ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV3823 good A KOG2481 RNA processing and modification Protein required for normal rRNA processing
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV3823 1297155 1298969 605
(605 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGR103w [A] KOG2481 Protein required for normal rRNA processing 726 0.0
SPBC19F5.05c [A] KOG2481 Protein required for normal rRNA proces... 428 e-119
Hs7657455 [A] KOG2481 Protein required for normal rRNA processing 364 e-100
CE21123 [A] KOG2481 Protein required for normal rRNA processing 320 4e-87
At5g14520 [A] KOG2481 Protein required for normal rRNA processing 311 2e-84
7297546 [A] KOG2481 Protein required for normal rRNA processing 290 4e-78
Hs22041980 [A] KOG2481 Protein required for normal rRNA processing 157 3e-38
Hs17452841 [A] KOG2481 Protein required for normal rRNA processing 112 2e-24
ECU11g0460 [A] KOG2481 Protein required for normal rRNA processing 59 2e-08
>YGR103w [A] KOG2481 Protein required for normal rRNA processing
Length = 605
Score = 726 bits (1874), Expect = 0.0
Identities = 356/474 (75%), Positives = 406/474 (85%), Gaps = 9/474 (1%)
Query: 1 MRIKKRNTRGNARNFITRSQAVRKLQISLADFRRLCIFKGIYPREPRNKKKANKGSTAPT 60
MRIKK+NTRGNARNFITRSQAVRKLQ+SLADFRRLCIFKGIYPREPRNKKKANKGSTAPT
Sbjct: 1 MRIKKKNTRGNARNFITRSQAVRKLQVSLADFRRLCIFKGIYPREPRNKKKANKGSTAPT 60
Query: 61 TFYYYKDIQYLMHEPVLAKFREHKTFAKKLTKALGRGEVSAAKRLEENRPNYQLDNIIKE 120
TFYY KDIQYLMHEPVLAKFREHKTFA+KLT+ALGRGEVS+AKRLEENR +Y LD+IIKE
Sbjct: 61 TFYYAKDIQYLMHEPVLAKFREHKTFARKLTRALGRGEVSSAKRLEENRDSYTLDHIIKE 120
Query: 121 RYPSFADALRDVDDALNMLFLFANLPATDQVSSRITQSAQQMCDQWSAYIAKERCVRKVF 180
RYPSF DA+RD+DDALNMLFLF+NLP+T+QVSS+I AQ++C+QW AY+AKER VRKVF
Sbjct: 121 RYPSFPDAIRDIDDALNMLFLFSNLPSTNQVSSKIINDAQKICNQWLAYVAKERLVRKVF 180
Query: 181 VSIKGVYYQASVKGEDVRWLVPYKFPENIPSDVDFRIMLTFLEFYSTLLHFVLFKLYTDA 240
VSIKGVYYQA++KGE+VRWLVP+KFPENIPSDVDFRIMLTFLEFYSTLLHFVL+KLYTD+
Sbjct: 181 VSIKGVYYQANIKGEEVRWLVPFKFPENIPSDVDFRIMLTFLEFYSTLLHFVLYKLYTDS 240
Query: 241 GLVYPPKLDIKKNKLIGGLSAYILESNDEKSSLAVKPKELSENVEVQELGANTLKTALKA 300
GL+YPPKLD+KK+K+I GLS+YILES E S L + P E+ E+V+V+ L A+TLK+AL A
Sbjct: 241 GLIYPPKLDLKKDKIISGLSSYILESRQEDSLLKLDPTEIEEDVKVESLDASTLKSALNA 300
Query: 301 DSXXXXXX---------XXXXXXXXXXXXXXLDKFEDTNKNQGDQLEQPSKFDSPVATLF 351
D LD FED NKN+GD L QPSK+DSPVA+LF
Sbjct: 301 DEANTDETEKEEEQEKKQEKEQEKEQNEETELDTFEDNNKNKGDILIQPSKYDSPVASLF 360
Query: 352 SEFVFYVGREVPLDIVEFLILSCGGSAVSEATLDQLTDKQDIDLSKVTHQIVDRPVLKNK 411
S FVFYV REVP+DI+EFLILSCGG+ +SEA +DQ+ +K+DID+SKVTHQIVDRPVLKNK
Sbjct: 361 SAFVFYVSREVPIDILEFLILSCGGNVISEAAMDQIENKKDIDMSKVTHQIVDRPVLKNK 420
Query: 412 VANRTYVQPQWIFDSINKCELVPANLYLPGEPLPPHLSPWGDSTGYDPTAENDE 465
VA RTY+QPQWIFD INK ELVPAN YLPGE LPPHLSPWGD+ GYDPTA +E
Sbjct: 421 VAGRTYIQPQWIFDCINKGELVPANKYLPGEALPPHLSPWGDAIGYDPTAPVEE 474
>SPBC19F5.05c [A] KOG2481 Protein required for normal rRNA processing
Length = 607
Score = 428 bits (1101), Expect = e-119
Identities = 223/470 (47%), Positives = 304/470 (64%), Gaps = 16/470 (3%)
Query: 2 RIKKRNTRGNARNFITRSQAVRKLQISLADFRRLCIFKGIYPREPRNKKKANKGSTAPTT 61
R+K++ G AR +ITR+QA++KLQ++LADFRR+CI KG+YPREP+NKKKANKGSTAP T
Sbjct: 3 RVKQKGKAGAARIYITRNQALKKLQLTLADFRRICILKGVYPREPKNKKKANKGSTAPVT 62
Query: 62 FYYYKDIQYLMHEPVLAKFREHKTFAKKLTKALGRGEVSAAKRLEENRPNYQLDNIIKER 121
FYY KDIQYL+HEP++ KFRE+K FA+KL+KALG+GE+ AKRLE +P Y LD+IIKER
Sbjct: 63 FYYTKDIQYLLHEPIVQKFREYKVFARKLSKALGKGELETAKRLEARKPTYSLDHIIKER 122
Query: 122 YPSFADALRDVDDALNMLFLFANLPATDQVSSRITQSAQQMCDQWSAYIAKERCVRKVFV 181
YP+F DAL+D+DDAL+MLFLF+ +P TD++ + + +++C ++ Y+ + +RK F+
Sbjct: 123 YPTFHDALKDIDDALSMLFLFSTMPVTDKIGAATVANCERLCAEFQHYVIRSNSLRKAFL 182
Query: 182 SIKGVYYQASVKGEDVRWLVPYKFPENIPSDVDFRIMLTFLEFYSTLLHFVLFKLYTDAG 241
SIKG+YYQA + GE + W+VPYKF +++P+DVDFRIM TFLEFY L+ FV FKLY G
Sbjct: 183 SIKGIYYQAEIFGEQITWIVPYKFAQSVPTDVDFRIMHTFLEFYQALMGFVNFKLYNTLG 242
Query: 242 LVYPPKLDIKKNKLIGGLSAYILESNDEKSSLAVKPKELSENVEVQELGANTLKTALK-- 299
L YPPK+D+ K++ GL+AY LE E SSL P + N + TLK+ ++
Sbjct: 243 LRYPPKIDVAKSESAAGLAAYELE---ESSSL---PAIVHGNNKNARKNIATLKSKIRDI 296
Query: 300 ----ADSXXXXXXXXXXXXXXXXXXXXLDKFEDTN-KNQGDQLEQPSKFDSPVATLFSEF 354
A+ LD+F+ + + D S S +LFS F
Sbjct: 297 VNSDANVVEQSEKTTEDADEEPETEENLDEFKPADGADNEDSKSLVSHISSSNTSLFSNF 356
Query: 355 VFYVGREVPLDIVEFLILSCGGSAVSEATLDQLTDKQDIDLSKVTHQIVDRPVLKNKVAN 414
F++ REVP +EF+I + GG + L + + D +TH I DRP + K
Sbjct: 357 TFFLSREVPRFSLEFVIRAFGGKVGWDPILGSGSPFSESD-PVITHHICDRPHISQKYEG 415
Query: 415 RTYVQPQWIFDSINKCELVPANLYLPGEPLPPHLSPW--GDSTGYDPTAE 462
R Y+QPQW++DSINK L +LY G LPPHLSP+ YDP AE
Sbjct: 416 RIYIQPQWVYDSINKGILERTDLYACGATLPPHLSPFVKVGENDYDPEAE 465
>Hs7657455 [A] KOG2481 Protein required for normal rRNA processing
Length = 588
Score = 364 bits (935), Expect = e-100
Identities = 203/457 (44%), Positives = 276/457 (59%), Gaps = 45/457 (9%)
Query: 4 KKRNTRGNARNFITRSQAVRKLQISLADFRRLCIFKGIYPREPRNKKKANKGSTAPTTFY 63
KK+ RG+A N+ITR++A +KLQ+SLADFRRLCI KGIYP EP++KKK NKGSTA TFY
Sbjct: 6 KKKYERGSATNYITRNKARKKLQLSLADFRRLCILKGIYPHEPKHKKKVNKGSTAARTFY 65
Query: 64 YYKDIQYLMHEPVLAKFREHKTFAKKLTKALGRGEVSAAKRLEENRPNYQLDNIIKERYP 123
KDI++L+HEP++ KFRE+K F +KL KA G+ E + +RL++N+PNY+LD+IIKERYP
Sbjct: 66 LIKDIRFLLHEPIVNKFREYKVFVRKLRKAYGKSEWNTVERLKDNKPNYKLDHIIKERYP 125
Query: 124 SFADALRDVDDALNMLFLFANLPATDQVSSRITQSAQQMCDQWSAYIAKERCVRKVFVSI 183
+F DALRD+DDAL+M FLF+ P T + + Q +++ ++ YI R +RKVF+SI
Sbjct: 126 TFIDALRDLDDALSMCFLFSTFPRTGKCHVQTIQLCRRLTVEFMHYIIAARALRKVFLSI 185
Query: 184 KGVYYQASVKGEDVRWLVPYKFPENIPSDVDFRIMLTFLEFYSTLLHFVLFKLYTDAGLV 243
KG+YYQA V G+ + W+ PY F + P+DVD+R+M TF EFY+TLL FV F+LY L
Sbjct: 186 KGIYYQAEVLGQPIVWITPYAFSHDHPTDVDYRVMATFTEFYTTLLGFVNFRLYQLLNLH 245
Query: 244 YPPKLDIK-KNKLIGGLSAYILESNDEKSSLAVKPKELS--------ENVEVQELGANTL 294
YPPKL+ + + + G Y L+S LA L+ E EV E +
Sbjct: 246 YPPKLEGQAQAEAKAGEGTYALDSESCMEKLAALSASLARVVVPATEEEAEVDEFPTDGE 305
Query: 295 KTALKADSXXXXXXXXXXXXXXXXXXXXLDKFEDTNKNQGDQLEQPSKFDSPVATLFSEF 354
+A + ED K +LE K LF
Sbjct: 306 MSAQE---------------------------EDRRK----ELEAQEKHKK----LFEGL 330
Query: 355 VFYVGREVPLDIVEFLILSCGGSAVSEATLDQLTDKQDIDLSKVTHQIVDRPVLKNKVAN 414
F++ REVP + + F+I S GG + +L + D+ S++THQIVDRP + V
Sbjct: 331 KFFLNREVPREALAFIIRSFGGEVSWDKSL-CIGATYDVTDSRITHQIVDRPGQQTSVIG 389
Query: 415 RTYVQPQWIFDSINKCELVPANLYLPGEPLPPHLSPW 451
R YVQPQW+FDS+N L+P Y G LPPHLSP+
Sbjct: 390 RCYVQPQWVFDSVNARLLLPVAEYFSGVQLPPHLSPF 426
>CE21123 [A] KOG2481 Protein required for normal rRNA processing
Length = 531
Score = 320 bits (820), Expect = 4e-87
Identities = 176/452 (38%), Positives = 258/452 (56%), Gaps = 48/452 (10%)
Query: 2 RIKKRNTRGNARNFITRSQAVRKLQISLADFRRLCIFKGIYPREPRNKKKANKGSTAPTT 61
R K++ T G A +++R QA++KLQ++L DFRRLCI KGIYP EP +KK+ANKGSTA
Sbjct: 4 RFKQKYTAGAAVAYMSRKQALKKLQLTLKDFRRLCIIKGIYPHEPAHKKQANKGSTANKV 63
Query: 62 FYYYKDIQYLMHEPVLAKFREHKTFAKKLTKALGRGEVSAAKRLEENRPNYQLDNIIKER 121
FYY KDI +L HEP++ KFR++K F +KL + E K+L EN+P Y LD I+KER
Sbjct: 64 FYYRKDINFLAHEPIINKFRDYKVFLRKLNHLKAKKEEDKLKKLYENKPVYSLDTIVKER 123
Query: 122 YPSFADALRDVDDALNMLFLFANLPATDQVSSRITQSAQQMCDQWSAYIAKERCVRKVFV 181
+P+F ALRD+DDAL++ F FA LP T + + S +++ ++ Y+ + + +R F+
Sbjct: 124 FPTFGSALRDMDDALSLCFTFAMLPHTRVLKEGMIDSCRKLTAEFMHYVIESQSLRNTFI 183
Query: 182 SIKGVYYQASVKGEDVRWLVPYKFPENIPSDVDFRIMLTFLEFYSTLLHFVLFKLYTDAG 241
SIKG+YYQA V GE + W+VP++ +DVDF +++TF+EFY +L FV FKLY D G
Sbjct: 184 SIKGIYYQAEVHGEKITWVVPHERGLPHVTDVDFTVLVTFVEFYIAMLGFVNFKLYQDIG 243
Query: 242 LVYPPKLD--IKKNKLIGGLSAYILESNDEKSSLAVKPKELSENVEVQELGANTLKTALK 299
L YPP++ +K ++ +E+ + K + K L++ +V++ + L
Sbjct: 244 LFYPPQIGQVVKTDE---------METEEYKEKVYSLAKPLAKRKDVEQAEDDEPLDLLG 294
Query: 300 ADSXXXXXXXXXXXXXXXXXXXXLDKFEDTNKNQGDQLEQPSKFDSPVATLFSEFVFYVG 359
DS D L Q + + T+F VFY+
Sbjct: 295 EDS--------------------------------DALAQKVREAKSIKTMFKGCVFYLN 322
Query: 360 REVPLDIVEFLILSCGGSAVSEATLDQLTDKQDIDLSKVTHQIVDRPVLKNKVANRTYVQ 419
RE P + + F+I + GG E L D ++H +VDRP+ K +V NR YVQ
Sbjct: 323 RECPKEALTFIIRNGGGIVGWEGGPTDL----KADSKNISHHVVDRPMDKLEV-NRLYVQ 377
Query: 420 PQWIFDSINKCELVPANLYLPGEPLPPHLSPW 451
PQW+FD +N +P Y+PG LPPH SP+
Sbjct: 378 PQWVFDCLNARRKLPTERYMPGVALPPHFSPF 409
>At5g14520 [A] KOG2481 Protein required for normal rRNA processing
Length = 590
Score = 311 bits (796), Expect = 2e-84
Identities = 179/464 (38%), Positives = 261/464 (55%), Gaps = 40/464 (8%)
Query: 6 RNTRGNARNFITRSQAVRKLQISLADFRRLCIFKGIYPREPRNKKKANKGSTAPTTFYYY 65
+ GNA ++TRSQA++ LQ++L FRRLCI KGI+PREP+ K K N T+Y+
Sbjct: 10 KKKEGNAARYMTRSQALKHLQVNLNLFRRLCIVKGIFPREPKKKIKGNHH-----TYYHV 64
Query: 66 KDIQYLMHEPVLAKFREHKTFAKKLTKALGRGEVSAAKRLEENRPNYQLDNIIKERYPSF 125
KDI +LMHEP+L KFRE KT+ KK+ KA + A+ L +P Y+LD +I+ERYP+F
Sbjct: 65 KDIAFLMHEPLLEKFREIKTYQKKVKKAKAKKNEELARLLLTRQPTYKLDRLIRERYPTF 124
Query: 126 ADALRDVDDALNMLFLFANLPATDQVSSRITQ--SAQQMCDQWSAYIAKERCVRKVFVSI 183
DALRD+DD L M+ LFA LPA+D+ + + + + +++ +W AYI++ +RKVFVS+
Sbjct: 125 IDALRDLDDCLTMVHLFAVLPASDRENLEVKRVHNCRRLTHEWQAYISRSHALRKVFVSV 184
Query: 184 KGVYYQASVKGEDVRWLVPYKFPENIPSDVDFRIMLTFLEFYSTLLHFVLFKLYTDAGLV 243
KG+YYQA ++G+ + WL P+ + +DVDF ++LTFLEFY TLL F+ FKLY +
Sbjct: 185 KGIYYQAEIEGQKITWLTPHAIQQVFTNDVDFGVLLTFLEFYETLLAFINFKLYHSLNVK 244
Query: 244 YPPKLDIKKNKLIGGLSAYILESNDEKSSLAVKPK------ELSENVEVQELGANTLKTA 297
YPP LD + L L A + +AV+PK S + E EL L+
Sbjct: 245 YPPILDSRLEALAADLYALSRYIDASSRGMAVEPKVDASFSSQSNDREESELRLAQLQHQ 304
Query: 298 LKADSXXXXXXXXXXXXXXXXXXXXLDKFEDTNKNQGDQLEQPSKFDSPVATLFSEFVFY 357
L + + D NK + E +LF + F+
Sbjct: 305 LPSSE----------------PGALMHLVADNNKEVEEDEE-----TRVCKSLFKDLKFF 343
Query: 358 VGREVPLDIVEFLILSCGGSAVSEATLDQLTDKQDIDLSKVTHQIVDRPVLKNKVANRTY 417
+ REVP + ++ +I + GG E + K+D + +TH I+D+P + +R Y
Sbjct: 344 LSREVPRESLQLVITAFGGMVSWEG--EGAPFKEDDE--SITHHIIDKPSAGHLYLSRVY 399
Query: 418 VQPQWIFDSINKCELVPANLYLPGEPLPPHLSPWGD--STGYDP 459
VQPQWI+D +N ++P YL G PPHLSP+ D + GY P
Sbjct: 400 VQPQWIYDCVNARIILPTEKYLVGRIPPPHLSPFVDNEAEGYVP 443
>7297546 [A] KOG2481 Protein required for normal rRNA processing
Length = 627
Score = 290 bits (742), Expect = 4e-78
Identities = 160/456 (35%), Positives = 259/456 (56%), Gaps = 30/456 (6%)
Query: 1 MRIKKRNTRGNARNFITRSQAVRKLQISLADFRRLCIFKGIYPREPRNKKKANKGSTAPT 60
MR K+ G A +I+R A+RKLQ+SL DFRRLCI KG+YPREP+++++A KGS+
Sbjct: 1 MRRPKKYESGEATQYISRRAALRKLQLSLNDFRRLCILKGVYPREPKHRRRAQKGSSEIK 60
Query: 61 TFYYYKDIQYLMHEPVLAKFREHKTFAKKLTKALGRGEVSAAKRLEENRPNYQLDNIIKE 120
Y+ KDI++L+HE ++ R++K FAKK + + KR P +LD+I+KE
Sbjct: 61 VLYHTKDIRFLLHESIVWTLRDYKIFAKKSNRDRAIKDFRNLKRRLALFPEIKLDHIVKE 120
Query: 121 RYPSFADALRDVDDALNMLFLFANLPATDQVSSRITQSAQQMCDQWSAYIAKERCVRKVF 180
RYP+F DAL+D+DD L +LFLF+ P+ + + +++ ++ Y+ + +RKVF
Sbjct: 121 RYPTFIDALKDLDDCLTLLFLFSTFPSLHLIPREQSNLCRRLTIEFLHYVIASKSLRKVF 180
Query: 181 VSIKGVYYQASVKGEDVRWLVPYKFPENIPS--DVDFRIMLTFLEFYSTLLHFVLFKLYT 238
+SIKG Y+QA +KG+ V W+VP+ +P S +VDF++M F+EFY+ +L F F+L+
Sbjct: 181 ISIKGYYFQAEIKGQKVTWIVPHYYPFKPQSRQEVDFKVMSIFVEFYTIMLGFTNFRLFH 240
Query: 239 DAGLVYPPKLDIKKNKLIGGLSAYILESNDEKSSLAVKPKELSENVEVQELGANTLKTAL 298
L YPP+ + +L+ ++E ++K + + + L L+T
Sbjct: 241 GLNLAYPPQ-----------FPSSVLQDSEE----SLKDEASFVSDRIAALNFELLRTDK 285
Query: 299 KADSXXXXXXXXXXXXXXXXXXXXLDKFEDTNKNQGDQLEQPSKFDSPVATLFSEFVFYV 358
+ +D + + +++Q ++ S + TLF F++
Sbjct: 286 VQEDEEELDIDMELLE------------QDGDSKRIIKMKQEAQEVSRLRTLFKGLKFFI 333
Query: 359 GREVPLDIVEFLILSCGGSAVSEATLDQLTDKQDIDLSKVTHQIVDRPVLKNKVANRTYV 418
REVP + + LI S GG ++++ + + D +THQIVDRP + + +R Y+
Sbjct: 334 NREVPREPLVILIRSFGGKVSWDSSIFAGSTYDEGD-ETITHQIVDRPSITTQYISRDYI 392
Query: 419 QPQWIFDSINKCELVPANLYLPGEPLPPHLSPWGDS 454
QPQW+FD +N+ +L+P N Y GE LPPHLSP+ DS
Sbjct: 393 QPQWVFDCVNQRQLLPTNKYFIGETLPPHLSPFVDS 428
>Hs22041980 [A] KOG2481 Protein required for normal rRNA processing
Length = 568
Score = 157 bits (398), Expect = 3e-38
Identities = 82/214 (38%), Positives = 131/214 (60%), Gaps = 1/214 (0%)
Query: 4 KKRNTRGNARNFITRSQAVRKLQISLADFRRLCIFKGIYPREPRNKKKANKGSTAPTTFY 63
K++ RG+ N T+S+A +KL +++AD RR C GIYP EP+++KK NKG+TA T Y
Sbjct: 74 KQQQERGSPANHNTKSKARKKLPLTMADSRRPCTLMGIYPHEPKHEKKVNKGATAAQTSY 133
Query: 64 YYKDIQYLMHEPVLAKFREHKTFAKKLTKALGRGEVSAAKRLEENRPNYQLDNIIKERYP 123
+DI++L+ E ++ K RE K +K +A + E + + L++N+ +Y+ D+IIKE YP
Sbjct: 134 LMEDIRFLIQEFIVNKVRECKVSVRKPREAYEKSERNTVEHLKDNKADYKHDHIIKEWYP 193
Query: 124 SFADALRDV-DDALNMLFLFANLPATDQVSSRITQSAQQMCDQWSAYIAKERCVRKVFVS 182
+F DA D+ A + FLF+ P TD+ +I ++ +++ YI KVF+S
Sbjct: 194 TFIDARGDLGGSAFSTCFLFSTFPRTDKCHVQIVPLCCRLAAEFTYYIIAACAPSKVFLS 253
Query: 183 IKGVYYQASVKGEDVRWLVPYKFPENIPSDVDFR 216
IK +YYQA V + + W+ P F + +DVD+R
Sbjct: 254 IKRIYYQAEVLAQPIVWITPCAFSHDHRTDVDYR 287
Score = 54.3 bits (129), Expect = 5e-07
Identities = 26/53 (49%), Positives = 31/53 (58%)
Query: 399 THQIVDRPVLKNKVANRTYVQPQWIFDSINKCELVPANLYLPGEPLPPHLSPW 451
THQIVD P + V R YV+PQW+FDS+N P Y P LP H SP+
Sbjct: 382 THQIVDWPGQQTSVIGRHYVEPQWLFDSVNARLHFPGAEYFPAMQLPLHSSPF 434
>Hs17452841 [A] KOG2481 Protein required for normal rRNA processing
Length = 505
Score = 112 bits (279), Expect = 2e-24
Identities = 53/102 (51%), Positives = 74/102 (71%)
Query: 4 KKRNTRGNARNFITRSQAVRKLQISLADFRRLCIFKGIYPREPRNKKKANKGSTAPTTFY 63
KK RG+A N+IT+++A +KLQ+SLADFR+LCI K IYP EP++KKK NK STA TFY
Sbjct: 6 KKNYERGSATNYITQNKAQKKLQLSLADFRQLCILKRIYPHEPKHKKKVNKRSTAAQTFY 65
Query: 64 YYKDIQYLMHEPVLAKFREHKTFAKKLTKALGRGEVSAAKRL 105
+DI++L+HEP++ KF E+K +KL KA + + + L
Sbjct: 66 LIEDIRFLLHEPIVNKFWEYKVLIRKLLKAYRKSKNGTLRSL 107
Score = 80.1 bits (196), Expect = 9e-15
Identities = 72/240 (30%), Positives = 108/240 (45%), Gaps = 46/240 (19%)
Query: 212 DVDFRIMLTFLEFYSTLLHFVLFKLYTDAGLVYPPKLD---IKKNKLIGGLSAYILESND 268
D+D+R+M TF EFYSTLL F+ F LY L YP KL+ ++ K G A ES+
Sbjct: 165 DMDYRVMATFTEFYSTLLGFINFHLYQWLNLHYPLKLEGQAQEEAKASEGTHALDSESSM 224
Query: 269 EK-----SSLA-VKPKELSENVEVQELGANTLKTALKADSXXXXXXXXXXXXXXXXXXXX 322
EK +SLA V E EV E AN +A
Sbjct: 225 EKMAALTASLARVVVPATEEEPEVDEFPANGEMSAQ------------------------ 260
Query: 323 LDKFEDTNKNQGDQLEQPSKFDSPVATLFSEFVFYVGREVPLDIVEFLILSCGGSAVSEA 382
E+ + + + E+ KF + F++ + VP + + F+I G + ++
Sbjct: 261 ----EEERRKELEGQEKHKKFSEGLK-------FFLNQGVPREALAFVISFWGEVSWDKS 309
Query: 383 TLDQLTDKQDIDLSKVTHQIVDRPVLKNKVANRTYVQPQWIFDSINKCELVPANLYLPGE 442
T DI S++TH+IV+ P + + R Y+QPQW+ DS+N L+ Y PG+
Sbjct: 310 LCIGAT--YDITDSRITHKIVNWPGQQTSIIGRCYMQPQWVIDSVNARLLLLMAEYFPGK 367
>ECU11g0460 [A] KOG2481 Protein required for normal rRNA processing
Length = 400
Score = 58.9 bits (141), Expect = 2e-08
Identities = 41/192 (21%), Positives = 88/192 (45%), Gaps = 15/192 (7%)
Query: 13 RNFITRSQAVRKLQISLADFRRLCIFKGIYPREPRNKKKANKGSTAPTTFYY-YKDIQYL 71
+ +I++ ++ L + +F +L G+YP P++ +K ++G FYY D L
Sbjct: 10 KKYISKGLVMKNLGLREKEFDKLVALCGVYPYIPKDNRKVDQGDG----FYYRISDANRL 65
Query: 72 MHEPVLAKFREHKTFAKKLTKALGRGEVSAAKRLEENRPNYQLDNIIKERYPSFADALRD 131
H V ++K +K + G G + + + Y ++IK R+ +A+ +
Sbjct: 66 AHSDVYRTLVKNKRLEEKKKRYSGTGFEYKIRNICDEEYGYV--DLIKSRFKGLGEAVDE 123
Query: 132 VDDALNMLFLFANLPATDQVSSRITQSAQQMCDQWSAYIAKERCVRKVFVSIKGVYYQAS 191
++ L+ L+L L D+++ ++ + + ++ + + ++S GVY Q +
Sbjct: 124 LNYTLSSLYLGRMLELDDRIA--------EVVEMFEDFVRRRSLLEYSYMSKAGVYNQIT 175
Query: 192 VKGEDVRWLVPY 203
+ V W VPY
Sbjct: 176 LGRIKVVWFVPY 187
Score = 58.5 bits (140), Expect = 3e-08
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 15/116 (12%)
Query: 336 QLEQPSKFDSPVATLFSEFVFYVGREVPLDIVEFLILSCGGSAVSEATLDQLTDKQDIDL 395
++E K S + +FS FY+ +V D + + LSCGGS V + DI +
Sbjct: 263 KMEMVYKPCSSLKGIFSGVKFYIESDVVGDSLRLIALSCGGSVVGSPC------EADIHV 316
Query: 396 SKVTHQIVDRPVLKNKVANRTYVQPQWIFDSINKCELVPANLYLPGEPLPPHLSPW 451
S+ ++V+ N TYVQPQ++FDS+N+ + Y G+ LP H SP+
Sbjct: 317 SEKVDEMVE---------NVTYVQPQYLFDSLNQGKRACVENYCVGKRLPRHASPF 363
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.135 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,044,222
Number of Sequences: 60738
Number of extensions: 1128529
Number of successful extensions: 2772
Number of sequences better than 1.0e-05: 9
Number of HSP's better than 0.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2739
Number of HSP's gapped (non-prelim): 20
length of query: 605
length of database: 30,389,216
effective HSP length: 112
effective length of query: 493
effective length of database: 23,586,560
effective search space: 11628174080
effective search space used: 11628174080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)