ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV3865 good J KOG1468 Translation, ribosomal structure and biogenesis Predicted translation initiation factor related to eIF-2B alpha/beta/delta subunits (CIG2/IDI2)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV3865 1309647 1310867 407
(407 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YPR118w [J] KOG1468 Predicted translation initiation factor rela... 450 e-126
Hs22051459 [J] KOG1468 Predicted translation initiation factor r... 246 6e-65
SPBC23E6.10c [J] KOG1468 Predicted translation initiation factor... 239 4e-63
7302052 [J] KOG1468 Predicted translation initiation factor rela... 238 9e-63
At2g05830 [J] KOG1468 Predicted translation initiation factor re... 223 5e-58
CE07818 [J] KOG1468 Predicted translation initiation factor rela... 214 1e-55
SPCC11E10.07c [J] KOG1466 Translation initiation factor 2B alpha... 65 1e-10
At1g72340 [J] KOG1466 Translation initiation factor 2B alpha sub... 60 6e-09
Hs4503503 [J] KOG1466 Translation initiation factor 2B alpha sub... 56 8e-08
CE00367 [J] KOG1466 Translation initiation factor 2B alpha subun... 52 2e-06
YKR026c [J] KOG1466 Translation initiation factor 2B alpha subun... 51 3e-06
At1g53900_2 [J] KOG1466 Translation initiation factor 2B alpha s... 51 3e-06
At1g53880_2 [J] KOG1466 Translation initiation factor 2B alpha s... 51 3e-06
7301868 [J] KOG1466 Translation initiation factor 2B alpha subun... 50 6e-06
>YPR118w [J] KOG1468 Predicted translation initiation factor related to
eIF-2B alpha/beta/delta subunits (CIG2/IDI2)
Length = 411
Score = 450 bits (1157), Expect = e-126
Identities = 242/416 (58%), Positives = 303/416 (72%), Gaps = 15/416 (3%)
Query: 1 MSLKAIVFDRVLGK-CSVKIXXXXXXXXXXXXXXINTIDDGYRSIKSMQVRGAPAIAIVG 59
MSL+AIVFDR + SVK+ I+TIDDGY IKSMQVRGAPAIAIVG
Sbjct: 1 MSLEAIVFDRSEPENVSVKVLDQLLLPYTTKYVPIHTIDDGYSVIKSMQVRGAPAIAIVG 60
Query: 60 VLSTLMECQLLLQESFVKTQSFYDLTQLEK---ILNERLDLLLSSRPTAVNLSNAITDLR 116
LS L E QL+ + Y L E +LN+RLD LLSSRPTAVNLSN++ +++
Sbjct: 61 SLSVLTEVQLIKHNPTSDVATLYSLVNWESTKTVLNKRLDFLLSSRPTAVNLSNSLVEIK 120
Query: 117 KLI--SNDIGKTYNSLFQYACDIIDHDYADNFTMGENGAKHLLAQLEKEAFEGDFGVLTI 174
++ S+D+ SL+ Y C++ID D A+N MG+NGAK+L+ L+K+ F+ +F VLTI
Sbjct: 121 NILKSSSDLKAFDGSLYNYVCELIDEDLANNMKMGDNGAKYLIDVLQKDGFKDEFAVLTI 180
Query: 175 CNTGSLATSGYGTALGVIRSLYE----RTKKQISGDEQPKRTKTSNAKMVRVFPLETRPY 230
CNTGSLATSGYGTALGVIRSL++ +T K SG + K + M VFPLETRPY
Sbjct: 181 CNTGSLATSGYGTALGVIRSLWKDSLAKTDKADSGLDNEKCPR-----MGHVFPLETRPY 235
Query: 231 NQGSRLTAYELLHDEIPSTLITDSSISYLVSTSKIPIKAAFVGADRIVKNGDTANKIGTY 290
NQGSRLTAYEL++D+IPSTLITDSSI+Y + TS IPIKAAFVGADRIV+NGDTANKIGT
Sbjct: 236 NQGSRLTAYELVYDKIPSTLITDSSIAYRIRTSPIPIKAAFVGADRIVRNGDTANKIGTL 295
Query: 291 QLSIVCRHFGIKFYVVAPTTTFDSNTETGDKIVVEERPPNEFRFVQGTLIDGTDPTPVLN 350
QL+++C+ FGIKF+VVAP TT D+ TETGD I+VEER P EF+ V GT+I+ + + +LN
Sbjct: 296 QLAVICKQFGIKFFVVAPKTTIDNVTETGDDIIVEERNPEEFKVVTGTVINPENGSLILN 355
Query: 351 ESKTPVKAKVGITPLDMPVWNPSFDITPYTHIDGIITEKGVFAKDENGNFHLETAF 406
ES P+ KVGI PL++ VWNP+FDITP+ IDGIITE+GVF K+ +G F LE+ F
Sbjct: 356 ESGEPITGKVGIAPLEINVWNPAFDITPHELIDGIITEEGVFTKNSSGEFQLESLF 411
>Hs22051459 [J] KOG1468 Predicted translation initiation factor related to
eIF-2B alpha/beta/delta subunits (CIG2/IDI2)
Length = 369
Score = 246 bits (627), Expect = 6e-65
Identities = 157/404 (38%), Positives = 227/404 (55%), Gaps = 64/404 (15%)
Query: 1 MSLKAIVFDRVLGKCSVKIXXXXXXXXXXXXXXINTIDDGYRSIKSMQVRGAPAIAIVGV 60
M+L+AI + R S++I + ++ + +I++M+VRGAPAIA+VG
Sbjct: 1 MTLEAIRYSRG----SLQILDQLLLPKQSRYEAVGSVHQAWEAIRAMKVRGAPAIALVGC 56
Query: 61 LSTLMECQLLLQESFVKTQSFYDLTQLEKILNERLDLLLSSRPTAVNLSNAITDLRKLIS 120
LS +E Q L L + ++L L+++RPTAVN++ A DL + +
Sbjct: 57 LSLAVELQA--------GAGGPGLAALVAFVRDKLSFLVTARPTAVNMARAARDLADVAA 108
Query: 121 NDI---GKTYNSLFQYAC----DIIDHDYADNFTMGENGAKHLLAQLEKEAFEGDFGVLT 173
+ G T ++ + D+++ D DN ++G+ GA+HLL ++ G VLT
Sbjct: 109 REAEREGATEEAVRERVICCTEDMLEKDLRDNRSIGDLGARHLLERVAPSG--GKVTVLT 166
Query: 174 ICNTGSLATSGYGTALGVIRSLYERTKKQISGDEQPKRTKTSNAKMVRVFPLETRPYNQG 233
CNTG+LAT+GYGTALGVIRSL+ S ++ F ETRPYNQG
Sbjct: 167 HCNTGALATAGYGTALGVIRSLH------------------SLGRLEHAFCTETRPYNQG 208
Query: 234 SRLTAYELLHDEIPSTLITDSSISYLVSTSKIPIKAAFVGADRIVKNGDTANKIGTYQLS 293
+RLTA+EL++++IP+TLITDS ++ + + + A VGADR+V NGDTANK+GTYQL+
Sbjct: 209 ARLTAFELVYEQIPATLITDSMVA--AAMAHRGVSAVVVGADRVVANGDTANKVGTYQLA 266
Query: 294 IVCRHFGIKFYVVAPTTTFDSNTETGDKIVVEERPPNEFRFVQGTLIDGTDPTPVLNESK 353
IV +H GI FYV AP+++ D ETG +I++EERP E V G
Sbjct: 267 IVAKHHGIPFYVAAPSSSCDLRLETGKEIIIEERPGQELTDVNG---------------- 310
Query: 354 TPVKAKVGITPLDMPVWNPSFDITPYTHI-DGIITEKGVFAKDE 396
V I + VWNP+FD+TP+ I GIITE GVFA +E
Sbjct: 311 ------VRIAAPGIGVWNPAFDVTPHDLITGGIITELGVFAPEE 348
>SPBC23E6.10c [J] KOG1468 Predicted translation initiation factor related to
eIF-2B alpha/beta/delta subunits (CIG2/IDI2)
Length = 359
Score = 239 bits (611), Expect = 4e-63
Identities = 141/367 (38%), Positives = 208/367 (56%), Gaps = 40/367 (10%)
Query: 34 INTIDDGYRSIKSMQVRGAPAIAIVGVLSTLMECQLLLQESFVKTQSFYDLTQLEKILNE 93
++ ++D + IK MQVRGAPAIAIV LS + + L +++ K E ++N
Sbjct: 30 VSNVEDAFAVIKKMQVRGAPAIAIVAALSVAVGLKHLSEDADAK----------EYVINS 79
Query: 94 RLDLLLSSRPTAVNLSNAITDLRKLISNDIGKTYNSLFQYACDIIDHDYADNFTMGENGA 153
+ L SRPTAVNL ++ + + N + Q A ++ D DN +G G
Sbjct: 80 -FEHLKQSRPTAVNLFETAKFMQGIALQEGKNCRNKIIQEAERMLVKDLEDNHNIGTAGR 138
Query: 154 KHLLAQLEKEAFEGDFGVLTICNTGSLATSGYGTALGVIRSLYERTKKQISGDEQPKRTK 213
K LL + + VLT CNTGSLATSGYGTALG+IRSL+E
Sbjct: 139 KFLLQHYKDK---DKLTVLTHCNTGSLATSGYGTALGIIRSLHE---------------- 179
Query: 214 TSNAKMVRVFPLETRPYNQGSRLTAYELLHDEIPSTLITDSSISYLVSTSKIPIKAAFVG 273
+ + + ETRPYNQGSRLTA+EL+HD+IP+TL+TDS+++ ++ I A VG
Sbjct: 180 --SGNLEHAYCTETRPYNQGSRLTAFELVHDKIPATLVTDSTVASIMHK----IDAIVVG 233
Query: 274 ADRIVKNGDTANKIGTYQLSIVCRHFGIKFYVVAPTTTFDSNTETGDKIVVEERPPNEFR 333
ADR+ +NGDTANKIGTY L+I+ +HFG F V AP ++ D++ +G +I +E+RPP E
Sbjct: 234 ADRVTRNGDTANKIGTYNLAILAKHFGKPFIVAAPFSSIDTSLASGSQITIEQRPPIEMT 293
Query: 334 FVQGTLIDGTDPTPVLNESKTPVKAKVGITPLDMPVWNPSFDITPYTHIDGIITEKGVFA 393
+ G +I ++ + P + ++ I + V++P+FD+TP I I TEKG +
Sbjct: 294 TITGPIITDSNS----RNLEDPKRVRISIAAPGIDVYSPAFDVTPANLITAIATEKGFYT 349
Query: 394 KDENGNF 400
+ N +
Sbjct: 350 QQTNNKY 356
>7302052 [J] KOG1468 Predicted translation initiation factor related to
eIF-2B alpha/beta/delta subunits (CIG2/IDI2)
Length = 364
Score = 238 bits (608), Expect = 9e-63
Identities = 154/408 (37%), Positives = 214/408 (51%), Gaps = 67/408 (16%)
Query: 1 MSLKAIVFDRVLGKCSVKIXXXXXXXXXXXXXXINTIDDGYRSIKSMQVRGAPAIAIVGV 60
MSL++I + R S++I + ++DG++ I MQVRGAPAIAIVG
Sbjct: 1 MSLQSIKYSRG----SLEILDQLLLPGQSKYVVVRGVEDGWKVINKMQVRGAPAIAIVGC 56
Query: 61 LSTLMECQLLLQESFVKTQSFYDLTQLEKILNERLDLLLSSRPTAVNLSNAITDLRKLIS 120
LS +E + + F + L + + +L+ L+S+RPTAVN+ A +L L +
Sbjct: 57 LSLAVE---------INPEDFENKKSLRQEIEGKLNYLVSARPTAVNMKIAADELITLAN 107
Query: 121 N-------DIGKTYNSLFQYACDIIDHDYADNFTMGENGAKHLLAQLEKEA-----FEGD 168
D+ + + ++ D ADN +G NGA+ +L + K G
Sbjct: 108 ELYKDEAIDVTQMKHRFLDATEAMLKKDIADNRAIGANGAQAILQGVAKAGKAPAGSTGS 167
Query: 169 FGVLTICNTGSLATSGYGTALGVIRSLYERTKKQISGDEQPKRTKTSNAKMVRVFPLETR 228
VLT CNTGSLAT+GYGTALGV+R L E K+ V+ ETR
Sbjct: 168 VRVLTHCNTGSLATAGYGTALGVVRQLAEL------------------GKLEHVYCTETR 209
Query: 229 PYNQGSRLTAYELLHDEIPSTLITDSSISYLVSTSKIPIKAAFVGADRIVKNGDTANKIG 288
PYNQG+RLTAYEL+H++ P+TL+ DS ++ L+ + A VGADR+ NGDTANKIG
Sbjct: 210 PYNQGARLTAYELVHEKFPATLVLDSMVAALLRAKNVA--AVVVGADRVASNGDTANKIG 267
Query: 289 TYQLSIVCRHFGIKFYVVAPTTTFDSNTETGDKIVVEERPPNEFRFVQGTLIDGTDPTPV 348
TYQ+++V +H + FYV AP T+ D GD I++EERP E V I P
Sbjct: 268 TYQIAVVAKHHDVPFYVAAPLTSIDLAIPGGDHIIIEERPDREMTHVGEHRI----AAPG 323
Query: 349 LNESKTPVKAKVGITPLDMPVWNPSFDITPYTHIDGIITEKGVFAKDE 396
+N WNP+FD+TP + I GIITE+GVF E
Sbjct: 324 IN------------------CWNPAFDVTPASLITGIITERGVFKPAE 353
>At2g05830 [J] KOG1468 Predicted translation initiation factor related to
eIF-2B alpha/beta/delta subunits (CIG2/IDI2)
Length = 365
Score = 223 bits (567), Expect = 5e-58
Identities = 146/369 (39%), Positives = 204/369 (54%), Gaps = 61/369 (16%)
Query: 34 INTIDDGYRSIKSMQVRGAPAIAIVGVLSTLMECQLLLQESFVKTQSFYDLTQLEKI--L 91
I DG+ +I+ M VRGAPAIAI LS +E V +D + + + L
Sbjct: 36 IRDASDGWSAIQEMVVRGAPAIAIAAALSLAVE---------VFNFHGFDGSASDAVAFL 86
Query: 92 NERLDLLLSSRPTAVNLSNAITDLRKLISNDIGKT------YNSLFQYACDIIDHDYADN 145
+LD L+SSRPTAVNL++A L+ +I+ + + + + + D+++ D N
Sbjct: 87 ENKLDYLVSSRPTAVNLADAALKLKHVIAKALATATEAKSIFKAYIEASEDMLEDDVVSN 146
Query: 146 FTMGENGAKHLLAQLEKEAFEGD-FGVLTICNTGSLATSGYGTALGVIRSLYERTKKQIS 204
+G G L+ L ++A D VLT CNTGSLAT+GYGTALGVIR+L+
Sbjct: 147 KAIGNFG----LSLLRQQAKNPDKLSVLTHCNTGSLATAGYGTALGVIRALH-------- 194
Query: 205 GDEQPKRTKTSNAKMVRVFPLETRPYNQGSRLTAYELLHDEIPSTLITDSSISYLVSTSK 264
+ + R + ETRP+NQGSRLTA+EL+H++IP+TLI DS+ + L+ +
Sbjct: 195 ----------TQGILERAYCTETRPFNQGSRLTAFELVHEKIPATLIADSAAAALMKDGR 244
Query: 265 IPIKAAFVGADRIVKNGDTANKIGTYQLSIVCRHFGIKFYVVAPTTTFDSNTETGDKIVV 324
+ VGADR+ NGDTANKIGTY L++ +H GI FYV AP T+ D + +G +IV+
Sbjct: 245 VD--GVIVGADRVASNGDTANKIGTYSLALCAKHHGIPFYVAAPLTSVDLSLSSGKEIVI 302
Query: 325 EERPPNEFRFVQGTLIDGTDPTPVLNESKTPVKAKVGITPLDMPVWNPSFDITPYTHIDG 384
EER P E G L + A GI+ VWNP+FD+TP I G
Sbjct: 303 EERSPKELMHTHGGLGERI--------------AAPGIS-----VWNPAFDMTPAELIAG 343
Query: 385 IITEKGVFA 393
IITEK F+
Sbjct: 344 IITEKVRFS 352
>CE07818 [J] KOG1468 Predicted translation initiation factor related to
eIF-2B alpha/beta/delta subunits (CIG2/IDI2)
Length = 366
Score = 214 bits (546), Expect = 1e-55
Identities = 135/362 (37%), Positives = 195/362 (53%), Gaps = 65/362 (17%)
Query: 34 INTIDDGYRSIKSMQVRGAPAIAIVGVLSTLMECQLLLQESFVKTQSFYDLTQLEKILNE 93
+ + D + IKSMQVRGAP IA+VG L L+E Q + S + ++S +
Sbjct: 52 VEGVSDAFAVIKSMQVRGAPLIAVVGSLGLLLEIQ---KASELDSESII----------Q 98
Query: 94 RLDLLLSSRPTAVNLSNAITDLRKLISN----DIGKTYNSLFQYACDIIDHDYADNFTMG 149
+++ L+SSRPTAV+L N++ L+ ++ + D+ K Y ++ + N +
Sbjct: 99 KINFLISSRPTAVDLRNSLNGLKPILESQDYSDVVKL-EKCRSYLLNVYTDEKLQNRILV 157
Query: 150 ENGAKHLLAQL-EKEAFEGDFGVLTICNTGSLATSGYGTALGVIRSLYERTKKQISGDEQ 208
N + LL+ +KE V+TICNTGSLAT +GTALGVIR+L+ + ++
Sbjct: 158 WNAYQELLSAFPDKEKLT----VMTICNTGSLATISWGTALGVIRALHSENRLKL----- 208
Query: 209 PKRTKTSNAKMVRVFPLETRPYNQGSRLTAYELLHDEIPSTLITDSSISYLVSTSKIPIK 268
V+ LETRPYNQG RLT+ ELLH E+P LITDS ++ + ++
Sbjct: 209 -------------VYVLETRPYNQGIRLTSIELLHGEVPFKLITDSMAAWAMKNHQVD-- 253
Query: 269 AAFVGADRIVKNGDTANKIGTYQLSIVCRHFGIKFYVVAPTTTFDSNTETGDKIVVEERP 328
GAD + +NGDTANKIGTY L+++C+H I FY V P TT + N TG++I +EERP
Sbjct: 254 CVLTGADNVARNGDTANKIGTYMLAVLCKHHNINFYPVVPFTTINKNIATGEEIKIEERP 313
Query: 329 PNEFRFVQGTLIDGTDPTPVLNESKTPVKAKVGITPLDMPVWNPSFDITPYTHIDGIITE 388
E V G LI + + PVWNP+FD+TP I I+T+
Sbjct: 314 SAEMLRVNGVLIGNS----------------------ECPVWNPAFDVTPAHLITKILTD 351
Query: 389 KG 390
G
Sbjct: 352 FG 353
>SPCC11E10.07c [J] KOG1466 Translation initiation factor 2B alpha subunit
(eIF-2Balpha/GCN3)
Length = 341
Score = 65.5 bits (158), Expect = 1e-10
Identities = 48/178 (26%), Positives = 84/178 (46%), Gaps = 22/178 (12%)
Query: 221 RVFPLETRPYNQGSRLTAYELLHDEIPSTLITDSSISYLVSTSKIPIKAAFVGADRIVKN 280
+VF E+RP G +T L + IP+ ++ DS++S+ ++ + VGA+ +V+N
Sbjct: 163 KVFVTESRPSGSGCLMTR-TLKNACIPTCMVLDSAVSFTMNR----VDLVLVGAEGVVEN 217
Query: 281 GDTANKIGTYQLSIVCRHFGIKFYVVAPTTTFDSNTETGDKIVVEERPPNEFRFVQGTLI 340
G N+IGT+QL++ +H FY VA + F + RP EF
Sbjct: 218 GGLINQIGTFQLAVFAKHAHKPFYAVAESHKFVRMFPLSQYDIPFSRPILEF-------- 269
Query: 341 DGTDPTP-VLNESKTPVKAKVGITPLDMPV------WNPSFDITPYTHIDGIITEKGV 391
DP+P ++ P+ ++ + NP+ D+TP + G+IT+ G+
Sbjct: 270 --DDPSPETVHPEPEPIPTPSDAIHNELIMNEEQIRNNPTLDVTPPEFVSGLITDLGI 325
>At1g72340 [J] KOG1466 Translation initiation factor 2B alpha subunit
(eIF-2Balpha/GCN3)
Length = 362
Score = 60.1 bits (144), Expect = 6e-09
Identities = 50/183 (27%), Positives = 79/183 (42%), Gaps = 32/183 (17%)
Query: 211 RTKTSNAKMVRVFPLETRPYNQGSRLTAYELLHDEIPSTLITDSSISYLVSTSKIPIKAA 270
+T N K+ RV E RP G L++ EL +IP L+ DS+++Y S +
Sbjct: 199 KTAAQNNKLFRVLCTEGRPDGTGVLLSS-ELSKLDIPVKLLLDSAVAY----SMDEVDMV 253
Query: 271 FVGADRIVKNGDTANKIGTYQLSIVCRHFGIKFYVVAPTTTFDSNTETGDKIVVEERPPN 330
FVGAD +V++G N +GTYQ+++V YV A
Sbjct: 254 FVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAA----------------------E 291
Query: 331 EFRFVQGTLIDGTDPTPVLNESKTPVKAKVGITPLDMPVWNPSFDITPYTHIDGIITEKG 390
++F + +D D P L + VK P + V + D TP ++ + T+ G
Sbjct: 292 SYKFARLYPLDQKDMAPALRPIEFGVK-----IPTKVEVERSARDYTPPQYLTLLFTDLG 346
Query: 391 VFA 393
V +
Sbjct: 347 VLS 349
>Hs4503503 [J] KOG1466 Translation initiation factor 2B alpha subunit
(eIF-2Balpha/GCN3)
Length = 305
Score = 56.2 bits (134), Expect = 8e-08
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 29/174 (16%)
Query: 218 KMVRVFPLETRPYNQGSRLTAYELLHDEIPSTLITDSSISYLVSTSKIPIKAAFVGADRI 277
K V+ E++P G ++ A L H +P T++ D+++ Y++ + + I VGA+ +
Sbjct: 146 KRFSVYVTESQPDLSGKKM-AKALCHLNVPVTVVLDAAVGYIMEKADLVI----VGAEGV 200
Query: 278 VKNGDTANKIGTYQLSIVCRHFGIKFYVVAPTTTFDSNTETGDKIVVEERPPNEFRFVQG 337
V+NG NKIGT Q+++ + FYVVA + F + V P++F++
Sbjct: 201 VENGGIINKIGTNQMAVCAKAQNKPFYVVAESFKFVRLFPLNQQDV-----PDKFKYKAD 255
Query: 338 TLIDGTDPTPVLNESKTPVKAKVGITPLDMPVWNPSFDITPYTHIDGIITEKGV 391
TL KV T D+ +P D T + I + T+ GV
Sbjct: 256 TL-------------------KVAQTGQDLKEEHPWVDYTAPSLITLLFTDLGV 290
>CE00367 [J] KOG1466 Translation initiation factor 2B alpha subunit
(eIF-2Balpha/GCN3)
Length = 305
Score = 51.6 bits (122), Expect = 2e-06
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 220 VRVFPLETRPYNQGSRLTAYELLHDEIPSTLITDSSISYLVSTSKIPIKAAFVGADRIVK 279
+ V+ E++P G +L EL + +P+TL+ DS + Y++ I+A VGA+ +++
Sbjct: 152 LHVWVTESQPDASG-KLVFEELKKNGVPTTLVLDSCVGYVMER----IQAVLVGAEGVME 206
Query: 280 NGDTANKIGTYQLSIVCRHFGIKFYVVAPTTTF 312
G NKIGT + I+ + + YV A T F
Sbjct: 207 TGGIINKIGTVNVCIIAKSRHVPVYVCAETIKF 239
>YKR026c [J] KOG1466 Translation initiation factor 2B alpha subunit
(eIF-2Balpha/GCN3)
Length = 305
Score = 51.2 bits (121), Expect = 3e-06
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 226 ETRPYNQGSRLTAYELLHDE-IPSTLITDSSISYLVSTSKIPIKAAFVGADRIVKNGDTA 284
E+RP QG++L Y LL + IP TLI DS++ ++ + FVGA+ + ++G
Sbjct: 155 ESRPSKQGNQL--YTLLEQKGIPVTLIVDSAVGAVIDK----VDKVFVGAEGVAESGGII 208
Query: 285 NKIGTYQLSIVCRHFGIKFYVVAPTTTF 312
N +GTY + ++ + FYVV + F
Sbjct: 209 NLVGTYSVGVLAHNARKPFYVVTESHKF 236
>At1g53900_2 [J] KOG1466 Translation initiation factor 2B alpha subunit
(eIF-2Balpha/GCN3)
Length = 402
Score = 51.2 bits (121), Expect = 3e-06
Identities = 47/181 (25%), Positives = 75/181 (40%), Gaps = 39/181 (21%)
Query: 211 RTKTSNAKMVRVFPLETRPYNQGSRLTAYELLHDEIPSTLITDSSISYLVSTSKIPIKAA 270
+T N K+ RV L A EL +IP L+ DS+++Y S +
Sbjct: 246 KTSAQNKKLFRVLCTGV--------LLANELAKLDIPVKLLIDSAVAY----SMDEVDMV 293
Query: 271 FVGADRIVKNGDTANKIGTYQLSIVCRHFGIKFYVVAPTTTFDSNTETGDKIVVEERPPN 330
FVGAD +V++G N +GTYQ+++V + YV A
Sbjct: 294 FVGADGVVESGGIINMMGTYQIALVAQSMNKPVYVAA----------------------E 331
Query: 331 EFRFVQGTLIDGTDPTPVLNESKTPVKAKVGITPLDMPVWNPSFDITPYTHIDGIITEKG 390
++F + +D D P L P+ V + P + V + D TP ++ + T+ G
Sbjct: 332 SYKFARLYPLDQKDLEPALR----PIDFSVPVPP-KVEVERSARDYTPPQYLTLLFTDLG 386
Query: 391 V 391
V
Sbjct: 387 V 387
>At1g53880_2 [J] KOG1466 Translation initiation factor 2B alpha subunit
(eIF-2Balpha/GCN3)
Length = 402
Score = 51.2 bits (121), Expect = 3e-06
Identities = 47/181 (25%), Positives = 75/181 (40%), Gaps = 39/181 (21%)
Query: 211 RTKTSNAKMVRVFPLETRPYNQGSRLTAYELLHDEIPSTLITDSSISYLVSTSKIPIKAA 270
+T N K+ RV L A EL +IP L+ DS+++Y S +
Sbjct: 246 KTSAQNKKLFRVLCTGV--------LLANELAKLDIPVKLLIDSAVAY----SMDEVDMV 293
Query: 271 FVGADRIVKNGDTANKIGTYQLSIVCRHFGIKFYVVAPTTTFDSNTETGDKIVVEERPPN 330
FVGAD +V++G N +GTYQ+++V + YV A
Sbjct: 294 FVGADGVVESGGIINMMGTYQIALVAQSMNKPVYVAA----------------------E 331
Query: 331 EFRFVQGTLIDGTDPTPVLNESKTPVKAKVGITPLDMPVWNPSFDITPYTHIDGIITEKG 390
++F + +D D P L P+ V + P + V + D TP ++ + T+ G
Sbjct: 332 SYKFARLYPLDQKDLEPALR----PIDFSVPVPP-KVEVERSARDYTPPQYLTLLFTDLG 386
Query: 391 V 391
V
Sbjct: 387 V 387
>7301868 [J] KOG1466 Translation initiation factor 2B alpha subunit
(eIF-2Balpha/GCN3)
Length = 306
Score = 50.1 bits (118), Expect = 6e-06
Identities = 36/139 (25%), Positives = 65/139 (45%), Gaps = 10/139 (7%)
Query: 212 TKTSNAKMVRVFPLETRPYNQGSRLTAYELLHDEIPSTLITDSSISYLVSTSKIPIKAAF 271
T + N K V+ + N G + +L I TLI DS+ Y++ + +
Sbjct: 147 TASQNKKSFHVYVTQGGTGNSGEEMVK-DLHAAGIDCTLILDSATGYVMES----VDFVL 201
Query: 272 VGADRIVKNGDTANKIGTYQLSIVCRHFGIKFYVVAPTTTFDSNTETGDKIVVEERPPNE 331
VGA+ +V++G N+IGTY + + R FYV+A + F + + PNE
Sbjct: 202 VGAEAVVESGGIINRIGTYTMGLCAREMKKPFYVLAESFKFSRLYPLNQRDL-----PNE 256
Query: 332 FRFVQGTLIDGTDPTPVLN 350
+++ + L D + P+++
Sbjct: 257 YKYSRKHLNDVSKVHPLVD 275
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.136 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,372,792
Number of Sequences: 60738
Number of extensions: 1005343
Number of successful extensions: 2592
Number of sequences better than 1.0e-05: 14
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2549
Number of HSP's gapped (non-prelim): 14
length of query: 407
length of database: 30,389,216
effective HSP length: 109
effective length of query: 298
effective length of database: 23,768,774
effective search space: 7083094652
effective search space used: 7083094652
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)