ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV4028 good U KOG2580 Intracellular trafficking, secretion, and vesicular transport Mitochondrial import inner membrane translocase, subunit TIM44
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV4028 1366245 1364992 -418
(418 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YIL022w [U] KOG2580 Mitochondrial import inner membrane transloc... 633 0.0
SPBC14C8.02 [U] KOG2580 Mitochondrial import inner membrane tran... 326 3e-89
7300484 [U] KOG2580 Mitochondrial import inner membrane transloc... 167 4e-41
Hs5454124 [U] KOG2580 Mitochondrial import inner membrane transl... 139 6e-33
Hs14757910 [U] KOG2580 Mitochondrial import inner membrane trans... 138 2e-32
CE13473 [U] KOG2580 Mitochondrial import inner membrane transloc... 123 6e-28
At2g20510 [U] KOG2580 Mitochondrial import inner membrane transl... 88 3e-17
At2g36070 [U] KOG2580 Mitochondrial import inner membrane transl... 66 8e-11
>YIL022w [U] KOG2580 Mitochondrial import inner membrane translocase subunit
TIM44
Length = 431
Score = 633 bits (1632), Expect = 0.0
Identities = 310/386 (80%), Positives = 353/386 (91%)
Query: 33 NPRSPLQIFRETFKQEWEKSKELQDNIKALQDASGKLGESEAYKKAREAYVKAQKGSTIV 92
NPRSPLQIFR+TFK+EWEKS+ELQ+NIK LQDASGKLGESEAYKKAREAY+KAQ+GSTIV
Sbjct: 46 NPRSPLQIFRDTFKKEWEKSQELQENIKTLQDASGKLGESEAYKKAREAYLKAQRGSTIV 105
Query: 93 GKTLKKTGETVETIASKAWDSEIAKSTRKVVNKTADKLDESFEPVRKTKVYKDVSEVIDD 152
GKTLKKTGET+E IA+KAW+SE+ K+TRK TA KLDESFEPVR+TK+YK+VSEVIDD
Sbjct: 106 GKTLKKTGETMEHIATKAWESELGKNTRKAAAATAKKLDESFEPVRQTKIYKEVSEVIDD 165
Query: 153 GDSSRYGGFITKEQRRLMKEEAIASGKRSRAVKSNDAAGTALVATNIESKESFGKKIEDF 212
G+SSRYGGFITKEQRRL +E +ASGKR RAVKSN+ AGTA+VATNIESKESFGKK+EDF
Sbjct: 166 GESSRYGGFITKEQRRLKRERDLASGKRHRAVKSNEDAGTAVVATNIESKESFGKKVEDF 225
Query: 213 KEKTPVGRKLHEYKIKLWDESENPLVVMLRTVSGKIGGLFAETESARVYGQFKMMDPTFN 272
KEKT VGR + K KLWDESENPL+V++R ++ K+GG FAETES+RVY QFK+MDPTF+
Sbjct: 226 KEKTVVGRSIQSLKNKLWDESENPLIVVMRKITNKVGGFFAETESSRVYSQFKLMDPTFS 285
Query: 273 TEDFTKHLREYIIPEILEAYVKGDEAVLKQWFSEAPYNVYAAQQKQFREQELFADGKILD 332
E FT+HLREYI+PEILEAYVKGD VLK+WFSEAP+NVYAAQQK F+EQ+++ADG+ILD
Sbjct: 286 NESFTRHLREYIVPEILEAYVKGDVKVLKKWFSEAPFNVYAAQQKIFKEQDVYADGRILD 345
Query: 333 IRGVEIVSAKLLPPQDIPVLVVGCRAQEIHLYRKAKTGEIAAGAESSILMSSYAMVFTRD 392
IRGVEIVSAKLL PQDIPVLVVGCRAQEI+LYRK KTGEIAAG E++ILMSSYAMVFTRD
Sbjct: 346 IRGVEIVSAKLLAPQDIPVLVVGCRAQEINLYRKKKTGEIAAGDEANILMSSYAMVFTRD 405
Query: 393 PETVDDKETEGWKILEFVRGGSRQFT 418
PE +DD ETEGWKILEFVRGGSRQFT
Sbjct: 406 PEQIDDDETEGWKILEFVRGGSRQFT 431
>SPBC14C8.02 [U] KOG2580 Mitochondrial import inner membrane translocase subunit
TIM44
Length = 427
Score = 326 bits (836), Expect = 3e-89
Identities = 170/394 (43%), Positives = 264/394 (66%), Gaps = 21/394 (5%)
Query: 34 PRSPLQIFRETFKQEWEKSKELQDNIKALQDASGKLGESEAYKKAREAYVKAQKGST--- 90
P+SP+++F +TF+ E +KS+ELQD++KALQD+SG L ES+ +KKAR+AY KA+ G+T
Sbjct: 32 PQSPIKVFMDTFRAELKKSQELQDSVKALQDSSGSLSESDTFKKARDAYEKARSGTTAAS 91
Query: 91 -IVGKTLKKTGETVETIASKAWDSEIAKSTRKVVNKTADKL----DESFEPVRKTKVYKD 145
GKT+ K G + + A KAW+S + ++KV++ TA+ + D + +PVR+T YK
Sbjct: 92 SFTGKTVGKAGAKIGSYAQKAWESAPVQLSKKVISSTANTVATGVDTATKPVRETAFYKT 151
Query: 146 VSEVIDDGD-SSRYGGFITKEQRRLMKEEAIASGKR---SRAVKSNDAAGTALVATNIES 201
+ + + DG SSRYG + KEQR+ ++EE + S ++ N+ + +V +N
Sbjct: 152 IKQTMSDGSTSSRYGFYADKEQRKKLREEFERRNRMFASSARIQPNEDVQSVVVHSN--- 208
Query: 202 KESFGKKIEDFKEKTPVGRKLHEYKIKLWDESENPLVVMLRTVSGKIGG----LFAETES 257
S+ K+E K ++ + RK+ E K K + ESE+P+V +R ++ I G +F+ETE+
Sbjct: 209 -PSWKNKVEQIKNESRLVRKIQELK-KSYQESEHPIVSSIRDMADSISGVWSRMFSETEA 266
Query: 258 ARVYGQFKMMDPTFNTEDFTKHLREYIIPEILEAYVKGDEAVLKQWFSEAPYNVYAAQQK 317
++V +FK +DP+FNTE F ++LREYI+PE+ EAYVKGD+ VLK W SEAP++VY K
Sbjct: 267 SQVMRRFKEIDPSFNTEHFLQYLREYIVPEVTEAYVKGDKEVLKTWLSEAPFSVYETTTK 326
Query: 318 QFREQELFADGKILDIRGVEIVSAKLLPPQDIPVLVVGCRAQEIHLYRKAKTGEIAAGAE 377
++ + + + GKILDIRGV+I+S +LL P DIPV +V R QE+H+++ A +GE+ AG +
Sbjct: 327 EYAKHGVVSVGKILDIRGVDIMSQRLLQPNDIPVFIVTFRTQEVHMFKDASSGELVAGKD 386
Query: 378 SSILMSSYAMVFTRDPETVDDKETEGWKILEFVR 411
I +YA VFTR + +D+ ET GW+I++F R
Sbjct: 387 DRIQQCTYASVFTRVEDELDNPETRGWRIVDFAR 420
>7300484 [U] KOG2580 Mitochondrial import inner membrane translocase subunit
TIM44
Length = 459
Score = 167 bits (422), Expect = 4e-41
Identities = 110/393 (27%), Positives = 200/393 (49%), Gaps = 26/393 (6%)
Query: 41 FRETFKQEWEKSKELQDNIKALQDASGKLGESEAYKKAREAY----VKAQKGSTIVGKTL 96
F + K E +K+KE++DNI+ ++ + KL ES+A K AR+ + +AQK S+++ + L
Sbjct: 76 FFDNMKAEMDKNKEIKDNIRKFREEAQKLEESDALKSARQKFNIVESEAQKSSSMLKEQL 135
Query: 97 KKTGETVETIASKAWDSEIAKSTRKVVNKTA----DKLDESFEPVRKTKVYKDVSE---- 148
E V + A S +AK + ++K A D + ++ + +T ++ +S
Sbjct: 136 GAIKERVGDVLEDASKSHLAKKVTEELSKKARGVSDTISDTSGKLGQTSAFQAISNTTTT 195
Query: 149 VIDDGDSSRYGGFITKEQRRLMKEEAIASGKRSRAVKSNDAAGTALVATNIESKESFGKK 208
+ + DS+ + + +L K + R V+ N T + F +
Sbjct: 196 IKKEMDSASIENRVYRAPAKLRKRVQLVMSDSDRVVEPN----TEATGMELHKDSKFYES 251
Query: 209 IEDFKEKTPVGRKLHEYKIKLWDESENPLVVMLRTVSGKI----GGLFAETESARVYGQF 264
E+FK K+ ++K+K +DESENP++ R ++ K+ GGLF++TE + +
Sbjct: 252 WENFKNNNTYVNKVLDWKVK-YDESENPVIRASRLLTDKVSDVMGGLFSKTELSETMTEL 310
Query: 265 KMMDPTFNTEDFTKHLREYIIPEILEAYVKGDEAVLKQWFSEAPYNVYAAQQKQFREQEL 324
+DP+F+ +DF + IIP ILE+ V+GD +LK W E+ +N+ A K+ ++ +
Sbjct: 311 VKIDPSFDQKDFLRDCETDIIPNILESIVRGDLEILKDWCFESTFNIIANPIKEAKKAGV 370
Query: 325 FADGKILDIRGVEIVSAKLLPPQDIPVLVVGCRAQEIHLYRKAKTGEIAAGAESSILMSS 384
+ D KILDI +E+ K++ + PVL++ +AQ+I R K+ ++ G ++
Sbjct: 371 YLDSKILDIENIELAMGKVM--EQGPVLIITFQAQQIMCVRDQKS-QVVEGDPEKVMRVH 427
Query: 385 YAMVFTRDPETVDDKETEGWKILEFVRGGSRQF 417
Y V RD ++ K W+++E S QF
Sbjct: 428 YVWVLCRDRNELNPK--AAWRLMELSANSSEQF 458
>Hs5454124 [U] KOG2580 Mitochondrial import inner membrane translocase subunit
TIM44
Length = 452
Score = 139 bits (351), Expect = 6e-33
Identities = 104/396 (26%), Positives = 188/396 (47%), Gaps = 32/396 (8%)
Query: 43 ETFKQEWEKSKELQDNIKALQDASGKLGESEAYKKAREAYVKAQKGSTIVGKTL-KKTGE 101
+ KQE K+KE++++IK +D + +L ES+ ++AR Y + + + L KK GE
Sbjct: 65 DNVKQELAKNKEMKESIKKFRDEARRLEESDVLQEARRKYKTIESETVRTSEVLRKKLGE 124
Query: 102 TVETIASKAWD---SEIAKSTRKVVNKTADKLDESFEPVRK--------------TKVYK 144
T+ + S++ + ++ V + A +S E V K ++ +
Sbjct: 125 LTGTVKESLHEVSKSDLGRKIKEGVEEAAKTAKQSAESVSKGGEKLGRTAAFRALSQGVE 184
Query: 145 DVSEVIDDGDSSRYGGFITKEQRRLMKEEAIASGKRSRAVKSNDAAGTALVATNIESKES 204
V + IDD + G + ++ R E A K + ++N+ A + +
Sbjct: 185 SVKKAIDDSVLGQTGPYRRPQRLRKRTEFAGDKFKEEKVFEANEEA----LGVVLHKDSK 240
Query: 205 FGKKIEDFKEKTPVGRKLHEYKIKLWDESENPLVVMLRTVSGKI----GGLFAETESARV 260
+ ++ +DFKE V + E K+K +DES+N + R ++ K+ GGLF++TE + V
Sbjct: 241 WYQQWKDFKENNVVFNRFFEMKMK-YDESDNAFIRASRALTDKVTDLLGGLFSKTEMSEV 299
Query: 261 YGQFKMMDPTFNTEDFTKHLREYIIPEILEAYVKGDEAVLKQWFSEAPYNVYAAQQKQFR 320
+ +DP F+ + F K IIP +LEA + G+ +LK W EA Y+ A +Q +
Sbjct: 300 LTEILRVDPAFDKDRFLKQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAHPIQQAK 359
Query: 321 EQELFADGKILDIRGVEIVSAKLLPPQDIPVLVVGCRAQEIHLYRKAKTGEIAAGAESSI 380
L +ILDI V++ K++ + PVL++ +AQ + + R K GE+ G +
Sbjct: 360 ALGLQFHSRILDIDNVDLAMGKMM--EQGPVLIITFQAQLVMVVRNPK-GEVVEGDPDKV 416
Query: 381 LMSSYAMVFTRDPETVDDKETEGWKILEFVRGGSRQ 416
L Y RD + ++ W++L+ + Q
Sbjct: 417 LRMLYVWALCRDQDELN--PYAAWRLLDISASSTEQ 450
>Hs14757910 [U] KOG2580 Mitochondrial import inner membrane translocase subunit
TIM44
Length = 452
Score = 138 bits (347), Expect = 2e-32
Identities = 104/396 (26%), Positives = 187/396 (46%), Gaps = 32/396 (8%)
Query: 43 ETFKQEWEKSKELQDNIKALQDASGKLGESEAYKKAREAYVKAQKGSTIVGKTL-KKTGE 101
+ KQE K+KE++++IK +D + +L ES+ ++AR Y + + + L KK GE
Sbjct: 65 DNVKQELAKNKEMKESIKKFRDEARRLEESDVLQEARRKYKTIESETVRTSEVLRKKLGE 124
Query: 102 TVETIASKAWD---SEIAKSTRKVVNKTADKLDESFEPVRK--------------TKVYK 144
T+ + S++ + ++ V + A +S E V K ++ +
Sbjct: 125 LTGTVKESLHEVSKSDLGRKIKEGVEEAAKTAKQSAESVSKGGEKLGRTAAFRALSQGVE 184
Query: 145 DVSEVIDDGDSSRYGGFITKEQRRLMKEEAIASGKRSRAVKSNDAAGTALVATNIESKES 204
V + IDD + G + ++ R E A K + + N+ A + +
Sbjct: 185 SVKKEIDDSVLGQTGPYRRPQRLRKRTEFAGDKFKEEKVFEPNEEA----LGVVLHKDSK 240
Query: 205 FGKKIEDFKEKTPVGRKLHEYKIKLWDESENPLVVMLRTVSGKI----GGLFAETESARV 260
+ ++ +DFKE V + E K+K +DES+N + R ++ K+ GGLF++TE + V
Sbjct: 241 WYQQWKDFKENNVVFNRFFEMKMK-YDESDNAFIRASRALTDKVTDLLGGLFSKTEMSEV 299
Query: 261 YGQFKMMDPTFNTEDFTKHLREYIIPEILEAYVKGDEAVLKQWFSEAPYNVYAAQQKQFR 320
+ +DP F+ + F K IIP +LEA + G+ +LK W EA Y+ A +Q +
Sbjct: 300 LTEILRVDPAFDKDRFLKQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAHPIQQAK 359
Query: 321 EQELFADGKILDIRGVEIVSAKLLPPQDIPVLVVGCRAQEIHLYRKAKTGEIAAGAESSI 380
L +ILDI V++ K++ + PVL++ +AQ + + R K GE+ G +
Sbjct: 360 ALGLQFHSRILDIDNVDLAMGKMM--EQGPVLIITFQAQLVMVVRNPK-GEVVEGDPDKV 416
Query: 381 LMSSYAMVFTRDPETVDDKETEGWKILEFVRGGSRQ 416
L Y RD + ++ W++L+ + Q
Sbjct: 417 LRMLYVWALCRDQDELN--PYAAWRLLDISASSTEQ 450
>CE13473 [U] KOG2580 Mitochondrial import inner membrane translocase subunit
TIM44
Length = 425
Score = 123 bits (308), Expect = 6e-28
Identities = 111/409 (27%), Positives = 201/409 (49%), Gaps = 43/409 (10%)
Query: 26 VSAKAMSNP---RSPLQIFRETFKQEWEKSKELQDNIKALQDASGKLGESEAYKKAREAY 82
V+ + SNP R L + + E +K+KELQ++ + L+ +L ES+A K AR+ +
Sbjct: 24 VTFRDYSNPAPKRGFLNNLIDNVRDEMQKNKELQEHQQQLKARMQELNESDALKDARKKF 83
Query: 83 VKAQK----GSTIVGKTLKKTGETVETIASKAWDSEIAKSTR-------KVVNKTADKLD 131
+K S +V + +++ + ++ + + +E K K K A+ ++
Sbjct: 84 EIVEKETLKSSEVVKQKIEELSDHMKKMVHEIQKTEAGKKMTEAGAEALKQARKAAEHVE 143
Query: 132 ESFEPVRKTKVYKDVSE----VIDDGDSSRYGGFITKEQRRLMKEEAIASG------KRS 181
+ E V T+VYK VS V D+ D+ + R + EA+ ++
Sbjct: 144 KVAEKVGDTEVYKHVSTSMKTVKDEIDN-------IADVRMYSRPEALTKRTDGFDLEKE 196
Query: 182 RAVKSNDAAGTALVATNIESKESFGKKIEDFKEKTPVGRKLHEYKIKLWDESENPLVVML 241
R V++ND+A V + +SK G K +F E KL ++KIK +DES+N V M+
Sbjct: 197 RVVEANDSATD--VTLHKDSKWYSGWK--NFSESNTYYHKLLDWKIK-YDESDNMAVRMM 251
Query: 242 RTVSGKIGGLFA-ETESARVYGQFKMMDPTFNTEDFTKHLREYIIPEILEAYVKGDEAVL 300
R V+ KIG +F+ + E + V + +D F+ +++ + IIP ILEA+++ D VL
Sbjct: 252 RGVTEKIGSVFSGQNEVSEVLTEIHKIDANFDKQEWLRFCETKIIPNILEAFIRFDLEVL 311
Query: 301 KQWFSEAPYNVYAAQQKQFREQELFA-DGKILDIRGVEIVSAKLLPPQDIPVLVVGCRAQ 359
+ W E Y + K++++ D +I+DI VE+ + K++ + PVL++ +
Sbjct: 312 QSWCHERAYTQLSTVVKEYQKMHFSTKDSRIIDINKVEMATGKMM--EQGPVLIISFQVY 369
Query: 360 EIHLYRKAKTGEIAAGAESSILMSSYAMVFTRDPETVDDKETEGWKILE 408
I++ + A G++ G + ++ V RD E + WK+LE
Sbjct: 370 MINVTKNA-DGKVVEGDPDNPKRINHIWVLCRDVE--EYNPALAWKLLE 415
>At2g20510 [U] KOG2580 Mitochondrial import inner membrane translocase subunit
TIM44
Length = 533
Score = 87.8 bits (216), Expect = 3e-17
Identities = 101/423 (23%), Positives = 188/423 (43%), Gaps = 52/423 (12%)
Query: 26 VSAKAMSNPRSPLQIFRETFKQEWEKSKELQDNIKALQDASGKLGESEAYKKAREAYVKA 85
+ +A SNP F T K+ E+++E + + L+ + + E + YK+A V
Sbjct: 123 IRGEAHSNPE-----FERTVKELKERTEEFKGVTEDLKVRTKQTTE-KLYKQADALTV-- 174
Query: 86 QKGSTIVGKTLKKTGETVETIA-SKAWDSEIAKST-------RKVVNKTADKLDESFEPV 137
Q S++ K + E E+ K ++E A S+ K + + ++L F
Sbjct: 175 QVSSSVKDKLSAASEEVKESFKLGKEENAESASSSGTRASQGEKQQSGSTEELHTFFAKF 234
Query: 138 RKTKVYKDVSEVIDDGDSSRYGGFITKEQRRLMKEEAIASGKRSRAVKSND--------A 189
+ + VSEV ++ I K+ ++K+E + R + ++ +
Sbjct: 235 KSSLSSPKVSEVFYRLKEAKPFD-IVKQALDIVKDELRGNPSRKKFLEHTPPPPFTGERS 293
Query: 190 AGTALVATNIESKESFGKKIEDFKEK---TPVGRKLH--------------EYKIKLWDE 232
T +V T + + +K E F+EK +PV ++L E ++W+
Sbjct: 294 MRTEMVVTQTKQSK-LQQKWESFREKMQGSPVFKRLSGMSEPVVNKSQEIAEDVREIWET 352
Query: 233 SENPLVVMLRTVSGKIGGLFAETESARVYGQFKMMDPTFNTEDFTKHLREYIIPEILEAY 292
S+NP+V ++ ++ K ET+SA Y + + DP+F+ DF + E I P +L AY
Sbjct: 353 SDNPIVHKIQDMNEKF---LKETDSASTYKEIRSRDPSFSLPDFAAEIEEVIKP-VLNAY 408
Query: 293 VKGDEAVLKQWFSEAPYNVYAAQQKQFREQELFADGKILDIRGVEIVSAKLLPPQDIPVL 352
+GD LK++ S+ A++ ++ + D K+L I V + K++ D P++
Sbjct: 409 SEGDVETLKKYCSKEVIERCTAERTAYQTHGVLFDNKLLHISEVSVSVTKMM--GDSPII 466
Query: 353 VVGCRAQEIHLYRKAKTGEIAAGAESSI--LMSSYAMVFTRDPETVDDKETEGWKILEFV 410
+ + QEI+ R + GEI G + +I + +AM E +D W++ E
Sbjct: 467 IAKFQTQEIYCVRD-ENGEIQEGGQDTIHTVYHEWAMQQVETTELGEDAIYPIWRLREMC 525
Query: 411 RGG 413
R G
Sbjct: 526 RNG 528
>At2g36070 [U] KOG2580 Mitochondrial import inner membrane translocase subunit
TIM44
Length = 499
Score = 66.2 bits (160), Expect = 8e-11
Identities = 90/400 (22%), Positives = 168/400 (41%), Gaps = 40/400 (10%)
Query: 26 VSAKAMSNPRSPLQIFRETFKQEWEKSKELQDNIKALQDASGKLGESEAYKKAREAYVKA 85
+ +A SNP F++T K+ E+++ELQ +K K + YK+ + + +A
Sbjct: 123 IRGEADSNPE-----FQKTVKEFKERAEELQ-GVKEDLKVRTKQTTEKLYKQGQGVWTEA 176
Query: 86 QKGSTIVGKTLKKTGETVETIASKAWDSEIAKSTRKVVNKTADKLDESFEPVRKTKVYKD 145
+ + V ++ K E AS + ++ + + ++ D F + +
Sbjct: 177 ESVAKKVKESFKLGKEESAESASSSGTGTTEGEKQQQQSGSTEEQDTFFGKFKSSISSPK 236
Query: 146 VSEVIDDG-DSSRYGGFITKEQRRLMKEEAIASGKRSRAVKSNDAAGTALVATNIE---- 200
+SE D ++ G I K++ R KR + T +T E
Sbjct: 237 LSEAFHKPLDFAKKGLDIVKDELRGNPS------KRKHLEYTPPPPFTGERSTRTEMVIM 290
Query: 201 --SKESFGKKIEDFKEKT---PVGRKLHEYKIKLWDESENPLVVMLRTVSGKIGGLFAET 255
+ + KK E +EK PV ++L P+V + ++ + + +
Sbjct: 291 PTKQSKWQKKWESLREKMQGYPVFKRL--------SGMSEPVVNKSQEIAEDVREKWETS 342
Query: 256 ESARVYGQFKMMDPTFNTEDFTKHLREYIIPEILEAYVKGDEAVLKQWFSEAPYNVYAAQ 315
++ V+ + +F+ DF ++E I P +L AY KGD LK++ S+ A+
Sbjct: 343 DNPIVH----KIQESFSLPDFVSEIQEAIRP-VLNAYSKGDAKTLKKYCSKELIERCTAE 397
Query: 316 QKQFREQELFADGKILDIRGVEIVSAKLLPPQDIPVLVVGCRAQEIHLYRKAKTGEIAAG 375
+ F Q F D K+L + V+I K++ PV++V + QEI R + G+I G
Sbjct: 398 HRAFTSQGYFFDHKLLHVSEVDIQETKMM--GTTPVIIVRFQTQEIFCVRD-QDGKIKEG 454
Query: 376 AESSI--LMSSYAMVFTRDPETVDDKETEGWKILEFVRGG 413
+ +I + +AM E +D W++ E +R G
Sbjct: 455 GQDTIHTVYYDWAMQQVDAAELGEDAIYPIWRLREMLRAG 494
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.313 0.130 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,989,877
Number of Sequences: 60738
Number of extensions: 939715
Number of successful extensions: 2766
Number of sequences better than 1.0e-05: 8
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2740
Number of HSP's gapped (non-prelim): 8
length of query: 418
length of database: 30,389,216
effective HSP length: 109
effective length of query: 309
effective length of database: 23,768,774
effective search space: 7344551166
effective search space used: 7344551166
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)