ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIV3568   good          O     KOG4146  Posttranslational modification, protein turnover, chaperones   Ubiquitin-like protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIV3568 1212438 1212136 -101 
         (101 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YIL008w [O] KOG4146 Ubiquitin-like protein                            139   9e-34
Hs13569870 [O] KOG4146 Ubiquitin-like protein                          82   1e-16
SPCC548.04 [O] KOG4146 Ubiquitin-like protein                          80   6e-16

>YIL008w [O] KOG4146 Ubiquitin-like protein
          Length = 99

 Score =  139 bits (349), Expect = 9e-34
 Identities = 65/101 (64%), Positives = 83/101 (81%), Gaps = 2/101 (1%)

Query: 1   MVRVIIEFLGGLDVIVKKQRQYKVDVQLDGKDEINVGDLIQWIVDNLIEHEGDVNVFLEN 60
           MV V +EFLGGLD I  KQR +K+  ++D +D + VGDLI  IV  +I +  DV++F+E+
Sbjct: 1   MVNVKVEFLGGLDAIFGKQRVHKI--KMDKEDPVTVGDLIDHIVSTMINNPNDVSIFIED 58

Query: 61  DSIRPGILTLINDTDWELEGEKEYVLEDGDVVSFTSTLHGG 101
           DSIRPGI+TLINDTDWELEGEK+Y+LEDGD++SFTSTLHGG
Sbjct: 59  DSIRPGIITLINDTDWELEGEKDYILEDGDIISFTSTLHGG 99


>Hs13569870 [O] KOG4146 Ubiquitin-like protein
          Length = 101

 Score = 82.0 bits (201), Expect = 1e-16
 Identities = 47/102 (46%), Positives = 67/102 (65%), Gaps = 11/102 (10%)

Query: 4   VIIEFLGGLDVI---VKKQRQYKVDVQLDGKDEI-NVGDLIQWIVDNLIEHEGDVNVFLE 59
           V +EF GG +++   +KK R     V L G++E  ++ +L+ WI  NL++   ++  F++
Sbjct: 7   VEVEFGGGAELLFDGIKKHR-----VTLPGQEEPWDIRNLLIWIKKNLLKERPEL--FIQ 59

Query: 60  NDSIRPGILTLINDTDWELEGEKEYVLEDGDVVSFTSTLHGG 101
            DS+RPGIL LIND DWEL GE +Y L+D D V F STLHGG
Sbjct: 60  GDSVRPGILVLINDADWELLGELDYQLQDQDSVLFISTLHGG 101


>SPCC548.04 [O] KOG4146 Ubiquitin-like protein
          Length = 113

 Score = 79.7 bits (195), Expect = 6e-16
 Identities = 40/95 (42%), Positives = 60/95 (63%), Gaps = 3/95 (3%)

Query: 6   IEFLGGLDVIVKKQRQYKVDVQLDGKDEINVGDLIQWIVDNLIEHEGDVNVFLENDSIRP 65
           +E LGGLD++  KQ+   + + L       +G LI ++   +IE     ++F+ N ++RP
Sbjct: 5   VELLGGLDLLFNKQKA--LSLSLSNLGSTKLGSLIDYMAQ-IIEKPSQKDLFILNGTVRP 61

Query: 66  GILTLINDTDWELEGEKEYVLEDGDVVSFTSTLHG 100
           GI+ L+ND DWEL  ++EY LE+GD V F STLHG
Sbjct: 62  GIIVLVNDQDWELLEKEEYNLEEGDEVVFVSTLHG 96


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.318    0.144    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,408,114
Number of Sequences: 60738
Number of extensions: 267730
Number of successful extensions: 672
Number of sequences better than 1.0e-05: 3
Number of HSP's better than  0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 667
Number of HSP's gapped (non-prelim): 3
length of query: 101
length of database: 30,389,216
effective HSP length: 77
effective length of query: 24
effective length of database: 25,712,390
effective search space: 617097360
effective search space used: 617097360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)