ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV3714 good A KOG2574 RNA processing and modification mRNA splicing factor PRP31
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV3714 1254381 1255781 467
(467 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGR091w [A] KOG2574 mRNA splicing factor PRP31 269 8e-72
Hs7661654 [A] KOG2574 mRNA splicing factor PRP31 191 3e-48
At1g60170 [A] KOG2574 mRNA splicing factor PRP31 175 1e-43
SPBC119.13c [A] KOG2574 mRNA splicing factor PRP31 169 6e-42
7294306 [A] KOG2574 mRNA splicing factor PRP31 169 6e-42
CE24126 [A] KOG2574 mRNA splicing factor PRP31 162 8e-40
At3g60610 [A] KOG2574 mRNA splicing factor PRP31 140 4e-33
At5g27140 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p 81 4e-15
At3g05060 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p 75 2e-13
CE18307 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p 75 2e-13
CE06114 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p 73 8e-13
SPAC23G3.06 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p 72 1e-12
At5g27120 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p 72 1e-12
ECU09g1600 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p 71 3e-12
ECU04g0820 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p 70 5e-12
7300850 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p 69 1e-11
At1g56110 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p 69 2e-11
At3g12860 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p 67 4e-11
YOR310c [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p 65 2e-10
Hs7706254 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p 63 8e-10
7297189 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p 61 3e-09
Hs5453794_1 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p 60 9e-09
SPBC646.10c [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p 59 2e-08
>YGR091w [A] KOG2574 mRNA splicing factor PRP31
Length = 494
Score = 269 bits (687), Expect = 8e-72
Identities = 145/368 (39%), Positives = 231/368 (62%), Gaps = 33/368 (8%)
Query: 94 QLMPLFDTELSMVFQCIVDTYKAKFPGLETIVPERKQYVDVVKMLQ-QDIPNVQLDQV-- 150
+++PL + + ++ ++ Y +FP L +++P QY V+ +L+ ++ + D++
Sbjct: 100 EIIPLIKSNIKLMHNFLISLYSRRFPELSSLIPSPLQYSKVISILENENYSKNESDELFF 159
Query: 151 -------LSKEETLVVSMSLKTDFKEGARIDKDLLSKAIHWFDILYNL---RDNVSHYVE 200
L++E+ LV++MS+KT FK +D ++ + IL NL ++++ Y+
Sbjct: 160 HLENKAKLTREQILVLTMSMKTSFKNKEPLDIKTRTQILEANSILENLWKLQEDIGQYIA 219
Query: 201 TRIQMVAPNLCALLGPDTAAKLVTHCGSVKELSVVPSCNLASIGQDKTL-HGKSLDISGV 259
++I ++APN+C L+GP+ AA+L+ H G V E S +PSCN+ASIG++K L H SGV
Sbjct: 220 SKISIIAPNVCFLVGPEIAAQLIAHAGGVLEFSRIPSCNIASIGKNKHLSHELHTLESGV 279
Query: 260 RQKGYLFYTDVVQTQPPEFQKQALRMVSAKVALAARADCTMGNQVINPDGNSDGNSDASK 319
RQ+GYLF +D++Q P KQ LRM+ AKV+LAAR D G +G+ + +
Sbjct: 280 RQEGYLFASDMIQKFPVSVHKQMLRMLCAKVSLAARVDA----------GQKNGDRN-TV 328
Query: 320 LGLKWRHEIVEKLKKIIDPPNISNIKPLPIPEDAPKKKRAGRRFRKYKEQFKMSHLRQMQ 379
L KW+ E+ +K +K+ + P+IS K LPIPED PKKKRAGR+FRKYKE+F++SH+RQ+Q
Sbjct: 329 LAHKWKAELSKKARKLSEAPSISETKALPIPEDQPKKKRAGRKFRKYKEKFRLSHVRQLQ 388
Query: 380 NRMEFGKEEQTTMDPYGEEIGFGMADSKNVSAL--------SSFNKTKMRKSMRLRLDQE 431
NRMEFGK+EQT +D YGEE+G GM+++ A+ S+ N+ K+ K M+ R+ +
Sbjct: 389 NRMEFGKQEQTVLDSYGEEVGLGMSNTSLQQAVGATSGSRRSAGNQAKLTKVMKHRISEA 448
Query: 432 TKNTHSFL 439
+ FL
Sbjct: 449 NQQADEFL 456
>Hs7661654 [A] KOG2574 mRNA splicing factor PRP31
Length = 499
Score = 191 bits (484), Expect = 3e-48
Identities = 121/377 (32%), Positives = 199/377 (52%), Gaps = 41/377 (10%)
Query: 67 IQLAKHETIIRDATNHTTEPYNVIKLGQLMPLFDTELSMVFQCIVDTYKAKFPGLETIVP 126
++ A +I DA N T E + EL+++ + I D Y +FP LE++VP
Sbjct: 84 VEAAPEYRVIVDANNLTVE-------------IENELNIIHKFIRDKYSKRFPELESLVP 130
Query: 127 ERKQYVDVVKMLQQDIP----NVQLDQVLSKEETLVVSMSLKTDFKEGARIDKDLLSKAI 182
Y+ VK L + N L Q+L+ +VVS++ T +G ++ ++ L +
Sbjct: 131 NALDYIRTVKELGNSLDKCKNNENLQQILTNATIMVVSVTASTT--QGQQLSEEELERLE 188
Query: 183 HWFDILYNL---RDNVSHYVETRIQMVAPNLCALLGPDTAAKLVTHCGSVKELSVVPSCN 239
D+ L + + YVE+R+ +APNL ++G TAAK++ G + LS VP+CN
Sbjct: 189 EACDMALELNASKHRIYEYVESRMSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKVPACN 248
Query: 240 LASIG-QDKTLHGKSLDISGVRQKGYLFYTDVVQTQPPEFQKQALRMVSAKVALAARADC 298
+ +G Q KTL G S S + GY++++D+VQ+ PP+ +++A R+V+AK LAAR D
Sbjct: 249 IMLLGAQRKTLSGFS-STSVLPHTGYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVD- 306
Query: 299 TMGNQVINPDGNSDGNSDASKLGLKWRHEIVEKLKKIIDPPNISNIKPLPIPEDAPKKKR 358
S S K+G + + EI K K +PP + +KPLP P D +KKR
Sbjct: 307 ------------SFHESTEGKVGYELKDEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKR 354
Query: 359 AGRRFRKYKEQFKMSHLRQMQNRMEFGKEEQTTMDPYGEEIGFGMADSKNVSALSSFNKT 418
GRR+RK KE+ ++ +R+ NRM FG+ E+ D Y E++GF + S +T
Sbjct: 355 GGRRYRKMKERLGLTEIRKQANRMSFGEIEE---DAYQEDLGFSLG-HLGKSGSGRVRQT 410
Query: 419 KMRKSMRLRLDQETKNT 435
++ ++ + R+ + + T
Sbjct: 411 QVNEATKARISKTLQRT 427
>At1g60170 [A] KOG2574 mRNA splicing factor PRP31
Length = 511
Score = 175 bits (443), Expect = 1e-43
Identities = 136/435 (31%), Positives = 221/435 (50%), Gaps = 35/435 (8%)
Query: 4 LDDEDYGSVSDEESLDDGLSGVTSGITSGIATESDILPSPSVSNLISDFHAQFWHQGADL 63
LD+ D +EE +D ++ + + + S + S ++++ G D
Sbjct: 48 LDENDGDVGKEEEDVDMDMADLETLNYDDLDNVSKLQKSQRYADIMHKVEEAL---GKDS 104
Query: 64 DDLIQLAKHETIIRDATNHTTEPYNVIKLGQLMPLFDTELSMVFQCIVDTYKAKFPGLET 123
D A+ T++ D + ++ QL + E+ +V I D YK KF LE+
Sbjct: 105 DG----AEKGTVLEDDPEYKL----IVDCNQLSVDIENEIVIVHNFIKDKYKLKFQELES 156
Query: 124 IVPERKQYVDVVKML--QQDIPNVQLDQVLSKEETLVVSMSLKTDFKEGARIDKDLLSKA 181
+V Y VVK + + D+ V L +L +VVS++ T +G+ + +D+L K
Sbjct: 157 LVHHPIDYACVVKKIGNETDLALVDLADLLPSAIIMVVSVTALTT--KGSALPEDVLQKV 214
Query: 182 IHWFDILYNL---RDNVSHYVETRIQMVAPNLCALLGPDTAAKLVTHCGSVKELSVVPSC 238
+ D +L R V +VE+++ +APNL A++G AAKL+ G + L+ +P+C
Sbjct: 215 LEACDRALDLDSARKKVLEFVESKMGSIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPAC 274
Query: 239 NLASIGQD-KTLHGKSLDISGVRQKGYLFYTDVVQTQPPEFQKQALRMVSAKVALAARAD 297
N+ +G K L G S S R GYL T++ Q+ PP Q +A R+V+AK LAAR D
Sbjct: 275 NVQVLGHKRKNLAGFSSATSQSRV-GYLEQTEIYQSTPPGLQARAGRLVAAKSTLAARVD 333
Query: 298 CTMGNQVINPDGNSDGNSDASKLGLKWRHEIVEKLKKIIDPPNISNIKPLPIPEDAPKKK 357
T G+ P G S G +R EI +K++K +PP KPLP+P+ PKK+
Sbjct: 334 ATRGD----PLGIS---------GKAFREEIRKKIEKWQEPPPARQPKPLPVPDSEPKKR 380
Query: 358 RAGRRFRKYKEQFKMSHLRQMQNRMEFGKEEQTTM-DPYGEEIG-FGMADSKNVSALSSF 415
R GRR RK KE+++++ +R++ NRM FG E++++ D GE G G A S + S
Sbjct: 381 RGGRRLRKMKERYQVTDMRKLANRMAFGTPEESSLGDGLGEGYGMLGQAGSNRLRVSSVP 440
Query: 416 NKTKMRKSMRLRLDQ 430
+K K+ + +L +
Sbjct: 441 SKLKINAKVAKKLKE 455
>SPBC119.13c [A] KOG2574 mRNA splicing factor PRP31
Length = 518
Score = 169 bits (429), Expect = 6e-42
Identities = 119/418 (28%), Positives = 208/418 (49%), Gaps = 40/418 (9%)
Query: 27 SGITSGIATESDILP-SPSVSNLISDFHAQFWHQGADLDDLIQLAKHETIIRDATNHT-- 83
+GI++ + + DI S S L S+ +F ++ L+ + II +
Sbjct: 43 NGISAELENDLDITKISDSAQKLPSEVANKFNDNNENIYQLLNSTRLRDIIEGTEKYKGT 102
Query: 84 ------------TEPYNVIKLGQLMPLFDTELSMVFQCIVDTYKAKFPGLETIVPERKQY 131
E + ++ + D E+ + + + + Y +FP L ++V Y
Sbjct: 103 EKQAITGNIEDDLEYHLIVDSNSIAMEIDDEILRLHRLVKEWYHDRFPELSSLVLNAFDY 162
Query: 132 VDVVKMLQQDIPNVQLDQVLSKEETLVVSMSLKTDFKEGARIDKDLLSKAIHWFDILYNL 191
V L D+ N + T++V + T G + +++ + + + L
Sbjct: 163 CKTVSSLLNDLDNSKTKLSFLPSATVMVIATTATT-TVGKPLPDEMIKNVKNCCEAIQQL 221
Query: 192 ---RDNVSHYVETRIQMVAPNLCALLGPDTAAKLVTHCGSVKELSVVPSCNLASIGQDK- 247
+ + YV++RI +VAPNL A++G TAA L+ G + L P+CNL ++G+ +
Sbjct: 222 GEEKQKIIEYVQSRISVVAPNLSAVVGSTTAANLIGIAGGLTRLGKFPACNLPALGKRRL 281
Query: 248 -TLHGKSLDISGVRQKGYLFYTDVVQTQPPEFQKQALRMVSAKVALAARADCTMGNQVIN 306
T+ + +SG G+L+ +++VQ PP+ +KQA+RM +AKVALAAR D
Sbjct: 282 TTIGINNPAVSG--DYGFLYMSEIVQKTPPDVRKQAIRMTAAKVALAARIDSIHEY---- 335
Query: 307 PDGNSDGNSDASKLGLKWRHEIVEKLKKIIDPPNISNIKPLPIPEDAPKKKRAGRRFRKY 366
PDG+ G+ R E+ K++K+++PP+ LP+P+D PK++R GRR RK
Sbjct: 336 PDGS---------FGISARKEVERKIEKLLEPPSQKPTVALPVPDDRPKRRRGGRRIRKM 386
Query: 367 KEQFKMSHLRQMQNRMEFGKEEQTTMDPYGEEIGFGMADSK---NVSALSSFNKTKMR 421
KEQ+ ++ LR++QNR+ FGKEE + + E G GM + + A+S ++TK+R
Sbjct: 387 KEQYAVTELRRLQNRVAFGKEEAEVFN-FDETEGLGMLGQEGEGKIRAVSIDSRTKLR 443
>7294306 [A] KOG2574 mRNA splicing factor PRP31
Length = 501
Score = 169 bits (429), Expect = 6e-42
Identities = 108/350 (30%), Positives = 188/350 (52%), Gaps = 32/350 (9%)
Query: 100 DTELSMVFQCIVDTYKAKFPGLETIVPERKQYVDVVKMLQQDIPNVQ----LDQVLSKEE 155
D E+S+V + + Y+ +FP L++++ +Y+ VK L D+ V+ L +L++
Sbjct: 112 DNEISIVHKFTKEKYQKRFPELDSLIVGEIEYLLAVKELGNDLDQVKNNEKLQAILTQAT 171
Query: 156 TLVVSMSLKTDFKEGARI---DKDLLSKAIHWFDILYNLRDNVSHYVETRIQMVAPNLCA 212
++VS++ T +G + +K + +A L N + + YVE+R+ +APNL
Sbjct: 172 IMIVSVTASTT--QGTMLTPAEKAKIDEACEMAIELNNFKSKIYEYVESRMTFIAPNLSM 229
Query: 213 LLGPDTAAKLVTHCGSVKELSVVPSCNLASIG-QDKTLHGKSLDISGVRQKGYLFYTDVV 271
++G TAAKL+ G + +LS +P+CN+ +G Q KTL G S + GY++Y+ +V
Sbjct: 230 IVGASTAAKLLGIAGGLSKLSKMPACNVQVLGAQKKTLSGFS-QTQMLPHTGYVYYSQIV 288
Query: 272 QTQPPEFQKQALRMVSAKVALAARADCTMGNQVINPDGNSDGNSDASKLGLKWRHEIVEK 331
Q P+ +++A R+V+AK LAAR D S ++GL+++ ++ +K
Sbjct: 289 QDTAPDLRRKAARLVAAKSVLAARVDACH-------------ESVHGEIGLRFKEDVEKK 335
Query: 332 LKKIIDPPNISNIKPLPIPEDAPKKKRAGRRFRKYKEQFKMSHLRQMQNRMEFGKEEQTT 391
L K+ +PP + IKPLP P + KKKR G+R RK KE++ ++ R+ NRM FG E+
Sbjct: 336 LDKLQEPPPVKFIKPLPKPIEGSKKKRGGKRVRKMKERYALTEFRKQANRMNFGDIEE-- 393
Query: 392 MDPYGEEIGF-----GMADSKNVSALSSFNKTKMRKSMRLRLDQETKNTH 436
D Y ++G+ G + + KTK+R S L + + + +
Sbjct: 394 -DAYQGDLGYSRGTIGKTGTGRIRLPQVDEKTKVRISKTLHKNLQKQQVY 442
>CE24126 [A] KOG2574 mRNA splicing factor PRP31
Length = 504
Score = 162 bits (411), Expect = 8e-40
Identities = 116/387 (29%), Positives = 196/387 (49%), Gaps = 41/387 (10%)
Query: 89 VIKLGQLMPLFDTELSMVFQCIVDTYKAKFPGLETIVPERKQYVDVVKMLQQDIPNV--- 145
++KL + D E++++ + + D Y+ +FP LET+VP Y+ V++L +I +
Sbjct: 102 IVKLSHVAADIDNEINVIHKFVRDKYEKRFPELETLVPNALTYLATVQLLGNEINSKVVK 161
Query: 146 -QLDQVLSKEETLVVSMSLKTDFKEGARIDKDLLSKAIHWFDILYNLRDN---VSHYVET 201
QL +L +VVS+++ T +G +++ + L + ++ L N + VE
Sbjct: 162 EQLGGILDASTCMVVSVTVSTT--QGVKLEPNELETVMDACNLAAQLHVNRLEMHQLVEW 219
Query: 202 RIQMVAPNLCALLGPDTAAKLVTHCGSVKELSVVPSCNLASIGQDK-TLHGKSLDISGVR 260
R+ ++APNL ALLG T A LV+ G + L+ +PSCN+ +G+ K L G S +S
Sbjct: 220 RMALIAPNLVALLGSTTTAHLVSQAGGLSPLATMPSCNVQVLGKTKKNLIGFST-VSTNP 278
Query: 261 QKGYLFYTDVVQTQPPEFQKQALRMVSAKVALAARADCTMGNQVINPDGNSDGNSDASKL 320
G++++ +VQ PP+ + +A ++++AKV L AR D +S+G A L
Sbjct: 279 HHGFIYFHQLVQKMPPDLKNKAAKILAAKVTLVARIDAQ--------HESSNGEKGAEFL 330
Query: 321 GLKWRHEIVEKLKKIIDPPNISNIKPLPIPEDAPKKKRAGRRFRKYKEQFKMSHLRQMQN 380
L + K +K+++PP + K LP P D KKR GRR RK KE+ M+ LR+ N
Sbjct: 331 AL-----VESKFEKMLEPPPVKANKALPKPLDKASKKRGGRRTRKMKERLGMTDLRKSAN 385
Query: 381 RMEFGKEEQTTMDPYGEEIGFGMADSKNVSALSSFNKTKMRKSMRLRLDQETKNTHSFLQ 440
RM FG+ + M E +GF + K + +T +DQ+T+
Sbjct: 386 RMNFGELGEDVMQ---EHMGFDIGQVKTGNVTGGRIRT-------AAVDQKTR------- 428
Query: 441 DERSEKLKRSAEHPQATDPATSKQPRL 467
S+K+ R E +A TS + ++
Sbjct: 429 ARMSQKMMRQMERQKAAGGMTSIRSKM 455
>At3g60610 [A] KOG2574 mRNA splicing factor PRP31
Length = 442
Score = 140 bits (353), Expect = 4e-33
Identities = 111/371 (29%), Positives = 183/371 (48%), Gaps = 47/371 (12%)
Query: 64 DDLIQLAKHETIIRDATNHTTEPYNVIKLGQLMPLFDTELSMVFQCIVDTYKAKFPGLET 123
DD++ + E + +D+ +H E ++ +L + E+ +V I + YK +F LE+
Sbjct: 64 DDIMHKVE-EALGKDSDDH--EYKLIVDCNKLSVDIEDEIVIVHNFIKEKYKLRFQELES 120
Query: 124 IVPERKQYVDVVKMLQQDIPNVQLDQV-LSKEETLVVSMSLKTDFKEGARIDKDLLSKAI 182
+V Y VVK + + +D L +++++S+ +G+ + +D+ S
Sbjct: 121 LVHHPIDYACVVKKIGNETDLTLVDFAGLDLTPAIIMAISVTASTTKGSALPEDMGS--- 177
Query: 183 HWFDILYNLRDNVSHYVETRIQMVAPNLCALLGPDTAAKLVTHCGSVKELSVVPSCNLAS 242
+APNL A++G AAKL+ G + L+ +P+CN+
Sbjct: 178 -----------------------IAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQV 214
Query: 243 IGQD-KTLHGKSLDISGVRQKGYLFYTDVVQTQPPEFQKQALRMVSAKVALAARADCTMG 301
+G K L G S S R GYL T++ Q+ PP + +A R+V+AK LAAR D T
Sbjct: 215 LGHKRKNLVGFSSATSQSRV-GYLEQTEIFQSTPPGLEARAGRLVAAKSTLAARVDATRE 273
Query: 302 NQVINPDGNSDGNSDASKLGLKWRHEIVEKLKKIIDPPNISNIKPLPIPEDAPKKKRAGR 361
+ P G S G +R EI +K+ K +PP KPLPIP PKK+R GR
Sbjct: 274 D----PLGIS---------GKAFREEIRKKIDKWQEPPPARQPKPLPIPHSEPKKRRGGR 320
Query: 362 RFRKYKEQFKMSHLRQMQNRMEFGKEEQTTM-DPYGEEIG-FGMADSKNVSALSSFNKTK 419
R RK K +++++ +R++ NR FG E++++ D GE G G A SK + S +K K
Sbjct: 321 RLRKLKARYQVTDMRKLANRTAFGTPEESSLGDGLGEGYGMLGQAGSKRLRVSSVQSKLK 380
Query: 420 MRKSMRLRLDQ 430
+ + +L +
Sbjct: 381 INAKVAKKLKE 391
>At5g27140 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p
Length = 445
Score = 80.9 bits (198), Expect = 4e-15
Identities = 87/383 (22%), Positives = 162/383 (41%), Gaps = 50/383 (13%)
Query: 15 EESLDDG-LSGVTSGITSGIATES---DILPSPSVSNLISDFHAQFWHQGADLDDL---- 66
+ + DDG + V I TE + + + +V L+ +Q + LDD
Sbjct: 48 KNNCDDGEILAVADPKLGDIITEKLDIECVHNDAVMELLRGVRSQLTELLSGLDDNDLAP 107
Query: 67 IQLAKHETIIRDATNHTTEPYNVIKLGQLMPLFDTELSMVFQCIVDTYKAKFPGLETIVP 126
+ L + R T++ +I L+ D EL+ + + Y FP L IV
Sbjct: 108 VSLELSHILARYKLKITSDKTMIILSISLLDDLDKELNTYTTSVCELYGLHFPELANIVQ 167
Query: 127 ERKQYVDVVKMLQQDIPNVQLD--QVLSKEETLVVSMSLKTDFKEGARI-------DKDL 177
+ Y VVK++ I LD ++L+ E ++ + KE + + D DL
Sbjct: 168 DNILYAKVVKLMGNRINAATLDFSEILADE--------VEAELKEASMVSTRTEVSDLDL 219
Query: 178 LSKAIHWFDILYNLRDN--VSHYVETRIQMVAPNLCALLGPDTAAKLVTHCGSVKELSVV 235
+ +L D + ++ ++ +APNL AL+G A+L++HCGS+ LS +
Sbjct: 220 MHIQELCDQVLSIAEDKTLLCDDLKNKMNKIAPNLTALVGELVGARLISHCGSLWNLSKL 279
Query: 236 PSCNLASIGQDKTLHGKSLDISGVRQKGYLFYTDVVQTQPPEFQKQALRMVSAKVALAAR 295
P + +G +KTL+ + G +++ +V+ PE + + R ++AK ALA R
Sbjct: 280 PWSTIQILGAEKTLYKALKTKQATPKYGLIYHAPLVRQAAPENKGKIARSLAAKSALAIR 339
Query: 296 ADCTMGNQVINPDGNSDGNSDASKLGLKWRHEIVEKLKKI----------IDPPNISNIK 345
D + GN + +G++ R ++ +L+ + + N + K
Sbjct: 340 CD-------------AFGNGQDNTMGVESRLKLEARLRNLEGGDLGACEEEEEVNDKDTK 386
Query: 346 PLPIPEDAPKKKRAGRRFRKYKE 368
E+ PK + ++ +K E
Sbjct: 387 KEADDEEEPKTEECSKKRKKEAE 409
>At3g05060 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p
Length = 533
Score = 75.5 bits (184), Expect = 2e-13
Identities = 90/383 (23%), Positives = 165/383 (42%), Gaps = 36/383 (9%)
Query: 89 VIKLGQLMPLFDTELSMVFQCIVDTYKAKFPGLETIVPERKQYVDVVKMLQQDIPNVQLD 148
+I+ L+ D EL+ + + Y FP L I+ + Y VK++ + +LD
Sbjct: 161 IIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIISDNILYAKSVKLMGNRVNAAKLD 220
Query: 149 --QVLSKE------ETLVVSMSLKTDFKEGARIDKDLLSKAIHWFDILYNLRDNVSHYVE 200
++L+ E + V+SM + + I ++L + + L R + Y++
Sbjct: 221 FSEILADEIEADLKDAAVISMGTEVSDLDLLHI-RELCDQVLS----LSEYRAQLYDYLK 275
Query: 201 TRIQMVAPNLCALLGPDTAAKLVTHCGSVKELSVVPSCNLASIGQDKTLHGKSLDISGVR 260
+R+ +APNL AL+G A+L++H GS+ LS P + +G +K L
Sbjct: 276 SRMNTIAPNLTALVGELVGARLISHGGSLLNLSKQPGSTVQILGAEKALFRALKTKHATP 335
Query: 261 QKGYLFYTDVVQTQPPEFQKQALRMVSAKVALAARADC-------TMG--------NQVI 305
+ G +F+ +V P+ + + R ++AK LA R D TMG ++
Sbjct: 336 KYGLIFHASLVGQAAPKHKGKISRSLAAKTVLAIRVDALGDSQDNTMGLENRAKLEARLR 395
Query: 306 NPDGNSDGNSDASKLGLKWRHEIVEKLKKIIDPPNISNIKPLPIPEDAPKKKRAGRRFRK 365
N +G G S G K + E+ K KK+ I+ K D+ G K
Sbjct: 396 NLEGKDLGRLSGSSKG-KPKIEVYNKDKKMGSGGLITPAKTYNTAADS----LLGETSAK 450
Query: 366 YKEQFKMSHLRQMQNRMEFGKEEQTTMDPYGEEIGFGMADSKNVSALSSFNKTKMRKSMR 425
+E K ++ + E EE+ + ++ A+++ V ++ K K +K R
Sbjct: 451 SEEPSKKKDKKKKKKVEEEKPEEEEPSEKKKKK--KAEAETEAVVEVAKEEKKKNKKK-R 507
Query: 426 LRLDQETKNTHSFLQDERSEKLK 448
++ET T + +D++ +K K
Sbjct: 508 KHEEEETTETPAKKKDKKEKKKK 530
>CE18307 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p
Length = 487
Score = 75.1 bits (183), Expect = 2e-13
Identities = 56/228 (24%), Positives = 103/228 (44%), Gaps = 11/228 (4%)
Query: 89 VIKLGQLMPLFDTELSMVFQCIVDTYKAKFPGLETIVPERKQYVDVVKML--QQDIPNVQ 146
+++ L+ D EL+ + + Y FP L + + + Y ++K + +Q+ N
Sbjct: 160 IVQAVSLLDDLDKELNNYVMRVREWYGWHFPELGKTIQDHQAYAKIIKAIGMRQNCINTD 219
Query: 147 LDQVLSKEETLVVS----MSLKTDFKEGARID-KDLLSKAIHWFDILYNLRDNVSHYVET 201
L +L +E V +S+ TD + I K L + I L R + Y++
Sbjct: 220 LSSILPEELEEKVKEDAEISMGTDISDIDLIHIKGLCDQVIE----LSAYRAQLFDYLKN 275
Query: 202 RIQMVAPNLCALLGPDTAAKLVTHCGSVKELSVVPSCNLASIGQDKTLHGKSLDISGVRQ 261
R+ +APNL LLG A+L++H GS+ L+ P+ + +G +K L +
Sbjct: 276 RMTALAPNLTVLLGELVGARLISHAGSLVSLAKAPASTIQILGAEKALFRALKTKKDTPK 335
Query: 262 KGYLFYTDVVQTQPPEFQKQALRMVSAKVALAARADCTMGNQVINPDG 309
G +++ ++ PP+ + + R ++AK +LA R D N G
Sbjct: 336 YGLIYHAQLITQAPPKVKGKMARKLAAKCSLATRIDALSDESATNEIG 383
>CE06114 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p
Length = 486
Score = 73.2 bits (178), Expect = 8e-13
Identities = 63/307 (20%), Positives = 133/307 (42%), Gaps = 37/307 (12%)
Query: 89 VIKLGQLMPLFDTELSMVFQCIVDTYKAKFPGLETIVPERKQY-------VDVVKMLQQD 141
VI+ L+ D ++++ I + Y +P L + P++ +Y +D KM + +
Sbjct: 171 VIQSIALLDQLDKDINLFGMRIREWYSYHYPELFRLAPDQYKYSRLAVAILDRNKMAENE 230
Query: 142 IPNVQLDQVLSK--EETLVVSMSLKTDF-KEGARIDKDLLSKAIHWFDILYNLRDNVSHY 198
++ ++L E+T + + +T + + +D + + + L R + Y
Sbjct: 231 NLENEILEILDNDSEKTAQIIEAARTSMGMDISDLDLENIKRFAARVSSLMEYRQQLHEY 290
Query: 199 VETRIQMVAPNLCALLGPDTAAKLVTHCGSVKELSVVPSCNLASIGQDKTLHGKSLDISG 258
++ R+ AP+L AL+G A+L++H GS+ L+ P+ + +G +K L S
Sbjct: 291 IKDRMDHCAPSLSALIGEQVGARLISHAGSLTNLAKYPASTVQILGAEKALFRALKTRSN 350
Query: 259 VRQKGYLFYTDVVQTQPPEFQKQALRMVSAKVALAARADCTMGNQVIN------------ 306
+ G LF++ + + + + R ++ K ++AAR DC V
Sbjct: 351 TPKYGLLFHSSFIGKAGTKNKGRVSRYLANKCSIAARVDCFSETPVSTYGEFLRQQVEDR 410
Query: 307 ---------PDGNSDGNSDASKLGLKWRHEIVEKLKKI------IDPPNISNIKPLPIPE 351
P N D +A + ++ + ++++K KK + +++ + E
Sbjct: 411 LEYFTSGTVPKKNIDVMKEAEEAAVEVKEKVIKKKKKAAKKAKRLAEESVTATAEAEVDE 470
Query: 352 DAPKKKR 358
DAPK K+
Sbjct: 471 DAPKPKK 477
>SPAC23G3.06 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p
Length = 508
Score = 72.4 bits (176), Expect = 1e-12
Identities = 58/265 (21%), Positives = 114/265 (42%), Gaps = 20/265 (7%)
Query: 89 VIKLGQLMPLFDTELSMVFQCIVDTYKAKFPGLETIVPERKQYVDVVKMLQQDIPNVQLD 148
+++ L+ D EL+ + + Y FP + I+ + Y V+K + + D
Sbjct: 163 IVQAIALLDDLDKELNTYAMRVREWYGWHFPEMGKIIQDNLAYARVIKAMGMRTKCSETD 222
Query: 149 QVLSKEETLVVSMSLKTDFKEGARIDKDLLSKAIHWFDILYNL---RDNVSHYVETRIQM 205
E + ++ + G I ++ L + D + L R +S Y+ R+Q
Sbjct: 223 FSDILPEEIEATLKSAAEISMGTEITEEDLDNIVMLADQVLELASYRAQLSEYLRNRMQA 282
Query: 206 VAPNLCALLGPDTAAKLVTHCGSVKELSVVPSCNLASIGQDKTLHGKSLDISGVRQKGYL 265
+APNL AL+G A+L+ H GS+ L+ P+ + +G +K L + G +
Sbjct: 283 IAPNLTALVGELVGARLIAHAGSLMNLAKQPASTIQILGAEKALFRALKTKHSTPKYGLI 342
Query: 266 FYTDVVQTQPPEFQKQALRMVSAKVALAARADCTMGNQVINPDGNSDGNSDASKLGLKWR 325
++ +V + + + R+++ K AL+ R D SD ++ +GL+ R
Sbjct: 343 YHASLVGQANSKNKGKIARVLATKAALSLRVDAL-----------SDKDTTNGNIGLENR 391
Query: 326 HEIVEKLKKIIDPPNISNIKPLPIP 350
+ +L+ ++ K LP+P
Sbjct: 392 IRVENRLR------SLEGGKLLPLP 410
>At5g27120 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p
Length = 533
Score = 72.4 bits (176), Expect = 1e-12
Identities = 91/389 (23%), Positives = 163/389 (41%), Gaps = 48/389 (12%)
Query: 89 VIKLGQLMPLFDTELSMVFQCIVDTYKAKFPGLETIVPERKQYVDVVKMLQQDIPNVQLD 148
+I+ L+ D EL+ + + + FP L IV + Y VK++ I +LD
Sbjct: 160 IIQAIGLLDDLDKELNTYAMRVREWFGWHFPELAKIVQDNILYAKAVKLMGNRINAAKLD 219
Query: 149 --QVLSKE------ETLVVSMSLKTDFKEGARIDKDLLSKAIHWFDILYNLRDNVSHYVE 200
++L+ E E V+SM + + I ++L + + L R + Y++
Sbjct: 220 FSEILADEIEAELKEAAVISMGTEVSDLDLLHI-RELCDQVLS----LAEYRAQLYDYLK 274
Query: 201 TRIQMVAPNLCALLGPDTAAKLVTHCGSVKELSVVPSCNLASIGQDKTLHGKSLDISGVR 260
+R+ +APNL AL+G A+L++H GS+ L+ P + +G +K L
Sbjct: 275 SRMNTIAPNLTALVGELVGARLISHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATP 334
Query: 261 QKGYLFYTDVVQTQPPEFQKQALRMVSAKVALAARADC-------TMG--------NQVI 305
+ G +F+ VV P+ + + R ++AK LA R D TMG ++
Sbjct: 335 KYGLIFHASVVGQAAPKNKGKISRSLAAKSVLAIRCDALGDSQDNTMGVENRLKLEARLR 394
Query: 306 NPDGNSDGNSDASKLGLKWRHEIVEKLKK-----IIDPPNISNIKPLPIPEDAPKKKRAG 360
+G G S G K + E+ +K KK +I P N + + G
Sbjct: 395 TLEGKDLGRLSGSAKG-KPKIEVYDKDKKKGSGGLITPAKTYNTAADSLLQTPTVDSENG 453
Query: 361 RRFRKYKEQFKMSHLRQMQNRMEFGKEEQTTMDPYGEEIGFGMADSKNVSALSSFNKTKM 420
+ +K K++ K + +EE T +P ++ +++ +A K K
Sbjct: 454 VKEKKDKKKKKKAD----------DEEEAKTEEPSKKKSNKKKTEAEPETAEEPAKKEKK 503
Query: 421 RKSMRLRLDQETKNTHSFLQDERSEKLKR 449
+K R +E + + E+SEK K+
Sbjct: 504 KK----RKHEEEETEMPAKKKEKSEKKKK 528
>ECU09g1600 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p
Length = 492
Score = 71.2 bits (173), Expect = 3e-12
Identities = 59/228 (25%), Positives = 106/228 (45%), Gaps = 15/228 (6%)
Query: 81 NHTTEPYNVIKLGQLMPLFDTELSMVFQCIVDTYKAKFPGLETIVPERKQYVDVVKMLQQ 140
N E + VI L+ D +++ I + Y FP L + + ++Y++VV+
Sbjct: 141 NVKREDFIVINTVMLLEQVDKDINSYSMRIREIYGWVFPELSRALKDNREYIEVVRCFV- 199
Query: 141 DIPNVQLDQVLSKEETLVVSMSLKTDFKE------GARI---DKDLLSKAIHWFDILYNL 191
N ++ + K L VS T+ KE G ++ D L K I +
Sbjct: 200 ---NEEVGKEDGKWLDLGVSGERLTEIKEMKKNSMGTKLSPADMTNLRKLIEIVSDKVEV 256
Query: 192 RDNVSHYVETRIQMVAPNLCALLGPDTAAKLVTHCGSVKELSVVPSCNLASIGQDKTLHG 251
R+N+S Y++ ++ +APNL +LG AA+L++ G + L+ P+ G +K+L
Sbjct: 257 RENLSGYLKDKMSSIAPNLATILGDVLAARLISQAGGLLNLAKAPASTFQLFGAEKSLF- 315
Query: 252 KSLDISGVRQKGYLFYTDVVQTQPPEFQKQAL-RMVSAKVALAARADC 298
+SL + K L YT ++ + K + R ++ K ++AA+ DC
Sbjct: 316 RSLKMKKKTPKYGLIYTSSYLSRARDEDKGRISRYIATKCSIAAKIDC 363
>ECU04g0820 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p
Length = 413
Score = 70.5 bits (171), Expect = 5e-12
Identities = 58/298 (19%), Positives = 128/298 (42%), Gaps = 37/298 (12%)
Query: 53 HAQFWHQGADLDDLIQLAKHETIIRDATNHTTEPYNVIKLGQLMPLFDTELSMVFQC--I 110
H F ++ + I H+ I N E + I + + L D + + C +
Sbjct: 103 HEYFGMNSSEYSERILCLAHK-ISMGKVNLVPEKIDTIVIQSVSLLDDMDRDINLHCMRL 161
Query: 111 VDTYKAKFPGLETIVPERKQYVDVV-------------KMLQQDIPNVQLDQVLSKEETL 157
+ Y FP L ++ ++Y+D+V K + +++ ++V+ ET
Sbjct: 162 KEWYGFHFPELSSVTDNNRKYLDLVVAIGRKGRIGEEKKEMIREVIGDGCEKVMRLAETS 221
Query: 158 VVSMSLKTDFKEGARIDKDLLSKAIHWFDILYNLRDNVSHYVETRIQMVAPNLCALLGPD 217
+ M ++D K +L + RD + Y+ +++ +AP+L AL+G
Sbjct: 222 MGVMMEESDILNIVEDAKSVLRS--------FEFRDELLEYIRVKMEGLAPSLTALVGEV 273
Query: 218 TAAKLVTHCGSVKELSVVPSCNLASIGQDKTLHGKSLDISGVRQKGYLFYTDVVQTQPPE 277
++++ GS+ L+ +P ++ +G +K L + + G ++ ++ P +
Sbjct: 274 IGGRMISKAGSLSNLAKMPGSSIQMMGAEKALFQALKSRTNTPKYGIIYGCSLLGQVPSQ 333
Query: 278 FQKQALRMVSAKVALAARADCTMGNQVINPDGNSDGNSDASKLGLKWRHEIVEKLKKI 335
+ + R +++K+A+AAR D S G ++G+K R +I +++K +
Sbjct: 334 HKGKIARSLASKIAIAARID-------------SYGEESTGEIGVKMREKIEKRIKDL 378
>7300850 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p
Length = 470
Score = 69.3 bits (168), Expect = 1e-11
Identities = 50/219 (22%), Positives = 101/219 (45%), Gaps = 11/219 (5%)
Query: 89 VIKLGQLMPLFDTELSMVFQCIVDTYKAKFPGLETIVPERKQYVDVVKMLQQDIPNVQLD 148
+I+ L+ D +++ I + Y FP L IVP+ + K ++ D N+ D
Sbjct: 143 IIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVKIVPDNYMFAKAAKFIK-DRKNLTQD 201
Query: 149 QVLSKEETLVVSMSLKTDFKEGARIDKDLLSKAIHWFDI---------LYNLRDNVSHYV 199
Q L E +V+ + + A++ + + +I L R +S Y+
Sbjct: 202 Q-LEDLEKIVMDSAKAQAIIDAAKMSMGMDISIVDLMNIELFAERVVKLSEYRKKLSTYL 260
Query: 200 ETRIQMVAPNLCALLGPDTAAKLVTHCGSVKELSVVPSCNLASIGQDKTLHGKSLDISGV 259
++ +VAPNL +L+G A+L++H GS+ L+ P+ + +G +K L S
Sbjct: 261 HNKMNLVAPNLQSLIGDQVGARLISHAGSLTNLAKYPASTVQILGAEKALFRALKTRSNT 320
Query: 260 RQKGYLFYTDVVQTQPPEFQKQALRMVSAKVALAARADC 298
+ G ++++ + + + + R ++ K ++A+R DC
Sbjct: 321 PKYGLIYHSSFIGRAGLKNKGRISRFLANKCSIASRIDC 359
>At1g56110 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p
Length = 522
Score = 68.6 bits (166), Expect = 2e-11
Identities = 81/382 (21%), Positives = 161/382 (41%), Gaps = 48/382 (12%)
Query: 89 VIKLGQLMPLFDTELSMVFQCIVDTYKAKFPGLETIVPERKQYVDVVKML-------QQD 141
VI+ ++ D +++ + + Y FP L IV + Y V KM+ +
Sbjct: 171 VIQAIFMLDTLDKDINSFAMRVREWYSWHFPELVKIVNDNYLYARVSKMIDDKSKLTEDH 230
Query: 142 IP---NVQLDQVLSKEETLVVSMSLKTDFKEGARIDKDLLSKAIHWFDILYNLRDNVSHY 198
IP V D+ +KE S+ +D I+ ++ + L + R + Y
Sbjct: 231 IPMLTEVLGDEDKAKEVIEAGKASMGSDLSPLDLINVQTFAQKVM---DLADYRKKLYDY 287
Query: 199 VETRIQMVAPNLCALLGPDTAAKLVTHCGSVKELSVVPSCNLASIGQDKTLHGKSLDISG 258
+ T++ +APNL AL+G A+L++H GS+ L+ PS L +G +K L
Sbjct: 288 LVTKMSDIAPNLAALIGEMVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGN 347
Query: 259 VRQKGYLFYTDVVQTQPPEFQKQALRMVSAKVALAARADCTMGNQVINPDGNSDGNSDAS 318
+ G +F++ + + + + R ++ K ++A+R DC +DG + A
Sbjct: 348 TPKYGLIFHSSFIGRASAKNKGRIARYLANKCSIASRIDCF-----------ADGATTA- 395
Query: 319 KLGLKWRHEIVEKL----KKIIDPPNISNIKPL--PIPEDAPKKKRAGRRFRKYKEQFKM 372
G K R ++ E+L K + N+ +K + + ++ K+ +K K++
Sbjct: 396 -FGEKLREQVEERLEFYDKGVAPRKNVDVMKEVIENLKQEEEGKEPVDASVKKSKKKKAK 454
Query: 373 SHLRQMQNRMEFGKEEQTTMDPYGEEIGFGMADSKNVSALSSFNKTKMRKSMRLRL--DQ 430
+ ME K E+ + + + K++ +K+ + + ++
Sbjct: 455 GEEEEEVVAMEEDKSEKKK-----------KKEKRKMETAEENEKSEKKKTKKSKAGGEE 503
Query: 431 ETKNTHSFLQDERSEKLKRSAE 452
ET + HS ++ +K +SAE
Sbjct: 504 ETDDGHS---TKKKKKKSKSAE 522
>At3g12860 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p
Length = 477
Score = 67.4 bits (163), Expect = 4e-11
Identities = 64/293 (21%), Positives = 125/293 (41%), Gaps = 28/293 (9%)
Query: 89 VIKLGQLMPLFDTELSMVFQCIVDTYKAKFPGLETIVPERKQY-------VDVVKMLQQD 141
VI+ ++ D +++ + + Y FP L IV + Y VD K+ ++
Sbjct: 171 VIQAIFMLDTLDKDINSFAMRVREWYSWHFPELVKIVNDNYLYAKVSKIIVDKSKLSEEH 230
Query: 142 IPNVQLDQVLSKEETL--VVSMSLKTDFKEGARIDKDLLSKAIHWFDILYNLRDNVSHYV 199
IP L + L E+ V+ + ++ + +D + L + R + Y+
Sbjct: 231 IP--MLTEALGDEDKAREVIEAGKASMGQDLSPVDLINVQTFAQRVMDLADYRKKLYDYL 288
Query: 200 ETRIQMVAPNLCALLGPDTAAKLVTHCGSVKELSVVPSCNLASIGQDKTLHGKSLDISGV 259
T++ +APNL AL+G A+L++H GS+ L+ PS L +G +K L
Sbjct: 289 VTKMSDIAPNLAALIGEMVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNT 348
Query: 260 RQKGYLFYTDVVQTQPPEFQKQALRMVSAKVALAARADCTMGNQVINPDGNSDGNSDASK 319
+ G +F++ + + + + R ++ K ++A+R DC N +
Sbjct: 349 PKYGLIFHSSFIGRASAKNKGRIARFLANKCSIASRIDCFSDN-------------STTA 395
Query: 320 LGLKWRHEIVEKL----KKIIDPPNISNIKPLPIPEDAPKKKRAGRRFRKYKE 368
G K R ++ E+L K + N+ +K E+ ++K + +K K+
Sbjct: 396 FGEKLREQVEERLDFYDKGVAPRKNVDVMKEKRKTEEKEEEKEEEKSKKKKKK 448
>YOR310c [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p
Length = 511
Score = 65.5 bits (158), Expect = 2e-10
Identities = 54/254 (21%), Positives = 116/254 (45%), Gaps = 22/254 (8%)
Query: 89 VIKLGQLMPLFDTELSMVFQCIVDTYKAKFPGLETIVPERKQYVDVV-------KMLQQD 141
+I+ L+ D EL+ + Y FP L IV + Y ++ K + D
Sbjct: 163 IIQAIALLDDLDKELNTYAMRCKEWYGWHFPELAKIVTDSVAYARIILTMGIRSKASETD 222
Query: 142 IPNVQLDQVLSKEETLVVSMSLKTDFKEGARIDKDLLSKAIHWFDILYNLRDNVSHYVET 201
+ + +++ + +T +S+ T+ + + + L++ I F R+ +S+Y+
Sbjct: 223 LSEILPEEIEERVKT-AAEVSMGTEITQTDLDNINALAEQIVEFAAY---REQLSNYLSA 278
Query: 202 RIQMVAPNLCALLGPDTAAKLVTHCGSVKELSVVPSCNLASIGQDKTLHGKSLDISGVRQ 261
R++ +APNL L+G A+L+ H GS+ L+ P+ + +G +K L +
Sbjct: 279 RMKAIAPNLTQLVGELVGARLIAHSGSLISLAKSPASTIQILGAEKALFRALKTKHDTPK 338
Query: 262 KGYLFYTDVVQTQPPEFQKQALRMVSAKVALAARADCTMGNQVINPDGNSDGNSDASKLG 321
G L++ +V + + + R+++AK A++ R D ++ D+ +G
Sbjct: 339 YGLLYHASLVGQATGKNKGKIARVLAAKAAVSLRYDAL-----------AEDRDDSGDIG 387
Query: 322 LKWRHEIVEKLKKI 335
L+ R ++ +L ++
Sbjct: 388 LESRAKVENRLSQL 401
>Hs7706254 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p
Length = 529
Score = 63.2 bits (152), Expect = 8e-10
Identities = 70/387 (18%), Positives = 158/387 (40%), Gaps = 52/387 (13%)
Query: 89 VIKLGQLMPLFDTELSMVFQCIVDTYKAKFPGLETIVPERKQYVDVVKML--QQDIPNVQ 146
+++ L+ D EL+ + Y FP L I+ + Y ++ + +++ + +
Sbjct: 162 IVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASAK 221
Query: 147 LDQVLSKEETLVVSMSLKTDFKEGARIDKDLLSKAIHWFDILYNL---RDNVSHYVETRI 203
L ++L +E V + + G + ++ + +H + + R + Y++ R+
Sbjct: 222 LSELLPEEVEAEVKAA--AEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRM 279
Query: 204 QMVAPNLCALLGPDTAAKLVTHCGSVKELSVVPSCNLASIGQDKTLHGKSLDISGVRQKG 263
+APN+ ++G A+L+ H GS+ L+ + + +G +K L + G
Sbjct: 280 MAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYG 339
Query: 264 YLFYTDVVQTQPPEFQKQALRMVSAKVALAARADCTMGNQVINPDGNSDGNSDASKLGLK 323
+++ +V P+ + + RM++AK LA R D + G +S +G++
Sbjct: 340 LIYHASLVGQTSPKHKGKISRMLAAKTVLAIRYD-------------AFGEDSSSAMGVE 386
Query: 324 WRHEIVEKLKKIIDPPNISNIKPLPIPEDAPKKKRAGRRFRKYKEQFKMSHLRQMQNRME 383
R ++ +L+ + ED +K +G K + K H
Sbjct: 387 NRAKLEARLRTL---------------EDRGIRKISGTGKALAKTE-KYEH--------- 421
Query: 384 FGKEEQTTMDPYGEEIGFGMADSKNVSALSSFNK--TKMRKSMRLRLDQETKNTHSFLQD 441
K E T DP G+ + + + + ++ K K ++++ E + ++
Sbjct: 422 --KSEVKTYDPSGDSTLPTCSKKRKIEQVDKEDEITEKKAKKAKIKVKVEEEEEEKVAEE 479
Query: 442 ERS---EKLKRSAEHPQATDPATSKQP 465
E + +K KR + +P + ++P
Sbjct: 480 EETSVKKKKKRGKKKHIKEEPLSEEEP 506
>7297189 [AJ] KOG2572 Ribosome biogenesis protein - Nop58p/Nop5p
Length = 454
Score = 61.2 bits (147), Expect = 3e-09
Identities = 47/214 (21%), Positives = 97/214 (44%), Gaps = 7/214 (3%)
Query: 89 VIKLGQLMPLFDTELSMVFQCIVDTYKAKFPGLETIVPERKQYVDVVKML--QQDIPNVQ 146
+++ L+ D EL+ + Y FP L I+ + +V +K++ + ++
Sbjct: 163 IVQAQCLLDDLDKELNNYMMRAREWYGWHFPELGKIITDNIAFVKTIKLVGTRDNMATSD 222
Query: 147 LDQVLSKEETLVVSMSLKTDFKEGARIDKDLLSKAIHWFDILYNLRDNVSH---YVETRI 203
L +L ++ V + + G I ++ + D + ++ D +H Y++ R+
Sbjct: 223 LSDILPEDVEEKVKEA--AEISMGTEISEEDVLNIQCLCDEIISINDYRTHLYDYLKARM 280
Query: 204 QMVAPNLCALLGPDTAAKLVTHCGSVKELSVVPSCNLASIGQDKTLHGKSLDISGVRQKG 263
+APNL L+G A+L+ H GS+ L+ PS + +G +K L + G
Sbjct: 281 MAMAPNLTVLVGDTVGARLIAHAGSLINLAKHPSSTVQILGAEKALFRALKTKKDTPKYG 340
Query: 264 YLFYTDVVQTQPPEFQKQALRMVSAKVALAARAD 297
+++ +V + + + R ++AK +LA R D
Sbjct: 341 LIYHAQLVGQASQKNKGKMSRSLAAKASLATRVD 374
>Hs5453794_1 [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p
Length = 498
Score = 59.7 bits (143), Expect = 9e-09
Identities = 69/331 (20%), Positives = 134/331 (39%), Gaps = 42/331 (12%)
Query: 89 VIKLGQLMPLFDTELSMVFQCIVDTYKAKFPGLETIVPERKQYVDVVKMLQQDIPNVQL- 147
+I+ L+ D +++ + + Y FP L I+ + Y L Q I N +
Sbjct: 174 IIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYC----RLAQFIGNRREL 229
Query: 148 -DQVLSKEETLVVSMSLKTDFKEGARIDKDLLSKAIHWFDI---------LYNLRDNVSH 197
+ L K E L + + + +R + AI +I L R ++
Sbjct: 230 NEDKLEKLEELTMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHT 289
Query: 198 YVETRIQMVAPNLCALLGPDTAAKLVTHCGSVKELSVVPSCNLASIGQDKTLHGKSLDIS 257
Y+ +++ VAP+L AL+G A+L+ H GS+ L+ P+ + +G +K L
Sbjct: 290 YLRSKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRG 349
Query: 258 GVRQKGYLFYTDVVQTQPPEFQKQALRMVSAKVALAARADCTMGNQVINPDGNSDGNSDA 317
+ G +F++ + + + + R ++ K ++A+R DC
Sbjct: 350 NTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCF-------------SEVPT 396
Query: 318 SKLGLKWRHEIVEKLKKI----IDPPNISNIKPLPIPEDAPK---------KKRAGRRFR 364
S G K R ++ E+L I N+ +K + +A + +K+ +R +
Sbjct: 397 SVFGEKLREQVEERLSFYETGEIPRKNLDVMKEAMVQAEAEEAAAEITRKLEKQEKKRLK 456
Query: 365 KYKEQFKMSHLRQMQNRMEFGKE-EQTTMDP 394
K K++ L +N +E E+T+ P
Sbjct: 457 KEKKRLAALALASSENSSSTPEECEETSEKP 487
>SPBC646.10c [AJ] KOG2573 Ribosome biogenesis protein - Nop56p/Sik1p
Length = 497
Score = 58.5 bits (140), Expect = 2e-08
Identities = 47/220 (21%), Positives = 97/220 (43%), Gaps = 14/220 (6%)
Query: 89 VIKLGQLMPLFDTELSMVFQCIVDTYKAKFPGLETIVPERKQYVDVV-----------KM 137
+I+ ++ D +++ + + Y FP L IV + +Y +V +M
Sbjct: 170 IIQAIAILDQLDKDINTFAMRMKEWYSWHFPELSKIVGDNYKYAVIVTLVGDKTTINDEM 229
Query: 138 LQQDIPNVQLDQVLSKEETLVVSMSLKTDFKEGARIDKDLLSKAIHWFDILYNLRDNVSH 197
L V D+ +++ +S+ D E ID + + L N R + +
Sbjct: 230 LHDLAAVVDDDKDIAQSIINAGKVSMGQDISE---IDLENILSFAERVIKLSNYRKQLHN 286
Query: 198 YVETRIQMVAPNLCALLGPDTAAKLVTHCGSVKELSVVPSCNLASIGQDKTLHGKSLDIS 257
Y+ ++ +VAPNL L+G A+L++H GS+ LS P+ + +G +K L
Sbjct: 287 YLVQKMNVVAPNLAELIGEMVGARLISHAGSLTNLSKCPASTVQILGAEKALFRALKTRG 346
Query: 258 GVRQKGYLFYTDVVQTQPPEFQKQALRMVSAKVALAARAD 297
+ G ++++ + + + + R ++ K ++A+R D
Sbjct: 347 NTPKYGIIYHSSFIGKAGAKNKGRISRFLANKCSIASRID 386
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.132 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,063,232
Number of Sequences: 60738
Number of extensions: 1220767
Number of successful extensions: 3961
Number of sequences better than 1.0e-05: 23
Number of HSP's better than 0.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3914
Number of HSP's gapped (non-prelim): 25
length of query: 467
length of database: 30,389,216
effective HSP length: 110
effective length of query: 357
effective length of database: 23,708,036
effective search space: 8463768852
effective search space used: 8463768852
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)