ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV3242 good S KOG0290 Function unknown Conserved WD40 repeat-containing protein AN11
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV3242 1091909 1090431 -493
(493 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YPL247c [S] KOG0290 Conserved WD40 repeat-containing protein AN11 330 2e-90
Hs5031729 [S] KOG0290 Conserved WD40 repeat-containing protein AN11 127 3e-29
7295646 [S] KOG0290 Conserved WD40 repeat-containing protein AN11 122 9e-28
SPBC17D11.08 [S] KOG0290 Conserved WD40 repeat-containing protei... 121 2e-27
At5g24520 [S] KOG0290 Conserved WD40 repeat-containing protein AN11 119 8e-27
CE24997 [S] KOG0290 Conserved WD40 repeat-containing protein AN11 115 1e-25
At3g26640 [S] KOG0290 Conserved WD40 repeat-containing protein AN11 107 3e-23
At1g12910 [S] KOG0290 Conserved WD40 repeat-containing protein AN11 102 2e-21
CE10918 [S] KOG0290 Conserved WD40 repeat-containing protein AN11 93 1e-18
Hs13375690 [Z] KOG1445 Tumor-specific antigen (contains WD repeats) 54 7e-07
At2g16780 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 54 7e-07
At4g35050 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 53 9e-07
Hs13899346 [R] KOG0302 Ribosome Assembly protein 52 2e-06
At2g32700 [R] KOG0266 WD40 repeat-containing protein 51 3e-06
>YPL247c [S] KOG0290 Conserved WD40 repeat-containing protein AN11
Length = 523
Score = 330 bits (847), Expect = 2e-90
Identities = 189/461 (40%), Positives = 257/461 (54%), Gaps = 103/461 (22%)
Query: 75 TTCQYQSSAPLFALSWNQNDQCALGTYKEDSYNRIEIINGSNDYSTWECTNVANVVYPIS 134
+ C+YQS PLF L W+ +D LG+YKEDS N++++++ SND +WE A+VVYP+S
Sbjct: 121 SVCEYQSHYPLFGLDWSADDYVCLGSYKEDSRNKLQVLH-SNDLLSWESVVDADVVYPVS 179
Query: 135 RIQWMPQN--NTRLATCSDSLRIWSL---DGSLQEQINLSLYKYGK-HPSS-ASQKDTVT 187
+IQW+P +LATCSDSLRIWS+ + QEQINLSL KY + HP++ A+ D
Sbjct: 180 KIQWVPSQLYPRKLATCSDSLRIWSVSPEERQFQEQINLSLCKYNRQHPANPAAADDMKV 239
Query: 188 LGQLPPVTSFHWSPISPNLLLSCSIDTTCTVWDLSNSTNYVKTQLIAHDSEVFDVKFLAQ 247
+G PP+TSF W+ + NL++S SIDTTC VWDL +S +YVKTQLIAHDSEVFDV+FL +
Sbjct: 240 IGTFPPITSFDWNTVDTNLIISSSIDTTCIVWDLQSS-HYVKTQLIAHDSEVFDVRFLTK 298
Query: 248 STQLFASCGGDGSVRVFDLRSLAHSTIVYDHGNETSRXXXXXXXXXXDGPXXXXXXXXXX 307
STQLFASCGGDGSVRVFDLRSLAHSTI+Y+ + +
Sbjct: 299 STQLFASCGGDGSVRVFDLRSLAHSTIIYEPPSSS------------------------- 333
Query: 308 XXXXXXXXXXXXXXXXXXXXXXXXXXXXLIPHGNSQDTVDQMDPEPHSNALVRLEPNPFD 367
+ P D + +++P +P+D
Sbjct: 334 --------------------VSGATAGTITPSSKGSDALLRLEP------------SPYD 361
Query: 368 PNVIVTVAQDSNAIIVLDMRYPGTPLLTLEGHIGPVNQVQWHPKKSGVLVSCGDDCQVLY 427
PNV+ T A DSN II+LDMR P +P+L L+GH VN ++WHP K VL+SCGDDCQVLY
Sbjct: 362 PNVLATFAADSNKIIILDMRNPESPILNLQGHGSSVNGIKWHPTKRNVLLSCGDDCQVLY 421
Query: 428 WDTSALLGQTSSNTARW-----------------------------------NNQNVVHT 452
WD ++ + ++ ++ N++ V T
Sbjct: 422 WDLNSSFMEINAAGSKSPSIHGTSLEDPDGDTEMTDGGAGSGLNEDPLSLNNNSKQVCKT 481
Query: 453 VDTPQMAYTTET-EANNLVLNPS-GTHVGTVNGKTFTAINL 491
++TP M Y +T E NN+ P G G V+GK F + +
Sbjct: 482 LETPNMMYANKTQEINNIAWRPQRGDWFGCVSGKKFQNVRV 522
>Hs5031729 [S] KOG0290 Conserved WD40 repeat-containing protein AN11
Length = 342
Score = 127 bits (320), Expect = 3e-29
Identities = 74/219 (33%), Positives = 117/219 (52%), Gaps = 32/219 (14%)
Query: 78 QYQSSAPLFALSWN----QNDQCALGTYKEDSYNRIEIINGSNDYSTWECTNVANVVYPI 133
+Y++ ++A++W+ + + ALG++ E+ N+++++ + S + C N + YP
Sbjct: 12 KYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNTFDHPYPT 71
Query: 134 SRIQWMPQNN----TRLATCSDSLRIWSLDGSLQEQINLSLYKYGKHPSSASQKDTVTLG 189
+++ W+P LAT D LR+W + G + ++ L A
Sbjct: 72 TKLMWIPDTKGVYPDLLATSGDYLRVWRV-GETETRLECLLNNNKNSDFCA--------- 121
Query: 190 QLPPVTSFHWSPISPNLLLSCSIDTTCTVWDLSNS---------TNYVKTQLIAHDSEVF 240
P+TSF W+ + P LL + SIDTTCT+W L + +VKTQLIAHD EV+
Sbjct: 122 ---PLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVY 178
Query: 241 DVKF--LAQSTQLFASCGGDGSVRVFDLRSLAHSTIVYD 277
D+ F +FAS G DGSVR+FDLR L HSTI+Y+
Sbjct: 179 DIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYE 217
Score = 72.4 bits (176), Expect = 1e-12
Identities = 42/125 (33%), Positives = 60/125 (47%), Gaps = 18/125 (14%)
Query: 345 TVDQMDPEPHSNALVRLEPNPFDPNVIVTVAQDSNAIIVLDMRYPGTPLLTLEGHIGPVN 404
T+ DP+ H L+RL N DPN + T+A D +++LD+R P TP+ L H VN
Sbjct: 213 TIIYEDPQHHP--LLRLCWNKQDPNYLATMAMDGMEVVILDVRVPCTPVARLNNHRACVN 270
Query: 405 QVQWHPKKSGVLVSCGDDCQVLYWDTSALLGQTSSNTARWNNQNVVHTVDTPQMAYTTET 464
+ W P S + + DD Q L WD Q + ++ P +AYT E
Sbjct: 271 GIAWAPHSSCHICTAADDHQALIWDI----------------QQMPRAIEDPILAYTAEG 314
Query: 465 EANNL 469
E NN+
Sbjct: 315 EINNV 319
>7295646 [S] KOG0290 Conserved WD40 repeat-containing protein AN11
Length = 321
Score = 122 bits (307), Expect = 9e-28
Identities = 74/201 (36%), Positives = 105/201 (51%), Gaps = 27/201 (13%)
Query: 97 ALGTYKEDSYNRIEIINGSNDYSTWECTNVANVVYPISRIQWMPQNN----TRLATCSDS 152
ALG++ E+ N+++II+ D S + + + YP ++I W+P + LAT D
Sbjct: 14 ALGSFIEEYNNKVQIISLDEDTSEFSAKSTFDHPYPTTKIMWIPDSKGVYPDLLATSGDY 73
Query: 153 LRIWSLDGSLQEQINLSLYKYGKHPSSASQKDTVTLGQLPPVTSFHWSPISPNLLLSCSI 212
LR+W G ++ L A P+TSF W+ + PNL+ + SI
Sbjct: 74 LRVWRA-GEPDTRLECVLNNNKNSDFCA------------PLTSFDWNEVDPNLVGTSSI 120
Query: 213 DTTCTVWDLSNS--------TNYVKTQLIAHDSEVFDVKF--LAQSTQLFASCGGDGSVR 262
DTTCT+W L +VKTQLIAHD EV+D+ F +FAS G DGSVR
Sbjct: 121 DTTCTIWGLETGQPHARVYVAGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVR 180
Query: 263 VFDLRSLAHSTIVYDHGNETS 283
+FDLR L HSTI+Y+ T+
Sbjct: 181 MFDLRHLEHSTIIYEDPAHTA 201
Score = 72.8 bits (177), Expect = 1e-12
Identities = 43/119 (36%), Positives = 58/119 (48%), Gaps = 17/119 (14%)
Query: 352 EPHSNALVRLEPNPFDPNVIVTVAQDSNAIIVLDMRYPGTPLLTLEGHIGPVNQVQWHPK 411
+P AL+RL N DPN + TVA DS +I+LD+R P TP+ L H VN + W P
Sbjct: 196 DPAHTALLRLAWNKQDPNYLATVAMDSCEVIILDVRVPCTPVARLSNHRACVNGIAWAPH 255
Query: 412 KSGVLVSCGDDCQVLYWDTSALLGQTSSNTARWNNQNVVHTVDTPQMAYT-TETEANNL 469
S + + GDD Q L WD Q + ++ P +AYT E E N +
Sbjct: 256 SSCHICTAGDDHQALIWDI----------------QQMPRAIEDPILAYTAAEGEVNQI 298
>SPBC17D11.08 [S] KOG0290 Conserved WD40 repeat-containing protein AN11
Length = 435
Score = 121 bits (304), Expect = 2e-27
Identities = 78/207 (37%), Positives = 111/207 (52%), Gaps = 25/207 (12%)
Query: 86 FALSWNQ-----NDQCALGTYKEDSYNRIEI---INGSNDYSTWECTNVA-NVVYPISRI 136
FAL W + ++ A+G+ E+ N I++ I G + S E A ++ YP++++
Sbjct: 54 FALDWLKQGKYSSEWIAMGSLNEEPNNMIQLLKLITGDDGNSHLEKAQAATDLEYPVTKL 113
Query: 137 QWMPQN------NTRLATCSDSLRIWSLDGSLQEQINLSLYKYGKHPSSASQKDTVTLGQ 190
W P + + LA+ LR+W D + I+ L AS V
Sbjct: 114 LWNPSSVGSNTDSQLLASTDQQLRLWKTD--FEAGIDSPLL------CQASLSTHVKTHN 165
Query: 191 LPPVTSFHWSPISPNLLLSCSIDTTCTVWDLSNSTNYVKTQLIAHDSEVFDVKFLAQSTQ 250
P+TSF W P+ ++ S+DTTCTVWD+ + KTQLIAHD EV+DV FL S
Sbjct: 166 NAPLTSFDWCKTDPSYIVVSSLDTTCTVWDIVAQQS--KTQLIAHDKEVYDVAFLKDSIN 223
Query: 251 LFASCGGDGSVRVFDLRSLAHSTIVYD 277
+F S G DGSVR+FDLRSL HSTI+Y+
Sbjct: 224 VFVSVGADGSVRMFDLRSLDHSTIIYE 250
Score = 71.6 bits (174), Expect = 2e-12
Identities = 47/166 (28%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 353 PHSNALVRLEPNPFDPNVIVTVAQDSNAIIVLDMRYPGTPLLTLEGHIGPVNQVQWHPKK 412
P S L+RL D N++ T +S+ + ++D+R PGT TL GH G VN V+W P
Sbjct: 268 PVSAPLLRLSACDSDVNLMATFHHNSSDVQMIDIRVPGTAYATLRGHKGDVNAVKWMPGS 327
Query: 413 SGVLVSCGDDCQVLYWD------------------TSALLGQTSSNTARWNNQNVVHTVD 454
L +CGDDC V WD T + G TS ++ N +
Sbjct: 328 KSKLATCGDDCVVSLWDLDQPVNPSPAPTLSVSGTTPGMTGSTSEYVTPVSSVNSMRETA 387
Query: 455 ---------TPQMAYTTETEANNLVLNPSGTHVGTVNGKTFTAINL 491
+P +++ E E NNL + + V GK+ + +
Sbjct: 388 SPLNADNQYSPLLSWKLEHEVNNLSWSVKNDGLAVVYGKSLEILKV 433
>At5g24520 [S] KOG0290 Conserved WD40 repeat-containing protein AN11
Length = 341
Score = 119 bits (299), Expect = 8e-27
Identities = 78/221 (35%), Positives = 122/221 (54%), Gaps = 32/221 (14%)
Query: 72 KTVTTCQYQSSAPLFALSWNQ-----NDQCALGTYKEDSYNRIEIINGSNDYSTWE-CTN 125
++ T Y S PL+A++++ + A+G++ ED NRI+I++ +D T + N
Sbjct: 11 RSETAVTYDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDSDSMTVKPLPN 70
Query: 126 VA-NVVYPISRIQWMPQNNTR------LATCSDSLRIWSL--DGSLQEQINLSLYKYGKH 176
++ YP +++ + P + R LA+ D LR+W + D S E I++
Sbjct: 71 LSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISVL------- 123
Query: 177 PSSASQKDTVTLGQLPPVTSFHWSPISPNLLLSCSIDTTCTVWDLSNSTNYVKTQLIAHD 236
++ T P+TSF W+ + P L +CSIDTTCT+WD+ S V+TQLIAHD
Sbjct: 124 ------NNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSV--VETQLIAHD 175
Query: 237 SEVFDVKFLAQSTQLFASCGGDGSVRVFDLRSLAHSTIVYD 277
EV D+ + ++FAS DGSVR+FDLR HSTI+Y+
Sbjct: 176 KEVHDIAW--GEARVFASVSADGSVRIFDLRDKEHSTIIYE 214
Score = 62.8 bits (151), Expect = 1e-09
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 345 TVDQMDPEPHSNALVRLEPNPFDPNVIVTVAQDSNAIIVLDMRYPGTPLLTLEGHIGPVN 404
T+ P+P + L+RL N D + T+ DSN +++LD+R P P+ LE H VN
Sbjct: 210 TIIYESPQPDT-PLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHQASVN 268
Query: 405 QVQWHPKKSGVLVSCGDDCQVLYWDTSALLG 435
+ W P+ + S GDD Q L W+ + G
Sbjct: 269 AIAWAPQSCKHICSGGDDTQALIWELPTVAG 299
>CE24997 [S] KOG0290 Conserved WD40 repeat-containing protein AN11
Length = 478
Score = 115 bits (288), Expect = 1e-25
Identities = 75/221 (33%), Positives = 108/221 (47%), Gaps = 34/221 (15%)
Query: 79 YQSSAPLFALSWN------QNDQCALGTYKEDSYNRIEIINGSNDYSTWECTNVANVVYP 132
Y + LF+ W+ + + A+ ++ E+ N+I I+ + + + YP
Sbjct: 145 YNAPFTLFSHGWSAATDPSRKFRLAVSSFIEEYSNKIHIVQLDEEAGELVHRSTFDHPYP 204
Query: 133 ISRIQWMPQNNTR----LATCSDSLRIWSLDGSLQEQINLSLYKYGKHPSSASQKDTVTL 188
++I W+P LAT D LR+W + G+ SL + T
Sbjct: 205 ATKIMWIPDQKGTFPDLLATSGDYLRLWRI-GTDNNACIESLLNTNR-----------TA 252
Query: 189 GQLPPVTSFHWSPISPNLLLSCSIDTTCTVWDLSNST------------NYVKTQLIAHD 236
P+TSF W+ + NL+ + SIDTTCTVW L V+TQLIAHD
Sbjct: 253 EYCAPLTSFDWNELDMNLIGTSSIDTTCTVWQLETGQAIGTTRPTAAIDGTVRTQLIAHD 312
Query: 237 SEVFDVKFLAQSTQLFASCGGDGSVRVFDLRSLAHSTIVYD 277
EVFD+ F S Q+FAS G DGS+R+FDLR L HSTI+Y+
Sbjct: 313 KEVFDISFSRGSAQIFASVGADGSLRLFDLRRLEHSTIMYE 353
Score = 67.4 bits (163), Expect = 5e-11
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 16/121 (13%)
Query: 349 MDPEPHSNALVRLEPNPFDPNVIVTVAQDSNAIIVLDMRYPGTPLLTLEGHIGPVNQVQW 408
M +P L+RL N D N I T QDS +++LD+R P TP+ L H +N + W
Sbjct: 351 MYEDPQRQPLLRLAWNRNDHNYIATFGQDSKEVLILDLRLPCTPVARLRNHEATINGLSW 410
Query: 409 HPKKSGVLVSCGDDCQVLYWDTSALLGQTSSNTARWNNQNVVHTVDTPQMAYTTETEANN 468
P + + GDD Q L WD + ++ P +AY + E N
Sbjct: 411 APHSGSHICTAGDDYQALIWDV----------------HEMPKPINDPILAYRAQAEVNQ 454
Query: 469 L 469
+
Sbjct: 455 I 455
>At3g26640 [S] KOG0290 Conserved WD40 repeat-containing protein AN11
Length = 346
Score = 107 bits (268), Expect = 3e-23
Identities = 73/217 (33%), Positives = 115/217 (52%), Gaps = 29/217 (13%)
Query: 79 YQSSAPLFALSWN----QNDQCALGTYKEDSYNRIEIINGSNDYSTWECTNVANVV---- 130
Y++ ++A++W+ + + A+ + E NR+EI+ D S E + N+
Sbjct: 24 YEAPWQIYAMNWSIRRDKKYRLAITSLIEQYPNRVEIVQ--LDESNGEIRSDPNLCFEHP 81
Query: 131 YPISRIQWMPQNNTR----LATCSDSLRIWSLDGSLQEQINLSLYKYGKHPSSASQKDTV 186
YP ++ ++P + LAT SD LR+W + + ++ L +S K++
Sbjct: 82 YPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDD-ESRVELK-------SCLSSDKNSE 133
Query: 187 TLGQLPPVTSFHWSPISPNLLLSCSIDTTCTVWDLSNSTNYVKTQLIAHDSEVFDVKFLA 246
G P+TSF W+ P + + SIDTTCT+WD+ V TQLIAHD EV+D+ +
Sbjct: 134 FSG---PITSFDWNEAEPRRIGTSSIDTTCTIWDIEREV--VDTQLIAHDKEVYDIAW-- 186
Query: 247 QSTQLFASCGGDGSVRVFDLRSLAHSTIVYDHGNETS 283
+FAS DGSVRVFDLR HSTI+Y+ G ++
Sbjct: 187 GGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPST 223
Score = 72.4 bits (176), Expect = 1e-12
Identities = 43/115 (37%), Positives = 57/115 (49%), Gaps = 13/115 (11%)
Query: 355 SNALVRLEPNPFDPNVIVTVAQDSNAIIVLDMRYPGTPLLTLEGHIGPVNQVQWHPKKSG 414
S LVRL N DP + TV S I+VLD+R+P P++ L+ H VN + W P S
Sbjct: 222 STPLVRLSWNKQDPRYMATVIMGSAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSS 281
Query: 415 VLVSCGDDCQVLYWDTSALLGQTSSNTARWNNQNVVHTVDTPQMAYTTETEANNL 469
+ S GDD Q L WD S++ Q+V +D P +AYT E L
Sbjct: 282 HICSAGDDSQALIWDISSM------------GQHVEGGLD-PILAYTAGAEVEQL 323
>At1g12910 [S] KOG0290 Conserved WD40 repeat-containing protein AN11
Length = 346
Score = 102 bits (253), Expect = 2e-21
Identities = 73/212 (34%), Positives = 111/212 (51%), Gaps = 31/212 (14%)
Query: 79 YQSSAPLFALSWN----QNDQCALGTYKEDSYNRIEIINGSNDYSTWECTNVANVV---- 130
Y++ ++A++W+ + + A+ + E NR+EI+ D S E + N+
Sbjct: 24 YEAPWHIYAMNWSVRRDKKYRLAITSLLEQYPNRVEIVQ--LDESNGEIRSDPNLSFEHP 81
Query: 131 YPISRIQWMPQNNTR----LATCSDSLRIWSL-DGSLQEQINLSLYKYGKHPSSASQKDT 185
YP ++ ++P + LAT SD LR+W + D + ++ L S K++
Sbjct: 82 YPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRVELKSCLN---------SNKNS 132
Query: 186 VTLGQLPPVTSFHWSPISPNLLLSCSIDTTCTVWDLSNSTNYVKTQLIAHDSEVFDVKFL 245
G P+TSF W+ P + + S DTTCT+WD+ V TQLIAHD EVFD+ +
Sbjct: 133 EFCG---PLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREA--VDTQLIAHDKEVFDIAW- 186
Query: 246 AQSTQLFASCGGDGSVRVFDLRSLAHSTIVYD 277
+FAS DGSVRVFDLR HSTI+Y+
Sbjct: 187 -GGVGVFASVSADGSVRVFDLRDKEHSTIIYE 217
Score = 69.7 bits (169), Expect = 9e-12
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 13/112 (11%)
Query: 358 LVRLEPNPFDPNVIVTVAQDSNAIIVLDMRYPGTPLLTLEGHIGPVNQVQWHPKKSGVLV 417
LVRL N DP + T+ DS ++VLD+R+P P++ L+ H VN + W P S +
Sbjct: 225 LVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPALPVVELQRHQASVNAIAWAPHSSCHIC 284
Query: 418 SCGDDCQVLYWDTSALLGQTSSNTARWNNQNVVHTVDTPQMAYTTETEANNL 469
+ GDD Q L WD S++ Q+V +D P +AYT E L
Sbjct: 285 TAGDDSQALIWDISSM------------GQHVEGGLD-PILAYTAGAEIEQL 323
>CE10918 [S] KOG0290 Conserved WD40 repeat-containing protein AN11
Length = 388
Score = 92.8 bits (229), Expect = 1e-18
Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 46/233 (19%)
Query: 78 QYQSSAPLFALSW-NQND---QCALGTYKEDSYN-----RIEIINGSNDYSTWECTNVAN 128
++ S L+A +W N+ND + A+GT + S N ++ I+ ++ T
Sbjct: 52 KFTSDQQLYASAWSNKNDIKFRLAVGTVSDVSVNPCAANKVSIVQLKDETGELVETASFP 111
Query: 129 VVYPISRIQWMPQNNT----RLATCSDSLRIWSL-DGSLQEQ---INLSLYKYGKHPSSA 180
+ +P + + ++P + +AT SD LR+W + DG + IN + +YG
Sbjct: 112 MEFPANAVGFIPDPDNVYPDLIATTSDCLRLWRVVDGKVHPDAVMINNTNSQYGS----- 166
Query: 181 SQKDTVTLGQLPPVTSFHWSPISPNLLLSCSIDTTCTVWDLS----------NSTNYVKT 230
+TSF W+ + P + S+DTTCT++D+ + +KT
Sbjct: 167 ------------ALTSFDWNELEPRYIGVSSVDTTCTIYDVEVGCAIGQTKPTAPFTLKT 214
Query: 231 QLIAHDSEVFDVKF--LAQSTQLFASCGGDGSVRVFDLRSLAHSTIVYDHGNE 281
QLIAHD V D++F + FA+ G DGS R+FDLR L HSTIVY+ N+
Sbjct: 215 QLIAHDKPVHDIEFAKINGGRDHFATVGADGSARMFDLRHLNHSTIVYEDPNK 267
Score = 65.1 bits (157), Expect = 2e-10
Identities = 38/122 (31%), Positives = 53/122 (43%), Gaps = 16/122 (13%)
Query: 352 EPHSNALVRLEPNPFDPNVIVTVAQDSNAIIVLDMRYPGTPLLTLEGHIGPVNQVQWHPK 411
+P+ L RL N +P + A++S + +LD+R P L L H GPVN + W P
Sbjct: 264 DPNKEKLQRLSWNKQEPYFMALFAENSQEVQILDIRMPCNILCRLRNHTGPVNGIAWAPH 323
Query: 412 KSGVLVSCGDDCQVLYWDTSALLGQTSSNTARWNNQNVVHTVDTPQMAYTTETEANNLVL 471
+ + GDD Q L WD Q V VD P +AY+ E N +
Sbjct: 324 SPHHICTAGDDSQALIWDL----------------QQVPRPVDDPILAYSAGGEVNQIHW 367
Query: 472 NP 473
P
Sbjct: 368 GP 369
>Hs13375690 [Z] KOG1445 Tumor-specific antigen (contains WD repeats)
Length = 925
Score = 53.5 bits (127), Expect = 7e-07
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 18/138 (13%)
Query: 133 ISRIQWMPQNNTRLATCSDS--LRIWSLDGSLQEQINLSLYKYGKHPSSASQKDTVTLGQ 190
++ + W P + RLA + +R+W + E++ + +TV G
Sbjct: 547 VTDLAWDPFDPHRLAVAGEDARIRLWRVPAEGLEEV-------------LTTPETVLTGH 593
Query: 191 LPPVTSFHWSPISPNLLLSCSIDTTCTVWDLSNSTNYVKTQLIAHDSEVFDVKFLAQSTQ 250
+ S + P++ N+L S S D T +WDL + +K Q H ++F + + Q
Sbjct: 594 TEKICSLRFHPLAANVLASSSYDLTVRIWDLQAGADRLKLQ--GHQDQIFSLAWSPDGQQ 651
Query: 251 LFASCGGDGSVRVFDLRS 268
L C DG VRV+ RS
Sbjct: 652 LATVC-KDGRVRVYRPRS 668
>At2g16780 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 415
Score = 53.5 bits (127), Expect = 7e-07
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 354 HSNALVRLEPNPFDPNVIVTVAQDSNAIIVLDMRYPGTPLLTLEGHIGPVNQVQWHPKKS 413
H + L NPF+ V+ T + DS + + D+R PL + H G V QV+W P
Sbjct: 259 HEREVNYLSFNPFNEWVLATASSDST-VALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHE 317
Query: 414 GVLVSCGDDCQVLYWD 429
VL S G+D +++ WD
Sbjct: 318 TVLASSGEDRRLMVWD 333
>At4g35050 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 424
Score = 53.1 bits (126), Expect = 9e-07
Identities = 28/76 (36%), Positives = 40/76 (51%), Gaps = 1/76 (1%)
Query: 354 HSNALVRLEPNPFDPNVIVTVAQDSNAIIVLDMRYPGTPLLTLEGHIGPVNQVQWHPKKS 413
H + L NPF+ V+ T + DS + + D+R PL L H G V QV+W P
Sbjct: 260 HEREINYLSFNPFNEWVLATASSDST-VALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHE 318
Query: 414 GVLVSCGDDCQVLYWD 429
VL S G+D +++ WD
Sbjct: 319 TVLASSGEDRRLMVWD 334
>Hs13899346 [R] KOG0302 Ribosome Assembly protein
Length = 446
Score = 52.4 bits (124), Expect = 2e-06
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 377 DSNAIIVLDMRY--PGTPLLTLEGHIGPVNQVQWHPKKSGVLVSCGDDCQVLYWD 429
D A+ + D+R G+P+ T + H+ PV V+WHP+ SGV + G D Q+ WD
Sbjct: 328 DDGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADHQITQWD 382
>At2g32700 [R] KOG0266 WD40 repeat-containing protein
Length = 787
Score = 51.2 bits (121), Expect = 3e-06
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 351 PEPHSNAL--VRLEPNPFDPNVIVTVAQDSNAIIVLDMRYPGTPLLTLEGHIGPVNQVQW 408
PE H++ + VR PN + + + I + D PG L T+ GH PV + +
Sbjct: 548 PEEHAHIITDVRFRPN----STQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDF 603
Query: 409 HPKKSGVLVSCGDDCQVLYWDTSA 432
HPKK+ +L SC + + +WD +A
Sbjct: 604 HPKKTELLCSCDSNNDIRFWDINA 627
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.130 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,809,578
Number of Sequences: 60738
Number of extensions: 1007280
Number of successful extensions: 4266
Number of sequences better than 1.0e-05: 14
Number of HSP's better than 0.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 4152
Number of HSP's gapped (non-prelim): 78
length of query: 493
length of database: 30,389,216
effective HSP length: 110
effective length of query: 383
effective length of database: 23,708,036
effective search space: 9080177788
effective search space used: 9080177788
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)