ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV3981 good J KOG2309 Translation, ribosomal structure and biogenesis 60s ribosomal protein L2/L8
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV3981 1351335 1350454 -294
(294 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YIL018w [J] KOG2309 60s ribosomal protein L2/L8 462 e-130
YFR031c-a [J] KOG2309 60s ribosomal protein L2/L8 462 e-130
Hs4506663 [J] KOG2309 60s ribosomal protein L2/L8 365 e-101
SPBC839.04 [J] KOG2309 60s ribosomal protein L2/L8 361 e-100
SPBC2F12.07c [J] KOG2309 60s ribosomal protein L2/L8 361 e-100
7292250 [J] KOG2309 60s ribosomal protein L2/L8 360 1e-99
CE18478 [J] KOG2309 60s ribosomal protein L2/L8 342 3e-94
At2g18020 [J] KOG2309 60s ribosomal protein L2/L8 341 6e-94
At4g36130 [J] KOG2309 60s ribosomal protein L2/L8 335 3e-92
At3g51190 [J] KOG2309 60s ribosomal protein L2/L8 327 1e-89
Hs17444499 [J] KOG2309 60s ribosomal protein L2/L8 215 5e-56
ECU01g0310 [J] KOG2309 60s ribosomal protein L2/L8 171 1e-42
Hs17459950 [J] KOG2309 60s ribosomal protein L2/L8 122 5e-28
AtCh087 [J] KOG0438 Mitochondrial/chloroplast ribosomal protein L2 85 1e-16
AtCh063 [J] KOG0438 Mitochondrial/chloroplast ribosomal protein L2 85 1e-16
YEL050c [J] KOG0438 Mitochondrial/chloroplast ribosomal protein L2 77 2e-14
SPCC16C4.15 [J] KOG0438 Mitochondrial/chloroplast ribosomal prot... 63 4e-10
7294756 [J] KOG0438 Mitochondrial/chloroplast ribosomal protein L2 52 1e-06
>YIL018w [J] KOG2309 60s ribosomal protein L2/L8
Length = 254
Score = 462 bits (1189), Expect = e-130
Identities = 226/253 (89%), Positives = 237/253 (93%)
Query: 42 GRVIRNQRKGAGSIFTSHTRLRQGAAKLRNLDYAERHGYIRGVVKQIVHDAGRGAPLAKV 101
GRVIRNQRKGAGSIFTSHTRLRQGAAKLR LDYAERHGYIRG+VKQIVHD+GRGAPLAKV
Sbjct: 2 GRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGIVKQIVHDSGRGAPLAKV 61
Query: 102 VFRDPYKYKLREETFIANEGLHTGQFIYAGKKASLNVGNVLPLGSVPEGTIISNVEERPG 161
VFRDPYKY+LREE FIANEG+HTGQFIYAGKKASLNVGNVLPLGSVPEGTI+SNVEE+PG
Sbjct: 62 VFRDPYKYRLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKPG 121
Query: 162 DRGALARASGNYVIVIGHNPEDNKTRVRLPSGAKKIISSDXXXXXXXXXXXXXXDKPLLK 221
DRGALARASGNYVI+IGHNP++NKTRVRLPSGAKK+ISSD DKPLLK
Sbjct: 122 DRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKVISSDARGVIGVIAGGGRVDKPLLK 181
Query: 222 AGRAFHKYRVKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAAR 281
AGRAFHKYR+KRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAAR
Sbjct: 182 AGRAFHKYRLKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAAR 241
Query: 282 RTGLLRGSQKTQD 294
RTGLLRGSQKTQD
Sbjct: 242 RTGLLRGSQKTQD 254
>YFR031c-a [J] KOG2309 60s ribosomal protein L2/L8
Length = 254
Score = 462 bits (1189), Expect = e-130
Identities = 226/253 (89%), Positives = 237/253 (93%)
Query: 42 GRVIRNQRKGAGSIFTSHTRLRQGAAKLRNLDYAERHGYIRGVVKQIVHDAGRGAPLAKV 101
GRVIRNQRKGAGSIFTSHTRLRQGAAKLR LDYAERHGYIRG+VKQIVHD+GRGAPLAKV
Sbjct: 2 GRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGIVKQIVHDSGRGAPLAKV 61
Query: 102 VFRDPYKYKLREETFIANEGLHTGQFIYAGKKASLNVGNVLPLGSVPEGTIISNVEERPG 161
VFRDPYKY+LREE FIANEG+HTGQFIYAGKKASLNVGNVLPLGSVPEGTI+SNVEE+PG
Sbjct: 62 VFRDPYKYRLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKPG 121
Query: 162 DRGALARASGNYVIVIGHNPEDNKTRVRLPSGAKKIISSDXXXXXXXXXXXXXXDKPLLK 221
DRGALARASGNYVI+IGHNP++NKTRVRLPSGAKK+ISSD DKPLLK
Sbjct: 122 DRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKVISSDARGVIGVIAGGGRVDKPLLK 181
Query: 222 AGRAFHKYRVKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAAR 281
AGRAFHKYR+KRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAAR
Sbjct: 182 AGRAFHKYRLKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAAR 241
Query: 282 RTGLLRGSQKTQD 294
RTGLLRGSQKTQD
Sbjct: 242 RTGLLRGSQKTQD 254
>Hs4506663 [J] KOG2309 60s ribosomal protein L2/L8
Length = 257
Score = 365 bits (936), Expect = e-101
Identities = 171/253 (67%), Positives = 205/253 (80%)
Query: 42 GRVIRNQRKGAGSIFTSHTRLRQGAAKLRNLDYAERHGYIRGVVKQIVHDAGRGAPLAKV 101
GRVIR QRKGAGS+F +H + R+GAA+LR +D+AERHGYI+G+VK I+HD GRGAPLAKV
Sbjct: 2 GRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKV 61
Query: 102 VFRDPYKYKLREETFIANEGLHTGQFIYAGKKASLNVGNVLPLGSVPEGTIISNVEERPG 161
VFRDPY++K R E FIA EG+HTGQF+Y GKKA LN+GNVLP+G++PEGTI+ +EE+PG
Sbjct: 62 VFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPG 121
Query: 162 DRGALARASGNYVIVIGHNPEDNKTRVRLPSGAKKIISSDXXXXXXXXXXXXXXDKPLLK 221
DRG LARASGNY VI HNPE KTRV+LPSG+KK+ISS DKP+LK
Sbjct: 122 DRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILK 181
Query: 222 AGRAFHKYRVKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAAR 281
AGRA+HKY+ KRN WP+ RGVAMNPV+HP GGGNHQHIGK STI R A +G+K GLIAAR
Sbjct: 182 AGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAAR 241
Query: 282 RTGLLRGSQKTQD 294
RTG LRG++ Q+
Sbjct: 242 RTGRLRGTKTVQE 254
>SPBC839.04 [J] KOG2309 60s ribosomal protein L2/L8
Length = 253
Score = 361 bits (927), Expect = e-100
Identities = 171/253 (67%), Positives = 206/253 (80%), Gaps = 1/253 (0%)
Query: 42 GRVIRNQRKGAGSIFTSHTRLRQGAAKLRNLDYAERHGYIRGVVKQIVHDAGRGAPLAKV 101
GRVIR QRK +G IF +HTRLR+GAA+LR LD+AERHGYIRGVV++I+HD GRGAPLAKV
Sbjct: 2 GRVIRAQRK-SGGIFQAHTRLRKGAAQLRTLDFAERHGYIRGVVQKIIHDPGRGAPLAKV 60
Query: 102 VFRDPYKYKLREETFIANEGLHTGQFIYAGKKASLNVGNVLPLGSVPEGTIISNVEERPG 161
FR+PY Y+ ETF+A EG++TGQF+Y GK A+L VGNVLP+G +PEGTIISNVEE+ G
Sbjct: 61 AFRNPYHYRTDVETFVATEGMYTGQFVYCGKNAALTVGNVLPVGEMPEGTIISNVEEKAG 120
Query: 162 DRGALARASGNYVIVIGHNPEDNKTRVRLPSGAKKIISSDXXXXXXXXXXXXXXDKPLLK 221
DRGAL R+SGNYVI++GH+ + KTRV+LPSGAKK++ S DKPLLK
Sbjct: 121 DRGALGRSSGNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIVAGGGRIDKPLLK 180
Query: 222 AGRAFHKYRVKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAAR 281
AGRAFHKYRVKRN WP+TRGVAMNPVDHPHGGGNHQH+G ++T+ R + GQK GLIAAR
Sbjct: 181 AGRAFHKYRVKRNCWPRTRGVAMNPVDHPHGGGNHQHVGHSTTVPRQSAPGQKVGLIAAR 240
Query: 282 RTGLLRGSQKTQD 294
RTGLLRG+ ++
Sbjct: 241 RTGLLRGAAAVEN 253
>SPBC2F12.07c [J] KOG2309 60s ribosomal protein L2/L8
Length = 253
Score = 361 bits (927), Expect = e-100
Identities = 171/253 (67%), Positives = 206/253 (80%), Gaps = 1/253 (0%)
Query: 42 GRVIRNQRKGAGSIFTSHTRLRQGAAKLRNLDYAERHGYIRGVVKQIVHDAGRGAPLAKV 101
GRVIR QRK +G IF +HTRLR+GAA+LR LD+AERHGYIRGVV++I+HD GRGAPLAKV
Sbjct: 2 GRVIRAQRK-SGGIFQAHTRLRKGAAQLRTLDFAERHGYIRGVVQKIIHDPGRGAPLAKV 60
Query: 102 VFRDPYKYKLREETFIANEGLHTGQFIYAGKKASLNVGNVLPLGSVPEGTIISNVEERPG 161
FR+PY Y+ ETF+A EG++TGQF+Y GK A+L VGNVLP+G +PEGTIISNVEE+ G
Sbjct: 61 AFRNPYHYRTDVETFVATEGMYTGQFVYCGKNAALTVGNVLPVGEMPEGTIISNVEEKAG 120
Query: 162 DRGALARASGNYVIVIGHNPEDNKTRVRLPSGAKKIISSDXXXXXXXXXXXXXXDKPLLK 221
DRGAL R+SGNYVI++GH+ + KTRV+LPSGAKK++ S DKPLLK
Sbjct: 121 DRGALGRSSGNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIVAGGGRIDKPLLK 180
Query: 222 AGRAFHKYRVKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAAR 281
AGRAFHKYRVKRN WP+TRGVAMNPVDHPHGGGNHQH+G ++T+ R + GQK GLIAAR
Sbjct: 181 AGRAFHKYRVKRNCWPRTRGVAMNPVDHPHGGGNHQHVGHSTTVPRQSAPGQKVGLIAAR 240
Query: 282 RTGLLRGSQKTQD 294
RTGLLRG+ ++
Sbjct: 241 RTGLLRGAAAVEN 253
>7292250 [J] KOG2309 60s ribosomal protein L2/L8
Length = 256
Score = 360 bits (925), Expect = 1e-99
Identities = 169/249 (67%), Positives = 201/249 (79%)
Query: 42 GRVIRNQRKGAGSIFTSHTRLRQGAAKLRNLDYAERHGYIRGVVKQIVHDAGRGAPLAKV 101
GRVIR QRKGAGS+F +H + R+GAAKLR+LD+AER GYIRGVVK I+HD GRGAPLA V
Sbjct: 2 GRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVV 61
Query: 102 VFRDPYKYKLREETFIANEGLHTGQFIYAGKKASLNVGNVLPLGSVPEGTIISNVEERPG 161
FRDPY+YK+R+E FIA EG+HTGQF+Y G+KA+L +GNV+PL +PEGTII N+EE+ G
Sbjct: 62 HFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTG 121
Query: 162 DRGALARASGNYVIVIGHNPEDNKTRVRLPSGAKKIISSDXXXXXXXXXXXXXXDKPLLK 221
DRG LAR SGNY VI HN + KTRV+LPSGAKK++ S DKP+LK
Sbjct: 122 DRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILK 181
Query: 222 AGRAFHKYRVKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAAR 281
AGRA+HKY+VKRNSWPK RGVAMNPV+HPHGGGNHQHIGKAST+ RG +G+K GLIAAR
Sbjct: 182 AGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAAR 241
Query: 282 RTGLLRGSQ 290
RTG +RG +
Sbjct: 242 RTGRIRGGK 250
>CE18478 [J] KOG2309 60s ribosomal protein L2/L8
Length = 260
Score = 342 bits (878), Expect = 3e-94
Identities = 159/249 (63%), Positives = 193/249 (76%)
Query: 42 GRVIRNQRKGAGSIFTSHTRLRQGAAKLRNLDYAERHGYIRGVVKQIVHDAGRGAPLAKV 101
GR IR QRKGAG IF SH + R+GA+KLR LDYAERHGYI+G+VK I+HD GRGAPLA +
Sbjct: 2 GRRIRIQRKGAGGIFKSHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAII 61
Query: 102 VFRDPYKYKLREETFIANEGLHTGQFIYAGKKASLNVGNVLPLGSVPEGTIISNVEERPG 161
FRDPYKYK + T +A EG+HTGQFI+ G KA + +GN++P+G++PEGT I NVE + G
Sbjct: 62 AFRDPYKYKTVKTTVVAAEGMHTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKSG 121
Query: 162 DRGALARASGNYVIVIGHNPEDNKTRVRLPSGAKKIISSDXXXXXXXXXXXXXXDKPLLK 221
DRG +ARASGNY VI HNP+ KTR+RLPSGAKK++ S DKPLLK
Sbjct: 122 DRGVIARASGNYATVIAHNPDTKKTRIRLPSGAKKVVQSVNRAMIGLVAGGGRTDKPLLK 181
Query: 222 AGRAFHKYRVKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAAR 281
AGR++HKY+ KRNSWP+ RGVAMNPV+HPHGGGNHQHIG ST+ R A +G+K GLIAAR
Sbjct: 182 AGRSYHKYKAKRNSWPRVRGVAMNPVEHPHGGGNHQHIGHPSTVRRDASAGKKVGLIAAR 241
Query: 282 RTGLLRGSQ 290
RTG +RG +
Sbjct: 242 RTGRIRGGK 250
>At2g18020 [J] KOG2309 60s ribosomal protein L2/L8
Length = 258
Score = 341 bits (875), Expect = 6e-94
Identities = 160/247 (64%), Positives = 195/247 (78%)
Query: 42 GRVIRNQRKGAGSIFTSHTRLRQGAAKLRNLDYAERHGYIRGVVKQIVHDAGRGAPLAKV 101
GRVIR QRKGAGS+F SHT R+G AK R+LD+ ER+GY++GVV +I+HD GRGAPLA+V
Sbjct: 2 GRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARV 61
Query: 102 VFRDPYKYKLREETFIANEGLHTGQFIYAGKKASLNVGNVLPLGSVPEGTIISNVEERPG 161
FR P+++K ++E F+A EG++TGQF+Y GKKA+L VGNVLPL S+PEG ++ NVE G
Sbjct: 62 TFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHVG 121
Query: 162 DRGALARASGNYVIVIGHNPEDNKTRVRLPSGAKKIISSDXXXXXXXXXXXXXXDKPLLK 221
DRG LARASG+Y IVI HNP+ + TR++LPSG+KKI+ S +KP+LK
Sbjct: 122 DRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPMLK 181
Query: 222 AGRAFHKYRVKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAAR 281
AG A+HKYRVKRNSWPK RGVAMNPV+HPHGGGNHQHIG AST+ R A GQK GLIAAR
Sbjct: 182 AGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAAR 241
Query: 282 RTGLLRG 288
RTG LRG
Sbjct: 242 RTGRLRG 248
>At4g36130 [J] KOG2309 60s ribosomal protein L2/L8
Length = 258
Score = 335 bits (860), Expect = 3e-92
Identities = 157/247 (63%), Positives = 194/247 (77%)
Query: 42 GRVIRNQRKGAGSIFTSHTRLRQGAAKLRNLDYAERHGYIRGVVKQIVHDAGRGAPLAKV 101
GRVIR QRKGAGS+F SHT R+G AK R+LD+ ER+GY++GVV +I+HD GRGAPLA+V
Sbjct: 2 GRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARV 61
Query: 102 VFRDPYKYKLREETFIANEGLHTGQFIYAGKKASLNVGNVLPLGSVPEGTIISNVEERPG 161
FR P+++K ++E F+A EG++TGQF+Y GKKA+L VGNVLPL S+PEG +I NVE G
Sbjct: 62 AFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHVG 121
Query: 162 DRGALARASGNYVIVIGHNPEDNKTRVRLPSGAKKIISSDXXXXXXXXXXXXXXDKPLLK 221
DRG ARASG+Y IVI HNP+++ +R++LPSG+KKI+ S +KP+LK
Sbjct: 122 DRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPMLK 181
Query: 222 AGRAFHKYRVKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAAR 281
AG A+HKYRVKRN WPK RGVAMNPV+HPHGGGNHQHIG AST+ R A G+K GLIAAR
Sbjct: 182 AGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGKKVGLIAAR 241
Query: 282 RTGLLRG 288
RTG LRG
Sbjct: 242 RTGRLRG 248
>At3g51190 [J] KOG2309 60s ribosomal protein L2/L8
Length = 260
Score = 327 bits (839), Expect = 1e-89
Identities = 158/252 (62%), Positives = 191/252 (75%), Gaps = 1/252 (0%)
Query: 42 GRVIRNQRKGA-GSIFTSHTRLRQGAAKLRNLDYAERHGYIRGVVKQIVHDAGRGAPLAK 100
GRVIR QRKGA GS+F SHT R+G AK R+LDY ER+GY++G+V +I+HD GRGAPLA+
Sbjct: 2 GRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLAR 61
Query: 101 VVFRDPYKYKLREETFIANEGLHTGQFIYAGKKASLNVGNVLPLGSVPEGTIISNVEERP 160
V FR P++Y ++E F+A EG++TGQ++Y GKKA+L VGNVLPLGS+PEG +I NVE
Sbjct: 62 VAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELHV 121
Query: 161 GDRGALARASGNYVIVIGHNPEDNKTRVRLPSGAKKIISSDXXXXXXXXXXXXXXDKPLL 220
GDRGALARASG+Y IVI HNPE N TRV+LPSG+KKI+ S +KP L
Sbjct: 122 GDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPFL 181
Query: 221 KAGRAFHKYRVKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAA 280
KAG A+HKY+ KRN WP RGVAMNPV+HPHGGGNHQHIG AST+ R +G K G IAA
Sbjct: 182 KAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAGAKVGQIAA 241
Query: 281 RRTGLLRGSQKT 292
RRTG RG+ T
Sbjct: 242 RRTGRRRGAAAT 253
>Hs17444499 [J] KOG2309 60s ribosomal protein L2/L8
Length = 239
Score = 215 bits (548), Expect = 5e-56
Identities = 122/253 (48%), Positives = 154/253 (60%), Gaps = 18/253 (7%)
Query: 42 GRVIRNQRKGAGSIFTSHTRLRQGAAKLRNLDYAERHGYIRGVVKQIVHDAGRGAPLAKV 101
G ++ QRKGAG+ F + Q A L + GY + VK +H G GAPLAKV
Sbjct: 2 GLMVCGQRKGAGAAFPA-----QRACAL----WTAPSGY-KSTVKGAIHYPGCGAPLAKV 51
Query: 102 VFRDPYKYKLREETFIANEGLHTGQFIYAGKKASLNVGNVLPLGSVPEGTIISNVEERPG 161
VFR+ K+ + FIA EG+H GQF+Y GKK LN+G+VL + ++PE T + ++E+P
Sbjct: 52 VFRNAPKWT---QLFIAAEGIHMGQFVYCGKKVQLNIGSVLSVDTMPESTTVCCLKEKPE 108
Query: 162 DRGALARASGNYVIVIGHNPEDNKTRVRLPSGAKKIISSDXXXXXXXXXXXXXXDKPLLK 221
DRG LARASGN VI HNPE KT A + DK +LK
Sbjct: 109 DRGKLARASGNGATVISHNPETQKTHE-----AALLRQQANRAVGGVVARGGRNDKAILK 163
Query: 222 AGRAFHKYRVKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAAR 281
AGRA HKY+ KRN WP+ RGVAMN V+HP GGGNHQHIGK STI R A + +K GLIA R
Sbjct: 164 AGRAHHKYKAKRNCWPRVRGVAMNLVEHPFGGGNHQHIGKPSTIRRDAPADRKVGLIAVR 223
Query: 282 RTGLLRGSQKTQD 294
+TG LRG++ Q+
Sbjct: 224 QTGRLRGAKTVQE 236
>ECU01g0310 [J] KOG2309 60s ribosomal protein L2/L8
Length = 239
Score = 171 bits (433), Expect = 1e-42
Identities = 89/211 (42%), Positives = 133/211 (62%), Gaps = 9/211 (4%)
Query: 83 GVVKQIVHDAGRGAPLAKVVFRDPYKYKLREETFI-ANEGLHTGQFIYAGKKASLNVGNV 141
G V IVH+ RGAP+A + F++ ++ + A+EG++TGQ I G A +++GN+
Sbjct: 35 GEVIDIVHERSRGAPVAIISFKE-------DDCMVPASEGMYTGQKILIGDDAPIDIGNI 87
Query: 142 LPLGSVPEGTIISNVEERPGDRGALARASGNYVIVIGHNPEDNKTRVRLPSGAKKIISSD 201
+ +VPEG +++VE GD G A +G+Y +V+ H E N+T +++PSG K +SS+
Sbjct: 88 TKIKNVPEGMAVNSVESVYGDGGTFAMVNGSYSLVVNHRKETNETVIKIPSGKKLTVSSE 147
Query: 202 XXXXXXXXXXXXXXDKPLLKAGRAFHKYRVKRNSWPKTRGVAMNPVDHPHGGGNHQHIGK 261
DKPLLKA A +K + + + +P+ RGVAMNPV+H HGGGNHQH+GK
Sbjct: 148 CRCIVGVVAGGGIHDKPLLKASVAHYKAKARGHVFPRVRGVAMNPVEHIHGGGNHQHVGK 207
Query: 262 ASTISRGAVS-GQKAGLIAARRTGLLRGSQK 291
+T+S+ +S QK GL+ ARRTG GS+K
Sbjct: 208 PTTVSKKDISQEQKIGLVGARRTGYRVGSRK 238
>Hs17459950 [J] KOG2309 60s ribosomal protein L2/L8
Length = 124
Score = 122 bits (307), Expect = 5e-28
Identities = 61/118 (51%), Positives = 75/118 (62%), Gaps = 9/118 (7%)
Query: 156 VEERPGDRGALARASGNYVIVIGHNPEDNKTRVRLPSGAKKIISSDXXXXXXXXXXXXXX 215
+EE+P D G L +ASGNY VI HNPE K+RV+LPSG+KK+ SS
Sbjct: 4 LEEKPRDHGKLTQASGNYATVISHNPETKKSRVKLPSGSKKVTSSANRAVVGVVAGGGQI 63
Query: 216 DKPLLKAGRAFHKYRVKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQ 273
DKP+LKAG A+H+Y+ KRN WP+ RG GGG+HQHIGK STI R A +GQ
Sbjct: 64 DKPILKAGWAYHRYKAKRNCWPQVRG---------GGGGSHQHIGKPSTICRDASAGQ 112
>AtCh087 [J] KOG0438 Mitochondrial/chloroplast ribosomal protein L2
Length = 274
Score = 84.7 bits (208), Expect = 1e-16
Identities = 65/205 (31%), Positives = 91/205 (43%), Gaps = 12/205 (5%)
Query: 50 KGAGSIFTSHTRLRQGAAKLRNLDYAERHGYIRGVVKQIVHDAGRGAPLAKVVFRDPYKY 109
+ A I T+ R R +D+ I G + I +D R A + + + D K
Sbjct: 41 RNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR 100
Query: 110 KLREETFIANEGLHTGQFIYAGKKASLNVGNVLPLGSVPEGTIISNVEERPGDRGALARA 169
+ + G G I +G + + +GN LPL +P GT I N+E G G LARA
Sbjct: 101 YI-----LHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARA 155
Query: 170 SGNYVIVIGHNPEDNKTRVRLPSGAKKIISSDXXXXXXXXXXXXXXDKPLLKAGRAFHKY 229
+G +I E ++LPSG ++IS + K L GRA K
Sbjct: 156 AGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSL---GRAGSKC 210
Query: 230 RVKRNSWPKTRGVAMNPVDHPHGGG 254
+ + P RGV MNPVDHPHGGG
Sbjct: 211 WLGKR--PVVRGVVMNPVDHPHGGG 233
>AtCh063 [J] KOG0438 Mitochondrial/chloroplast ribosomal protein L2
Length = 274
Score = 84.7 bits (208), Expect = 1e-16
Identities = 65/205 (31%), Positives = 91/205 (43%), Gaps = 12/205 (5%)
Query: 50 KGAGSIFTSHTRLRQGAAKLRNLDYAERHGYIRGVVKQIVHDAGRGAPLAKVVFRDPYKY 109
+ A I T+ R R +D+ I G + I +D R A + + + D K
Sbjct: 41 RNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR 100
Query: 110 KLREETFIANEGLHTGQFIYAGKKASLNVGNVLPLGSVPEGTIISNVEERPGDRGALARA 169
+ + G G I +G + + +GN LPL +P GT I N+E G G LARA
Sbjct: 101 YI-----LHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARA 155
Query: 170 SGNYVIVIGHNPEDNKTRVRLPSGAKKIISSDXXXXXXXXXXXXXXDKPLLKAGRAFHKY 229
+G +I E ++LPSG ++IS + K L GRA K
Sbjct: 156 AGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSL---GRAGSKC 210
Query: 230 RVKRNSWPKTRGVAMNPVDHPHGGG 254
+ + P RGV MNPVDHPHGGG
Sbjct: 211 WLGKR--PVVRGVVMNPVDHPHGGG 233
>YEL050c [J] KOG0438 Mitochondrial/chloroplast ribosomal protein L2
Length = 393
Score = 77.4 bits (189), Expect = 2e-14
Identities = 71/236 (30%), Positives = 100/236 (42%), Gaps = 50/236 (21%)
Query: 49 RKGAGSIFTSHTRLRQGAA---KLRNLDYAERHGYIRGVVKQIVHDAGRGAPLAKVVFRD 105
R +G I H QG + R +D+ G + V++I +D GR + +A +
Sbjct: 133 RNNSGKITVRH----QGGGHRNRTRLIDFNRWEGGAQ-TVQRIEYDPGRSSHIALL---- 183
Query: 106 PYKYKLREET--FIANEGLHTGQFIYAGKK----------------ASLNV-----GNVL 142
K+ E IA +GL G + + ++ A L+V GN L
Sbjct: 184 --KHNTTGELSYIIACDGLRPGDVVESFRRGIPQTLLNEMGGKVDPAILSVKTTQRGNCL 241
Query: 143 PLGSVPEGTIISNVEERPGDRGALARASGNYVIVIGHNPEDNKTRVRLPSGAKKIISSDX 202
P+ +P GTII NV P G R++G Y V+ PE K VRL SG + +S +
Sbjct: 242 PISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKKAIVRLQSGEHRYVSLEA 301
Query: 203 XXXXXXXXXXXXXDKPLLKAGRAFHKYRVKRNSW----PKTRGVAMNPVDHPHGGG 254
++ L KAG R+ W P RGVAMN DHPHGGG
Sbjct: 302 VATIGVVSNIDHQNRSLGKAG---------RSRWLGIRPTVRGVAMNKCDHPHGGG 348
>SPCC16C4.15 [J] KOG0438 Mitochondrial/chloroplast ribosomal protein L2
Length = 318
Score = 63.2 bits (152), Expect = 4e-10
Identities = 42/130 (32%), Positives = 57/130 (43%), Gaps = 15/130 (11%)
Query: 135 SLNVGNVLPLGSVPEGTIISNVEERPGDRGALARASGNYVIVIGHNPEDNKTRVRLPSGA 194
+L GN PL +P GT+I + P + L R++G+ +I + VRL SG
Sbjct: 161 NLKPGNCFPLRLIPIGTVIHAIGVNPNQKAKLCRSAGSSARIIAF--DGKYAIVRLQSGE 218
Query: 195 KKIISSDXXXXXXXXXXXXXXDKPLLKAGRAFHKYRVKRNSW----PKTRGVAMNPVDHP 250
++ I + L KAGR+ W P RG AMNP DHP
Sbjct: 219 ERKILDTSFATIGVVSNIYWQHRQLGKAGRS---------RWLGIRPTVRGTAMNPCDHP 269
Query: 251 HGGGNHQHIG 260
HGGG + IG
Sbjct: 270 HGGGGGKSIG 279
>7294756 [J] KOG0438 Mitochondrial/chloroplast ribosomal protein L2
Length = 294
Score = 51.6 bits (122), Expect = 1e-06
Identities = 37/109 (33%), Positives = 54/109 (48%), Gaps = 3/109 (2%)
Query: 84 VVKQIVHDAGRGAPLAKVVFRDPYKYKLREETFIANEGLHTGQFIYAGKKASLNVGNVLP 143
+V +++ D R A +A V D KY L E A + L T +FI N G+ P
Sbjct: 107 LVLEVLRDGCRTAKVALVAVGDELKYILATENMKAGDILKTSRFI-PRIPVRPNEGDAYP 165
Query: 144 LGSVPEGTIISNVEERPGDRGALARASGNYVIVIGHNPEDNKTRVRLPS 192
LG++P GT I +E+ PG L A+G + ++ D K V+LPS
Sbjct: 166 LGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL--RKFDEKVVVQLPS 212
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.320 0.138 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,849,045
Number of Sequences: 60738
Number of extensions: 695690
Number of successful extensions: 1420
Number of sequences better than 1.0e-05: 18
Number of HSP's better than 0.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1390
Number of HSP's gapped (non-prelim): 18
length of query: 294
length of database: 30,389,216
effective HSP length: 106
effective length of query: 188
effective length of database: 23,950,988
effective search space: 4502785744
effective search space used: 4502785744
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)