ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIV3959   suspect: LH   R     KOG1293  General function prediction only                               Proteins containing armadillo/beta-catenin-like repeat

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIV3959 1340141  1342981 947  
         (947 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YIL017c [R] KOG1293 Proteins containing armadillo/beta-catenin-l...   295   3e-79

>YIL017c [R] KOG1293 Proteins containing armadillo/beta-catenin-like repeat
          Length = 921

 Score =  295 bits (754), Expect = 3e-79
 Identities = 217/744 (29%), Positives = 358/744 (47%), Gaps = 73/744 (9%)

Query: 224 SRGSAGSEQKIQPFES--------LPQCLHISDLFDVQLIFVISNLLTVLQSNGGNQFSF 275
           SR ++ S  K  PF++        +P+ ++IS+++D  L+ +   L              
Sbjct: 222 SRPASPSSVKNDPFDNKGVDCTRAIPKKINISNMYDSSLLSLALLLYLRYHYMIPGDRKL 281

Query: 276 LADMKVNVFYASLLRHPDIRLKTSALSFFYCQLGDSWYSENRSDFGSNTDSNLPFPIKLW 335
             D    +F   LL+  D+ ++  AL F    L   +++E++    + T   +       
Sbjct: 282 RNDATFKMFVLGLLKSNDVNIRCVALKF----LLQPYFTEDKKWEDTRTLEKI------- 330

Query: 336 LPTLISTLNEPELPIFFSPLEILCSLATEFTVAHKPENVVIDTFFDSNLLNGMIDTFLRL 395
           LP L+ + N   LP +F P ++L SL   +       N V+ T   +N++  ++  F + 
Sbjct: 331 LPYLVKSFNYDPLPWWFDPFDMLDSLIVLYNEITPMNNPVLTTLAHTNVIFCILSRFAQC 390

Query: 396 LSLEKQDTNKLQLLSDYLKFFSEIIGKDERCRLLFLENIAVLQYMENAFSSHLLILNNF- 454
           LSL + +   L+  + ++K  +     DE+ RLL L +  +L ++E    SH+ ++ +F 
Sbjct: 391 LSLPQHNEATLKTTTKFIKICASFAASDEKYRLLLLNDTLLLNHLEYGLESHITLIQDFI 450

Query: 455 ------REDWTQLRNMAPLPPLFDSELVTNWAKCLKACSRSVGVLRTSLKRNKLADYTLK 508
                 +E  T+  +M  LPP++D + V  W   LK+ SRSV  LRT+LKRNK+A   L+
Sbjct: 451 SLKDEIKETTTESHSMC-LPPIYDHDFVAAWLLLLKSFSRSVSALRTTLKRNKIAQLLLQ 509

Query: 509 LAREIYEIVSMTYDGGIPHXXXXXXXXXXXXXXAMSNFVVEFSSLRTLMKKNGIIALIKH 568
           +  + Y +    Y  G                 ++ NFVVEFS+L++ M +NGII +I+ 
Sbjct: 510 ILSKTYTLTKECYFAG-QDFMKPEIMIMGITLGSICNFVVEFSNLQSFMLRNGIIDIIEK 568

Query: 569 IFTNPIFNSEYLDRALMPEFAKGNPIIVFHNEASVYSEITVIQTNSLWVLRHLIYNSETC 628
           + T+P+FNS+        E       I  H           ++ NSLWVLRHL+YN +  
Sbjct: 569 MLTDPLFNSKKAWDDNEDERRIALQGIPVHE----------VKANSLWVLRHLMYNCQNE 618

Query: 629 DKLELLSQIDLESILQFVHSAEPSVLNQCFQLLRNLTCNSRKVINMILDSFKHTDMLANT 688
           +K +LL++I +  IL F++    +V  QCFQLLRNLTCNSRK++N++L+ FK  +   + 
Sbjct: 619 EKFQLLAKIPMNLILDFINDPCWAVQAQCFQLLRNLTCNSRKIVNILLEKFKDVEYKIDP 678

Query: 689 NNGSGEVSGRDESCTQGNQFL-RFLALKLKTVLHDDSYYSDNKIAEALLYIVVNFTAINE 747
             G+          + G+ +L  FLA K++ +   D+     K  E +LYI+VN  A+NE
Sbjct: 679 QTGN--------KISIGSTYLFEFLAKKMRLLNPLDT--QQKKAMEGILYIIVNLAAVNE 728

Query: 748 NKRNLVISQDELLDIVKEYILMAKGDEITK--------ACLWIITNLIWDSSIQHVPYNN 799
           NK+ LVI QDE+L+I+ E ++    D  +         ACLW++ NL+W+SS+ H  Y  
Sbjct: 729 NKKQLVIEQDEILNIMSEILVETTTDSSSNGNDSNLKLACLWVLNNLLWNSSVSH--YTQ 786

Query: 800 SLPENGNPHFDTDWALQEGSSSALEDRNDDPLVRMPLNARASNMSSXXXXXXXXXXXXXX 859
              ENG         L+ G S + +  N    V +  N   +   S              
Sbjct: 787 YAIENG---------LEPGHSPS-DSENPQSTVTIGYNESVAGGYSRGKYYDEPDGDDSS 836

Query: 860 XXXXXXXXXXXXXXXXPHKDFIR-PAT--TTGNISALSPAIIRFKKLDKLGFNDAVKKIL 916
                              +F+R PA   +T N+      + R +KL ++G  D V+K +
Sbjct: 837 SNANDDEDDDNDEGDDEGDEFVRTPAAKGSTSNVQVTRATVERCRKLVEVGLYDLVRKNI 896

Query: 917 DWNGDLDVKERAKTLLYQMETFRK 940
             +  L V+E+A+TLLY M+   K
Sbjct: 897 T-DESLSVREKARTLLYHMDLLLK 919


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.321    0.137    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,984,632
Number of Sequences: 60738
Number of extensions: 2078105
Number of successful extensions: 4961
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4949
Number of HSP's gapped (non-prelim): 4
length of query: 947
length of database: 30,389,216
effective HSP length: 116
effective length of query: 831
effective length of database: 23,343,608
effective search space: 19398538248
effective search space used: 19398538248
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)