ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIV3787   suspect: LH   S     KOG4346  Function unknown                                               Uncharacterized conserved protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIV3787 1281895  1283892 666  
         (666 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC458.03 [S] KOG4346 Uncharacterized conserved protein               62   3e-09

>SPAC458.03 [S] KOG4346 Uncharacterized conserved protein
          Length = 868

 Score = 62.0 bits (149), Expect = 3e-09
 Identities = 39/133 (29%), Positives = 73/133 (54%), Gaps = 7/133 (5%)

Query: 438 LKETVKLVRQKKNFPTEVSFYSKELLKKIATISNKFDEKSFEEWKANALVSILVVCPDKI 497
           L+   KL+++K  F TE+  ++ ELL+ + ++ N+FD  +F+E +  A+V +L+ C D  
Sbjct: 530 LENASKLIKRKSAFGTELRDHADELLQTLISLQNRFDLMNFDEMQMTAIVELLLTCLDIC 589

Query: 498 VDLYAI-LFNNELSLQQRMVILTSAALSARELRGFDDEFVVKPKYDFPTNRLPWDESATE 556
             +    LF ++ S++Q+++IL+  +L+A +    D+E +      FP+  LP +     
Sbjct: 590 GPVICTNLFVSDYSMRQKILILSCISLAASKFNDDDNERL------FPSQLLPGNLHDQF 643

Query: 557 QQPENNKIQDITE 569
             P   KI D  E
Sbjct: 644 YSPTIEKISDELE 656


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.321    0.136    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,510,017
Number of Sequences: 60738
Number of extensions: 1501605
Number of successful extensions: 3882
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3882
Number of HSP's gapped (non-prelim): 1
length of query: 666
length of database: 30,389,216
effective HSP length: 113
effective length of query: 553
effective length of database: 23,525,822
effective search space: 13009779566
effective search space used: 13009779566
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)