC+N DCRR L L + E+FD +C CDNC
Sbjct: 752 MKMGYNCKASSGRMLETNTENLLRMVSYCENEVDCRRFLQLVHLGEKFDSTNCKNTCDNC 811
Query: 990 KNSSNIVYQTKDVTEESKDIANLIKSIQDSKVTLIHCQDVYKGSKYQKIVQLGHHQSPYH 1049
+S ++ KDVT ++ + L+K + + + H ++Y+GS Q + + H
Sbjct: 812 SSSKILI--DKDVTVIARQLVALVK-LTGERFSSAHIVEIYRGSLNQSVKRNRQDTLHLH 868
Query: 1050 GMGKDWKKADIERIFFKLVTERILNE 1075
G GK K++ RI LVTE IL E
Sbjct: 869 GAGKHLTKSEASRILHYLVTEDILAE 894
>CE13130_2 [L] KOG0351 ATP-dependent DNA helicase
Length = 873
Score = 381 bits (978), Expect = e-105
Identities = 213/551 (38%), Positives = 323/551 (57%), Gaps = 28/551 (5%)
Query: 582 EMYHKLRHVFGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTSGT 641
E+Y L+ FG + FR Q + + +TL G D FVLMPTG GKSLCYQLPA++ G
Sbjct: 119 ELYDTLKSKFGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAVI----LPGV 174
Query: 642 TIVVSPLISLMQDQVEHLLAKDIKASMFSSK-GTAEQRRMTFNLFM-NGLLELVYISPEM 699
T+VVSPL SL++DQ + I ++ G Q ++ L N ++L+Y++PE
Sbjct: 175 TVVVSPLRSLIEDQKMKMKELGIGCEALTADLGAPAQEKIYAELGSGNPSIKLLYVTPEK 234
Query: 700 IKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEY--PDIPMI 757
I AS + L+ G LAR V+DEAHCVS WGHDFRPDY +LS +++Y P +P+I
Sbjct: 235 ISASGRLNSVFFDLHRRGLLARFVIDEAHCVSQWGHDFRPDYTKLSSLREKYANPPVPII 294
Query: 758 ALTATASEQVRMDIIHNLQLNNPVFLKQSFNRTNLFYQVLKKEKNSIFQMCDMIRTKFKN 817
ALTATA+ ++ D +L++ N SF R NL Y ++ K S+ + + ++ +
Sbjct: 295 ALTATATPKIVTDARDHLKMQNSKLFISSFVRDNLKYDLIPKAARSLINVVEKMKQLYPG 354
Query: 818 QTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAF 877
++GI+YC S+ CE ++ K G+ YHAG++ + R VQ+ W A++ VICAT+AF
Sbjct: 355 KSGIVYCLSRKECETVQMMLTKAGLSAEVYHAGLNDNLRVSVQRSWIANKFDVICATIAF 414
Query: 878 GMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQKDK 937
GMGIDKPDVRFV H+++P+++EGYYQETGRAGRDG S C+M YS+ D ++ MI++
Sbjct: 415 GMGIDKPDVRFVIHYSLPKSIEGYYQETGRAGRDGMPSYCLMLYSYHDSIRLRRMIEEGN 474
Query: 938 NLDMINKEKHLDKLQQVMQYCDNRTDCRRQLVLSYFNEQFDPKDCGKN---CDNC----K 990
+ + HL+ + QV+ YC+N + CRR++++ +F E +D + C + CD C K
Sbjct: 475 TTTGV-RSMHLNNVLQVVAYCENVSVCRRKMLVEHFGEVYDEQSCRNSKTPCDICERQRK 533
Query: 991 NSSNIVYQTKDVTEESKDIANLIKSIQDSKVTLIHCQDVYKGSKYQK----IVQLGHHQS 1046
N+ I + DV+ ++ I + +Q K TL + ++Y+G+ +K ++LGH +
Sbjct: 534 NAEAI--RLFDVSTDALSILKCLPRMQ--KATLKYISELYRGALIKKSQEQAMRLGHTKL 589
Query: 1047 PYHGMGKDWKKADIERIFFKLVTERILNE--YSVSTGRGFFSTYVKLGPRAKDLFKGK-- 1102
P++ G+ + D R KLV E ++E YSV Y +L +DL GK
Sbjct: 590 PFYSKGQGMSEQDALRFVRKLVIEGYIHERLYSVPNQAAAVFAYAELTEAGRDLANGKKT 649
Query: 1103 LKVEIRFVATE 1113
KV + V E
Sbjct: 650 AKVYLHIVTCE 660
>Hs14591902 [R] KOG0353 ATP-dependent DNA helicase
Length = 649
Score = 373 bits (957), Expect = e-102
Identities = 206/593 (34%), Positives = 329/593 (54%), Gaps = 43/593 (7%)
Query: 524 AIKKEPKSLDTQLQTELVPVPEVIEDDDFSMADLEPYMEETEKCTRENSV---------- 573
A+ +E S+ ++L + + E+ E + + ++ ++C ++
Sbjct: 6 ALTEELDSITSELHAVEIQIQELTERQQELIQKKKVLTKKIKQCLEDSDAGASNEYDSSP 65
Query: 574 ----QPQYAWTSEMYHKLRHVFGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQL 629
+ + W+ ++ L++VF L+ FRP QLE +N T+ GK+ F++MPTGGGKSLCYQL
Sbjct: 66 AAWNKEDFPWSGKVKDILQNVFKLEKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCYQL 125
Query: 630 PAIVKSGRTSGTTIVVSPLISLMQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMN-- 687
PA+ + G T+V+ PLISLM+DQ+ L I A+M ++ + E + +N
Sbjct: 126 PALC----SDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKN 181
Query: 688 GLLELVYISPEMIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFF 747
L+L+Y++PE I S + K YE + RI VDE HC S WGHDFRPDYK L
Sbjct: 182 SELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGIL 241
Query: 748 KQEYPDIPMIALTATASEQVRMDIIHNLQLNNPVFLKQSFNRTNLFYQVLKKEKNS---I 804
K+++P+ +I LTATA+ V D L + SFNR NL+Y+V +K N+ I
Sbjct: 242 KRQFPNASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDFI 301
Query: 805 FQMCDMIRTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQ 864
+ +I ++K Q+GIIYC S+ EQ + +Q G+ YHA ++P+++ V + W
Sbjct: 302 EDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRKWS 361
Query: 865 ADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFR 924
A+ +QV+ ATVAFGMGIDKPDVRFV H ++ +++E YYQE+GRAGRD + CI+YY F
Sbjct: 362 ANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFG 421
Query: 925 DVRTIQTMIQKDKNLDMINKEKHLDKLQQVMQYCDNRTDCRRQLVLSYFNEQFDPKDCGK 984
D+ I +M+ + + KL +++ YC N + CRR L+ +F+E ++ + C K
Sbjct: 422 DIFRISSMV--------VMENVGQQKLYEMVSYCQNISKCRRVLMAQHFDEVWNSEACNK 473
Query: 985 NCDNCKNSSNIVYQTKDVTEESKDIANLIKSIQD--SKVTLIHCQDVYKGSKYQKIVQLG 1042
CDNC S ++ K++TE +D+ ++K ++ K+T + D + G K+ G
Sbjct: 474 MCDNCCKDS--AFERKNITEYCRDLIKILKQAEELNEKLTPLKLIDSWMGKGAAKLRVAG 531
Query: 1043 HHQSPYHGMGKDWKKADIERIFFKLVTERILNEYSVSTGRGFFSTYVKLGPRA 1095
+ + D+E+I + ++ L E T S Y+K+GP+A
Sbjct: 532 -------VVAPTLPREDLEKIIAHFLIQQYLKEDYSFTAYATIS-YLKIGPKA 576
>At3g05740 [L] KOG0351 ATP-dependent DNA helicase
Length = 624
Score = 370 bits (950), Expect = e-102
Identities = 205/535 (38%), Positives = 313/535 (58%), Gaps = 26/535 (4%)
Query: 472 SEEFEPLSDTDLEEFDAEREDQTQFDEIKELDDDLK-------IISEAKLDAEDVPLSFA 524
+E F+ ++ FD + +D E+ ++D + + ++ D EDV F
Sbjct: 102 AEMFDKSTNPSDNGFDTDDDDDDSRVEVHVIEDSPEPKKKPEIVELDSSSDLEDVETRFK 161
Query: 525 IKKEPKSLDTQLQTELVPVPEVIEDDDFSMADLEPYMEETEKCTRENSVQPQYAWTSEMY 584
+ + ++ + + ED +++ +P ++ + K S + A +
Sbjct: 162 VPRRSQTCSRSMDYSM-------EDSVSTISGRKPSVQISNKDHETPSYEELQALDDLEF 214
Query: 585 HKLRHVFGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTSGTTIV 644
L +FG FRP Q +A A+++ KD FVLMPTGGGKSLCYQLPA +K+G TIV
Sbjct: 215 ANLV-IFGNKVFRPLQHQACRASMERKDCFVLMPTGGGKSLCYQLPATLKAG----VTIV 269
Query: 645 VSPLISLMQDQVEHLLAK-DIKASMFSSKGTAEQRRMTFNLFM--NGLLELVYISPEMIK 701
+SPL+SL+QDQ+ L K I A+ +S+ T+ Q N +L+Y++PE I
Sbjct: 270 ISPLLSLIQDQIVALNLKFGIPATFLNSQQTSSQAAAVLQELRRDNPSCKLLYVTPEKIA 329
Query: 702 ASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTA 761
S + + L G LA VVDEAHCVS WGHDFRPDY+EL KQ +P +P++ALTA
Sbjct: 330 GSSSFLETLRCLDRKGLLAGFVVDEAHCVSQWGHDFRPDYRELGCLKQNFPRVPVMALTA 389
Query: 762 TASEQVRMDIIHNLQLNNPVFLKQSFNRTNLFYQVLKKEKNSIFQMCDMIRTKFKNQTGI 821
TA+E V D++ +L++ LK SF+R NL Y+V+ K K + Q+ +++R +FK+Q+GI
Sbjct: 390 TATESVCQDVLKSLRIPRAPVLKMSFDRINLKYEVIVKTKEPLKQLQELLRDRFKDQSGI 449
Query: 822 IYCHSKNSCEQTSALM-QKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMG 880
+YC SK+ C + + +K VK +YHAG+ +R VQ+ WQ V+++CAT+AFGMG
Sbjct: 450 VYCLSKSECVDVAKFLNEKCKVKTVYYHAGVPAKQRVDVQRKWQTGEVRIVCATIAFGMG 509
Query: 881 IDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQKDKNLD 940
IDK DVRFV H T+ + +E YYQE+GRAGRDG +QCI Y +D + M++ + +
Sbjct: 510 IDKADVRFVIHNTLSKAVESYYQESGRAGRDGLQAQCICLYQKKDFSRVVCMLRNGQGRN 569
Query: 941 MINKEKHLDKLQQVMQYCDNRTDCRRQLVLSYFNEQFDPKDCGKN---CDNCKNS 992
M + + + +++ QYC+ +T+CRRQ++L YF E FD C + CDNC+ S
Sbjct: 570 MDRFKSAMAQAKKMQQYCELKTECRRQMLLEYFGESFDRMICKSSLNPCDNCERS 624
>At1g31360 [R] KOG0353 ATP-dependent DNA helicase
Length = 714
Score = 336 bits (861), Expect = 2e-91
Identities = 200/557 (35%), Positives = 302/557 (53%), Gaps = 61/557 (10%)
Query: 577 YAWTSEMYHKLRHVFGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSG 636
+ W S +VFG+ +R NQ E +NA + G+D V+M GGGKSLCYQLPA+++ G
Sbjct: 71 FEWDSRADDVRFNVFGISKYRANQKEIINAIMTGRDVLVIMAAGGGKSLCYQLPAMLRGG 130
Query: 637 RTSGTTIVVSPLISLMQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGL--LELVY 694
TT+VVSPL+SL+QDQV L A I A M +S E + + G L+++Y
Sbjct: 131 ----TTLVVSPLLSLIQDQVMGLAALGISAYMLTSTSGKENEKFVYKALEKGEDDLKILY 186
Query: 695 ISPEMIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDI 754
++PE + S + + K + G+L+ I +DEAHC S WGHDFRPDYK LS K ++P +
Sbjct: 187 VTPEKVSKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLSILKTQFPKV 246
Query: 755 PMIALTATASEQVRMDIIHNLQLNNPVFLKQSFNRTNLFYQVLKKE---KNSIFQMCDMI 811
PM+ALTATA+++V+ D+I L + V S NR NLFY V +K K + ++ + I
Sbjct: 247 PMVALTATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLFYSVREKSAVGKLVVDEIAEFI 306
Query: 812 RTKF-KNQTGIIYCHSKNSCEQ-------------TSALMQKNGVKCAFYHAGMDPDERF 857
R + N++GI+YC S+ CEQ T MQ CA PD
Sbjct: 307 RESYSNNESGIVYCFSRKECEQVIYESEGFLLIITTQTWMQ----ICAKKFICALPDFLL 362
Query: 858 QVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQC 917
W +++QVI TVAFGMGI+KPDVRFV H ++ +++E YYQE+GRAGRDG S+C
Sbjct: 363 CHVHRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSEC 422
Query: 918 IMYYSFRDVRTIQTMIQKDKNLDMINKEKHLDKLQQVMQYCDNRTDCRRQLVLSYFNEQF 977
I+++ DV +M+ + L L +++YC ++T CRR +F E
Sbjct: 423 ILFFRSADVPRQSSMV--------FYEYSGLQNLYDIVRYCQSKTKCRRSAFFRHFGE-- 472
Query: 978 DPKDCG-----KNCDNCKNSSNIVYQTKDVTEESKDIANLIKSIQ--DSKVTLIHCQDVY 1030
+DC + CDNC SS + + DV++ SK + ++++ Q D +VT++ D
Sbjct: 473 PSQDCNGILVYRMCDNCALSSEV--KEVDVSDLSKLVVSMVQETQAKDQRVTMLQLGDKL 530
Query: 1031 KGSKYQKIVQLGHHQSPYHGMGKDWKKADIERIFFKLVTERILNEYSVSTGRGFFSTYVK 1090
+ I +L K+ ++E + KL+ + +L E T + YV
Sbjct: 531 RNKHKDLIAEL--------------KRDEVEHLVIKLIVDSVLKEEFQHTPYS-TNAYVT 575
Query: 1091 LGPRAKDLFKGKLKVEI 1107
+GP A L +G+ +++
Sbjct: 576 MGPLANQLLQGRKTIKM 592
>CE26682 [R] KOG0353 ATP-dependent DNA helicase
Length = 674
Score = 308 bits (790), Expect = 3e-83
Identities = 169/490 (34%), Positives = 264/490 (53%), Gaps = 64/490 (13%)
Query: 577 YAWTSEMYHKLRHVFGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSG 636
+ W+ E L+ F L+ FRP Q A+NA + +DA V++ TGGGKSLCYQLPA++
Sbjct: 91 FPWSDEATKILKEQFHLEKFRPLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL--- 147
Query: 637 RTSGTTIVVSPLISLMQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMN--GLLELVY 694
+G +VVSPLISL++DQ+ L + I +S ++ + E+ + + N L+Y
Sbjct: 148 -ANGLALVVSPLISLVEDQILQLRSLGIDSSSLNANTSKEEAKRVEDAITNKDSKFRLLY 206
Query: 695 ISPEMIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDI 754
++PE + S + + K G L I +DE HC S WGHDFR DY L+ K+++ +
Sbjct: 207 VTPEKLAKSKKMMNKLEKSLSVGFLKLIAIDEVHCCSQWGHDFRTDYSFLNVLKRQFKGV 266
Query: 755 PMIALTATASEQVRMDIIHNLQLNNPVFLKQSFNRTNLFYQVLKK---EKNSIFQMCDMI 811
P++ LTATA+ V D+ L + + + FNR+NL Y+V++K E ++ I
Sbjct: 267 PILGLTATATSNVLDDVKDMLGIQAALTFRAGFNRSNLKYKVVQKPGSEDECTEEIAKTI 326
Query: 812 RTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVI 871
+ F QTGIIYC S+N CE+ + ++ +G+K YHA M+P +R Q W + ++QVI
Sbjct: 327 KRDFAGQTGIIYCLSRNDCEKVAKALKSHGIKAKHYHAYMEPVDRSGAHQGWISGKIQVI 386
Query: 872 CATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQ---------------------------- 903
ATVAFGMGIDKP+VRFV H ++P+++E YYQ
Sbjct: 387 VATVAFGMGIDKPNVRFVIHHSLPKSIENYYQASARILLRMTKQKNKSDTGGSTQINILE 446
Query: 904 ---------------ETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQKDKNLDMINKEKHL 948
E+GRAGRDG + CI+YY D+ +M+Q+++ +
Sbjct: 447 VCTNFKIFFAVFSEKESGRAGRDGQPATCILYYRLADIFKQSSMVQQERT--------GI 498
Query: 949 DKLQQVMQYCDNRTDCRRQLVLSYFNEQFDPKDCGKNCDNCKNSSNIV----YQTKDVTE 1004
L +++Y + + CRR + +F E ++P C K CD C+N + V ++ DV+E
Sbjct: 499 QNLYNMVRYAADSSTCRRVKLAEHFEEAWEPSWCQKQCDTCENGNGFVGTSSKESTDVSE 558
Query: 1005 ESKDIANLIK 1014
+K +I+
Sbjct: 559 AAKTTVRIIE 568
>7294377 [L] KOG0352 ATP-dependent DNA helicase
Length = 1058
Score = 290 bits (741), Expect = 1e-77
Identities = 177/485 (36%), Positives = 273/485 (55%), Gaps = 44/485 (9%)
Query: 578 AWTSEMYHKLRHVFGLDSFRPN-QLEAVNATLQGK-DAFVLMPTGGGKSLCYQLPAIVKS 635
A S ++ L+ FG F+ + Q +AV ++ K D +V MPTG GKSLC+QLP ++
Sbjct: 2 AHESAVHEALKKHFGHSKFKSDLQEKAVKCAVKKKQDVYVSMPTGSGKSLCFQLPGLMSE 61
Query: 636 GRTSGTTIVVSPLISLMQDQVEHLLAKDIKASMFSSK-GTAEQRRMTFNL-FMNGLLELV 693
+ TIV SPL++L++DQ++HL + A +SK T E+ R+ +L + L+ +
Sbjct: 62 NQI---TIVFSPLLALIKDQIDHLTKLKVPADSLNSKMSTKERDRVIMDLKAVRTNLKFL 118
Query: 694 YISPEMIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPD 753
YI+PE A+ + + L++H KLA VDEAHCVS WGHDFRPDY +L + +Y D
Sbjct: 119 YITPEQA-ATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHDFRPDYLKLGELRSKYSD 177
Query: 754 IPMIALTATASEQVRMDIIHNLQLNNPV--FLKQSFNRTNLFYQVLKKE--KNSIFQMCD 809
+ +ALTATAS +V+ DI L+L+ PV F SF R NLFY ++ K ++ + D
Sbjct: 178 VIWLALTATASREVKEDIYKQLRLHQPVAQFSTPSF-RKNLFYDIVYKNSIEDDFQHLAD 236
Query: 810 MIR------TKFKNQT------GIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERF 857
R +FK+ GI+YC +++ E+ + + K G+ YHAG+ ER
Sbjct: 237 FARHCLGNPKEFKDTPKPQRGCGIVYCRTRDQVERMAIGVTKQGIGAVAYHAGLKTGERT 296
Query: 858 QVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQC 917
+VQ+ W +ICAT +FGMG+DKP VRFV H+ VP+ + YYQE+GRAGRDG S C
Sbjct: 297 EVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAYYQESGRAGRDGLQSYC 356
Query: 918 IMYYSFRDVRTIQTMIQKD------KNLDMINKEKHLDKLQQVMQYCDNRTDCRRQLVLS 971
+YY DVR+I+ ++Q D + + E+ + + +++ ++C+ RT CR +L
Sbjct: 357 RLYYGREDVRSIRFLLQNDAHRARGRGDKELLTERAIKQFEKITEFCE-RTTCRHKLFSD 415
Query: 972 YFNEQFDPKDCGKNCDNCKNSSNIVYQTKDVTEESKDIAN--LIKSIQDSKVTLIHCQDV 1029
+F + DC CD CK E++ +I + + S ++L C D+
Sbjct: 416 FFGD--PTPDCSGQCDVCKRPKK--------AEKALEIFHRLCMDDAFKSHISLQDCADL 465
Query: 1030 YKGSK 1034
Y+G +
Sbjct: 466 YEGGR 470
>Hs4759032 [L] KOG0352 ATP-dependent DNA helicase
Length = 410
Score = 280 bits (717), Expect = 9e-75
Identities = 160/364 (43%), Positives = 218/364 (58%), Gaps = 19/364 (5%)
Query: 587 LRHVFGLDSFR-PNQLEAVNATLQG-KDAFVLMPTGGGKSLCYQLPAIVKSGRTSGTTIV 644
L+ VFG DSF+ P Q A A ++G KD FV MPTG GKSLCYQLPA++ G TIV
Sbjct: 20 LKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGAGKSLCYQLPALL----AKGITIV 75
Query: 645 VSPLISLMQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGL--LELVYISPEMIKA 702
VSPLI+L+QDQV+HLL ++ S +SK +A++R+ +++YI+PEM A
Sbjct: 76 VSPLIALIQDQVDHLLTLKVRVSSLNSKLSAQERKELLADLEREKPQTKILYITPEMA-A 134
Query: 703 SVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTAT 762
S + ++ L L+ +VVDEAHCVS WGHDFRPDY L + P +ALTAT
Sbjct: 135 SSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFRPDYLRLGALRSRLGHAPCVALTAT 194
Query: 763 ASEQVRMDIIHNLQLNNPVFL-KQSFNRTNLFYQVLKKE---------KNSIFQMCDMIR 812
A+ QV+ D+ L L PV + K R NLFY V KE K+ +
Sbjct: 195 ATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDVQFKELISDPYGNLKDFCLKALGQEA 254
Query: 813 TKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVIC 872
K + GI+YC ++ +CEQ + + GV YHAG+ ER VQ DW ++V VI
Sbjct: 255 DKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAYHAGLKASERTLVQNDWMEEKVPVIV 314
Query: 873 ATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTM 932
AT++FGMG+DK +VRFV H+ + +++ GYYQE+GRAGRDG S C +YYS D + +
Sbjct: 315 ATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFL 374
Query: 933 IQKD 936
I+K+
Sbjct: 375 IRKE 378
>CE00941 [L] KOG0352 ATP-dependent DNA helicase
Length = 809
Score = 268 bits (685), Expect = 4e-71
Identities = 157/433 (36%), Positives = 233/433 (53%), Gaps = 46/433 (10%)
Query: 600 QLEAVNATLQGK-DAFVLMPTGGGKSLCYQLPAIVKSGRTSGTTIVVSPLISLMQDQVEH 658
Q++A+N L+ K D +V +PTG GKSLCYQLPA+V G T+V+SPLI+LM+DQ+
Sbjct: 183 QMQAINCILKRKCDVYVSLPTGAGKSLCYQLPAVVHGG----ITVVISPLIALMKDQISS 238
Query: 659 LLAKDIKASMFSSK-GTAEQRRMTFNLFMNG-LLELVYISPEMIKASVQCKKAISKLYEH 716
L K I +S T E+ R+ L + ++Y++ E + A+ KK ++ L
Sbjct: 239 LKRKGIPCETLNSTLTTVERSRIMGELAKEKPTIRMLYLTAEGV-ATDGTKKLLNGLANR 297
Query: 717 GKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVRMDIIHNLQ 776
L IVVDEAHCV+ WGHDFRPDY L + P +P +ALTATA+ + + DI L+
Sbjct: 298 DVLRYIVVDEAHCVTQWGHDFRPDYLTLGSLRDVCPGVPWVALTATANAKAQDDIAFQLK 357
Query: 777 LNNPVFLKQSFNRTNLFYQVLKKEKNSIFQMCDMIRTKFKNQ------------------ 818
L NP K R NLFY S C + K +
Sbjct: 358 LRNPESFKSGTYRDNLFYD---NHMASFITKCLTVDAKTSSSNLTKHEKAERSQNKKTFT 414
Query: 819 -TGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAF 877
+ I+YC S+N C Q + +++ G+ YHAG+ +R +VQ+ W + + V+ ATVAF
Sbjct: 415 GSAIVYCRSRNECGQVAKMLEIAGIPAMAYHAGLGKKDRNEVQEKWMNNEIPVVAATVAF 474
Query: 878 GMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQ--- 934
GMGIDKPDVR V H++ + L GYYQE GRAGRDG S C +YYS +D + ++
Sbjct: 475 GMGIDKPDVRAVIHWSPSQNLAGYYQEAGRAGRDGKRSYCRIYYSKQDKNALNFLVSGEL 534
Query: 935 -------KDKNLDMINKEKHLDKLQ----QVMQYCDNRTDCRRQLVLSYFNEQFDPKDCG 983
K N + E + +Q ++++YC++ CR + S+F++ + + C
Sbjct: 535 AKLREKAKKNNAEGEKAEMQIKSIQTGLAKMLEYCES-ARCRHVSIASFFDDT-ECRPCK 592
Query: 984 KNCDNCKNSSNIV 996
NCD C++ + +
Sbjct: 593 TNCDYCRDPTKTI 605
>Hs5739524_2 [L] KOG0351 ATP-dependent DNA helicase
Length = 900
Score = 248 bits (634), Expect = 4e-65
Identities = 166/510 (32%), Positives = 270/510 (52%), Gaps = 36/510 (7%)
Query: 587 LRHVFGLDSFRPNQLEAVNATLQGK-DAFVLMPTGGGKSLCYQLPAIVKSGRTSGTTIVV 645
L+ FG SF+P Q + +++ L+ + D +M TG GKSLC+Q P + +V+
Sbjct: 8 LKMYFGHSSFKPVQWKVIHSVLEERRDNVAVMATGYGKSLCFQYPPVY----VGKIGLVI 63
Query: 646 SPLISLMQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQ 705
SPLISLM+DQV L +I A G+A+ + ++ + G +VY++PE ++
Sbjct: 64 SPLISLMEDQVLQLKMSNIPACFL---GSAQSENVLTDIKL-GKYRIVYVTPEYCSGNMG 119
Query: 706 CKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASE 765
+ +L + I VDEAHC+S WGHDFR +++L K P +P++ALTATAS
Sbjct: 120 L---LQQLEADIGITLIAVDEAHCISEWGHDFRDSFRKLGSLKTALPMVPIVALTATASS 176
Query: 766 QVRMDIIHNLQLNNPVFLKQSFNRTNLFYQVLKKEKNSIFQMCD-MIRT----KFKNQTG 820
+R DI+ L L NP F+R NL+ +V +K N + + +++T +F+ T
Sbjct: 177 SIREDIVRCLNLRNPQITCTGFDRPNLYLEVRRKTGNILQDLQPFLVKTSSHWEFEGPT- 235
Query: 821 IIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMG 880
IIYC S+ +Q + ++K + C YHAGM R + + D +Q + AT+AFGMG
Sbjct: 236 IIYCPSRKMTQQVTGELRKLNLSCGTYHAGMSFSTRKDIHHRFVRDEIQCVIATIAFGMG 295
Query: 881 IDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQKDKNLD 940
I+K D+R V H+ P+ +E YYQE GRAGRDG S C + ++ D+ + ++ + +N
Sbjct: 296 INKADIRQVIHYGAPKDMESYYQEIGRAGRDGLQSSCHVLWAPADINLNRHLLTEIRNEK 355
Query: 941 M-INKEKHLDKLQQVMQYCDNRTDCRRQLVLSYF-NEQFDPKDCG-----KNCDNCKNSS 993
+ K K + K+++ + + + CRRQ++LS+F ++Q G K CDNC++
Sbjct: 356 FRLYKLKMMAKMEKYL----HSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCRSRL 411
Query: 994 NIVYQTKDVTEESKDIA----NLIKSIQ--DSKVTLIHCQDVYKGSKYQKIVQLGHHQSP 1047
+ Y D + S D L+ ++ K + +GS Q++ S
Sbjct: 412 DHCYSMDDSEDTSWDFGPQAFKLLSAVDILGEKFGIGLPILFLRGSNSQRLADQYRRHSL 471
Query: 1048 YHGMGKDWKKADIERIFFKLVTERILNEYS 1077
+ G GKD ++ + +L+TE L E S
Sbjct: 472 F-GTGKDQTESWWKAFSRQLITEGFLVEVS 500
>At1g27880 [L] KOG0351 ATP-dependent DNA helicase
Length = 941
Score = 202 bits (515), Expect = 2e-51
Identities = 122/373 (32%), Positives = 201/373 (53%), Gaps = 32/373 (8%)
Query: 587 LRHVFGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTSGTTIVVS 646
L V+G DSFR QL+A+ L G +++PTG GKSLCYQ+PA++ G T+VVS
Sbjct: 261 LNLVYGYDSFRDGQLQAIKMILGGSSTMLVLPTGAGKSLCYQIPAMI----LPGITLVVS 316
Query: 647 PLISLMQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQC 706
PL+SLM DQ++HL IK + SS E+ T G+++++++SPE +
Sbjct: 317 PLVSLMIDQLKHL-PSIIKGGLLSSSQRPEEATETLRKLKEGIIKVLFVSPERLLNV--- 372
Query: 707 KKAISKLYEHGKLARIVVDEAHCVS-------------------NWGHDFRPDYKEL--S 745
+ +S ++ +VVDEAHCVS N H+FRP Y L S
Sbjct: 373 -EFLSMFRMSLSVSLVVVDEAHCVSECIYCLSLFCLSWLLRAILNRSHNFRPSYMRLKAS 431
Query: 746 FFKQEYPDIPMIALTATASEQVRMDIIHNLQLNNPVFLKQSFNRTNLFYQVLKKEKNSIF 805
E ++A+TATA+ ++ +L++ + +++S R N V N +
Sbjct: 432 MLFSELKAECILAMTATATTMTLQAVMSSLEIPSTNLIQKSQLRDNFELSVSLSGANRMK 491
Query: 806 QMCDMIRTK-FKN-QTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDW 863
+ ++ + +K ++ I+YC + + S ++ N + YH+G+ +R ++Q+ +
Sbjct: 492 DLLILMESPPYKEIRSIIVYCKFQYETDMISKYLRDNNINAKGYHSGLPAKDRVRIQESF 551
Query: 864 QADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSF 923
+++++V+ ATVAFGMG+DK DV V HF+VP ++E Y QE GRAGRDG S C ++Y
Sbjct: 552 CSNKIRVVVATVAFGMGLDKGDVGAVIHFSVPGSMEEYVQEIGRAGRDGRLSYCHLFYDN 611
Query: 924 RDVRTIQTMIQKD 936
++++ D
Sbjct: 612 DTYLKLRSLAHSD 624
>7295152 [L] KOG0351 ATP-dependent DNA helicase
Length = 1579
Score = 202 bits (513), Expect = 4e-51
Identities = 147/503 (29%), Positives = 239/503 (47%), Gaps = 66/503 (13%)
Query: 462 LPQDHTVAVHSEEFEPLSDTDLEEFDAEREDQTQFDEIKELDDDLKIISEAKLDAEDVPL 521
LPQ A+ L +L E + + ++ + +E+++ D E +D E +
Sbjct: 736 LPQAANAAI-------LQGDELNESEEDDQESSGDEEVQQHPDPNWSSDEMDVDFEALDA 788
Query: 522 SF-AIKKEPKSLDTQLQTELVPVPEVIEDDDFSMADLEPYMEETEKCTRENSVQPQYAW- 579
+ A +P S + V I ++ A L+ + + ++ V+P Y
Sbjct: 789 AVEASLSQPVSQEKAASPIKTYVGHKIPEEFLKQAGLDTTASSSNR-SQHGGVKPLYDLL 847
Query: 580 --------TSEMYHKLRHVFGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPA 631
T E+ L H+FG +FR Q A+ TL G + V + TG GKSLCYQLPA
Sbjct: 848 PDGSVQDTTPEVLEAL-HMFGHTNFRKGQDRAIMRTLSGLSSLVTLSTGSGKSLCYQLPA 906
Query: 632 IVKSGRTSGTTIVVSPLISLMQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLE 691
+ S + T+V+SPL+SLM+DQV + ++A + TA QR + NG ++
Sbjct: 907 YLYSRKVGAITLVISPLVSLMEDQVTGV-PHFLRAHCLHTNQTAPQRMKIQQMIANGEID 965
Query: 692 LVYISPEMIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKEL-SFFKQE 750
++ +SPE + A + + L + +A +DEAHCVS W H+FRP Y + ++
Sbjct: 966 ILLVSPEAVVAGERATGFGAILRQLPPIAFACIDEAHCVSQWSHNFRPSYLMICKVLRKN 1025
Query: 751 YPDIPMIALTATASEQVRMDIIHNLQL---------------NNPVFLKQSFNRTNLFYQ 795
++ LTATA+ R+ II++L + N + + + NR Q
Sbjct: 1026 LGVRTVLGLTATATLPTRVSIINHLGISDGERGIISDIPLPDNLVLSVSKDENRDAALLQ 1085
Query: 796 VLKKEKNSIFQMCDMIRTKFKNQTGIIYCHSKNSCEQTSALMQ----------------- 838
+L E+ F+ C I IIYC ++ CE+ + ++
Sbjct: 1086 LLNSER---FEPCQSI---------IIYCTRRDECERIAGFIRTCVQDRREPTQDQTKKR 1133
Query: 839 -KNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRT 897
+ + YHAGM R VQ+ + ++ ++++ AT+AFGMGI+KPD+R V H+ +PR
Sbjct: 1134 KRVNWQAEPYHAGMPASRRRTVQKAFMSNELRIVVATIAFGMGINKPDIRAVIHYNMPRN 1193
Query: 898 LEGYYQETGRAGRDGNFSQCIMY 920
E Y QE GRAGRDG S C ++
Sbjct: 1194 FESYVQEIGRAGRDGLPSHCHLF 1216
>CE02651 [L] KOG0351 ATP-dependent DNA helicase
Length = 986
Score = 191 bits (485), Expect = 7e-48
Identities = 123/355 (34%), Positives = 185/355 (51%), Gaps = 35/355 (9%)
Query: 528 EPKSLDTQLQTELV--PVPEVIEDDDFSMADLEPYMEETEKCTRENSVQPQYAWTSEMYH 585
+P+ +D+ L +L + ++D +F P ++E K + P E +
Sbjct: 162 DPEFMDSVLDNQLTIKGKKQFLDDGEFFTDRNVPQIDEATKMKWASMTSPP----QEALN 217
Query: 586 KLRHVFGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTSGTTIVV 645
L FG FR Q + V L GKD FVLM TG GKS+CYQLP+++ + T+VV
Sbjct: 218 ALNEFFGHKGFREKQWDVVRNVLGGKDQFVLMSTGYGKSVCYQLPSLL----LNSMTVVV 273
Query: 646 SPLISLMQDQVEHLLAKDIKASMFSSKGT-AEQRRMTFNLFMNGLLELVYISPEMIKAS- 703
SPLISLM DQV L++K I A T E ++ N+ + +Y+SPEM+ +
Sbjct: 274 SPLISLMNDQVTTLVSKGIDAVKLDGHSTQIEWDQVANNMHR---IRFIYMSPEMVTSQK 330
Query: 704 -----VQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFF--KQEYPDIPM 756
C+K IS L +DEAHCVS WGHDFR Y+ L+ + + +IPM
Sbjct: 331 GLELLTSCRKHISLL---------AIDEAHCVSQWGHDFRNSYRHLAEIRNRSDLCNIPM 381
Query: 757 IALTATASEQVRMDIIHNLQLNNPVFLKQSFNRTNLFYQVLKK----EKNSIFQMCDMIR 812
IALTATA+ +VR D+I NL+L P+ SF+R NL+ V E +F D ++
Sbjct: 382 IALTATATVRVRDDVIANLRLRKPLITTTSFDRKNLYISVHSSKDMAEDLGLFMKTDEVK 441
Query: 813 TKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADR 867
+ IIYC +K + + ++++ GV+ A YHAG+ ++R + D+ D+
Sbjct: 442 GRHFGGPTIIYCQTKQMVDDVNCVLRRIGVRSAHYHAGLTKNQREKAHTDFMRDK 496
>At4g35740_2 [L] KOG0351 ATP-dependent DNA helicase
Length = 625
Score = 185 bits (469), Expect = 5e-46
Identities = 112/352 (31%), Positives = 182/352 (50%), Gaps = 41/352 (11%)
Query: 650 SLMQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGL--LELVYISPEMIKASVQCK 707
+LM++QV L K I A SS + +G + L+Y++PE+I
Sbjct: 33 ALMENQVMALKEKGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIATKGFML 92
Query: 708 KAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQV 767
K + KL+ G L I +DE I + + +V
Sbjct: 93 K-LRKLHSRGLLNLIAIDE------------------------------IFFSTSILCRV 121
Query: 768 RMDIIHNLQLNNPVFLKQSFNRTNLFYQVLKKE--KNSIFQMCDMIRTKFKNQTGIIYCH 825
+ D+I +L L NP+ LK SFNR N+FY+V K+ N+ + +++++ N IIYC
Sbjct: 122 QKDVIDSLNLRNPLVLKSSFNRPNIFYEVRYKDLLDNAYTDLGNLLKS-CGNICAIIYCL 180
Query: 826 SKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPD 885
+ +C+ S + G+ A YHAG++ R V DW + + Q+I ATVAFGMGIDK D
Sbjct: 181 ERTTCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMGIDKKD 240
Query: 886 VRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQKDKNLDMINKE 945
VR V HF +P+++E +YQE+GRAGRD S+ ++YY D + ++ +++ +N + +
Sbjct: 241 VRMVCHFNIPKSMESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYLLRNSENKKSSSSK 300
Query: 946 KHLDKLQQVMQYCDNRTDCRRQLVLSYFNEQFDPKDCGKNCDNCKNSSNIVY 997
K +Q++ YC+ + CRR+ +L F E+ C K CD CK+ + + +
Sbjct: 301 KPTSDFEQIVTYCEG-SGCRRKKILESFGEE----QCKKTCDACKHPNQVAH 347
>Hs4759030 [L] KOG0351 ATP-dependent DNA helicase
Length = 1208
Score = 181 bits (459), Expect = 7e-45
Identities = 134/441 (30%), Positives = 203/441 (45%), Gaps = 36/441 (8%)
Query: 527 KEPKSLDTQLQTELVPVPEVIEDDDFSMADLEPYMEETEKCTRENSVQP----------- 575
KE L+ Q P ++D EP + + S+ P
Sbjct: 400 KESCFLNEQFDHWAAQCPRPASEEDTDAVGPEPLVPSPQPVPEVPSLDPTVLPLYSLGPS 459
Query: 576 -QYAWTSEMYHKLRHVFGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVK 634
Q A T + G +FRP Q AV L G +++PTG GKSLCYQLPA++
Sbjct: 460 GQLAETPAEVFQALEQLGHQAFRPGQERAVMRILSGISTLLVLPTGAGKSLCYQLPALLY 519
Query: 635 SGRTSGTTIVVSPLISLMQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVY 694
S R+ T+VVSPL+SLM DQV L +KA+ S T +QR + ++
Sbjct: 520 SRRSPCLTLVVSPLLSLMDDQVSGL-PPCLKAACIHSGMTRKQRESVLQKIRAAQVHVLM 578
Query: 695 ISPEMIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDI 754
++PE + + A + +A +DEAHC+S W H+FRP Y + +E +
Sbjct: 579 LTPEALVGAGGLPPAA----QLPPVAFACIDEAHCLSQWSHNFRPCYLRVCKVLRERMGV 634
Query: 755 P-MIALTATASEQVRMDIIHNLQL-NNPVFLKQSFNRTNLFYQVLKKEKNSIFQMCDMIR 812
+ LTATA+ + D+ +L + P + TNL V + +
Sbjct: 635 HCFLGLTATATRRTASDVAQHLAVAEEPDLHGPAPVPTNLHLSVSMDRDTDQALLTLLQG 694
Query: 813 TKFKNQTGII-YCHSKNSCEQTSALMQK--------------NGVKCAFYHAGMDPDERF 857
+F+N II YC+ + E+ +AL++ YHAGM ER
Sbjct: 695 KRFQNLDSIIIYCNRREDTERIAALLRTCLHAAWVPGSGGRAPKTTAEAYHAGMCSRERR 754
Query: 858 QVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQC 917
+VQ+ + +++V+ ATVAFGMG+D+PDVR V H +P + E Y Q GRAGRDG + C
Sbjct: 755 RVQRAFMQGQLRVVVATVAFGMGLDRPDVRAVLHLGLPPSFESYVQAVGRAGRDGQPAHC 814
Query: 918 IMYY--SFRDVRTIQTMIQKD 936
++ D+R ++ + D
Sbjct: 815 HLFLQPQGEDLRELRRHVHAD 835
>At5g27680 [L] KOG0351 ATP-dependent DNA helicase
Length = 819
Score = 141 bits (355), Expect = 8e-33
Identities = 109/343 (31%), Positives = 174/343 (49%), Gaps = 39/343 (11%)
Query: 510 SEAKLDAEDVPLSFAIKKEPKSLDT----QLQTELVPVPEVIEDDDFSMADLEPYMEETE 565
SE+K + + ++ + K DT ++ ++L V E E+ S+A + +ME +
Sbjct: 78 SESKRQSSLLDHFRSVNQNKKKGDTFGTVEVDSQLETVSEHSEEVRKSLAPV--FMESS- 134
Query: 566 KCTRENSV-----QPQYAWTSEMYHKLRHVFGLDSFRPNQLEAVNATLQGKDAFVLMPTG 620
C E + + +W + LR+ FG+ S R Q EA++ + KD VL TG
Sbjct: 135 -CFPEGQLLNGCSEASSSWEKRVNSILRNRFGISSLRSFQREALSTWVAHKDCLVLAATG 193
Query: 621 GGKSLCYQLPAIVKSGRTSGTTIVVSPLISLMQDQVEHLLAKDIKASMFSSKGTAEQRRM 680
GKSLC+Q+PA++ T +V+SPLISLM DQ L + A G+ +
Sbjct: 194 SGKSLCFQIPALL----TGKVVVVISPLISLMHDQCLKLSRHKVSACFL---GSGQLDNC 246
Query: 681 TFNLFMNGLLELVYISPEMIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPD 740
M G+ +++Y+ PE + V+ K + KL + +A +DEAHCVS WGHDFRP
Sbjct: 247 IEEKAMQGMYQIIYVCPETV---VRLIKPLQKLAKTHGIALFAIDEAHCVSKWGHDFRPH 303
Query: 741 YKELSFFKQEY---------PDIPMIALTATASEQVRMDIIHNLQLNNPVFLKQSFNRTN 791
Y++LS ++ + D+P++ALTATA+ V+ DI+ +L L+ + + +RT
Sbjct: 304 YRKLSVLRENFCASNLEFLEYDVPIMALTATATVNVQEDILESLHLSKETKIVK-HSRTK 362
Query: 792 LFYQVLKKEKNSIFQMCDMIRTKFKNQTG-IIYCHSKNSCEQT 833
K +N + D+ K KN TG + S+ S EQT
Sbjct: 363 FASSYAKDFQN----LVDLYSEK-KNSTGKKLAVISRESEEQT 400
Score = 95.1 bits (235), Expect = 7e-19
Identities = 57/172 (33%), Positives = 91/172 (52%), Gaps = 17/172 (9%)
Query: 865 ADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFR 924
A V+ AT+AFGMGIDK +VR + H+ ++LE YYQE GRAGRDG ++C++Y
Sbjct: 513 AYNASVVVATIAFGMGIDKKNVRKIIHYGWLQSLEAYYQEAGRAGRDGELAECVLY---A 569
Query: 925 DVRTIQTMIQKDKNLDMINKEKHLDKLQQVMQYCDNRTDCRRQLVLSYFNEQFDPKDCGK 984
D+ T++ ++ + E+ L +Y N + CR ++++ YF E+F K C
Sbjct: 570 DLSRAPTLLPSRRSKE--QTEQAYKMLSDCFRYGMNTSQCRAKILVEYFGEEFSSKKC-N 626
Query: 985 NCDNCKNSSNIVYQTKDVTEESKDIANLIKSIQDSKVTLIHCQDVYKGSKYQ 1036
+CD C + DV EE ANL+ + +T H + + + Y+
Sbjct: 627 SCDVCTEGPP---ELVDVREE----ANLLFQV----ITAFHVDNDSEHAPYE 667
>SPAC212.11 [L] KOG0351 ATP-dependent DNA helicase
Length = 1887
Score = 110 bits (275), Expect = 2e-23
Identities = 112/381 (29%), Positives = 180/381 (46%), Gaps = 37/381 (9%)
Query: 569 RENSVQPQYAWTSEMYHKLRHVFGLDS-FRP-NQLEAVNATLQGK-DAFVLMPTGGGKSL 625
R +QP L +GL++ FR Q ++V +L + + ++PTGGGKSL
Sbjct: 1162 RPGLLQPSQTSVQHCCWALSQYYGLEAKFRSLKQFQSVYFSLLNRMNLITVLPTGGGKSL 1221
Query: 626 CYQLPAIVKSGR-TSG-----TTIVVSPLISLMQDQVEHLLAKDIKASMFSSKGTA-EQR 678
+ +PA+++ R T G T+V+ P++SL QD + + K + S TA +
Sbjct: 1222 SFLIPALIEKKRQTPGKVMNMVTLVLVPMMSLRQDMMLRVNEKGLLVC--SGNWTAFKDV 1279
Query: 679 RMTFNLFMNGLLELVYISPEMIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFR 738
R+T + L L Y S + + ++ ++++ L G+LAR+V+DEAH + G +R
Sbjct: 1280 RLTLETQLPDLFILTYESA-LTNSGLRFFESLATL---GRLARVVIDEAHLLLTSGA-WR 1334
Query: 739 PDYKELSFFKQEYPDIPMIALTATASEQVRMDIIHNLQLNNPVFLKQSFNRTNLFYQVLK 798
S Y P+ L+AT Q+ M N V + S R N+FY L
Sbjct: 1335 TALSRASRLSGLYA--PLHLLSATFPRQLEMVARQTFCTNFYVLRETSTARENIFY-FLH 1391
Query: 799 KEKNSIFQM---CDMIRTKFKNQTG--IIYCHSKNSCEQTSALMQKNGV----KCAFYHA 849
N+ F + M RTK G II+C +K E + ++ + Y
Sbjct: 1392 PYDNTEFLLDLRTLMKRTKVFEGDGRAIIFCRTKKDVEYIHRRLHQSDLFAHTHVTIYTG 1451
Query: 850 GMDPDERFQVQQDWQADR-----VQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQE 904
+ +ER Q ++ A R +++ AT AFG+GI+ VR V H+ +P + Y QE
Sbjct: 1452 DVSDEER---QMNFDAFRNANGKTRIMIATKAFGLGINYMGVRLVVHYGLPASSMDYVQE 1508
Query: 905 TGRAGRDGNFSQCIMYYSFRD 925
TGRAGRDG ++ ++Y D
Sbjct: 1509 TGRAGRDGKYAIAALFYEKYD 1529
>At2g45810 [A] KOG0326 ATP-dependent RNA helicase
Length = 528
Score = 80.1 bits (196), Expect = 2e-14
Identities = 83/341 (24%), Positives = 142/341 (41%), Gaps = 21/341 (6%)
Query: 592 GLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVK----SGRTSGTTIVVSP 647
G + P Q E++ L G D G GK+ + +P + K + +V +
Sbjct: 173 GFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEKIDPENNVIQAVILVPTR 232
Query: 648 LISLMQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCK 707
++L QV L+K +K + + G R L+ + L+ +P I K
Sbjct: 233 ELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLYQP--VHLLVGTPGRILDLA--K 288
Query: 708 KAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQV 767
K + L + A +V+DEA + + +F+P +EL F E I M + T V
Sbjct: 289 KGVCVLKD---CAMLVMDEADKLLSV--EFQPSIEELIQFLPESRQILMFSATFP----V 339
Query: 768 RMDIIHNLQLNNPVFLKQSFNRTNLF---YQVLKKEKNSIFQMCDMIRTKFKNQTGIIYC 824
+ + L P + T + Y +E+ + + + + +K + II+C
Sbjct: 340 TVKSFKDRYLKKPYIINLMDQLTLMGVTQYYAFVEERQKVHCL-NTLFSKLQINQSIIFC 398
Query: 825 HSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKP 884
+S N E + + + G C + HA M D R +V D++ + + T F GID
Sbjct: 399 NSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQ 458
Query: 885 DVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRD 925
V V +F PRT E Y GR+GR G+ + ++ D
Sbjct: 459 AVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYED 499
>CE00839 [A] KOG0326 ATP-dependent RNA helicase
Length = 430
Score = 79.3 bits (194), Expect = 4e-14
Identities = 84/356 (23%), Positives = 149/356 (41%), Gaps = 31/356 (8%)
Query: 592 GLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRT----SGTTIVVSP 647
G + P Q ++ L G+D G GK+ Y +P I K IV +
Sbjct: 62 GWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTR 121
Query: 648 LISLMQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCK 707
++L Q+ L+K I+ + + G + R L NG + LV +P I ++
Sbjct: 122 ELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRL--NGTVHLVIATPGRILDLME-- 177
Query: 708 KAISKLYEHGKLARIVVDEAHCVSNWGH--------DFRPDYKELSFFKQEYPDIPMIAL 759
K ++K+ EH K +V+DEA + + +F P +++ + +P+
Sbjct: 178 KGVAKM-EHCKT--LVLDEADKLLSQDFQGILDRLINFLPKERQVMLYSATFPN------ 228
Query: 760 TATASEQVRMDIIHNLQLNNPVFLKQSFNRTNLFYQVLKKEKNSIFQMCDMIRTKFKNQT 819
T T+ Q M + + L + L Y +EK + + + R NQ+
Sbjct: 229 TVTSFMQKHMHKPYEINLMEELTLLGVTQ-----YYAFVQEKQKVHCLNTLFRKLQINQS 283
Query: 820 GIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGM 879
II+C+S E + + + G C + H+ M + R +V D++ + + +
Sbjct: 284 -IIFCNSTQRVELLAKKITEIGYSCYYIHSKMAQNHRNRVFHDFRQGNCRNLVCSDLLTR 342
Query: 880 GIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQK 935
GID V V +F PR E Y GR+GR G+ I ++ D T++ + Q+
Sbjct: 343 GIDIQAVNVVINFDFPRNAETYLHRIGRSGRFGHLGVAINLITYEDRHTLRRIEQE 398
>At2g33730 [A] KOG0333 U5 snRNP-like RNA helicase subunit
Length = 733
Score = 78.6 bits (192), Expect = 6e-14
Identities = 104/482 (21%), Positives = 194/482 (39%), Gaps = 54/482 (11%)
Query: 488 AEREDQTQFDEIKELDDDLKIISEA-----KLDAEDVPLSFAIKKEPKSLDTQLQTELVP 542
A + ++ DEI++ D ++ EA + +A D SF ++ + D +L+ E+
Sbjct: 231 AAKHEKEMRDEIRKKDGIVEKPEEAAAQRVREEAADTYDSFDMRVDRHWSDKRLE-EMTE 289
Query: 543 VPEVIEDDDFSMADLEPYMEETEKCTRENSVQPQYAWTSEMYHKLRHVFGLDSFRPNQLE 602
I +DF+++ + + E+ + TSE+ + G P Q+
Sbjct: 290 RDWRIFREDFNISYKGSRIPRPMRSWEESKL------TSELLKAVERA-GYKKPSPIQMA 342
Query: 603 AVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGR---------TSGTTIVVSPLISLMQ 653
A+ LQ +D + TG GK+ + LP + R T G VV +
Sbjct: 343 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELA 402
Query: 654 DQVEHLLAKDIK------ASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCK 707
Q+E K S+ + EQ L + E+V +P + ++ +
Sbjct: 403 QQIEEETVKFAHYLGFRVTSIVGGQSIEEQ-----GLKITQGCEIVIATPGRLIDCLERR 457
Query: 708 KAISKLYEHGKLARIVVDEAHCVSNWGH--------DFRPDYKELSFFKQEYPDIPMIAL 759
A+ + +V+DEA + + G D P ++E D I
Sbjct: 458 YAVLNQCNY-----VVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYR 512
Query: 760 TA---TASEQVRMDIIHNLQLNNPVFLK--QSFNRTNLFYQ--VLKKEKNSIFQMCDMIR 812
T +A+ ++ + L NPV + + T+L Q ++ KE F++ ++
Sbjct: 513 TTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKTTDLISQHVIMMKESEKFFRLQKLL- 571
Query: 813 TKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVIC 872
+ +T I++ ++K +C+ + + K G + H G ++R + ++A R V+
Sbjct: 572 DELGEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLV 631
Query: 873 ATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTM 932
AT G GID PDV V ++ +P+ +E Y GR GR G + + D +
Sbjct: 632 ATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLTLHDTEVFYDL 691
Query: 933 IQ 934
Q
Sbjct: 692 KQ 693
>Hs4758138 [A] KOG0331 ATP-dependent RNA helicase
Length = 614
Score = 77.4 bits (189), Expect = 1e-13
Identities = 83/352 (23%), Positives = 156/352 (43%), Gaps = 33/352 (9%)
Query: 600 QLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSG------RTSGTT-IVVSPLISLM 652
Q + L G D + TG GK+L Y LPAIV R G +V++P L
Sbjct: 121 QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELA 180
Query: 653 QDQVEHLLAKDIKASMFSSK---GTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCKKA 709
Q QV+ + A+ +A S G A + +L +E+ +P + ++C K
Sbjct: 181 Q-QVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERG--VEICIATPGRLIDFLECGKT 237
Query: 710 ISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVRM 769
+ + +V+DEA + + G F P +++ Q PD + +AT ++VR
Sbjct: 238 NLR-----RTTYLVLDEADRMLDMG--FEPQIRKI--VDQIRPDRQTLMWSATWPKEVRQ 288
Query: 770 ---DIIHNLQLNNPVFLKQSFNRT-----NLFYQVLKKEKNSIFQMCDMIRTKFKNQTGI 821
D + + N L+ S N ++ + V K EK + ++ + I ++ +N+T I
Sbjct: 289 LAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEK--LIRLMEEIMSEKENKT-I 345
Query: 822 IYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGI 881
++ +K C++ + M+++G H ER V +++ + ++ AT G+
Sbjct: 346 VFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGL 405
Query: 882 DKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMI 933
D DV+FV ++ P + E Y GR R +++ +++ + +I
Sbjct: 406 DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLI 457
>Hs5453840_1 [A] KOG0331 ATP-dependent RNA helicase
Length = 469
Score = 76.6 bits (187), Expect = 2e-13
Identities = 84/353 (23%), Positives = 155/353 (43%), Gaps = 29/353 (8%)
Query: 598 PNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSG------RTSGTT-IVVSPLIS 650
P Q + L G+D + TG GK+L Y LPAIV R G +V++P
Sbjct: 117 PIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRE 176
Query: 651 LMQDQVEHLLAKDIKASMFSSK---GTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCK 707
L Q QV+ + K S S G A + +L +E+ +P + ++
Sbjct: 177 LAQ-QVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERG--VEICIATPGRLIDFLESG 233
Query: 708 KAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQV 767
K + + +V+DEA + + G F P +++ Q PD + +AT ++V
Sbjct: 234 KTNLR-----RCTYLVLDEADRMLDMG--FEPQIRKI--VDQIRPDRQTLMWSATWPKEV 284
Query: 768 RM---DIIHNLQLNNPVFLKQSFNRT--NLFYQVLKKEKN-SIFQMCDMIRTKFKNQTGI 821
R D + + N L+ S N + ++ EK+ + Q+ + I + +N+T I
Sbjct: 285 RQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKT-I 343
Query: 822 IYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGI 881
I+ +K C+ + M+++G H ER V ++++ + ++ AT G+
Sbjct: 344 IFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGL 403
Query: 882 DKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQ 934
D DV+FV ++ P + E Y GR R N +++ +++ + +I+
Sbjct: 404 DVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIK 456
>YDL160c [A] KOG0326 ATP-dependent RNA helicase
Length = 506
Score = 75.5 bits (184), Expect = 5e-13
Identities = 72/338 (21%), Positives = 135/338 (39%), Gaps = 15/338 (4%)
Query: 592 GLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKS----GRTSGTTIVVSP 647
G + P Q EA+ + G+D G GK+ + +P + K + +V +
Sbjct: 65 GFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTR 124
Query: 648 LISLMQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCK 707
++L QV L K S + G R L N + ++ +P +
Sbjct: 125 ELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRL--NETVHILVGTPGRV-----LD 177
Query: 708 KAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQV 767
A K+ + + ++DEA + + DF+ +++ F P + +AT V
Sbjct: 178 LASRKVADLSDCSLFIMDEADKMLS--RDFKTIIEQILSFLP--PTHQSLLFSATFPLTV 233
Query: 768 RMDIIHNLQLNNPVFLKQSFNRTNLFYQVLKKEKNSIFQMCDMIRTKFKNQTGIIYCHSK 827
+ ++ +L + L + + E+ + + +K + II+C+S
Sbjct: 234 KEFMVKHLHKPYEINLMEELTLKGITQYYAFVEERQKLHCLNTLFSKLQINQAIIFCNST 293
Query: 828 NSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVR 887
N E + + G C + HA M ER +V +++ +V+ + + GID V
Sbjct: 294 NRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVN 353
Query: 888 FVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRD 925
V +F P+T E Y GR+GR G+ I ++ D
Sbjct: 354 VVINFDFPKTAETYLHRIGRSGRFGHLGLAINLINWND 391
>At5g14610 [A] KOG0331 ATP-dependent RNA helicase
Length = 713
Score = 74.7 bits (182), Expect = 9e-13
Identities = 85/358 (23%), Positives = 154/358 (42%), Gaps = 30/358 (8%)
Query: 592 GLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIV------KSGRTSGTTIVV 645
G + P Q ++ +Q +D + TG GK+L Y +P + R T +V+
Sbjct: 248 GFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRMGPTILVL 307
Query: 646 SPLISLM-QDQVEHL-LAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKAS 703
SP L Q QVE L K K S G A + + +++V +P +
Sbjct: 308 SPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERG--VDIVVATPGRLNDI 365
Query: 704 VQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIAL-TAT 762
++ K+ L++ ++ +V+DEA + + G F P +++ E P + TAT
Sbjct: 366 LEMKRI--SLHQ---VSYLVLDEADRMLDMG--FEPQIRKIV---NEVPTKRQTLMYTAT 415
Query: 763 ASEQVRM---DIIHN---LQLNNPVFLKQSFNRTNLFYQVLKKEKNSIFQMCDMIRTKFK 816
++VR D++ N + + N L + + T + EK+S + ++R++
Sbjct: 416 WPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQ--ILRSQEP 473
Query: 817 NQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVA 876
II+C +K C+Q + + + A H ER V +++ R V+ AT
Sbjct: 474 GSKIIIFCSTKRMCDQLARNLTRT-FGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDV 532
Query: 877 FGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQ 934
G+D D+R V ++ P +E Y GR GR G ++ +D + +I+
Sbjct: 533 AARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIK 590
>ECU02g0670 [A] KOG0335 ATP-dependent RNA helicase
Length = 503
Score = 74.3 bits (181), Expect = 1e-12
Identities = 65/332 (19%), Positives = 140/332 (41%), Gaps = 22/332 (6%)
Query: 600 QLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTSGT-TIVVSPLISLMQDQVEH 658
Q + + + G++ PTG GK++C+ +P I + + ++SP L + Q+
Sbjct: 124 QKYCIPSLVDGRNLICRAPTGMGKTMCFLIPIIERHRQMKKPQACIISPTRELCE-QIRV 182
Query: 659 LLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCKKAISKLYEHGK 718
+K + S +++ +L +++V +P + + KK + +
Sbjct: 183 EASKLVAGSRIRVVSIYGKKQ---DLPSYSGVDIVVATPGRLIDLLHRKKV-----DLSE 234
Query: 719 LARIVVDEAHCVSNWG--------HDFRPDYKELSFFKQEY-PDIPMIALTATASEQVRM 769
+ V+DEA + + G H F P + F Y P + + ++V +
Sbjct: 235 IRMFVLDEADKLLDMGFEIPIREIHGFVPKNTQTCLFSATYSPKLTRMINYFLPEDKVSI 294
Query: 770 DIIHNLQLNNPVFLKQSFNRTNLFYQVLKKEKNSIFQMCDMIRTKFKNQTGIIYCHSKNS 829
+I N + + N+ + +LK + R + + +++ K+
Sbjct: 295 EISSETLKNIRQEIVEVRNKKKMLLNILKGPD---INLKGSWRMEVQPDKVLVFVERKSE 351
Query: 830 CEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFV 889
C + +++K+G+ C H + +R + + ++ R V+ AT GID DV+ V
Sbjct: 352 CGEVEKVLKKSGILCVSLHGDKEQADRDEALKGFRNGRFPVMVATSVAARGIDIKDVKLV 411
Query: 890 FHFTVPRTLEGYYQETGRAGRDGNFSQCIMYY 921
++ +P+ ++ Y GR GR+G + I +Y
Sbjct: 412 INYDIPKDIKEYIHRIGRTGREGKSGKSISFY 443
>At5g63120 [A] KOG0331 ATP-dependent RNA helicase
Length = 564
Score = 74.3 bits (181), Expect = 1e-12
Identities = 79/359 (22%), Positives = 154/359 (42%), Gaps = 43/359 (11%)
Query: 598 PNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIV------KSGRTSGTTIVV-SPLIS 650
P Q + L+G+D + TG GK+L Y LPA+V + G+ G +++ +P
Sbjct: 163 PIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLILAPTRE 222
Query: 651 LMQDQVEHLLAKDIKASMFSS--KGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCKK 708
L E +++ + S+ G A + +L +E+V +P + ++C+
Sbjct: 223 LAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRG--VEIVIATPGRLIDMLECQH 280
Query: 709 AISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVR 768
K ++ +V+DEA + + G F P +++ Q PD + +AT +V
Sbjct: 281 TNLK-----RVTYLVLDEADRMLDMG--FEPQIRKI--VSQIRPDRQTLLWSATWPREV- 330
Query: 769 MDIIHNLQLNNPVFLKQSFNRTNLFYQVLKKEKNSIFQMCDMIRTKFK------------ 816
+ + L +P K T+L K SI Q+ +++ T K
Sbjct: 331 -ETLARQFLRDPY--KAIIGSTDL------KANQSINQVIEIVPTPEKYNRLLTLLKQLM 381
Query: 817 -NQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATV 875
+I+ +K C+Q + ++ +G H ER +V ++++ R ++ AT
Sbjct: 382 DGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATD 441
Query: 876 AFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQ 934
G+D D++ V ++ P TLE Y GR GR G +++ + + + +++
Sbjct: 442 VAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVK 500
>At3g01540 [A] KOG0331 ATP-dependent RNA helicase
Length = 619
Score = 73.9 bits (180), Expect = 2e-12
Identities = 84/359 (23%), Positives = 154/359 (42%), Gaps = 32/359 (8%)
Query: 592 GLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIV------KSGRTSGTTIVV 645
G + P Q ++ +QG+D + TG GK+L Y +P + R T +V+
Sbjct: 177 GFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTILVL 236
Query: 646 SPLISLMQDQVEHLLAKDIKASMFSSK---GTAEQRRMTFNLFMNGLLELVYISPEMIKA 702
SP L Q++ K ++S S G A + +L ++V +P +
Sbjct: 237 SPTRELAT-QIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGA--DIVVATPGRLND 293
Query: 703 SVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTAT 762
++ ++ + +++ +V+DEA + + G F P +++ K+ + TAT
Sbjct: 294 ILEMRRISLR-----QISYLVLDEADRMLDMG--FEPQIRKI--VKEIPTKRQTLMYTAT 344
Query: 763 ASEQVRM---DIIHN---LQLNNPVFLKQSFNRTNLFYQVLKKEKNSIFQMCDMIRTKFK 816
+ VR D++ N + + N L + + T V EK + ++R++
Sbjct: 345 WPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQ--ILRSQEP 402
Query: 817 NQTGIIYCHSKNSCEQ-TSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATV 875
II+C +K C+Q T L ++ G A H ER V +++ R V+ AT
Sbjct: 403 GSKVIIFCSTKRMCDQLTRNLTRQFGA--AAIHGDKSQPERDNVLNQFRSGRTPVLVATD 460
Query: 876 AFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQ 934
G+D D+R V ++ P +E Y GR GR G Q ++ +D + +I+
Sbjct: 461 VAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIK 519
>At4g00660 [A] KOG0326 ATP-dependent RNA helicase
Length = 499
Score = 73.6 bits (179), Expect = 2e-12
Identities = 82/363 (22%), Positives = 148/363 (40%), Gaps = 22/363 (6%)
Query: 592 GLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTSGTTIVVSPLISL 651
G + P Q E++ L G+D G GK+ + +P + K + + ++ +
Sbjct: 150 GFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDNN--VIQGNCVLD 207
Query: 652 MQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCKKAIS 711
QV L K +K + + G + L+ + L+ +P I KK +
Sbjct: 208 HTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQP--VHLLVGTPGRILDLT--KKGVC 263
Query: 712 KLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVRMDI 771
L + L V+DEA + + +F+P + L F E I M + T + + D
Sbjct: 264 VLKDCSVL---VMDEADKLLS--QEFQPSVEHLISFLPESRQILMFSATFPVTVKDFKDR 318
Query: 772 IHNLQLNNPVFLKQSFNRT----NLFYQVLKKEKNSIFQMCDMIRTKFKNQTGIIYCHSK 827
L NP + T FY +++ + + + +K + II+C+S
Sbjct: 319 F----LTNPYVINLMDELTLKGITQFYAFVEERQK--IHCLNTLFSKLQINQSIIFCNSV 372
Query: 828 NSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVR 887
N E + + + G C + HA M D R +V D++ + + T F GID V
Sbjct: 373 NRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVN 432
Query: 888 FVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQKDKNLDMINKEKH 947
V +F P+ E Y GR+GR G+ + ++ D R I+++ ++ H
Sbjct: 433 VVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYED-RFNLYRIEQELGTEIKQIPPH 491
Query: 948 LDK 950
+D+
Sbjct: 492 IDQ 494
>At3g61240 [A] KOG0326 ATP-dependent RNA helicase
Length = 498
Score = 73.2 bits (178), Expect = 3e-12
Identities = 77/338 (22%), Positives = 136/338 (39%), Gaps = 15/338 (4%)
Query: 592 GLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTSGTT----IVVSP 647
G + P Q E++ L G D G GK+ + +P + K + +V +
Sbjct: 143 GFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNNNVIQAMILVPTR 202
Query: 648 LISLMQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCK 707
++L QV L+K + + + G R L + L+ +P I K
Sbjct: 203 ELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQP--VHLLVGTPGRILDLT--K 258
Query: 708 KAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQV 767
K + L + A +V+DEA + + +F+P +EL F + M + T + +
Sbjct: 259 KGVCVLKD---CAMLVMDEADKLLS--AEFQPSLEELIQFLPQNRQFLMFSATFPVTVKA 313
Query: 768 RMDIIHNLQLNNPVFLKQSFNRTNLFYQVLKKEKNSIFQMCDMIRTKFKNQTGIIYCHSK 827
D +L+ + L + E+ + + +K + II+C+S
Sbjct: 314 FKD--RHLRKPYVINLMDQLTLMGVTQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSV 371
Query: 828 NSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVR 887
N E + + + G C + HA M D R +V +++ + + T F GID V
Sbjct: 372 NRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVN 431
Query: 888 FVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRD 925
V +F PRT E Y GR+GR G+ + ++ D
Sbjct: 432 VVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYED 469
>At1g20920 [A] KOG0334 RNA helicase
Length = 1166
Score = 73.2 bits (178), Expect = 3e-12
Identities = 97/479 (20%), Positives = 195/479 (40%), Gaps = 50/479 (10%)
Query: 480 DTDLEEFDAEREDQTQFDEIKELDDDLKIISEAKLDAEDVPLSFAIKKEPKSLDTQLQTE 539
D+D + + + +D DE DD+ + K AE + L K E + E
Sbjct: 441 DSDSDYSEPKNDDDPSLDE----DDEEFMKRVKKTKAEKLSLVDHSKIEYEPFRKNFYIE 496
Query: 540 LVPVPEVIEDDDFSMADLEPYMEETE-KCTRENSVQPQYAW-----TSEMYHKLRHVFGL 593
+ + + +++ + Y +E E K ++ +P W TS++ ++ +
Sbjct: 497 VKDISRMTQEE------VNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKL-NY 549
Query: 594 DSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAI--------VKSGRTSGTTIVV 645
+ P Q +A+ + G+D + TG GK+L + LP + V++G +V+
Sbjct: 550 EKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAG-DGPIGLVM 608
Query: 646 SPLISLMQDQVEHLLAKDIK------ASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEM 699
+P L+Q Q+ + K K ++ G A+Q + G E+V +P
Sbjct: 609 APTRELVQ-QIHSDIRKFSKPLGIRCVPVYGGSGVAQQ----ISELKRGT-EIVVCTPGR 662
Query: 700 IKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIAL 759
+ + C + K+ ++ +V+DEA + + G F P + + P+ +
Sbjct: 663 M-IDILCTSS-GKITNLRRVTFLVMDEADRMFDMG--FEPQITRI--IQNIRPERQTVLF 716
Query: 760 TATASEQVRMDIIHNLQLNNPVFL----KQSFNRTNLFYQVLKKEKNSIFQMCDMIRTKF 815
+AT QV + + LN PV + + N+ ++ E + ++ +++
Sbjct: 717 SATFPRQV--ETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLELLGEWS 774
Query: 816 KNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATV 875
+ +++ S+ C+ M K+ C H G D +R D++ D ++ AT
Sbjct: 775 EKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATS 834
Query: 876 AFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQ 934
G+D ++ V +F P E Y GR GR G + + S D + +++
Sbjct: 835 VAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVK 893
>YDR291w [A] KOG4150 Predicted ATP-dependent RNA helicase
Length = 1077
Score = 71.2 bits (173), Expect = 1e-11
Identities = 104/490 (21%), Positives = 207/490 (42%), Gaps = 60/490 (12%)
Query: 476 EPLSDTDLEEFDAEREDQTQFDEIKELDDDLKIISEAKLDAEDVPLSFAIKKEPKSLDTQ 535
E L + L EF E+E + D EL + + + D ED P+ +K + +S +
Sbjct: 171 EALFKSRLREFILEKE-KANLDPFSELTNLAQKYIPRERDYED-PIEAMMKAKQESNEMS 228
Query: 536 L-----QTELVPVPEVIEDDDFSMADLEPYMEETEKCTRENSVQPQYAW-----TSEMYH 585
+ + + +P++IE + E Y + + C S +Y E+Y
Sbjct: 229 IPNYSNNSVITTIPQMIE----KLKSTEFYASQIKHCFTIPSRTAKYKGLCFELAPEVYQ 284
Query: 586 KLRHVFGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAI-VKSGRTSGTTIV 644
+ H ++F +Q +A+N+ QG++ + T GKSL YQL AI + T +
Sbjct: 285 GMEH----ENFYSHQADAINSLHQGENVIITTSTSSGKSLIYQLAAIDLLLKDPESTFMY 340
Query: 645 VSPLISLMQDQ---VEHLLAK--DIKASMFSS-KGTAEQRRMTFNLFMNGLLELVYISPE 698
+ P +L QDQ + +L+K ++K ++ + G E ++ +++ +P+
Sbjct: 341 IFPTKALAQDQKRAFKVILSKIPELKNAVVDTYDGDTEPEE---RAYIRKNARVIFTNPD 397
Query: 699 MIKASVQCKKAISKLYEHGKLARIVVDEAHCVSN-WGHDFRPDYKEL-----SFFKQEYP 752
MI S+ A + + + L +VVDE H +G + L F+ E
Sbjct: 398 MIHTSILPNHANWRHFLY-HLKLVVVDELHIYKGLFGSHVALVMRRLLRLCHCFY--ENS 454
Query: 753 DIPMIALTATASEQVRMDIIHNLQLNNPVFLKQSFNRTNLFYQVL----------KKEKN 802
+ I+ +AT V+ + +N + + + T + V+ +K +N
Sbjct: 455 GLQFISCSATLKSPVQ-HMKDMFGINEVTLIHEDGSPTGAKHLVVWNPPILPQHERKREN 513
Query: 803 SIFQMCD-MIRTKFKNQTGIIYCHSKNSCE----QTSALMQKNG-----VKCAFYHAGMD 852
I + +++ N I +C+ + CE + + + G + Y G
Sbjct: 514 FIRESAKILVQLILNNVRTIAFCYVRRVCELLMKEVRNIFIETGREDLVTEVMSYRGGYS 573
Query: 853 PDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDG 912
+R +++++ ++ + +T A +GID + V P ++ ++Q++GRAGR
Sbjct: 574 ASDRRKIEREMFHGNLKAVISTNALELGIDIGGLDAVLMCGFPLSMANFHQQSGRAGRRN 633
Query: 913 NFSQCIMYYS 922
N S ++ S
Sbjct: 634 NDSLTLVVAS 643
>7298989 [A] KOG0336 ATP-dependent RNA helicase
Length = 703
Score = 71.2 bits (173), Expect = 1e-11
Identities = 92/426 (21%), Positives = 173/426 (40%), Gaps = 53/426 (12%)
Query: 545 EVIEDDDFSMADLEPYMEETEKCT-------RENSVQPQY---AWTSE--------MYHK 586
E E + + +++E EE K T +E P WT E M +
Sbjct: 238 EAPEVANLTKSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFEQCFAEYPDMLEE 297
Query: 587 LRHVFGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIV--------KSGRT 638
+ + G P Q +A LQG D + TG GK+L + LP ++ + R
Sbjct: 298 ITKM-GFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRGTRG 356
Query: 639 SGTTIVVSPLISL---MQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYI 695
+V++P L ++ +V+ + +KA G R M + G E++
Sbjct: 357 GANVLVLAPTRELALQIEMEVKKYSFRGMKAVCVYGGGN---RNMQISDLERGA-EIIIC 412
Query: 696 SPEMIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIP 755
+P + + ++ + + + +V+DEA + + G F P +++ + PD
Sbjct: 413 TPGRLNDLI-----MANVIDVSTITYLVLDEADRMLDMG--FEPQIRKVMLDIR--PDRQ 463
Query: 756 MIALTATASEQVRMDIIHNLQLNNPVFL---KQSFNRTNLFYQVLKKEKNSIFQMCDMIR 812
I +AT VR + + NP+ + T+ Q++K ++ + + + I
Sbjct: 464 TIMTSATWPPGVRR--LAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKF-NTIT 520
Query: 813 TKFKNQTG----IIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRV 868
+ KN + II+C K + S+ + +G H D +R Q D ++ V
Sbjct: 521 SFVKNMSSTDKIIIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVV 580
Query: 869 QVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRT 928
+++ AT G+D D+ V ++ P +E Y GR GR G I +++ D
Sbjct: 581 RILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTGRAGRQGTSISFFTREDWAM 640
Query: 929 IQTMIQ 934
+ +I+
Sbjct: 641 AKELIE 646
>Hs4758140 [A] KOG0326 ATP-dependent RNA helicase
Length = 472
Score = 70.1 bits (170), Expect = 2e-11
Identities = 84/374 (22%), Positives = 162/374 (42%), Gaps = 23/374 (6%)
Query: 592 GLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAI----VKSGRTSGTTIVVSP 647
G + P Q E++ L G+D G GKS Y +P + +K IV +
Sbjct: 104 GWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTR 163
Query: 648 LISLMQDQVEHLLAKDIK-ASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQC 706
++L Q+ ++K + A + ++ G R L + + +V +P I +
Sbjct: 164 ELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRL--DDTVHVVIATPGRILDLI-- 219
Query: 707 KKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQ 766
KK ++K+ +H ++ IV+DEA + + DF +++ + I + + T S Q
Sbjct: 220 KKGVAKV-DHVQM--IVLDEADKLLS--QDFVQIMEDIILTLPKNRQILLYSATFPLSVQ 274
Query: 767 VRMDIIHNLQLNNPVFLKQSFNR---TNLFYQVLKKEKNSIFQMCDMIRTKFKNQTGIIY 823
M+ +LQ + L + T + V +++K + + ++ + II+
Sbjct: 275 KFMN--SHLQKPYEINLMEELTLKGVTQYYAYVTERQK---VHCLNTLFSRLQINQSIIF 329
Query: 824 CHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDK 883
C+S E + + + G C + HA M + R +V D++ + + T F GID
Sbjct: 330 CNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDI 389
Query: 884 PDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQKDKNLDMIN 943
V V +F P+ E Y GR+GR G+ I ++ D +++ I++ ++
Sbjct: 390 QAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKS-IEEQLGTEIKP 448
Query: 944 KEKHLDKLQQVMQY 957
++DK V +Y
Sbjct: 449 IPSNIDKSLYVAEY 462
>YNL112w [A] KOG0331 ATP-dependent RNA helicase
Length = 546
Score = 69.7 bits (169), Expect = 3e-11
Identities = 79/368 (21%), Positives = 147/368 (39%), Gaps = 33/368 (8%)
Query: 592 GLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTSGTTIVVSPLISL 651
G D Q + L G+D + TG GK+L Y LP IV P++ +
Sbjct: 132 GFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLV 191
Query: 652 MQDQVEHLLAKDIKASMFSSK---------GTAEQRRMTFNLFMNGLLELVYISPEMIKA 702
+ E + + S F G + + +L E+V +P +
Sbjct: 192 LAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGS--EIVIATPGRLID 249
Query: 703 SVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTAT 762
++ K K ++ +V+DEA + + G F P +++ Q PD + +AT
Sbjct: 250 MLEIGKTNLK-----RVTYLVLDEADRMLDMG--FEPQIRKI--VDQIRPDRQTLMWSAT 300
Query: 763 ASEQVRMDIIHNLQLNNPVF-------LKQSFNRTNLFYQVLKKEKNSIFQMCDMIRTKF 815
++V+ + LN+P+ L S N T + V EK ++
Sbjct: 301 WPKEVKQ--LAADYLNDPIQVQVGSLELSASHNITQIVEVVSDFEKRDRLNKYLETASQD 358
Query: 816 KNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATV 875
+I+ +K C+ + ++++G H D ER V Q+++ R ++ AT
Sbjct: 359 NEYKTLIFASTKRMCDDITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATD 418
Query: 876 AFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRD----VRTIQT 931
GID + +V ++ +P +E Y GR GR G I +++ ++ + I
Sbjct: 419 VAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLGAKLISI 478
Query: 932 MIQKDKNL 939
M + ++N+
Sbjct: 479 MREANQNI 486
>CE01341 [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 402
Score = 69.3 bits (168), Expect = 4e-11
Identities = 72/355 (20%), Positives = 150/355 (41%), Gaps = 25/355 (7%)
Query: 587 LRHVFGLDSFRPNQLE--AVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTSG--TT 642
LR ++G +P+ ++ A+ GKD +G GK+ + + + +
Sbjct: 41 LRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQA 100
Query: 643 IVVSPLISLMQD--QVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMI 700
+V++P L Q +V L + + ++ G R L + +V +P +
Sbjct: 101 LVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAG--IHVVVGTPGRV 158
Query: 701 KASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALT 760
+ + ++ V+DEA + + G F+ E+ F+ D+ ++ L+
Sbjct: 159 GDMIN-----RNALDTSRIKMFVLDEADEMLSRG--FKDQIYEV--FRSMPQDVQVVLLS 209
Query: 761 ATASEQVRMDIIHNLQLNNPVFLKQSFNRTNL-----FYQVLKKEKNSIFQMCDMIRTKF 815
AT +V +D+ + + NP+ + + L FY ++K++ +CD+
Sbjct: 210 ATMPSEV-LDVTNRF-MRNPIRILVKKDELTLEGIRQFYINVQKDEWKFDCLCDLYNVVN 267
Query: 816 KNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATV 875
Q +I+C+++ + + M +N + H MD ER + +++++ +V+ T
Sbjct: 268 VTQA-VIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTD 326
Query: 876 AFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQ 930
GID V V ++ +P E Y GR+GR G I + + D R ++
Sbjct: 327 ILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLK 381
>At3g06480 [A] KOG0331 ATP-dependent RNA helicase
Length = 1088
Score = 69.3 bits (168), Expect = 4e-11
Identities = 75/356 (21%), Positives = 153/356 (42%), Gaps = 26/356 (7%)
Query: 592 GLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIV------KSGRTSGTTIVV 645
G S P Q + LQ +D + TG GK+L Y +PA + R T +++
Sbjct: 454 GFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFILLRHCRNDSRNGPTVLIL 513
Query: 646 SP---LISLMQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKA 702
+P L + +QD+ + + S G A + L ++V +P +
Sbjct: 514 APTRELATQIQDEALRF-GRSSRISCTCLYGGAPKGPQLKELERGA--DIVVATPGRLND 570
Query: 703 SVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTAT 762
++ K + + +++ +V+DEA + + G F P +++ + P + TAT
Sbjct: 571 ILEMK-----MIDFQQVSLLVLDEADRMLDMG--FEPQIRKI--VNEIPPRRQTLMYTAT 621
Query: 763 ASEQVRM---DIIHN-LQLNNPVFLKQSFNRTNLFYQVLKKEKNSIFQMCDMIRTKFKNQ 818
++VR D++ N +Q+N + + N+ Y + + ++ ++R++ +
Sbjct: 622 WPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQERGS 681
Query: 819 TGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFG 878
II+C +K C+ + + ++ H ER V +++ + V+ AT
Sbjct: 682 KVIIFCSTKRLCDHLARSVGRH-FGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAA 740
Query: 879 MGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQ 934
G+D D+R V ++ P +E Y GR GR G +++ +D + +I+
Sbjct: 741 RGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAPDLIK 796
>Hs22057246 [A] KOG0336 ATP-dependent RNA helicase
Length = 631
Score = 67.8 bits (164), Expect = 1e-10
Identities = 81/390 (20%), Positives = 161/390 (40%), Gaps = 42/390 (10%)
Query: 598 PNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIV--------KSGRTSGTTIVVSPLI 649
P Q +A LQG D V+ TG GK+L Y +P + + R +V++P
Sbjct: 247 PIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFIHLDSQPISREQRNGPGMLVLTPTR 306
Query: 650 SLMQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKAS------ 703
L L + + S +S KG + + NG +E + ++I A+
Sbjct: 307 ELA-------LHVEAECSKYSYKGL-KSICIYGGRNRNGQIEDISKGVDIIIATPGRLND 358
Query: 704 VQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATA 763
+Q +++ + +V+DEA + + +F P +++ + PD + +AT
Sbjct: 359 LQMNNSVNLR----SITYLVIDEADKMLDM--EFEPQIRKILLDVR--PDRQTVMTSATW 410
Query: 764 SEQVRMDIIHNLQ------LNNPVFLKQSFNRTNLFYQVLKKEKNSIFQMCDMIRTKFKN 817
+ VR + L+ + N + + + N+ +KEK ++ Q + + N
Sbjct: 411 PDTVRQLALSYLKDPMIVYVGNLNLVAVNTVKQNIIVTT-EKEKRALTQ--EFVENMSPN 467
Query: 818 QTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAF 877
I++ K+ + S+ G+ H + ++ + +D+++ ++++ T
Sbjct: 468 DKVIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDQERAVEDFKSGNIKILITTDIV 527
Query: 878 GMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQKDK 937
G+D DV V+++ PR ++ Y G GR G + + RD + +I K
Sbjct: 528 SRGLDLNDVTHVYNYDFPRNIDVYVHRVGYIGRTGKTGTSVTLITQRDSKMAGELI---K 584
Query: 938 NLDMINKEKHLDKLQQVMQYCDNRTDCRRQ 967
LD N+ D + QY N+ R+
Sbjct: 585 ILDRANQSVPEDLVVMAEQYKLNQQKRHRE 614
>YBR237w [A] KOG0334 RNA helicase
Length = 849
Score = 67.0 bits (162), Expect = 2e-10
Identities = 87/456 (19%), Positives = 183/456 (40%), Gaps = 51/456 (11%)
Query: 494 TQFDEIKELDDDLKIISEAKLDAEDVPLSFAIKKE---PKSLDTQLQTELVPVPEVIEDD 550
T +++++ D+ I AKL A+ E P + +++E V +E +
Sbjct: 175 TDDEDVEDNTDNSNIAKIAKLKAKKRVKQIYYSPEELEPFQKNFYIESETVSSMSEMEVE 234
Query: 551 DFSMADLEPYMEETEKCTRENSVQPQYAWTSEMYHKLRHVFGLDSFRPNQLEAVNATLQG 610
+ ++ L+ + C + + Q +++ + S P Q +A+ A + G
Sbjct: 235 ELRLS-LDNIKIKGTGCPKPVTKWSQLGLSTDTMVLITEKLHFGSLTPIQSQALPAIMSG 293
Query: 611 KDAFVLMPTGGGKSLCYQLPAI--VKSGR------TSGTTIVVSPLISL---MQDQVEHL 659
+D + TG GK++ Y LP + VK+ R T ++++P L + ++V
Sbjct: 294 RDVIGISKTGSGKTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKF 353
Query: 660 LAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCKKAISKLYEHGKL 719
D G +E ++ +L E+V +P + KL ++
Sbjct: 354 TEADTSIRSVCCTGGSEMKKQITDLKRG--TEIVVATPGRFIDILTLNDG--KLLSTKRI 409
Query: 720 ARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVR---MDIIHN-- 774
+V+DEA + + G F P ++ K PD + +AT ++R + ++H+
Sbjct: 410 TFVVMDEADRLFDLG--FEPQITQI--MKTVRPDKQCVLFSATFPNKLRSFAVRVLHSPI 465
Query: 775 -LQLNNPVFLKQSFNRTNLFYQVLKKEKNSIFQMCDMI--RTKFKNQT------------ 819
+ +N+ + ++ + +++ E + +I R++F ++
Sbjct: 466 SITINSKGMVNENVKQK---FRICHSEDEKFDNLVQLIHERSEFFDEVQSENDGQSSDVE 522
Query: 820 -----GIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICAT 874
II+ S+N C+ S + G+ HAG ER + ++ ++ ++ T
Sbjct: 523 EVDAKAIIFVSSQNICDFISKKLLNAGIVTCAIHAGKPYQERLMNLEKFKREKNSILLCT 582
Query: 875 VAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGR 910
G++ P+V V + +T Y TGR R
Sbjct: 583 EVLSRGLNVPEVSLVIIYNAVKTFAQYVHTTGRTAR 618
>7295314 [A] KOG0331 ATP-dependent RNA helicase
Length = 811
Score = 67.0 bits (162), Expect = 2e-10
Identities = 77/341 (22%), Positives = 141/341 (40%), Gaps = 25/341 (7%)
Query: 608 LQGKDAFVLMPTGGGKSLCYQLPAIV------KSGRTSGT-TIVVSPLISLMQD--QVEH 658
+ G+D + TG GK+L Y LPA+V + R G +V++P L Q QV
Sbjct: 185 MSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAI 244
Query: 659 LLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCKKAISKLYEHGK 718
+ G A + + +L +E+V +P + ++ K +
Sbjct: 245 EFGSNTHVRNTCIFGGAPKGQQARDLERG--VEIVIATPGRLIDFLERGTTSLK-----R 297
Query: 719 LARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVRM---DIIHNL 775
+V+DEA + + G F P +++ +Q PD ++ +AT ++VR + ++N
Sbjct: 298 CTYLVLDEADRMLDMG--FEPQIRKI--MQQIRPDRQVLMWSATWPKEVRQLAEEFLNNY 353
Query: 776 QLNNPVFLKQSFNRTNLFYQVLKKEKNSIFQMCDMIRT-KFKNQTG-IIYCHSKNSCEQT 833
N L S N L + E + ++ ++ +N+T II+ +K ++
Sbjct: 354 IQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDISAENETKTIIFVETKKRVDEI 413
Query: 834 SALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFT 893
+ + + G + H ER V ++ R ++ AT G+D DV+FV ++
Sbjct: 414 TRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYD 473
Query: 894 VPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQ 934
P E Y GR GR N ++ + +IQ
Sbjct: 474 YPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQ 514
>Hs20149629 [A] KOG0330 ATP-dependent RNA helicase
Length = 455
Score = 65.9 bits (159), Expect = 4e-10
Identities = 79/345 (22%), Positives = 139/345 (39%), Gaps = 33/345 (9%)
Query: 600 QLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTSGT--TIVVSPLISLMQDQVE 657
Q+EA+ LQG+D L TG GK+ + LP + T +V++P L E
Sbjct: 51 QIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISE 110
Query: 658 HLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCKKAISKLYEHG 717
A + S+ M+ +L + ++ +P + ++ K +
Sbjct: 111 QFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKG----FNLR 166
Query: 718 KLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVRMDIIHNLQL 777
L +V+DEA + N DF + ++ K D +AT +++V+ + L
Sbjct: 167 ALKYLVMDEADRILNM--DFETEVDKI--LKVIPRDRKTFLFSATMTKKVQK--LQRAAL 220
Query: 778 NNPVFLKQSFNRTNLFYQVLKKEKNSIFQMCDMIRTKFKN------------QTGIIYCH 825
NPV S YQ ++K + Q I +KFK+ + +I+C
Sbjct: 221 KNPVKCAVSSK-----YQTVEK----LQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCS 271
Query: 826 SKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPD 885
+ N+ ++T+ L++ G H M +R ++A ++ AT G+D P
Sbjct: 272 TCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPH 331
Query: 886 VRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQ 930
V V +F +P + Y GR R G + I + + DV Q
Sbjct: 332 VDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQ 376
>ECU08g1080 [A] KOG0331 ATP-dependent RNA helicase
Length = 495
Score = 65.9 bits (159), Expect = 4e-10
Identities = 77/338 (22%), Positives = 147/338 (42%), Gaps = 45/338 (13%)
Query: 608 LQGKDAFVLMPTGGGKSLCYQLPAIVKSG------RTSGTTIVVSPLISLMQDQVEHLLA 661
L G+D + TG GK+L + LPA+V + R G ++V + Q++ ++
Sbjct: 122 LSGRDMVGIAQTGSGKTLSFILPALVHAKDQQPLRRGDGPIVLVLAPTRELVMQIKKVV- 180
Query: 662 KDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCKKAISKLYE--HGKL 719
D MF+ + TA + + L E E++ A+ + L++ H L
Sbjct: 181 -DEFCGMFNLRSTAVYGGASSQPQIRALHE----GAEVVIAT---PGRLIDLHDQGHAPL 232
Query: 720 ARI---VVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVR-------- 768
+R+ V+DEA + + G F P +++ + + + +AT +VR
Sbjct: 233 SRVTFLVLDEADRMLDMG--FEPQLRKI--IPKTNANRQTLMWSATWPREVRGLAESYMN 288
Query: 769 ---MDIIHNLQLNNPVFLKQSFNRTNLFYQVLKKEKNSIFQMCDMIRTKFKNQTGIIYCH 825
++ N +L +KQ + +++++ + + D FK I++C+
Sbjct: 289 EYIQVVVGNEELKTNSKIKQIVEVCSG-----REKEDKLIGVLD----NFKGDKVIVFCN 339
Query: 826 SKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPD 885
K +C+ ++ ++G A H + R +V D+++ R ++ AT G G+D D
Sbjct: 340 MKRTCDDLEYVLNRSGYGAAALHGDKSQNIRDKVLDDFRSGRRPILIATEVAGRGLDVND 399
Query: 886 VRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSF 923
V+ V +F P + E Y GR R GN + I + F
Sbjct: 400 VKLVINFDFPGSCEDYVHRIGRTAR-GNTKEGISHTFF 436
>CE18785 [A] KOG0331 ATP-dependent RNA helicase
Length = 561
Score = 65.9 bits (159), Expect = 4e-10
Identities = 75/357 (21%), Positives = 154/357 (43%), Gaps = 33/357 (9%)
Query: 597 RPNQLEAVN--ATLQGKDAFVLMPTGGGKSLCYQLPAIV----KSGRTSG---TTIVVSP 647
+P +++++ + G+D + TG GK+L + LPA+V ++ R G +V+ P
Sbjct: 151 KPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLP 210
Query: 648 LISLMQD--QVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQ 705
L Q +V + M G A + +L +++V +P + +
Sbjct: 211 TRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERG--VDIVVATPGRLLDFLD 268
Query: 706 CKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASE 765
K K + +V+DEA + + G F P K++ Q PD + +AT +
Sbjct: 269 NGTTNMK-----KCSYLVLDEADRMLDMG--FEPQIKKI--IGQIRPDRQTLMFSATWPK 319
Query: 766 QVRM---DIIHNLQLNNPVFLKQSFNRT-----NLFYQVLKKEKNSIFQMCDMIRTKFKN 817
+VR D + N L+ + N ++ + K+ K + ++ + I + +
Sbjct: 320 EVRALASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQAK--LMELLNHIMNQKEC 377
Query: 818 QTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAF 877
+T II+ +K ++ + M+++G H + ER V Q+++A + ++ AT
Sbjct: 378 KT-IIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKAGKTPIMLATDVA 436
Query: 878 GMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQ 934
G+D D++FV ++ P E Y GR GR +++ + + +++
Sbjct: 437 ARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDLLK 493
>7297048 [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 389
Score = 65.9 bits (159), Expect = 4e-10
Identities = 77/360 (21%), Positives = 155/360 (42%), Gaps = 27/360 (7%)
Query: 587 LRHVFGLDSFRPNQLE--AVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTS---GT 641
LR ++G +P+ ++ A+ ++G+D +G GK+ + + AI++ TS
Sbjct: 28 LRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTATFSI-AILQQIDTSIRECQ 86
Query: 642 TIVVSPLISLMQD--QVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEM 699
++++P L +V L + +K + G R + +V +P
Sbjct: 87 ALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVREDA--RILESGCHVVVGTPGR 144
Query: 700 IKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIAL 759
+ + +K + Y + V+DEA + + G F+ +++ FK PD+ +I L
Sbjct: 145 VYDMIN-RKVLRTQY----IKLFVLDEADEMLSRG--FKDQIQDV--FKMLPPDVQVILL 195
Query: 760 TATASEQVRMDIIHNLQLNNPVFLKQSFNRTNL-----FYQVLKKEKNSIFQMCDMIRTK 814
+AT V + + +PV + L FY +K+E + +CD+ T
Sbjct: 196 SATMPPDVLE--VSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLGTLCDLYDTL 253
Query: 815 FKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICAT 874
Q+ +I+C+++ +Q + M + + H M+ +R + + +++ +V+ T
Sbjct: 254 SITQS-VIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITT 312
Query: 875 VAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQ 934
GID V V ++ +P E Y GR GR G I + + D R ++ + Q
Sbjct: 313 DLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQ 372
>SPAC1F5.10 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 involved in
rRNA maturation DEAD-box superfamily
Length = 394
Score = 65.5 bits (158), Expect = 6e-10
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 16/220 (7%)
Query: 722 IVVDEAHCVSNWGHDFRPDYKELSFFKQEY--PDIPMIALTATASEQVRMDIIHNLQLNN 779
+++DEA + N G +KE + Y P ++ ++AT + V + N N
Sbjct: 167 LILDEADELLNQG------FKEQIYDIYRYLPPGTQVVVVSATLPQDVLE--MTNKFTTN 218
Query: 780 PVFLKQSFNRTNL-----FYQVLKKEKNSIFQMCDMIRTKFKNQTGIIYCHSKNSCEQTS 834
PV + + L ++ ++KE+ +CD+ T Q +I+C+S+ + +
Sbjct: 219 PVRILVKRDELTLEGLKQYFIAVEKEEWKFDTLCDLYDTLTITQA-VIFCNSRRKVDWLT 277
Query: 835 ALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTV 894
M++ H M ER + QD++ +V+ T + GID V V ++ +
Sbjct: 278 EKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSRVLICTDIWARGIDVQQVSLVINYDL 337
Query: 895 PRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQ 934
P E Y GR+GR G I + + DVR ++ + Q
Sbjct: 338 PANRENYIHRIGRSGRFGRKGVAINFVTNEDVRILRDIEQ 377
>7296990 [A] KOG0329 ATP-dependent RNA helicase
Length = 424
Score = 64.7 bits (156), Expect = 1e-09
Identities = 84/364 (23%), Positives = 152/364 (41%), Gaps = 35/364 (9%)
Query: 600 QLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTSGTTIVVSPLISLMQDQVEHL 659
Q E + + G D +G GK+ + L + + + T V L+ ++
Sbjct: 68 QHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHV--LVMCHTRELAFQ 125
Query: 660 LAKD----------IKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCKKA 709
++K+ +K ++F ++ T +G +V +P I A ++ KK
Sbjct: 126 ISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLK---SGTPHIVVGTPGRILALIRNKKL 182
Query: 710 ISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVRM 769
KL +H V+DE + D R D +E+ F+ ++ +AT S+ +R
Sbjct: 183 NLKLLKH-----FVLDECDKMLEQ-LDMRRDVQEI--FRSTPHGKQVMMFSATLSKDIRP 234
Query: 770 DIIHNLQLNNPVFL----KQSFNRTNLFYQVLKK-EKNS-IFQMCDMIRTKFKNQTGIIY 823
+Q V++ K + + Y LK+ EKN +F++ D++ NQ +I+
Sbjct: 235 VCKKFMQDPMEVYVDDEAKLTLHGLQQHYVNLKENEKNKKLFELLDVLEF---NQV-VIF 290
Query: 824 CHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDK 883
S C S L+ + H GM +ER Q ++ + +++ AT FG G+D
Sbjct: 291 VKSVQRCVALSQLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDI 350
Query: 884 PDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQK--DKNLDM 941
V VF++ +P + Y RAGR G I + S + I +Q D N+
Sbjct: 351 ERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNEVQDRFDVNISE 410
Query: 942 INKE 945
+ +E
Sbjct: 411 LPEE 414
>SPBC776.09 [A] KOG0326 ATP-dependent RNA helicase
Length = 485
Score = 64.3 bits (155), Expect = 1e-09
Identities = 79/376 (21%), Positives = 151/376 (40%), Gaps = 22/376 (5%)
Query: 556 DLEPYMEETEKCTRENSVQPQYAWTSEMYHKLRHVF--GLDSFRPNQLEAVNATLQGKDA 613
D+ P E+ K TR + Y L +F G + P Q E++ L G+D
Sbjct: 30 DMRPKTEDVTK-TRGTEFEDYYL----KRELLMGIFEAGFERPSPIQEESIPIALSGRDI 84
Query: 614 FVLMPTGGGKSLCYQLPAIVK--SGRTSGTTIVVSPL--ISLMQDQVEHLLAKDIKASMF 669
G GK+ + +P++ K + ++ T+++ P ++L QV L K + +
Sbjct: 85 LARAKNGTGKTAAFVIPSLEKVDTKKSKIQTLILVPTRELALQTSQVCKTLGKHMNVKVM 144
Query: 670 SSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCKKAISKLYEHGKLARIVVDEAHC 729
+ G R L N + +V +P + A + + + V+DEA
Sbjct: 145 VTTGGTTLRDDIIRL--NDTVHIVVGTPGRV-----LDLAGKGVADFSECTTFVMDEADK 197
Query: 730 VSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVRMDIIHNLQLNNPVFLKQSFNR 789
+ + +F P ++L + + I + + T + MD N + + +
Sbjct: 198 LLS--PEFTPIIEQLLSYFPKNRQISLYSATFPLIVKNFMDKHLNKPYEINLMDELTLRG 255
Query: 790 TNLFYQVLKKEKNSIFQMCDMIRTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHA 849
+Y + + + + + +K + II+C+S N E + + + G C + HA
Sbjct: 256 VTQYYAFVDESQK--VHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHA 313
Query: 850 GMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAG 909
M R +V +++ + + + GID V V +F P+ E Y GR+G
Sbjct: 314 KMLQSHRNRVFHNFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSG 373
Query: 910 RDGNFSQCIMYYSFRD 925
R G+ I + S+ D
Sbjct: 374 RFGHRGLAISFISWAD 389
>Hs13129006 [A] KOG0331 ATP-dependent RNA helicase
Length = 737
Score = 64.3 bits (155), Expect = 1e-09
Identities = 80/380 (21%), Positives = 153/380 (40%), Gaps = 43/380 (11%)
Query: 581 SEMYHKLRHVFGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTSG 640
SE KL G+ P Q++ +GKD TG GK+ + +P I + R
Sbjct: 145 SEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQE 204
Query: 641 T--------TIVVSPLISLMQDQVEHL--LAKDIKASMFSSKGTAEQRRMTFNLFMNGLL 690
T +V++P L + + + + + F GT+ Q ++ N NG+
Sbjct: 205 TIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSVACFYG-GTSYQSQI--NHIRNGI- 260
Query: 691 ELVYISPEMIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQE 750
+++ +P IK +Q S + KL +V+DE + + G + + +K +
Sbjct: 261 DILVGTPGRIKDHLQ-----SGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKTD 315
Query: 751 YPDIPMIALTATASEQVRMDIIHNLQLNNPVFLKQSFNRTNLFYQVLKKEKNSIFQMC-- 808
D P L + Q + ++K + + +L ++ +K ++ +
Sbjct: 316 SEDNPQTLLFSATCPQWVYKVAKK-------YMKSRYEQVDLVGKMTQKAATTVEHLAIQ 368
Query: 809 -----------DMIRTKFKNQ-TGIIYCHSK-NSCEQTSALMQKNGVKCAFYHAGMDPDE 855
D+++ ++ II+C +K N E K +C H + +
Sbjct: 369 CHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCL--HGDIAQSQ 426
Query: 856 RFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFS 915
R + ++ +V+ AT G+D P+V V + P+ +E Y +GR GR G
Sbjct: 427 REITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTG 486
Query: 916 QCIMYYSFRDVRTIQTMIQK 935
CI +Y R+ ++ + QK
Sbjct: 487 ICICFYQPRERGQLRYVEQK 506
>CE01338 [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 363
Score = 63.9 bits (154), Expect = 2e-09
Identities = 72/359 (20%), Positives = 162/359 (45%), Gaps = 42/359 (11%)
Query: 587 LRHVFGLDSFRPNQLE--AVNATLQGKDAFVLMPTGGGKSLCYQLPAI--VKSGRTSGTT 642
LR ++G +P+ ++ AV GKD + G GK++ + + +
Sbjct: 8 LRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQV 67
Query: 643 IVVSPLISLMQDQVEHLLA----KDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPE 698
I+++P + Q E L + ++ A+ TAE +++ ++ +P+
Sbjct: 68 ILLAPQRGMAQRAHEQLKSLGRNLNVNATCLGFDTTAENDKIS---------HVLMGTPK 118
Query: 699 MIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIA 758
+++ + K++ V+DEA + + G F+ E+ F+ D+ ++
Sbjct: 119 DFLSNIPSDTSRIKMF--------VLDEADEMLSKG--FKDQIYEV--FRSMPQDVQVVL 166
Query: 759 LTATASEQVRMDIIHNLQLNNPVFLKQSFNRTNL-----FYQVLKKEKNSIFQMCDMIRT 813
L+AT +V +D+ N + +P+ + + L FY ++K++ +CD+++T
Sbjct: 167 LSATMPSEV-LDVT-NRFMRDPIRILVKKDELTLEGIRQFYINVQKDEWKFNCLCDLLKT 224
Query: 814 KFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICA 873
+ Q +I+C+++ Q + + +K + +H M+ +ER + +D+ + +V+
Sbjct: 225 SRETQ-ALIFCNTRRRVTQLTEQLMSIPIKVSCFHGNMEHNEREDMVKDFNSRNTRVLVT 283
Query: 874 T--VAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQ 930
T +A GM I K + ++ V +E Y GR G G+ I +++ D+ ++
Sbjct: 284 TDLMARGMNIRK---SLIINYDVSGNMENYMLRNGRQGNFGSKGLPISFFTENDISDLK 339
>At1g55150 [A] KOG0331 ATP-dependent RNA helicase
Length = 501
Score = 63.9 bits (154), Expect = 2e-09
Identities = 69/343 (20%), Positives = 139/343 (40%), Gaps = 25/343 (7%)
Query: 598 PNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTSGTTIVVSPLISLMQDQVE 657
P Q + ++G+D + TG GK+L Y LPAIV P++ ++ E
Sbjct: 124 PIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVLVLAPTRE 183
Query: 658 HLLAKDIKASMFSSKGTAEQRRMTFNL--------FMNGLLELVYISPEMIKASVQCKKA 709
+ +AS F S + + + G+ E+V +P + ++
Sbjct: 184 LAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGV-EIVIATPGRLIDMMESNNT 242
Query: 710 ISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVRM 769
+ ++ +V+DEA + + G D P +++ PD + +AT ++V
Sbjct: 243 NLR-----RVTYLVLDEADRMLDMGFD--PQIRKI--VSHIRPDRQTLYWSATWPKEVEQ 293
Query: 770 DIIHNLQLNNP--VFLKQSFNRTNLFYQVLK---KEKNSIFQMCDMIRTKFKNQTGIIYC 824
+ L NP V + S + N + + E ++ ++ +++
Sbjct: 294 --LSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFL 351
Query: 825 HSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKP 884
+K C+Q + ++ +G H ER V ++++ + ++ AT G+D
Sbjct: 352 DTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVK 411
Query: 885 DVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVR 927
DV++V ++ P +LE Y GR GR G +++ + R
Sbjct: 412 DVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANAR 454
>7295505 [A] KOG0346 RNA helicase
Length = 560
Score = 63.9 bits (154), Expect = 2e-09
Identities = 77/376 (20%), Positives = 149/376 (39%), Gaps = 50/376 (13%)
Query: 600 QLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVK-------SGRTSGTTIVVSPLISLM 652
Q A+ L+GKD V TG GK+ Y LP I K + + +V++P L
Sbjct: 36 QSTAIPLLLEGKDVVVRARTGSGKTATYALPLIQKILNSKLNASEQYVSAVVLAPTKKLC 95
Query: 653 QDQ---VEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCKKA 709
+ +E L+ K + + +T ++ ++V +P + A +
Sbjct: 96 RQSRKVIEQLVESCGKVVRVADIADSSNDTVTQRHALSESPDIVVATPANLLAYAEAGSV 155
Query: 710 ISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVRM 769
+ + + +VVDEA V +G++ D+K L K P + ++AT ++ V
Sbjct: 156 VDLKH----VETLVVDEADLVFAYGYE--KDFKRL--IKHLPPIYQAVLVSATLTDDVVR 207
Query: 770 DIIHNLQLNNPVFLK----QSFNRTNLFYQ-VLKKEKNSIFQMCDMIRTKFKNQTGIIYC 824
+ L LNNPV LK + + L +Q +L +E + + +++ + II+
Sbjct: 208 --MKGLCLNNPVTLKLEEPELVPQDQLSHQRILAEENDKPAILYALLKLRLIRGKSIIFV 265
Query: 825 HSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGM----- 879
+S + C + +++ G++ ++ + + R + +I A+ M
Sbjct: 266 NSIDRCYKVRLFLEQFGIRACVLNSELPANIRIHTISQFNKGTYDIIIASDEHHMEKPGG 325
Query: 880 --------------------GIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIM 919
GID V V +F PR + Y GR R N +
Sbjct: 326 KSATNRKSPRSGDMESSASRGIDFQCVNNVINFDFPRDVTSYIHRAGRTARGNNKGSVLS 385
Query: 920 YYSFRDVRTIQTMIQK 935
+ S ++ + ++ +K
Sbjct: 386 FVSMKESKVNDSVEKK 401
>7290853 [A] KOG0331 ATP-dependent RNA helicase
Length = 945
Score = 63.5 bits (153), Expect = 2e-09
Identities = 70/327 (21%), Positives = 142/327 (43%), Gaps = 38/327 (11%)
Query: 608 LQGKDAFVLMPTGGGKSLCYQLPAIVKSG------RTSGT-TIVVSPLISLMQD------ 654
L G+D + TG GK+L Y LPAIV G R G +V++P L Q
Sbjct: 272 LSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQPPIIRGEGPIALVLAPTRELAQQIQSVVR 331
Query: 655 QVEHLLAKDIKAS-MFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCKKAISKL 713
HL +I+ + +F Q R ++ +E++ +P + ++ + +
Sbjct: 332 DYGHLCKPEIRHTCIFGGSSKVPQARD-----LDRGVEVIIATPGRLIDFLENRNTNLQ- 385
Query: 714 YEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVRM---D 770
+ +V+DEA + + G F P +++ +Q PD ++ +AT ++V+ D
Sbjct: 386 ----RCTYLVLDEADRMLDMG--FEPQIRKI--IEQIRPDRQVVMWSATWPKEVQALAGD 437
Query: 771 IIHN-LQLNNPVFLKQSFNRTNLFYQV---LKKEKNSIFQMCDMIRTKFKNQTG---IIY 823
+++ +Q+N + + ++ ++K + + + ++ K G I++
Sbjct: 438 FLNDYIQINIGSMNLSANHNIRQIVEICTEIEKPQRLVCLLNEISPIKNSGNNGNKIIVF 497
Query: 824 CHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDK 883
+K E +++ G H +ER V +D++ + ++ AT G+D
Sbjct: 498 VETKIKVEDILQIIRAEGYNATSIHGDKTQNERDSVLKDFRNGKSNILIATDVASRGLDV 557
Query: 884 PDVRFVFHFTVPRTLEGYYQETGRAGR 910
D+++V ++ P + E Y GR GR
Sbjct: 558 EDLQYVINYDYPNSSENYVHRIGRTGR 584
>7299019 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 involved in
rRNA maturation DEAD-box superfamily
Length = 399
Score = 63.2 bits (152), Expect = 3e-09
Identities = 55/244 (22%), Positives = 110/244 (44%), Gaps = 25/244 (10%)
Query: 698 EMIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEY--PDIP 755
+MIK V +AI L V+DEA + N G +KE + Y P
Sbjct: 157 DMIKRRVLRTRAIKML---------VLDEADEMLNKG------FKEQIYDVYRYLPPATQ 201
Query: 756 MIALTATASEQVRMDIIHNLQLNNPVFLKQSFNRTNL-----FYQVLKKEKNSIFQMCDM 810
++ ++AT ++ +++ + +P+ + + L F+ +++E+ +CD+
Sbjct: 202 VVLISATLPHEI-LEMTSKF-MTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDL 259
Query: 811 IRTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQV 870
T Q +I+C++K + + M++ + H M ER ++ ++++A + +V
Sbjct: 260 YDTLTITQA-VIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRAGQSRV 318
Query: 871 ICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQ 930
+ T + GID V V ++ +P E Y GR+GR G I + D+R ++
Sbjct: 319 LITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILR 378
Query: 931 TMIQ 934
+ Q
Sbjct: 379 DIEQ 382
>Hs7661920 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 involved in
rRNA maturation DEAD-box superfamily
Length = 411
Score = 62.8 bits (151), Expect = 4e-09
Identities = 47/220 (21%), Positives = 101/220 (45%), Gaps = 16/220 (7%)
Query: 722 IVVDEAHCVSNWGHDFRPDYKELSFFKQEY--PDIPMIALTATASEQVRMDIIHNLQLNN 779
+V+DEA + N G +KE + Y P ++ ++AT ++ + N + +
Sbjct: 184 LVLDEADEMLNKG------FKEQIYDVYRYLPPATQVVLISATLPHEILE--MTNKFMTD 235
Query: 780 PVFLKQSFNRTNL-----FYQVLKKEKNSIFQMCDMIRTKFKNQTGIIYCHSKNSCEQTS 834
P+ + + L F+ +++E+ +CD+ T Q +I+C++K + +
Sbjct: 236 PIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQA-VIFCNTKRKVDWLT 294
Query: 835 ALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTV 894
M++ + H M ER + +++++ +V+ +T + G+D P V + ++ +
Sbjct: 295 EKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDL 354
Query: 895 PRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQ 934
P E Y GR+GR G I + D+R ++ + Q
Sbjct: 355 PNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQ 394
>At1g16280 [A] KOG0340 ATP-dependent RNA helicase
Length = 491
Score = 62.8 bits (151), Expect = 4e-09
Identities = 71/371 (19%), Positives = 152/371 (40%), Gaps = 19/371 (5%)
Query: 592 GLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRT--SGTTIVVSPLI 649
G+ P Q V L G+D L TG GK+ + LP + + +VV+P
Sbjct: 77 GMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHRLAEDPYGVFALVVTPTR 136
Query: 650 SLMQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCKKA 709
L E A ++ S +T + + +V +P IK ++
Sbjct: 137 ELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPGRIKVLLENNPD 196
Query: 710 ISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVRM 769
+ ++ K +V+DEA V + G F+ + + + + + + T T++ Q +
Sbjct: 197 VPPVFSRTKF--LVLDEADRVLDVG--FQDELRTIFQCLPKSRQTLLFSATMTSNLQALL 252
Query: 770 DIIHNLQLNNPVFLKQSFNRTN----LFYQVLKKEKNSIFQMCDMIRTKFKNQ---TGII 822
+ +N + +++ L Q + ++K++ I ++ +++ + +I
Sbjct: 253 E-----HSSNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHILSQMEDKGIRSAMI 307
Query: 823 YCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGID 882
+ + +C++ S ++ + V+ H+ R +++ +V ++ AT G+D
Sbjct: 308 FVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLD 367
Query: 883 KPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQK-DKNLDM 941
P V V ++ +PR Y GR R G + + DV+ I + ++ K ++
Sbjct: 368 IPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKLIHKIEEEVGKKMEP 427
Query: 942 INKEKHLDKLQ 952
NK+ D L+
Sbjct: 428 YNKKVITDSLE 438
>CE26887 [A] KOG0333 U5 snRNP-like RNA helicase subunit
Length = 730
Score = 62.4 bits (150), Expect = 5e-09
Identities = 81/380 (21%), Positives = 150/380 (39%), Gaps = 55/380 (14%)
Query: 582 EMYHKLRHVFGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIV-------- 633
E+Y ++ + L+ P Q +A+ LQ +D + TG GK+ + LP +V
Sbjct: 311 EVYQAVKEIGYLEP-TPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKM 369
Query: 634 --KSGRTSGT-TIVVSPLISLMQ--DQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNG 688
+ R G I+++P L Q ++ + K + S G A + L M
Sbjct: 370 ERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASREDQGMKLRMG- 428
Query: 689 LLELVYISPEMIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFK 748
+E+V +P + ++ + + + +++DEA + + G F PD +++ +
Sbjct: 429 -VEVVIATPGRLLDVLENRYLLLN-----QCTYVILDEADRMLDMG--FEPDVQKVLEYM 480
Query: 749 QEYPDIPM--------------------------IALTATASEQVRMDIIHNLQLNNPVF 782
PD M + TAT S + L+ V
Sbjct: 481 ---PDTNMKKDTDEFDNEEALMKGFSTREKYRQTVMFTATMSSAIERLARQYLRRPAVVH 537
Query: 783 LKQSFNRTNLFYQV--LKKEKNSIFQMCDMIRTKFKNQTGIIYCHSKNSCEQTSALMQKN 840
+ + T QV + E ++ +++ ++F+ II+ + K + S + K
Sbjct: 538 IGSAGKPTERVEQVVYMVPEDRKRKKLVEVLESQFQPPI-IIFVNQKKGADMLSKGLTKL 596
Query: 841 GVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEG 900
G K H G D+R Q + ++ AT G GID DV V ++ + +++E
Sbjct: 597 GFKPTVLHGGKGQDQREYALQALKEGTSDILVATDVAGRGIDVKDVSLVLNYDMAKSIED 656
Query: 901 YYQETGRAGRDGNFSQCIMY 920
Y GR GR G + I +
Sbjct: 657 YTHRIGRTGRAGKHGKAITF 676
>CE24878 [A] KOG0333 U5 snRNP-like RNA helicase subunit
Length = 769
Score = 62.4 bits (150), Expect = 5e-09
Identities = 81/380 (21%), Positives = 150/380 (39%), Gaps = 55/380 (14%)
Query: 582 EMYHKLRHVFGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIV-------- 633
E+Y ++ + L+ P Q +A+ LQ +D + TG GK+ + LP +V
Sbjct: 311 EVYQAVKEIGYLEP-TPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKM 369
Query: 634 --KSGRTSGT-TIVVSPLISLMQ--DQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNG 688
+ R G I+++P L Q ++ + K + S G A + L M
Sbjct: 370 ERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASREDQGMKLRMG- 428
Query: 689 LLELVYISPEMIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFK 748
+E+V +P + ++ + + + +++DEA + + G F PD +++ +
Sbjct: 429 -VEVVIATPGRLLDVLENRYLLLN-----QCTYVILDEADRMLDMG--FEPDVQKVLEYM 480
Query: 749 QEYPDIPM--------------------------IALTATASEQVRMDIIHNLQLNNPVF 782
PD M + TAT S + L+ V
Sbjct: 481 ---PDTNMKKDTDEFDNEEALMKGFSTREKYRQTVMFTATMSSAIERLARQYLRRPAVVH 537
Query: 783 LKQSFNRTNLFYQV--LKKEKNSIFQMCDMIRTKFKNQTGIIYCHSKNSCEQTSALMQKN 840
+ + T QV + E ++ +++ ++F+ II+ + K + S + K
Sbjct: 538 IGSAGKPTERVEQVVYMVPEDRKRKKLVEVLESQFQPPI-IIFVNQKKGADMLSKGLTKL 596
Query: 841 GVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEG 900
G K H G D+R Q + ++ AT G GID DV V ++ + +++E
Sbjct: 597 GFKPTVLHGGKGQDQREYALQALKEGTSDILVATDVAGRGIDVKDVSLVLNYDMAKSIED 656
Query: 901 YYQETGRAGRDGNFSQCIMY 920
Y GR GR G + I +
Sbjct: 657 YTHRIGRTGRAGKHGKAITF 676
>YGL078c [A] KOG0331 ATP-dependent RNA helicase
Length = 523
Score = 61.2 bits (147), Expect = 1e-08
Identities = 77/336 (22%), Positives = 137/336 (39%), Gaps = 39/336 (11%)
Query: 598 PNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAI---VKSGRTSGTTI-VVSPLISLMQ 653
P Q A L GKD + TG GK+ + +PAI + + G + V+SP L
Sbjct: 137 PIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQKKRGIQVLVISPTRELAS 196
Query: 654 DQVEHLLAKDIKASM-----FSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCKK 708
++L+ K M + EQR ++V +P + +Q
Sbjct: 197 QIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQLKKS------QVVVATPGRLLDLLQ--- 247
Query: 709 AISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVR 768
+ ++ +V+DEA + G F D K + + + + TAT ++VR
Sbjct: 248 --EGSVDLSQVNYLVLDEADRMLEKG--FEEDIKNI-IRETDASKRQTLMFTATWPKEVR 302
Query: 769 MDIIHNLQLNNPVFLKQSFNRTNLFY------QVLK------KEKNSIFQMCDMIRTKFK 816
+ + +NNP+ K S T+ Q+++ KE+ + + K
Sbjct: 303 E--LASTFMNNPI--KVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKYHSGPKK 358
Query: 817 NQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVA 876
N+ +I+ K + ++ NG A H + +R Q ++++ + ++ AT
Sbjct: 359 NEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDV 418
Query: 877 FGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDG 912
G+D P+V+ V + T P T+E Y GR GR G
Sbjct: 419 AARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAG 454
>CE22474 [A] KOG0336 ATP-dependent RNA helicase
Length = 504
Score = 61.2 bits (147), Expect = 1e-08
Identities = 77/372 (20%), Positives = 145/372 (38%), Gaps = 48/372 (12%)
Query: 592 GLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIV-------------KSGRT 638
G + P Q + L G+D + TG GK+L + LPA++ + +
Sbjct: 103 GFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKP 162
Query: 639 SGTTIVVSPLISLMQD---QVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYI 695
S +V+SP L Q +V+ K+ G+ ++ G +E+V
Sbjct: 163 SPFVLVLSPTRELAQQIEGEVKKYSYNGYKSVCLYGGGSRPEQVEA----CRGGVEIVIA 218
Query: 696 SPEMIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHD---------FRPDYKELSF 746
+P + + IS + +V+DEA + + G + RPD + ++
Sbjct: 219 TPGRL-TDLSNDGVISL----ASVTYVVLDEADRMLDMGFEVAIRRILFEIRPD-RLVAL 272
Query: 747 FKQEYPDIPMIALTATASEQVRMDIIHNLQLNNPVFLKQSFNRTNLFYQVLKKEKNSIFQ 806
+P+ + LT +++ M + +L L + + Q F + +
Sbjct: 273 TSATWPE-GVRKLTDKYTKEAVMAVNGSLDLTSCKSVTQFFE--------FVPHDSRFLR 323
Query: 807 MCDMIR----TKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQD 862
+C+++ +N II+ SK + S+ G+ H G +R
Sbjct: 324 VCEIVNFLTAAHGQNYKMIIFVKSKVMADHLSSDFCMKGINSQGLHGGRSQSDREMSLNM 383
Query: 863 WQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYS 922
++ VQ++ AT GID PD+ V ++ P +E Y GR GR G + + +
Sbjct: 384 LRSGEVQILVATDLASRGIDVPDITHVLNYDFPMDIEEYVHRVGRTGRAGRKGEAMSFLW 443
Query: 923 FRDVRTIQTMIQ 934
+ D + +IQ
Sbjct: 444 WNDRSNFEGLIQ 455
>At3g19760 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 involved in
rRNA maturation DEAD-box superfamily
Length = 408
Score = 61.2 bits (147), Expect = 1e-08
Identities = 74/362 (20%), Positives = 147/362 (40%), Gaps = 41/362 (11%)
Query: 591 FGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPA--IVKSGRTSGTTIVVSPL 648
+G + Q AV LQG+D +G GK+ L +V + +++SP
Sbjct: 53 YGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQVVDTSSREVQALILSPT 112
Query: 649 ISLMQDQVEHLLAKDIKASM-----FSSKGTAEQRRMTFNLFMNGLLELVYISP----EM 699
L + + A + A++ E R + + +V +P +M
Sbjct: 113 RELATQTEKTIQAIGLHANIQAHACIGGNSVGEDIRK-----LEHGVHVVSGTPGRVCDM 167
Query: 700 IKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEY--PDIPMI 757
IK +AI L ++DE+ + + G +K+ + Y PD+ +
Sbjct: 168 IKRRSLRTRAIKLL---------ILDESDEMLSRG------FKDQIYDVYRYLPPDLQVC 212
Query: 758 ALTATASEQVRMDIIHNLQLNNPVFLKQSFNRTNL-----FYQVLKKEKNSIFQMCDMIR 812
++AT ++ +++ + PV + + L F+ ++KE+ +CD+
Sbjct: 213 LVSATLPHEI-LEMTSKF-MTEPVKILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYD 270
Query: 813 TKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVIC 872
T Q +I+C++K + S M+ + + H M ER + ++++ +V+
Sbjct: 271 TLTITQA-VIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLI 329
Query: 873 ATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTM 932
T + GID V V ++ +P E Y GR+GR G I + D++ ++ +
Sbjct: 330 TTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDI 389
Query: 933 IQ 934
Q
Sbjct: 390 EQ 391
>7297629 [A] KOG0326 ATP-dependent RNA helicase
Length = 458
Score = 61.2 bits (147), Expect = 1e-08
Identities = 74/333 (22%), Positives = 137/333 (40%), Gaps = 17/333 (5%)
Query: 598 PNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTSG--TTIVVSPL--ISLMQ 653
P Q A+ L GKD G GK+ Y +P + + T +V+ P ++L
Sbjct: 82 PIQEAAIPIALSGKDVLARAKNGTGKTGAYCIPVLEQIDPTKDYIQALVMVPTRELALQT 141
Query: 654 DQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCKKAISKL 713
Q+ LAK + + + G + ++ ++L+ +P I + K A
Sbjct: 142 SQICIELAKHLDIRVMVTTGGTILKDDILRIYQK--VQLIIATPGRILDLMDKKVADMS- 198
Query: 714 YEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVRMDIIH 773
H ++ +V+DEA + + D+ L K D ++ +AT V+ +
Sbjct: 199 --HCRI--LVLDEADKLLSLDFQGMLDHVILKLPK----DPQILLFSATFPLTVKNFMEK 250
Query: 774 NLQLNNPVFLKQSFNRTNLF-YQVLKKEKNSIFQMCDMIRTKFKNQTGIIYCHSKNSCEQ 832
+L+ + L + + Y +E+ + + + + +K + II+C+S E
Sbjct: 251 HLREPYEINLMEELTLKGVTQYYAFVQERQKVHCL-NTLFSKLQINQSIIFCNSTQRVEL 309
Query: 833 TSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHF 892
+ + + G C + HA M R +V D++ + + + F GID V V +F
Sbjct: 310 LAKKITELGYCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSDLFTRGIDVQAVNVVINF 369
Query: 893 TVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRD 925
PR E Y GR+GR G+ I ++ D
Sbjct: 370 DFPRMAETYLHRIGRSGRFGHLGIAINLITYED 402
>YDR021w [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 involved in
rRNA maturation DEAD-box superfamily
Length = 399
Score = 60.5 bits (145), Expect = 2e-08
Identities = 70/355 (19%), Positives = 144/355 (39%), Gaps = 32/355 (9%)
Query: 591 FGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAI--VKSGRTSGTTIVVSPL 648
+G ++ Q A+ + GKD +G GK+ + + + + + +++SP
Sbjct: 41 YGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLLQAIDLRKKDLQALILSPT 100
Query: 649 ISLMQD--QVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQC 706
L QV L + + F+ G + + +G + V +P + ++
Sbjct: 101 RELASQIGQVVKNLGDYMNVNAFAITGGKTLKDDLKKMQKHG-CQAVSGTPGRVLDMIK- 158
Query: 707 KKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDI----PMIALTAT 762
++ + + +V+DEA + E FKQ+ DI P
Sbjct: 159 ----KQMLQTRNVQMLVLDEADEL----------LSETLGFKQQIYDIFAKLPKNCQVVV 204
Query: 763 ASEQVRMDIIHNLQ--LNNPVFLKQSFNRTNL-----FYQVLKKEKNSIFQMCDMIRTKF 815
S + DI+ + +N+PV + + +L + + KE+ +CD+ +
Sbjct: 205 VSATMNKDILEVTRKFMNDPVKILVKRDEISLEGIKQYVVNVDKEEWKFDTLCDIYDSLT 264
Query: 816 KNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATV 875
Q +I+C++K + S + ++ H M +ER +V D++ +V+ +T
Sbjct: 265 ITQC-VIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTD 323
Query: 876 AFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQ 930
+ GID V V ++ +P +E Y GR+GR G I + + D+ ++
Sbjct: 324 VWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKADLAKLR 378
>SPBC543.06c [A] KOG0340 ATP-dependent RNA helicase
Length = 453
Score = 60.5 bits (145), Expect = 2e-08
Identities = 77/394 (19%), Positives = 163/394 (40%), Gaps = 28/394 (7%)
Query: 608 LQGKDAFVLMPTGGGKSLCYQLPAIVK-SGRTSGT-TIVVSPL--ISLMQDQVEHLLAKD 663
L+G++ TG GK+ + LP I K S SG ++++P +++ D+ L +
Sbjct: 42 LEGRNCIGGAKTGSGKTAAFALPIIEKWSKDPSGIFALILTPTRELAIQIDEQFAALGAN 101
Query: 664 IKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQC--KKAISKLYEHGKLAR 721
+ G + R + +L +V +P + ++ ++ I+ L ++
Sbjct: 102 LNLKHALIVGGMDMIRQSIDLSKRP--HVVVATPGRLADLIRSNGEETIAGLR---RIKF 156
Query: 722 IVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVRMDIIHNLQLNNPV 781
+V+DEA + + F D + D + TAT ++ +R + N P
Sbjct: 157 LVMDEADRLLS--PTFADDLDDCFSVLPASEDRQTLLFTATVTDAIRQLKYQPQKNNKPP 214
Query: 782 FLKQSFNRTNLFYQVLKKEKNSIFQMCDMIRTKF----------KNQTGIIYCHSKNSCE 831
N+ V + S + +R + ++ II+ + + E
Sbjct: 215 LWLYEVETDNI--SVPSTLQQSYIFVSSQVREAYLVHLLTIPENAKKSAIIFVNRTRTAE 272
Query: 832 QTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFH 891
++++ ++ H+ M ER ++A+ +++ AT G+D P V+ V +
Sbjct: 273 LIYSILRLLELRVTELHSEMVQRERINSLGRFRAEAAKILVATDVASRGLDIPSVQLVIN 332
Query: 892 FTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQKDKNLDMINKEKHLDKL 951
F +PR + Y GR R G + I + RDV + + +D+ +++ +H+ +
Sbjct: 333 FDLPRDPDDYIHRVGRTARAGRSGESISIVTERDVDLVHAI--EDRVGTKLSEYEHVSE- 389
Query: 952 QQVMQYCDNRTDCRRQLVLSYFNEQFDPKDCGKN 985
++++Y TD +RQ L + F + +N
Sbjct: 390 NKMLEYIKEVTDAKRQASLEMIDRGFGERRQKRN 423
>At5g51280 [A] KOG0341 DEAD-box protein abstrakt
Length = 591
Score = 60.5 bits (145), Expect = 2e-08
Identities = 74/340 (21%), Positives = 141/340 (40%), Gaps = 43/340 (12%)
Query: 598 PNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKS----------GRTSGTTIVVSP 647
P Q++ + L G+D + TG GK+L + LP I+ + ++V P
Sbjct: 171 PIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCP 230
Query: 648 LISLMQ---DQVEHLLAKDIKA------SMFSSKGTAEQRRMTFNLFMNGLLELVYISPE 698
L + + VE +A ++A S+ G R + G+ +V +P
Sbjct: 231 SRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGI--DMRSQLEVVKRGV-HIVVATPG 287
Query: 699 MIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKEL-SFFKQEYPDIPMI 757
+K + KK + + +DEA + + G F D +E+ FK +
Sbjct: 288 RLKDMLAKKKMSLDACRY-----LTLDEADRLVDLG--FEDDIREVFDHFKSQRQ----- 335
Query: 758 ALTATASEQVRMDIIHNLQLNNPVFL---KQSFNRTNLFYQV--LKKEKNSIFQMCDMIR 812
L +A+ ++ I L PV + + ++ +V +K+E ++ + + +
Sbjct: 336 TLLFSATMPTKIQIFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQK 395
Query: 813 TKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVIC 872
T + +I+C +K + + GV+ H G D ++R ++A + V+
Sbjct: 396 T---SPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAGKKDVLV 452
Query: 873 ATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDG 912
AT G+D PD++ V ++ +P +E Y GR GR G
Sbjct: 453 ATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCG 492
>Hs13787209 [A] KOG0331 ATP-dependent RNA helicase
Length = 715
Score = 59.7 bits (143), Expect = 3e-08
Identities = 81/381 (21%), Positives = 150/381 (39%), Gaps = 45/381 (11%)
Query: 581 SEMYHKLRHVFGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVK-----S 635
SE KL G+ P Q + + GKD TG GK+ + +P I K
Sbjct: 126 SEETIKLLKGRGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLHGELQ 185
Query: 636 GRTSGTT---IVVSPLISLMQDQVEHL--LAKDIKASMFSSKGTAEQRRMTFNLFMNGLL 690
R G +V++P L + + K + + F GT + F NG+
Sbjct: 186 DRKRGRAPQVLVLAPTRELANQVSKDFSDITKKLSVACFYG-GTPYGGQ--FERMRNGI- 241
Query: 691 ELVYISPEMIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQE 750
+++ +P IK +Q K + KL +V+DE + + G + + +K++
Sbjct: 242 DILVGTPGRIKDHIQNGKL-----DLTKLKHVVLDEVDQMLDMGFADQVEEILSVAYKKD 296
Query: 751 YPDIPMIALTATASEQVRMDIIHNLQLNNPVFLKQSFNRTNLFYQVLKKEKNSIFQMC-- 808
D P L + ++ ++K ++ + +L + +K ++ +
Sbjct: 297 SEDNPQTLLFSATCPHWVFNVAKK-------YMKSTYEQVDLIGKKTQKTAITVEHLAIK 349
Query: 809 -----------DMIRTKFKNQ-TGIIYCHSKNSCEQTSALMQKNGVK--CAFYHAGMDPD 854
D+IR +Q II+C +K ++ S Q + +K H +
Sbjct: 350 CHWTQRAAVIGDVIRVYSGHQGRTIIFCETKKEAQELS---QNSAIKQDAQSLHGDIPQK 406
Query: 855 ERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNF 914
+R + ++ V+ AT G+D P+V V + P+ +E Y +GR GR G
Sbjct: 407 QREITLKGFRNGSFGVLVATNVAARGLDIPEVDLVIQSSPPKDVESYIHRSGRTGRAGRT 466
Query: 915 SQCIMYYSFRDVRTIQTMIQK 935
CI +Y ++ + + QK
Sbjct: 467 GVCICFYQHKEEYQLVQVEQK 487
>SPAC1006.07 [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 392
Score = 59.3 bits (142), Expect = 4e-08
Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Query: 793 FYQVLKKEKNSIFQMCDMIRTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMD 852
FY ++KE+ + +CD+ T Q +I+C+++ + + + + + H MD
Sbjct: 235 FYVAVEKEEWKLDTLCDLYETVTVTQA-VIFCNTRRKVDWLTEQLTERDFTVSSMHGDMD 293
Query: 853 PDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDG 912
+R + +++ +++ T GID V V ++ +P E Y GR GR G
Sbjct: 294 QAQRDTLMHEFRTGSSRILITTDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFG 353
Query: 913 NFSQCIMYYSFRDVRTIQTMIQ 934
I + + DVR ++ + Q
Sbjct: 354 RKGVSINFVTNDDVRMMREIEQ 375
>ECU10g0690 [A] KOG0345 ATP-dependent RNA helicase
Length = 463
Score = 59.3 bits (142), Expect = 4e-08
Identities = 76/338 (22%), Positives = 140/338 (40%), Gaps = 46/338 (13%)
Query: 600 QLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAI------VKSGRTSGTTIVVSPLISLMQ 653
QL+ + L+GKD V PTG GK++ + P + GR T +V++P L
Sbjct: 31 QLKCIPEVLKGKDVVVQSPTGTGKTMAFLAPILSCIYDGKGRGRPGVTAVVITPTRELAL 90
Query: 654 DQVEHLLAKDIKASMFSSKGTAEQ--RRM--TFNLFM---NGLLELVYISPEMIKASVQC 706
E D+K F + E+ +RM F++ + LLE+V +
Sbjct: 91 QIREVAGLFDVKCECFIGGMSIEEDYKRMKEEFSIAVGTPGRLLEIV---------GKET 141
Query: 707 KKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTA--TAS 764
KK S L+ +V+DEA + +G + + Q +P +T +A+
Sbjct: 142 KKFSS-------LSHLVLDEADKLLGFGFEEK--------LMQLLAKLPRNRVTGLFSAT 186
Query: 765 EQVRMDIIHNLQLNNPVFLKQSFNRTNLFYQ-VLKKEKNSIFQMCDMIRTKFKNQTGIIY 823
+D + + L NPV + N + + ++ + + D++ + I++
Sbjct: 187 RNDSVDKLSRVFLRNPVSINVGNNEMPVALEYIVVSPMEKLLVLMDIV----TGRRCIVF 242
Query: 824 CHSKNSCEQTSALMQKNGV-KCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGID 882
+ + + S L+ + G H + DER +V +++ + C VA GID
Sbjct: 243 FATCSEVDFFSGLVSRAGFGNICKIHGKISQDERNRVYEEFFQRDGLLFCTDVA-ARGID 301
Query: 883 KPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMY 920
V V HF VP+ +GR R+G+ + +++
Sbjct: 302 FRGVDLVVHFDVPKEYSSIVHRSGRTARNGSKGESVLF 339
>At4g33370 [A] KOG0341 DEAD-box protein abstrakt
Length = 542
Score = 59.3 bits (142), Expect = 4e-08
Identities = 74/340 (21%), Positives = 140/340 (40%), Gaps = 43/340 (12%)
Query: 598 PNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKS----------GRTSGTTIVVSP 647
P Q++ + L G+D + TG GK+L + LP I+ + +V+ P
Sbjct: 122 PIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICP 181
Query: 648 LISLMQ---DQVEHLLAKDIK------ASMFSSKGTAEQRRMTFNLFMNGLLELVYISPE 698
L + D VE +A ++ S+ G R ++ G+ +V +P
Sbjct: 182 SRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGV--DMRSQLDVVKKGV-HIVVATPG 238
Query: 699 MIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKEL-SFFKQEYPDIPMI 757
+K + KK +S + +DEA + + G F D + + FK +
Sbjct: 239 RLK-DILAKKKMSL----DACRLLTLDEADRLVDLG--FEDDIRHVFDHFKSQRQ----- 286
Query: 758 ALTATASEQVRMDIIHNLQLNNPVFL---KQSFNRTNLFYQV--LKKEKNSIFQMCDMIR 812
L +A+ ++ I L PV + + ++ +V +K+E ++ + + +
Sbjct: 287 TLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQK 346
Query: 813 TKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVIC 872
T +I+C +K + + GV+ H G D ++R ++A + V+
Sbjct: 347 T---TPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLV 403
Query: 873 ATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDG 912
AT G+D PD++ V ++ +P +E Y GR GR G
Sbjct: 404 ATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCG 443
>ECU09g1640 [A] KOG0326 ATP-dependent RNA helicase
Length = 489
Score = 58.9 bits (141), Expect = 5e-08
Identities = 71/331 (21%), Positives = 135/331 (40%), Gaps = 27/331 (8%)
Query: 592 GLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAI--VKSGRTSGTTIVVSPLI 649
G D P Q+ ++ L GK+ V G GK+ Y +P + + S S I++ P+
Sbjct: 127 GYDFPSPVQVASIPHVLGGKNLLVRSKNGTGKTASYIVPMLNMINSSELSIQGIILVPIR 186
Query: 650 SLMQDQVEHLLAKDIKASMFSSK---GTAEQRRMTFNLFMNGLLELVYISPEMI-----K 701
L ++ + S+ GT+ Q + NG+ +V ++ +
Sbjct: 187 ELALQISRNVKRMSEGTGVISAPVVGGTSMQDDII--RVSNGVHVMVGTPGRIVDLVEKR 244
Query: 702 ASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTA 761
K+ I E KL + E D P K++ + +P +
Sbjct: 245 VGTLSKRVILVFDEADKLLDVTFGETVTKLL---DLLPREKQMLLYSATFPYFVTGFIRR 301
Query: 762 TASEQVRMDIIHNLQLNNPVFLKQSFNRTNLFYQVLKKEKNSIFQMCDMIRTKFKNQTGI 821
+ ++++ L PV +KQ FY +K + + ++R NQ +
Sbjct: 302 YMKNPLCINLMKELA---PVGVKQ-------FYTYVKPSEKLLCLKSLLLRLSI-NQC-V 349
Query: 822 IYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGI 881
I+C+S + E + + + G+ F H+ M ++R V ++ + +++ AT G+
Sbjct: 350 IFCNSIKTVELLAMKITEMGLPSYFIHSKMAQEDRNIVFHNFLKGKCKILVATDLITRGV 409
Query: 882 DKPDVRFVFHFTVPRTLEGYYQETGRAGRDG 912
D P+ +V +F + ++ E Y GRAGR G
Sbjct: 410 DAPNTNYVINFDISKSPESYLHRIGRAGRFG 440
>CE09901 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 involved in
rRNA maturation DEAD-box superfamily
Length = 399
Score = 58.9 bits (141), Expect = 5e-08
Identities = 47/220 (21%), Positives = 102/220 (46%), Gaps = 16/220 (7%)
Query: 722 IVVDEAHCVSNWGHDFRPDYKELSFFKQEY--PDIPMIALTATASEQVRMDIIHNLQLNN 779
+V+DEA + N G +KE + Y P ++ L+AT ++ +++ + +
Sbjct: 172 LVLDEADEMLNKG------FKEQLYDIYRYLPPGAQVVLLSATLPHEI-LEMTSKF-MTD 223
Query: 780 PVFLKQSFNRTNL-----FYQVLKKEKNSIFQMCDMIRTKFKNQTGIIYCHSKNSCEQTS 834
P+ + + L F+ + +E+ + D+ T Q +++C+++ + +
Sbjct: 224 PIRILVKRDELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTITQA-VLFCNTRRKVDWLT 282
Query: 835 ALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTV 894
M++ + H M+ +R +V ++++A +V+ +T + G+D P V V ++ +
Sbjct: 283 DKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDL 342
Query: 895 PRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQ 934
P E Y GR+GR G I + DVR ++ + Q
Sbjct: 343 PNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQ 382
>CE06239 [A] KOG0344 ATP-dependent RNA helicase
Length = 581
Score = 58.9 bits (141), Expect = 5e-08
Identities = 70/357 (19%), Positives = 148/357 (40%), Gaps = 39/357 (10%)
Query: 598 PNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVK----SGRTSGTTIVVSPLISLMQ 653
P Q++++ + ++ PTG GK+L + LP I + R ++ S L++++
Sbjct: 151 PIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVL 210
Query: 654 DQVEHLLAK------------DIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIK 701
+ L A+ I A+ FS + T Q ++ ++ +V+ ++
Sbjct: 211 EPTRELAAQTYTEFLKYCANTSISAANFSGEETDIQHA---DILVSTPNRIVFHLDKIDT 267
Query: 702 ASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIAL-T 760
+S++ + E +L +V + C N + + +K +A +
Sbjct: 268 SSLRWLV----VDESDRLFEVVEGQDKCFRN---------QLAAIYKACDAKCTRVAFFS 314
Query: 761 ATASEQVRMDIIHNLQLNNPVFLKQSFNRTNLFYQVLK---KEKNSIFQMCDMIRTKFKN 817
AT S +V N+ V + + + Q L E + +++RT FK
Sbjct: 315 ATFSHEVEKWCKENIDEIGMVCVGERNSSNTSVKQKLTYCGTEDGKKIAIRNLLRTSFK- 373
Query: 818 QTGIIYCHSKNSCEQTSALMQK--NGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATV 875
+++ SK+ Q L+ + +K ++G ER + + ++ + V+ T
Sbjct: 374 PPALVFVQSKDRAVQLVKLLSAIDSNLKVDSINSGKSDKERDETMERFRRGEIWVLVCTE 433
Query: 876 AFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTM 932
G G+D DV V ++ +P ++ Y GR GR G + Y++ D++ I+++
Sbjct: 434 LLGRGLDLSDVGLVINYDLPTSIVSYIHRVGRTGRAGKSGHAVTYFTDADMKYIKSI 490
>7296646 [A] KOG0331 ATP-dependent RNA helicase
Length = 577
Score = 58.9 bits (141), Expect = 5e-08
Identities = 73/344 (21%), Positives = 136/344 (39%), Gaps = 31/344 (9%)
Query: 608 LQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTSGTTIVVSPLISLMQDQVEHLLAKDIK-- 665
+ G + + TG GK+L Y LPAIV P+ ++ E LA+ I+
Sbjct: 174 MSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRGDGPIALVLAPTRE--LAQQIQQV 231
Query: 666 ASMFSSKGTAEQRRMTFNLFMNGLL-------ELVYISPEMIKASVQCKKAISKLYEHGK 718
A+ F S + G + E+V +P + + K +
Sbjct: 232 ATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLK-----R 286
Query: 719 LARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVRM---DIIHNL 775
+V+DEA + + G F P +++ Q PD + +AT ++V+ D + N
Sbjct: 287 CTYLVLDEADRMLDMG--FEPQIRKI--VSQIRPDRQTLMWSATWPKEVKQLAEDFLGNY 342
Query: 776 QLNNPVFLKQSFNRTNLFYQVL------KKEKNSIFQMCDMIRTKFKNQTGIIYCHSKNS 829
N L+ S N QV+ KE+ + D+ T II+ +K
Sbjct: 343 IQINIGSLELSANHN--IRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRR 400
Query: 830 CEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFV 889
+ ++ GV+C H ER V +++++ + ++ AT G+D +++V
Sbjct: 401 VDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYV 460
Query: 890 FHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMI 933
+F P+ E Y GR GR +++ + + + ++
Sbjct: 461 INFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALV 504
>Hs21040371 [A] KOG0329 ATP-dependent RNA helicase
Length = 427
Score = 58.2 bits (139), Expect = 9e-08
Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 12/220 (5%)
Query: 736 DFRPDYKELSFFKQEYPDIPMIALTATASEQVRMDIIHNLQLNNPVFL----KQSFNRTN 791
D R D +E+ F+ + + +AT S+ +R +Q VF+ K + +
Sbjct: 205 DMRRDVQEI--FRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQ 262
Query: 792 LFYQVLK-KEKN-SIFQMCDMIRTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHA 849
+Y LK EKN +F + D++ NQ II+ S C + L+ + H
Sbjct: 263 QYYVKLKDSEKNRKLFDLLDVLEF---NQV-IIFVKSVQRCMALAQLLVEQNFPAIAIHR 318
Query: 850 GMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAG 909
GM +ER Q ++ + +++ AT FG G+D V VF++ +P + Y RAG
Sbjct: 319 GMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAG 378
Query: 910 RDGNFSQCIMYYSFRDVRTIQTMIQKDKNLDMINKEKHLD 949
R G I + S + I +Q +++ + +D
Sbjct: 379 RFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEID 418
>ECU05g1270 [A] KOG0331 ATP-dependent RNA helicase
Length = 426
Score = 58.2 bits (139), Expect = 9e-08
Identities = 77/317 (24%), Positives = 127/317 (39%), Gaps = 40/317 (12%)
Query: 608 LQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTSGTTIVVSPLISLMQDQVEHLLAKDIKAS 667
L G+ V+ TG GK+L Y LP I +V+ P L+ QV + K +
Sbjct: 91 LAGEGVDVISETGSGKTLSYVLPHIHLLESGDKRLLVIVPTRELVS-QVGQVFRKFSEGL 149
Query: 668 MFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCKKAISKLYEHGKLARIVVDEA 727
+ + T E + L ++ ++ +P ++ ++ K G +VVDEA
Sbjct: 150 LRIVEITGEVSIESQRLQVSRPFDVAISTPGRLRELLELKSI-------GGFEYVVVDEA 202
Query: 728 HCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQV--RMDIIHNLQLNNPVFLKQ 785
+ HD R D ++F + +AT E ++ N+ + V
Sbjct: 203 DRLMQ--HDIRSD---VTFILERMKPEVASFFSATPFEWSGGTRILVGNVSVGRDV---- 253
Query: 786 SFNRTNLFYQVLKKEK----NSIFQMCD--------MIRTKFKNQTGIIYCHSKNSCEQT 833
F V KKEK I C+ + R + + I++C+S +CE
Sbjct: 254 ----EEFFMYVEKKEKMQVLGEILVSCEGWLAKNMGVDRNGLEVKKIIVFCNSIRTCEN- 308
Query: 834 SALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFT 893
+ K + H+ ER V + + +R V+ AT G GID DV V ++
Sbjct: 309 ---LHKRFRQLLVLHSRRTMQERKAVIEALEGERA-VLIATDLGGRGIDIKDVDLVVNYD 364
Query: 894 VPRTLEGYYQETGRAGR 910
+PR ++GY GR GR
Sbjct: 365 LPRAVDGYVHRCGRTGR 381
>At3g18600 [A] KOG0342 ATP-dependent RNA helicase pitchoune
Length = 568
Score = 58.2 bits (139), Expect = 9e-08
Identities = 77/377 (20%), Positives = 151/377 (39%), Gaps = 33/377 (8%)
Query: 600 QLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVK------SGRTSGTTIVVSPL--ISL 651
Q ++ L+GKD TG GK+L + +PA+ S R IV+ P +++
Sbjct: 116 QAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVELLFKERFSPRNGTGVIVICPTRELAI 175
Query: 652 MQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCKKAIS 711
V L K ++ G RR +G LV +P + +Q KA
Sbjct: 176 QTKNVAEELLKHHSQTVSMVIG-GNNRRSEAQRIASGS-NLVIATPGRLLDHLQNTKAF- 232
Query: 712 KLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVRMDI 771
+Y+H K +V+DEA + +F D ++ + + + T T+ ++
Sbjct: 233 -IYKHLKC--LVIDEADRILE--ENFEEDMNKILKILPKTRQTALFSATQTS----KVKD 283
Query: 772 IHNLQLNNPVFLKQSFNRTNLFYQVLKK------EKNSIFQMCDMIRTKFKNQTGIIYCH 825
+ + L +PV + R + + L++ K + + ++ K N+ +++
Sbjct: 284 LARVSLTSPVHVDVDDGRRKVTNEGLEQGYCVVPSKQRLILLISFLK-KNLNKKIMVFFS 342
Query: 826 SKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPD 885
+ S + + +M+ + V + H GMD + R + D+ + ++ T G+D P
Sbjct: 343 TCKSVQFHTEIMKISDVDVSDIHGGMDQNRRTKTFFDFMKAKKGILLCTDVAARGLDIPS 402
Query: 886 VRFVFHFTVPRTLEGYYQETGRA----GRDGNFSQCIMYYSFRDVRTIQTMIQKDKNLDM 941
V ++ + P Y GR G G ++ + +R ++ K L+
Sbjct: 403 VDWIIQYDPPDKPTEYIHRVGRTARGEGAKGKALLVLIPEELQFIRYLKAAKVPVKELEF 462
Query: 942 INKEKHLDKLQQVMQYC 958
EK L +Q ++ C
Sbjct: 463 --NEKRLSNVQSALEKC 477
>YPL119c [A] KOG0335 ATP-dependent RNA helicase
Length = 617
Score = 57.8 bits (138), Expect = 1e-07
Identities = 55/240 (22%), Positives = 104/240 (42%), Gaps = 24/240 (10%)
Query: 710 ISKLYEHGKLAR-----IVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATA- 763
++ L E GK++ +V+DEA + + G F P + + E D+P + T
Sbjct: 298 LNDLLERGKVSLANIKYLVLDEADRMLDMG--FEPQIRHIV----EECDMPSVENRQTLM 351
Query: 764 -SEQVRMDIIHNLQ--LNNPVFLK------QSFNRTNLFYQVLKKEKNSIFQMCDMIRTK 814
S +DI H + L+N +FL S N T V +K S + D++ +
Sbjct: 352 FSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSA--LLDLLSAE 409
Query: 815 FKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICAT 874
K T +I+ +K +Q + + K H ER + ++A+ ++ AT
Sbjct: 410 HKGLT-LIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVADILVAT 468
Query: 875 VAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQ 934
G+D P+V V ++ +P ++ Y GR GR GN +++ + ++ +++
Sbjct: 469 AVAARGLDIPNVTHVINYDLPSDIDDYVHRIGRTGRAGNTGVATSFFNSNNQNIVKGLME 528
>CE23814 [A] KOG0340 ATP-dependent RNA helicase
Length = 696
Score = 57.8 bits (138), Expect = 1e-07
Identities = 105/544 (19%), Positives = 206/544 (37%), Gaps = 64/544 (11%)
Query: 473 EEFEPLSDTDLEEFDAEREDQTQF-----DEIKELDDDLKII-------SEAKLDAEDVP 520
EEFE D + EE +A ED+ + DE K DD K I + K V
Sbjct: 38 EEFEDGEDVEDEEDEASDEDEEESEGEEGDEFKSSDDTPKPIQISEDNMTTKKFSQLGVC 97
Query: 521 LSFAIKKEPKSLDTQLQTELVPVPEVIEDDDFSMAD-LEPYM-------EETEKCTRENS 572
+ + + T + +P+++E D + + Y+ ++ EK + N
Sbjct: 98 SWITQQLQTMQIKTATPVQAACIPKILEGSDILETNYFKKYIFFKIFPKKKIEKLLKFND 157
Query: 573 VQPQYAWTSEMYHKLRHVFGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAI 632
++ + + F + T + K TG GK+L + +P +
Sbjct: 158 KILKFPLKINKFSRKIRFF---------YRKIKKTTEEK---CCARTGTGKTLAFAIPIL 205
Query: 633 VK-SGRTSGT-TIVVSPLISLMQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLL 690
K S G ++++P L E A ++ S + + ++
Sbjct: 206 QKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERP 265
Query: 691 ELVYISPEMIKASVQCKK-AISKLYEHGKLARIVVDEAHCV--SNWGHDFRPDYKELSFF 747
+V +P + ++ I+K+++ K+ V+DEA + + +P ++ +S
Sbjct: 266 HVVVATPGRLADLIESDPDTIAKVFK--KIQFFVLDEADRMLEGQYNDQLKPIFESISEK 323
Query: 748 KQEYPDIPMIALTATASEQVRMDIIHNLQLNNPVFLKQ-------SFNRTNLFYQVLKKE 800
+Q + L+AT + + M +H + P F + + +R Y V
Sbjct: 324 RQT------LLLSATITNNINM--LHRVSTRKPYFFEDKGKDDESTVDRLEQKYVVCPVA 375
Query: 801 KNSIFQMCDMIRTKFKNQTG--IIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQ 858
+ + + KN +I+ + C+ + + + G + H+ + +R
Sbjct: 376 VKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIPQKQRLA 435
Query: 859 VQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCI 918
+++ +QVI T G+D P V V + VP+ + Y GR+ R G F +
Sbjct: 436 ALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSAL 495
Query: 919 MYYSFRDVRTIQTMIQK-DKNLDMIN-KEKHLDKLQQVMQYCDNRTDCRRQLVLSYFNEQ 976
+ + DV +Q + Q K LD + KH+ K Y +++ L N++
Sbjct: 496 SFVTQYDVELLQAVEQVIGKKLDELKVSPKHVTK------YVTQVLVAKKEAELKLENQK 549
Query: 977 FDPK 980
F K
Sbjct: 550 FGEK 553
>7293369 [A] KOG0343 RNA Helicase
Length = 805
Score = 57.8 bits (138), Expect = 1e-07
Identities = 74/371 (19%), Positives = 142/371 (37%), Gaps = 40/371 (10%)
Query: 600 QLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIV-----KSGRTSGT-TIVVSPLISLMQ 653
Q +++ LQGKD TG GK+L + +P + K RT G I++SP L
Sbjct: 99 QRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMNKWSRTDGVGAIIISPTRELAY 158
Query: 654 DQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCKKAISKL 713
Q+ L K K FS+ + + F ++ +P + + + L
Sbjct: 159 -QIFETLKKVGKHHDFSAGLIIGGKNLKFERTRMDQCNILICTPGRLLQHMD----ENPL 213
Query: 714 YEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVRMDIIH 773
+ + +V+DEA + G K L+ + +P + L + D+
Sbjct: 214 FNTSTMEMLVLDEADRCLDMGFQ-----KTLNSIIENFPPVRQTLLFSATQTNTVQDLAR 268
Query: 774 NLQLNNPVFL---------------KQSFNRTNLFYQVLKKEKNSIFQMCD---MIRTKF 815
L L +PV++ K++ N L L ++ + + D M+ +
Sbjct: 269 -LNLKDPVYVGYGGATPREEPSASTKKTPNTAVLAVPELLQQSYVVLNLEDKITMLWSFI 327
Query: 816 KNQTGIIYCHSKNSCEQTSALMQ-----KNGVKCAFYHAGMDPDERFQVQQDWQADRVQV 870
KN SC+Q L + + G + + D R + +D+ V
Sbjct: 328 KNHLKQKIIVFVASCKQAKYLYEIFCKLRPGSPLLALYGTLHQDRRIAIYEDFLRKSHVV 387
Query: 871 ICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQ 930
+ +T G+D P V +V P + Y GR+ R+ +C++ + + +
Sbjct: 388 MFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEEEYMI 447
Query: 931 TMIQKDKNLDM 941
+ +++ N+D+
Sbjct: 448 SALKEQLNIDI 458
>YHR169w [A] KOG0340 ATP-dependent RNA helicase
Length = 431
Score = 57.4 bits (137), Expect = 2e-07
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 4/165 (2%)
Query: 814 KFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICA 873
+++N+T II+ + + E +++ V+ A H+ M ER ++A+ +++ A
Sbjct: 251 EYENKTAIIFVNRTMTAEILRRTLKQLEVRVASLHSQMPQQERTNSLHRFRANAARILIA 310
Query: 874 TVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMI 933
T G+D P V V ++ +P + + +GR R G I + + RDV IQ +
Sbjct: 311 TDVASRGLDIPTVELVVNYDIPSDPDVFIHRSGRTARAGRIGDAISFVTQRDVSRIQAIE 370
Query: 934 QK-DKNLDMINKEKHLDKLQQVMQYCDNRTDCRRQLVLSYFNEQF 977
+ +K + NK +++ + T +R+ +++ E F
Sbjct: 371 DRINKKMTETNKVHDTAVIRKAL---TKVTKAKRESLMAMQKENF 412
>Hs4758112 [A] KOG0329 ATP-dependent RNA helicase
Length = 428
Score = 57.4 bits (137), Expect = 2e-07
Identities = 49/193 (25%), Positives = 87/193 (44%), Gaps = 12/193 (6%)
Query: 736 DFRPDYKELSFFKQEYPDIPMIALTATASEQVRMDIIHNLQLNNPVFL----KQSFNRTN 791
D R D +E+ F+ + ++ +AT S+++R +Q +F+ K + +
Sbjct: 206 DMRRDVQEI--FRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQ 263
Query: 792 LFYQVLK-KEKN-SIFQMCDMIRTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHA 849
+Y LK EKN +F + D++ NQ +I+ S C + L+ + H
Sbjct: 264 QYYVKLKDNEKNRKLFDLLDVLEF---NQV-VIFVKSVQRCIALAQLLVEQNFPAIAIHR 319
Query: 850 GMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAG 909
GM +ER Q ++ + +++ AT FG G+D V F++ +P + Y RAG
Sbjct: 320 GMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAG 379
Query: 910 RDGNFSQCIMYYS 922
R G I + S
Sbjct: 380 RFGTKGLAITFVS 392
>Hs13514813 [A] KOG0335 ATP-dependent RNA helicase
Length = 662
Score = 57.4 bits (137), Expect = 2e-07
Identities = 30/148 (20%), Positives = 64/148 (42%), Gaps = 2/148 (1%)
Query: 786 SFNRTNLFYQVLKKEKNSIFQMCDMIRTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCA 845
S N T V + +K S + D++ K+ +++ +K + + G C
Sbjct: 412 SENITQKVVWVEESDKRSF--LLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACT 469
Query: 846 FYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQET 905
H +R + +++ + ++ AT G+D +V+ V +F +P +E Y
Sbjct: 470 SIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRI 529
Query: 906 GRAGRDGNFSQCIMYYSFRDVRTIQTMI 933
GR GR GN +++ R++ + ++
Sbjct: 530 GRTGRVGNLGLATSFFNERNINITKDLL 557
>YKR059w [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 395
Score = 56.6 bits (135), Expect = 3e-07
Identities = 69/361 (19%), Positives = 158/361 (43%), Gaps = 34/361 (9%)
Query: 587 LRHVFGLDSFRPNQLE--AVNATLQGKDAFVLMPTGGGKSLCYQLPAI--VKSGRTSGTT 642
LR VFG P+ ++ A+ ++G D +G GK+ + + A+ + + +
Sbjct: 34 LRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQA 93
Query: 643 IVVSPL--ISLMQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGL--LELVYISPE 698
++++P ++L +V LA + + + G +F GL ++V +P
Sbjct: 94 LMLAPTRELALQIQKVVMALAFHMDIKVHACIGGT-----SFVEDAEGLRDAQIVVGTPG 148
Query: 699 MIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSF--FKQEYPDIPM 756
+ ++Q ++ + K+ ++DEA + + G +KE + F P +
Sbjct: 149 RVFDNIQRRR-----FRTDKIKMFILDEADEMLSSG------FKEQIYQIFTLLPPTTQV 197
Query: 757 IALTATASEQVRMDIIHNLQLNNPVFLKQSFNRTNL-----FYQVLKKEKNSIFQMCDMI 811
+ L+AT V +++ + NPV + + L FY +++E+ + D+
Sbjct: 198 VLLSATMPNDV-LEVTTKF-MRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLY 255
Query: 812 RTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVI 871
+ Q +I+C+++ E+ + ++ + + ++ + ER + +++++ +++
Sbjct: 256 DSISVTQA-VIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRIL 314
Query: 872 CATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQT 931
+T GID V V ++ +P E Y GR GR G I + + DV ++
Sbjct: 315 ISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRE 374
Query: 932 M 932
+
Sbjct: 375 L 375
>YJL138c [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 395
Score = 56.6 bits (135), Expect = 3e-07
Identities = 69/361 (19%), Positives = 158/361 (43%), Gaps = 34/361 (9%)
Query: 587 LRHVFGLDSFRPNQLE--AVNATLQGKDAFVLMPTGGGKSLCYQLPAI--VKSGRTSGTT 642
LR VFG P+ ++ A+ ++G D +G GK+ + + A+ + + +
Sbjct: 34 LRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQA 93
Query: 643 IVVSPL--ISLMQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGL--LELVYISPE 698
++++P ++L +V LA + + + G +F GL ++V +P
Sbjct: 94 LMLAPTRELALQIQKVVMALAFHMDIKVHACIGGT-----SFVEDAEGLRDAQIVVGTPG 148
Query: 699 MIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSF--FKQEYPDIPM 756
+ ++Q ++ + K+ ++DEA + + G +KE + F P +
Sbjct: 149 RVFDNIQRRR-----FRTDKIKMFILDEADEMLSSG------FKEQIYQIFTLLPPTTQV 197
Query: 757 IALTATASEQVRMDIIHNLQLNNPVFLKQSFNRTNL-----FYQVLKKEKNSIFQMCDMI 811
+ L+AT V +++ + NPV + + L FY +++E+ + D+
Sbjct: 198 VLLSATMPNDV-LEVTTKF-MRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLY 255
Query: 812 RTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVI 871
+ Q +I+C+++ E+ + ++ + + ++ + ER + +++++ +++
Sbjct: 256 DSISVTQA-VIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRIL 314
Query: 872 CATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQT 931
+T GID V V ++ +P E Y GR GR G I + + DV ++
Sbjct: 315 ISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRE 374
Query: 932 M 932
+
Sbjct: 375 L 375
>Hs4503529 [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 406
Score = 56.6 bits (135), Expect = 3e-07
Identities = 72/364 (19%), Positives = 143/364 (38%), Gaps = 48/364 (13%)
Query: 589 HVFGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAI--VKSGRTSGTTIVVS 646
+ +G + Q A+ ++G D +G GK+ + + + ++ + +V++
Sbjct: 48 YAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLA 107
Query: 647 PLISLMQD--QVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNG-------------LLE 691
P L Q +V L + AS + G R L M +L
Sbjct: 108 PTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLN 167
Query: 692 LVYISPEMIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEY 751
Y+SP+ IK V+DEA + + G F+ ++ F++
Sbjct: 168 RRYLSPKYIKM-------------------FVLDEADEMLSRG--FKDQIYDI--FQKLN 204
Query: 752 PDIPMIALTATASEQVRMDIIHNLQLNNPVFLKQSFNRTNL-----FYQVLKKEKNSIFQ 806
+ ++ L+AT V +++ + +P+ + L FY +++E+ +
Sbjct: 205 SNTQVVLLSATMPSDV-LEVTKKF-MRDPIRILVKKEELTLEGIRQFYINVEREEWKLDT 262
Query: 807 MCDMIRTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQAD 866
+CD+ T Q +I+ +++ + + M + H MD ER + +++++
Sbjct: 263 LCDLYETLTITQA-VIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSG 321
Query: 867 RVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDV 926
+V+ T GID V V ++ +P E Y GR GR G I + D
Sbjct: 322 SSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDK 381
Query: 927 RTIQ 930
RT++
Sbjct: 382 RTLR 385
>Hs4759278 [A] KOG0333 U5 snRNP-like RNA helicase subunit
Length = 820
Score = 56.2 bits (134), Expect = 3e-07
Identities = 72/366 (19%), Positives = 139/366 (37%), Gaps = 47/366 (12%)
Query: 598 PNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIV-----------KSGRTSGTTIVVS 646
P Q +A+ LQ +D + TG GK+ + +P +V + I+++
Sbjct: 416 PIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILA 475
Query: 647 PLISLMQDQVEHLL--AKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASV 704
P L Q E + K + + G + F L M E+V +P + +
Sbjct: 476 PTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMG--CEIVIATPGRLIDVL 533
Query: 705 QCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFF---KQEYPDIP------ 755
+ + + + +V+DEA + + G F PD +++ + PD
Sbjct: 534 ENRYLVLS-----RCTYVVLDEADRMIDMG--FEPDVQKILEHMPVSNQKPDTDEAEDPE 586
Query: 756 -MIALTATASEQVRMDIIHNLQLNNPV--FLKQSFNRTNLFY-----QVLKKEKNSIFQM 807
M+A + + R ++ + V + R + Y + ++ + +F M
Sbjct: 587 KMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLM 646
Query: 808 CDMIRTKFK--------NQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQV 859
+ + K + II+ + K C+ + ++K G H G ++R
Sbjct: 647 SESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFA 706
Query: 860 QQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIM 919
+ +A ++ AT G GID DV V ++ + + +E Y GR GR G I
Sbjct: 707 LSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAIT 766
Query: 920 YYSFRD 925
+ + D
Sbjct: 767 FLTKED 772
>Hs17474597 [A] KOG0333 U5 snRNP-like RNA helicase subunit
Length = 820
Score = 56.2 bits (134), Expect = 3e-07
Identities = 72/366 (19%), Positives = 139/366 (37%), Gaps = 47/366 (12%)
Query: 598 PNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIV-----------KSGRTSGTTIVVS 646
P Q +A+ LQ +D + TG GK+ + +P +V + I+++
Sbjct: 416 PIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILA 475
Query: 647 PLISLMQDQVEHLL--AKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASV 704
P L Q E + K + + G + F L M E+V +P + +
Sbjct: 476 PTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMG--CEIVIATPGRLIDVL 533
Query: 705 QCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFF---KQEYPDIP------ 755
+ + + + +V+DEA + + G F PD +++ + PD
Sbjct: 534 ENRYLVLS-----RCTYVVLDEADRMIDMG--FEPDVQKILEHMPVSNQKPDTDEAEDPE 586
Query: 756 -MIALTATASEQVRMDIIHNLQLNNPV--FLKQSFNRTNLFY-----QVLKKEKNSIFQM 807
M+A + + R ++ + V + R + Y + ++ + +F M
Sbjct: 587 KMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLM 646
Query: 808 CDMIRTKFK--------NQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQV 859
+ + K + II+ + K C+ + ++K G H G ++R
Sbjct: 647 SESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFA 706
Query: 860 QQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIM 919
+ +A ++ AT G GID DV V ++ + + +E Y GR GR G I
Sbjct: 707 LSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAIT 766
Query: 920 YYSFRD 925
+ + D
Sbjct: 767 FLTKED 772
>At5g11200 [A] KOG0329 ATP-dependent RNA helicase
Length = 427
Score = 56.2 bits (134), Expect = 3e-07
Identities = 73/365 (20%), Positives = 146/365 (40%), Gaps = 32/365 (8%)
Query: 600 QLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTSGTTIVVSPLISLMQDQVEHL 659
Q E + + G D +G GK+ + L + + + G VS L+ ++ +
Sbjct: 73 QHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQ---VSALVLCHTRELAYQ 129
Query: 660 LAK----------DIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCKKA 709
+ D K S+F + + +L N +V +P + A + K
Sbjct: 130 ICNEFVRFSTYLPDTKVSVFYGGVNIKIHK---DLLKNECPHIVVGTPGRVLALAREKDL 186
Query: 710 ISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVRM 769
K H ++DE + D R D +E+ FK D ++ +AT S+++R
Sbjct: 187 SLKNVRH-----FILDECDKMLE-SLDMRRDVQEI--FKMTPHDKQVMMFSATLSKEIRP 238
Query: 770 DIIHNLQLNNPVFLKQSFNRT-----NLFYQVLKKEKNSIFQMCDMIRTKFKNQTGIIYC 824
+Q +++ T + ++ + EKN ++ D++ NQ +I+
Sbjct: 239 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNR--KLNDLLDALDFNQV-VIFV 295
Query: 825 HSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKP 884
S + + + L+ + H+GM +ER + ++ +++ AT G GID
Sbjct: 296 KSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIE 355
Query: 885 DVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQKDKNLDMINK 944
V V ++ +P + + Y GRAGR G I + + + +Q+ +D+
Sbjct: 356 RVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKEL 415
Query: 945 EKHLD 949
+ +D
Sbjct: 416 PEQID 420
>YDL084w [A] KOG0329 ATP-dependent RNA helicase
Length = 446
Score = 55.5 bits (132), Expect = 6e-07
Identities = 74/349 (21%), Positives = 138/349 (39%), Gaps = 26/349 (7%)
Query: 600 QLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTSGTTIVV---SPLISLMQDQV 656
Q + ++ G D +G GK+ + L + + G VV + Q +
Sbjct: 89 QQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEVAVVVICNARELAYQIRN 148
Query: 657 EHL----LAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCKKAISK 712
E+L D+K ++F GT + + +V +P +KA V+ K
Sbjct: 149 EYLRFSKYMPDVKTAVFYG-GTPISKDAELLKNKDTAPHIVVATPGRLKALVR-----EK 202
Query: 713 LYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVRMDII 772
+ + V+DE V D R D +E+ F+ D ++ +AT S+++R
Sbjct: 203 YIDLSHVKNFVIDECDKVLE-ELDMRRDVQEI--FRATPRDKQVMMFSATLSQEIRPICR 259
Query: 773 HNLQLNNPVFLKQSFNRT-----NLFYQVLKKEKN-SIFQMCDMIRTKFKNQTGIIYCHS 826
LQ +F+ T + ++ ++EKN + Q+ D + NQ II+ S
Sbjct: 260 RFLQNPLEIFVDDEAKLTLHGLQQYYIKLEEREKNRKLAQLLDDLEF---NQV-IIFVKS 315
Query: 827 KNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDV 886
+ + L+ + H M +ER + ++ ++ +T FG GID +
Sbjct: 316 TTRANELTKLLNASNFPAITVHGHMKQEERIARYKAFKDFEKRICVSTDVFGRGIDIERI 375
Query: 887 RFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQK 935
++ + + Y GRAGR G I + S ++ + IQ+
Sbjct: 376 NLAINYDLTNEADQYLHRVGRAGRFGTKGLAISFVSSKEDEEVLAKIQE 424
>At5g11170 [A] KOG0329 ATP-dependent RNA helicase
Length = 435
Score = 55.5 bits (132), Expect = 6e-07
Identities = 73/363 (20%), Positives = 143/363 (39%), Gaps = 28/363 (7%)
Query: 600 QLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTSGTTIVVSPLISLMQDQVEHL 659
Q E + + G D +G GK+ + L + + + G VS L+ ++ +
Sbjct: 73 QHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQ---VSALVLCHTRELAYQ 129
Query: 660 LAK----------DIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCKKA 709
+ D K S+F + + +L N +V +P + A + K
Sbjct: 130 ICNEFVRFSTYLPDTKVSVFYGGVNIKIHK---DLLKNECPHIVVGTPGRVLALAREKDL 186
Query: 710 ISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVRM 769
K H ++DE + D R D +E+ FK D ++ +AT S+++R
Sbjct: 187 SLKNVRH-----FILDECDKMLE-SLDMRRDVQEI--FKMTPHDKQVMMFSATLSKEIRP 238
Query: 770 DIIHNLQLNNPVFLKQSFNRT--NLFYQVLK-KEKNSIFQMCDMIRTKFKNQTGIIYCHS 826
+Q +++ T L +K E ++ D++ NQ +I+ S
Sbjct: 239 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKTRKLNDLLDALDFNQV-VIFVKS 297
Query: 827 KNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDV 886
+ + + L+ + H+GM +ER + ++ +++ AT G GID V
Sbjct: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERV 357
Query: 887 RFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQKDKNLDMINKEK 946
V ++ +P + + Y GRAGR G I + + + +Q+ +D+ +
Sbjct: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPE 417
Query: 947 HLD 949
+D
Sbjct: 418 QID 420
>Hs4503531 [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 407
Score = 54.7 bits (130), Expect = 1e-06
Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 793 FYQVLKKEKNSIFQMCDMIRTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMD 852
FY +++E+ + +CD+ T Q +I+ +++ + + M + H MD
Sbjct: 250 FYINVEREEWKLDTLCDLYETLTITQA-VIFLNTRRKVDWLTEKMHARDFTVSALHGDMD 308
Query: 853 PDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDG 912
ER + +++++ +V+ T GID V V ++ +P E Y GR GR G
Sbjct: 309 QKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFG 368
Query: 913 NFSQCIMYYSFRDVRTIQ 930
I + + D R ++
Sbjct: 369 RKGVAINFVTEEDKRILR 386
>SPCC63.11 [A] KOG0333 U5 snRNP-like RNA helicase subunit
Length = 662
Score = 54.3 bits (129), Expect = 1e-06
Identities = 72/357 (20%), Positives = 137/357 (38%), Gaps = 39/357 (10%)
Query: 600 QLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTSGTT----------IVVSPLI 649
Q A+ LQ KD + TG GK+ + +P I+ + T +V++P
Sbjct: 276 QRAAIPVLLQRKDLIGIAETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTR 335
Query: 650 SLMQD-QVE-HLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCK 707
L Q QVE + A+ + S G +F + +V +P + ++
Sbjct: 336 ELAQQIQVEGNKFAEPLGFRCVSVVGGHAFEEQSFQMSQGA--HIVVATPGRLLDCLE-- 391
Query: 708 KAISKLYEHGKLARIVVDEAHCVSNWGH--DFRPDYKELSFFKQEYPDIPMIALTATASE 765
+L+ + +V+DEA + + G D L D ++A TA +S
Sbjct: 392 ---RRLFVLSQCTYVVMDEADRMLDMGFEDDVNKILSSLPSSNASEKDGSILA-TANSSS 447
Query: 766 QVRMDIIHNLQLN------------NPVFLK-----QSFNRTNLFYQVLKKEKNSIFQMC 808
R I+ + L PV L Q+ +R +++ + ++
Sbjct: 448 SRRQTIMFSATLPPRVANLAKSYLIEPVMLTIGNIGQAVDRVEQRVEMISDDSKKWRRVE 507
Query: 809 DMIRTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRV 868
+++ + + II+ + K + E + + G H ++R + + +
Sbjct: 508 EILESNRFSPPIIIFVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNKTA 567
Query: 869 QVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRD 925
++ AT G GID P+V V ++ + +++E Y GR GR G I + D
Sbjct: 568 DILVATDIAGRGIDIPNVSLVLNYNMAKSIEDYTHRIGRTGRAGKSGTAITFLGPED 624
>At3g53110 [A] KOG0332 ATP-dependent RNA helicase
Length = 496
Score = 54.3 bits (129), Expect = 1e-06
Identities = 49/203 (24%), Positives = 90/203 (44%), Gaps = 14/203 (6%)
Query: 722 IVVDEA-HCVSNWGHDFRPD-YKELSFFKQEYPDIPMIALTATASEQVRMDIIHNLQLNN 779
+V DEA H ++ G FR D K + + P+ ++ +AT +E V+ + ++ N
Sbjct: 242 LVFDEADHMLATDG--FRDDSLKIMKDIGRVNPNFQVLLFSATFNETVKDFVARTVKDPN 299
Query: 780 PVFLKQ---SFNRTNLFYQVLKKEKNSIFQMCDMIRTKFKNQTGIIYCHSKNSCEQTSAL 836
+F+K+ + + + V KE+N I + D I II+ +K S ++
Sbjct: 300 QLFVKREDLALDSVKQYKVVCPKEQNKIEVIKDQIMELGDIGQTIIFVKTKASAQKVHKA 359
Query: 837 MQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPR 896
+ + G H + +R ++ ++++ QV+ AT G D+ V V ++ +P
Sbjct: 360 LAEMGYDVTSVHGNLTESDRDKIVKEFKECLTQVLIATDVIARGFDQQRVNLVVNYNLPT 419
Query: 897 TLEG-------YYQETGRAGRDG 912
E Y GRAGR G
Sbjct: 420 KYETGEPDYEVYLHRVGRAGRFG 442
>SPAC17G6.14c [A] KOG0329 ATP-dependent RNA helicase
Length = 434
Score = 53.9 bits (128), Expect = 2e-06
Identities = 57/259 (22%), Positives = 111/259 (42%), Gaps = 9/259 (3%)
Query: 696 SPEMIKASVQCKKAI--SKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPD 753
SP ++ A+ A+ K+ + + V+DE + D R D +E+ F+ P
Sbjct: 173 SPHIVVATPGRLNALVREKILKVNSVKHFVLDECDKLLE-SVDMRRDIQEV--FRATPPQ 229
Query: 754 IPMIALTATASEQVRMDIIHNLQLNNPVFLKQSFNRTNLFYQ---VLKKEKNSIFQMCDM 810
++ +AT S ++R +Q +++ T Q V +EK ++ D+
Sbjct: 230 KQVMMFSATLSNEIRPICKKFMQNPLEIYVDDETKLTLHGLQQHYVKLEEKAKNRKINDL 289
Query: 811 IRTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQV 870
+ + NQ +I+ S + + L+++ H G+ +ER + + ++ ++
Sbjct: 290 LDSLEFNQV-VIFVKSVSRANELDRLLRECNFPSICIHGGLPQEERIKRYKAFKDFDKRI 348
Query: 871 ICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQ 930
AT FG GID V V ++ +P + + Y GRAGR G I + S + I
Sbjct: 349 CVATDVFGRGIDIERVNIVINYDMPDSPDSYLHRVGRAGRFGTKGLAITFSSSEEDSQIL 408
Query: 931 TMIQKDKNLDMINKEKHLD 949
IQ+ +++ +D
Sbjct: 409 DKIQERFEVNITELPDEID 427
>At1g54270 [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 412
Score = 53.9 bits (128), Expect = 2e-06
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 1/137 (0%)
Query: 793 FYQVLKKEKNSIFQMCDMIRTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMD 852
FY ++KE + +CD+ T Q+ +I+ +++ + + M+ + H MD
Sbjct: 255 FYVNVEKEDWKLETLCDLYETLAITQS-VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMD 313
Query: 853 PDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDG 912
+ R + +++++ +V+ T GID V V +F +P E Y GR+GR G
Sbjct: 314 QNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFG 373
Query: 913 NFSQCIMYYSFRDVRTI 929
I + + D R +
Sbjct: 374 RKGVAINFVTLDDQRML 390
>Hs21071032 [A] KOG0341 DEAD-box protein abstrakt
Length = 622
Score = 53.5 bits (127), Expect = 2e-06
Identities = 25/93 (26%), Positives = 44/93 (46%)
Query: 821 IIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMG 880
+I+ K + + GV+ H G D +ER + + ++ + V+ AT G
Sbjct: 436 LIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKG 495
Query: 881 IDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGN 913
+D P ++ V ++ +P +E Y GR GR GN
Sbjct: 496 LDFPAIQHVINYDMPEEIENYVHRIGRTGRSGN 528
>At3g22330 [A] KOG0331 ATP-dependent RNA helicase
Length = 620
Score = 53.5 bits (127), Expect = 2e-06
Identities = 69/362 (19%), Positives = 134/362 (36%), Gaps = 46/362 (12%)
Query: 592 GLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAI-------VKSGRTSGTTIV 644
G++ P Q + ++G+D TG GK+L + +P I K GR +
Sbjct: 123 GIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKYNAKHGRGRNPLCL 182
Query: 645 VSPLISLMQDQVEHLLAKDIKA----SMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMI 700
V + QVE + + ++ +Q R +L Y +
Sbjct: 183 VLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMR-----------QLDY----GV 227
Query: 701 KASVQCKKAISKLYEHGKLAR-----IVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIP 755
+V + L + G L +V+DEA + G +++ ++ P+
Sbjct: 228 DVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFA-----EDVEIILEKLPEKR 282
Query: 756 M-IALTATASEQVRMDIIHNLQLNNPVFLK------QSFNRTNLFYQVLKKEKNSIFQMC 808
+ +AT +R + LNNP+ + Q Y ++ +
Sbjct: 283 QSMMFSATMPSWIRS--LTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASIIG 340
Query: 809 DMIRTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRV 868
++ K I++ +K ++ S + ++ KC H + +R + ++
Sbjct: 341 PLVTEHAKGGKCIVFTQTKRDADRLSYALARS-FKCEALHGDISQSQRERTLAGFRDGHF 399
Query: 869 QVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRT 928
++ AT G+D P+V + H+ +P E + TGR GR G I+ YS R
Sbjct: 400 NILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRA 459
Query: 929 IQ 930
++
Sbjct: 460 VK 461
>At3g13920 [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 412
Score = 53.5 bits (127), Expect = 2e-06
Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 1/137 (0%)
Query: 793 FYQVLKKEKNSIFQMCDMIRTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMD 852
FY ++KE+ + +CD+ T Q+ +I+ +++ + + M+ + H MD
Sbjct: 255 FYVNVEKEEWKLETLCDLYETLAITQS-VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMD 313
Query: 853 PDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDG 912
+ R + +++++ +V+ T GID V V +F +P E Y GR+GR G
Sbjct: 314 QNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFG 373
Query: 913 NFSQCIMYYSFRDVRTI 929
I + + D R +
Sbjct: 374 RKGVAINFVTRDDERML 390
>At1g72730 [J] KOG0327 Translation initiation factor 4F helicase subunit
(eIF-4A) and related helicases
Length = 414
Score = 53.5 bits (127), Expect = 2e-06
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 1/135 (0%)
Query: 793 FYQVLKKEKNSIFQMCDMIRTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMD 852
FY + KE+ + +CD+ T Q+ +I+ +++ + + M+ + H MD
Sbjct: 257 FYVNVDKEEWKLETLCDLYETLAITQS-VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMD 315
Query: 853 PDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDG 912
+ R + +++++ +V+ T GID V V +F +P E Y GR+GR G
Sbjct: 316 QNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFG 375
Query: 913 NFSQCIMYYSFRDVR 927
I + + D R
Sbjct: 376 RKGVAINFMTSEDER 390
>7294824 [K] KOG4284 DEAD box protein
Length = 1028
Score = 53.5 bits (127), Expect = 2e-06
Identities = 71/335 (21%), Positives = 136/335 (40%), Gaps = 39/335 (11%)
Query: 600 QLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTSGT---TIVVSPLISL---MQ 653
Q A+ L D + +G GK+L Y + A+V+S + ++V P L +Q
Sbjct: 52 QAAAIPMALAKMDLIIQSKSGTGKTLIYVI-AVVQSFNPNINQPHAMIVVPTRELAIQVQ 110
Query: 654 DQVEHLLA--KDIKASMF--SSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQCKKA 709
D HL +D K S F + +++RM + + G +P + +
Sbjct: 111 DTFFHLCKSFRDFKCSAFIGGTDVAKDRKRMNESRVIIG-------TPGRLLHLYE---- 159
Query: 710 ISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVRM 769
+++++ KL +V+DEA + + + +S + P I + +A+ +
Sbjct: 160 -NRVFDVSKLRLLVLDEADQL----YQTKSLQHTVSKLIEAMPKNRQI-IACSATYDQNL 213
Query: 770 DIIHNLQLNNPVFLKQSFNRTNL-----FYQVLKKEKNSI------FQMCDMIRTKFKNQ 818
D ++ P+ + S T L F L ++ NS+ Q+ I + +
Sbjct: 214 DERLAKVMDKPMLISNSERATVLLGIRQFVYELPQQNNSVEEMRLKLQILGQIFNQLPYE 273
Query: 819 TGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFG 878
II+ S+ + + +G+ C M+ ER V + ++ ++++ AT
Sbjct: 274 QAIIFASSQMRADSYKNYLTASGIDCHLISGAMEQSERLHVFEGYRNFTMRILVATDLMA 333
Query: 879 MGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGN 913
G+D P V + P+ Y GRAGR G+
Sbjct: 334 RGVDSPHANLVINIDPPQDHVTYLHRIGRAGRFGS 368
>YGL251c [A] KOG0952 DNA/RNA helicase MER3/SLH1 DEAD-box superfamily
Length = 1187
Score = 53.1 bits (126), Expect = 3e-06
Identities = 99/509 (19%), Positives = 195/509 (37%), Gaps = 85/509 (16%)
Query: 548 EDDDFSMA-------------DLEPYMEETEKCTRENSVQP---QYAWTSEMYHKLRHVF 591
+DD+FS+ DLE +E K ++ +++ + T+ + R VF
Sbjct: 75 KDDNFSITADDTQVTSKLFDHDLEQTPDEEAKKPKKVTIRKSAKKCLSTTILPDSFRGVF 134
Query: 592 GLDSFRPNQLEAVNATLQGKDAFVLM-PTGGGKSLCYQLPAIVKSGRTSGTT-----IVV 645
F Q EA + + + ++ PTG GK++ ++L + T+ T I +
Sbjct: 135 KFTEFNKMQSEAFPSIYESNENCIISSPTGSGKTVLFELAILRLIKETNSDTNNTKIIYI 194
Query: 646 SPLISLMQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVYISPEMIKASVQ 705
+P SL + ++ + S+ G ++ +PE +
Sbjct: 195 APTKSLCYEMYKNWFPSFVNLSV----GMLTSDTSFLETEKAKKCNIIITTPEKWDLLTR 250
Query: 706 CKKAISKLYEHGKLARIVVDEAHCVSNW-GHDFRPDYKELSFFKQEY---------PDIP 755
S+L+E KL ++VDE H + G ++ Q P+I
Sbjct: 251 RWSDYSRLFELVKL--VLVDEIHTIKEKRGASLEVILTRMNTMCQNIRFVALSATVPNIE 308
Query: 756 MIALTATASEQVRMDII------HNLQLNNPVFLKQSFNRTNLFYQVLKKEKNSIF--QM 807
+AL + ++ +I+ +QL V+ SFN N F +K++I+ ++
Sbjct: 309 DLALWLKTNNELPANILSFDESYRQVQLTKFVY-GYSFNCKNDF------QKDAIYNSKL 361
Query: 808 CDMIRTKFKNQTGIIYCHSKNSCEQTSALMQKNGV------KC----------------- 844
++I N+ +I+C ++ S T+ + N + +C
Sbjct: 362 IEIIEKHADNRPVLIFCPTRASTISTAKFLLNNHIFSKSKKRCNHNPSDKILNECMQQGI 421
Query: 845 AFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTV---PRTLEGY 901
AF+HAG+ ++R V++++ A + ++C+T +G++ P + T ++ Y
Sbjct: 422 AFHHAGISLEDRTAVEKEFLAGSINILCSTSTLAVGVNLPAYLVIIKGTKSWNSSEIQEY 481
Query: 902 -----YQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQKDKNLDMINKEKHLDKLQQVMQ 956
Q GRAGR F D + QT D++ HL+ ++ +
Sbjct: 482 SDLDVLQMIGRAGRP-QFETHGCAVIMTDSKMKQTYENLIHGTDVLESSLHLNLIEHLAA 540
Query: 957 YCDNRTDCRRQLVLSYFNEQFDPKDCGKN 985
T + +++ F GKN
Sbjct: 541 ETSLETVYSIETAVNWLRNTFFYVRFGKN 569
>At5g65900 [A] KOG0342 ATP-dependent RNA helicase pitchoune
Length = 633
Score = 53.1 bits (126), Expect = 3e-06
Identities = 106/509 (20%), Positives = 209/509 (40%), Gaps = 66/509 (12%)
Query: 479 SDTDLEEFDAEREDQTQFDEIKEL-------DDDLKIISEAKLDAEDVPLSFAIKKEPKS 531
+D +E AE E + + + K+L D++ ++I+E E+ P KK+ +
Sbjct: 73 TDDGEDEAVAEEEPKKKKKKNKKLQQRGDTNDEEDEVIAE-----EEEPKK---KKKKQR 124
Query: 532 LDTQLQTELVPVPEVIEDDDFSMADLEPYMEETEKCTRENSVQPQYAWTSEMYHKLRHVF 591
DT+ ++E E +ED + E +EET T N + + Y ++ +
Sbjct: 125 KDTEAKSE----EEEVEDKEE-----EKKLEETSIMT--NKTFESLSLSDNTYKSIKEM- 172
Query: 592 GLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAI-----VKSGRTSGT-TIVV 645
G Q +A+ + G+D TG GK+L + +PA+ VK +GT +V+
Sbjct: 173 GFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVELLYRVKFTPRNGTGVLVI 232
Query: 646 SPLISLMQDQVEHLLAKDIKASMFSSKGT---AEQRRMTFNLFMNGLLELVYISPEMIKA 702
P L + +AK++ + G E+R+ + G+ LV ++
Sbjct: 233 CPTRELAIQ--SYGVAKELLKYHSQTVGKVIGGEKRKTEAEILAKGVNLLVATPGRLLDH 290
Query: 703 SVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTA- 761
I K L +V+DEA + +F D K++ +P T+
Sbjct: 291 LENTNGFIFK-----NLKFLVMDEADRILE--QNFEEDLKKILNL------LPKTRQTSL 337
Query: 762 -TASEQVRMDIIHNLQLNNPVFLKQSFNRTNLF-------YQVLKKEKNSIFQMCDMIRT 813
+A++ +++ + + L +PV++ R + Y V+ +F + + R
Sbjct: 338 FSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLTFLKRF 397
Query: 814 KFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQV-QQDWQADRVQVIC 872
+ K + + + K S + + L + C G+D ++R Q +A+ ++C
Sbjct: 398 QGKKKIMVFFSTCK-STKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIKAETGILLC 456
Query: 873 ATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGR-DGNFSQCIMYYSFRDVRTIQT 931
VA G+D P V ++ + P Y GR R +G + ++ + ++++ IQ
Sbjct: 457 TNVA-ARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALLVLTPQELKFIQY 515
Query: 932 MIQKDKNLDMINKEKHLDKLQQVMQYCDN 960
+ K + + E KL V + +N
Sbjct: 516 L--KAAKIPVEEHEFEEKKLLDVKPFVEN 542
>At1g51380 [J] KOG0328 Predicted ATP-dependent RNA helicase FAL1 involved in
rRNA maturation DEAD-box superfamily
Length = 392
Score = 52.8 bits (125), Expect = 4e-06
Identities = 32/138 (23%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Query: 793 FYQVLKKEKNSIFQMCDMIRTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMD 852
+Y + KE+ +CD+ NQ II+C+++ + + M+ + + H
Sbjct: 238 YYVDVDKEEWKFDTLCDLYGRLTINQA-IIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKR 296
Query: 853 PDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDG 912
ER + +++ + +V+ A+ + GID V V ++ +P E Y GRAGR G
Sbjct: 297 QKERDDIMNQFRSFKSRVLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFG 356
Query: 913 NFSQCIMYYSFRDVRTIQ 930
I + D++ ++
Sbjct: 357 REGVAINFVKSSDMKDLK 374
>Hs13514809 [A] KOG0335 ATP-dependent RNA helicase
Length = 660
Score = 52.4 bits (124), Expect = 5e-06
Identities = 23/127 (18%), Positives = 55/127 (43%)
Query: 807 MCDMIRTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQAD 866
+ D++ + +++ +K + + G C H +R + +++
Sbjct: 429 LLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSG 488
Query: 867 RVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDV 926
+ ++ AT G+D +VR V +F +P +E Y GR GR GN +++ +++
Sbjct: 489 KSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNM 548
Query: 927 RTIQTMI 933
+ ++
Sbjct: 549 NITKDLL 555
>SPCC1795.11 [A] KOG0335 ATP-dependent RNA helicase
Length = 636
Score = 52.0 bits (123), Expect = 6e-06
Identities = 31/137 (22%), Positives = 59/137 (42%), Gaps = 2/137 (1%)
Query: 786 SFNRTNLFYQVLKKEKNSIFQMCDMIRTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCA 845
S N T V EK S + D++ T +I+ +K + + + +
Sbjct: 401 SENITQKVVHVEDSEKRSY--LLDILHTLPPEGLTLIFVETKRMADTLTDYLLNSNFPAT 458
Query: 846 FYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQET 905
H ER + + +++ R ++ AT G+D P+V V ++ +P ++ Y
Sbjct: 459 SIHGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYDLPTDIDDYVHRI 518
Query: 906 GRAGRDGNFSQCIMYYS 922
GR GR GN Q + +++
Sbjct: 519 GRTGRAGNTGQAVAFFN 535
>Hs14251212 [K] KOG4284 DEAD box protein
Length = 824
Score = 52.0 bits (123), Expect = 6e-06
Identities = 52/256 (20%), Positives = 98/256 (37%), Gaps = 17/256 (6%)
Query: 689 LLELVYISPEMIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFK 748
L+EL Y++P I+ + + KL E G + NW + P K++
Sbjct: 194 LIELDYLNPGSIRLFILDEA--DKLLEEGSFQEQI--------NWIYSSLPASKQMLAVS 243
Query: 749 QEYPDIPMIALTATASEQVRMDIIHNLQLNNP--VFLKQSFNRTNLFYQVLKKEKNSIFQ 806
YP+ ALT + +R L ++P + LKQ + N Y + K Q
Sbjct: 244 ATYPEFLANALT----KYMRDPTFVRLNSSDPSLIGLKQYYKVVNS-YPLAHKVFEEKTQ 298
Query: 807 MCDMIRTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQAD 866
+ ++ +++ + + + + ++ G M+ ++R +
Sbjct: 299 HLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLDAMAKLKHF 358
Query: 867 RVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDV 926
+V+ +T GID V V + VP E Y GRAGR G + Y +
Sbjct: 359 HCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEE 418
Query: 927 RTIQTMIQKDKNLDMI 942
+ I + N++++
Sbjct: 419 ENMMMRIAQKCNINLL 434
>CE03025 [A] KOG0329 ATP-dependent RNA helicase
Length = 425
Score = 51.6 bits (122), Expect = 8e-06
Identities = 52/233 (22%), Positives = 98/233 (41%), Gaps = 14/233 (6%)
Query: 736 DFRPDYKELSFFKQEYPDIPMIALTATASEQVRMDIIHNLQLNNPVFL----KQSFNRTN 791
D R D +E+ + + M + AT +++R +Q V++ K + +
Sbjct: 202 DMRRDVQEIVKMTPQQKQVMMFS--ATLPKELRTVCKRFMQDPMEVYVDDEAKLTLHGLQ 259
Query: 792 LFYQVLKK-EKNSIFQMCDMIRTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAG 850
Y LK+ EKN ++ +++ NQ +I+ + CE L+ + H
Sbjct: 260 QHYVKLKEAEKNR--RLLNLLDALEFNQV-VIFVKAVKRCEALHQLLTEQNFPSIAIHRQ 316
Query: 851 MDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGR 910
M +ER Q ++ + +++ AT FG G+D V VF++ +P + Y RAGR
Sbjct: 317 MAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVARAGR 376
Query: 911 DGNFSQCIMYYSFRDVRTIQTMIQKDKNLDMINKEKHLDKLQQVMQYCDNRTD 963
G I + S + +Q ++ + + +D V Y + RT+
Sbjct: 377 FGTKGLAITFVSDENDAKTLNSVQDRFDISITELPEKID----VSTYIEGRTN 425
>At5g08610 [A] KOG0342 ATP-dependent RNA helicase pitchoune
Length = 827
Score = 51.6 bits (122), Expect = 8e-06
Identities = 76/358 (21%), Positives = 144/358 (39%), Gaps = 46/358 (12%)
Query: 592 GLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAI---VKSGRTSGTT------ 642
G ++ Q + LQGKD TG GK++ + LPAI +KS S +
Sbjct: 378 GFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPII 437
Query: 643 -IVVSP---LISLMQDQVEHLL----AKDIKASMFSSKGTAEQRRMTFNLFMNGLLELVY 694
+VV P L S + LL + ++ + +K EQRRM N +++
Sbjct: 438 VLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQTNP-----CQILV 492
Query: 695 ISPEMIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKEL--SFFKQEYP 752
+P +K ++ + K+ +V+DEA + + G FR D + + + KQ
Sbjct: 493 ATPGRLKDHIENTSGFATRLMGVKV--LVLDEADHLLDMG--FRRDIERIIAAVPKQRQT 548
Query: 753 DIPMIALTATASEQVRMDIIHNLQLNNPVFLK-------QSFNRTNLFYQVLKKEKNSIF 805
+ +AT E+VR I H + F+ ++ + Y + +++ F
Sbjct: 549 FL----FSATVPEEVRQ-ICHVALKRDHEFINCVQEGSGETHQKVTQMYMIASLDRH--F 601
Query: 806 QMCDMIRTKF----KNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQ 861
+ ++ + + II+C + + L+ + + H+ R +V
Sbjct: 602 SLLHVLLKEHIADNVDYKVIIFCTTAMVTRLVADLLSQLSLNVREIHSRKPQSYRTRVSD 661
Query: 862 DWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIM 919
+++ + ++ + G+D PDV V +P E Y GR GR G + ++
Sbjct: 662 EFRKSKAIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVL 719
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.131 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,612,121
Number of Sequences: 60738
Number of extensions: 3152607
Number of successful extensions: 10701
Number of sequences better than 1.0e-05: 112
Number of HSP's better than 0.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 10437
Number of HSP's gapped (non-prelim): 174
length of query: 1367
length of database: 30,389,216
effective HSP length: 119
effective length of query: 1248
effective length of database: 23,161,394
effective search space: 28905419712
effective search space used: 28905419712
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)