ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIV3561   suspect: LH   K     KOG0837  Transcription                                                  Transcriptional activator of the JUN family

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIV3561 1209913  1210911 333  
         (333 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YEL009c [K] KOG0837 Transcriptional activator of the JUN family       195   9e-50

>YEL009c [K] KOG0837 Transcriptional activator of the JUN family
          Length = 281

 Score =  195 bits (495), Expect = 9e-50
 Identities = 127/281 (45%), Positives = 171/281 (60%), Gaps = 39/281 (13%)

Query: 53  MGELIFDKFINHAVEHPHLQQSVSNGSPSGGDADDISPKLFNMNSADPTITSNEISTTEL 112
           +G+LIFDKFI    E P ++Q     +PS  D D   P+     +A        +   EL
Sbjct: 40  VGQLIFDKFIK-TEEDPIIKQD----TPSNLDFDFALPQ-----TATAPDAKTVLPIPEL 89

Query: 113 NASIVETFFDAASSTDSTPIFELDNQDLGGVETWTSLFDNDIPVTLEDVSDCANAVTLEL 172
           + ++VE+FF  +SSTDSTP+FE +N +    E WTSLFDNDIPVT +DVS    A+    
Sbjct: 90  DDAVVESFF--SSSTDSTPMFEYENLEDNSKE-WTSLFDNDIPVTTDDVSLADKAI---- 142

Query: 173 ESTHNVSVQHPSVVDDLVAPPTNTMALKQNQFLPTPMLEDDLQLPSKPKFSKASGRVSKP 232
           EST  VS+            P+N + +    FLPTP+LED  +L    K  K +  V K 
Sbjct: 143 ESTEEVSLV-----------PSN-LEVSTTSFLPTPVLED-AKLTQTRKVKKPNSVVKK- 188

Query: 233 TKCENLTRSPSPSETESNKYDNLGVIAYSRKQRAAPLTPVIPESDDPMAVKRAKNTEAAR 292
                   S    + + ++ D+LGV+AY+RKQR+ PL+P++PES DP A+KRA+NTEAAR
Sbjct: 189 --------SHHVGKDDESRLDHLGVVAYNRKQRSIPLSPIVPESSDPAALKRARNTEAAR 240

Query: 293 RSRARKLQRMNQLEDKVKELLQRNSDLENEVTRLRSMLGSQ 333
           RSRARKLQRM QLEDKV+ELL +N  LENEV RL+ ++G +
Sbjct: 241 RSRARKLQRMKQLEDKVEELLSKNYHLENEVARLKKLVGER 281


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.309    0.126    0.345 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,801,008
Number of Sequences: 60738
Number of extensions: 825895
Number of successful extensions: 2903
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2898
Number of HSP's gapped (non-prelim): 1
length of query: 333
length of database: 30,389,216
effective HSP length: 107
effective length of query: 226
effective length of database: 23,890,250
effective search space: 5399196500
effective search space used: 5399196500
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)