ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV4158 good R KOG1677 General function prediction only CCCH-type Zn-finger protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV4158 1411379 1410450 -310
(310 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDR151c [R] KOG1677 CCCH-type Zn-finger protein 191 1e-48
YLR136c [R] KOG1677 CCCH-type Zn-finger protein 174 2e-43
Hs15812178 [R] KOG1677 CCCH-type Zn-finger protein 87 3e-17
7292800 [R] KOG1677 CCCH-type Zn-finger protein 86 7e-17
Hs15812180 [R] KOG1677 CCCH-type Zn-finger protein 86 9e-17
SPBC1718.07c [R] KOG1677 CCCH-type Zn-finger protein 84 2e-16
ECU01g0830 [R] KOG1677 CCCH-type Zn-finger protein 81 2e-15
Hs4507961 [R] KOG1677 CCCH-type Zn-finger protein 79 1e-14
CE20757 [R] KOG1677 CCCH-type Zn-finger protein 76 7e-14
CE20756 [R] KOG1677 CCCH-type Zn-finger protein 76 7e-14
CE07613 [R] KOG1677 CCCH-type Zn-finger protein 71 2e-12
CE18657 [R] KOG1677 CCCH-type Zn-finger protein 67 4e-11
CE16006 [R] KOG1677 CCCH-type Zn-finger protein 66 7e-11
CE23329 [R] KOG1677 CCCH-type Zn-finger protein 65 1e-10
CE23326 [R] KOG1677 CCCH-type Zn-finger protein 65 1e-10
At1g68200 [R] KOG1677 CCCH-type Zn-finger protein 65 2e-10
CE15683 [R] KOG1677 CCCH-type Zn-finger protein 64 2e-10
CE16004 [R] KOG1677 CCCH-type Zn-finger protein 64 3e-10
CE28097 [R] KOG1677 CCCH-type Zn-finger protein 64 4e-10
CE04629 [R] KOG1677 CCCH-type Zn-finger protein 63 5e-10
CE14978 [R] KOG1677 CCCH-type Zn-finger protein 63 6e-10
At1g66810 [R] KOG1677 CCCH-type Zn-finger protein 62 8e-10
CE03005 [R] KOG1677 CCCH-type Zn-finger protein 61 2e-09
CE23328 [R] KOG1677 CCCH-type Zn-finger protein 60 3e-09
CE22669 [R] KOG1677 CCCH-type Zn-finger protein 58 2e-08
CE21237 [R] KOG1677 CCCH-type Zn-finger protein 57 3e-08
CE26846 [R] KOG1677 CCCH-type Zn-finger protein 55 1e-07
>YDR151c [R] KOG1677 CCCH-type Zn-finger protein
Length = 325
Score = 191 bits (485), Expect = 1e-48
Identities = 115/313 (36%), Positives = 154/313 (48%), Gaps = 48/313 (15%)
Query: 27 NEDYDARIREIEEYYIKTLLNDDAGDDGLSKXXXXXXXXXXXXXXXXNLFSRSSFGTVPQ 86
N++Y+++I+EIEEYYIKTLLN++ +D S +S +P
Sbjct: 32 NKEYESKIKEIEEYYIKTLLNENTDNDDSSSSEGHNINETDILSE----YSPRPSPWLPS 87
Query: 87 SQNKELAXXXXXXXXXXXXXXXXXRPIFEYQDPWP----------QKVHPKEPSLEVEIN 136
N PI +P+ + K+ SLEVEIN
Sbjct: 88 KPNCYHPLGDFKDLIISDSRPTNTLPI---NNPFAGNNNISTLATTEKKRKKRSLEVEIN 144
Query: 137 SQYRPANGIMPLTSENLRIIQETPAEPVVHAQAQAPTEHVHTENCGHNHPQVSXXXXXXX 196
Y + +PLT+ENL+ + + ++ + E C Q+
Sbjct: 145 PTYTTSAFSLPLTAENLQKLSQVDSQSTGLPYTLPIQKTTKLEPCRRAPLQL-------- 196
Query: 197 XXXXPERVNKQLYKTELCESFATKGTCKYGNKCQFAHGLHELKIKERSNNFRTKPCVNWQ 256
P+ VNK LYKTELCESF KG CKYGNKCQFAHGL+ELK K++SNN+RTKPC+NW
Sbjct: 197 ----PQLVNKTLYKTELCESFTIKGYCKYGNKCQFAHGLNELKFKKKSNNYRTKPCINWS 252
Query: 257 KYGYCRYGKRCCFKHGDDEDIQVYMKVNMIK-------------------KIEDEPIRKN 297
K GYC YGKRCCFKHGDD+D+++Y N + I + +N
Sbjct: 253 KLGYCPYGKRCCFKHGDDKDVEIYQNANDGRSKDTALTPLPTSLAPSNNDNITNLSKPRN 312
Query: 298 LHADVKALQKMTW 310
LH VKALQ+MTW
Sbjct: 313 LHTSVKALQRMTW 325
>YLR136c [R] KOG1677 CCCH-type Zn-finger protein
Length = 285
Score = 174 bits (440), Expect = 2e-43
Identities = 117/309 (37%), Positives = 149/309 (47%), Gaps = 86/309 (27%)
Query: 30 YDARIREIEEYYIKTLLNDDAGDDGLSKXXXXXXXXXXXXXXXXNLFSRSSFGTVPQSQN 89
Y IRE+EEYY KT+LN+D + S+ + S SF P++ N
Sbjct: 35 YQINIRELEEYYNKTILNEDNIQETSSE-----------------ISSAVSFSP-PKNTN 76
Query: 90 KELAXXXXXXXXXXXXXXXXXRPIFEYQDPWPQKVHPKEPS--------------LEVEI 135
+P Y PQ ++P PS LEV+I
Sbjct: 77 -------------------AIQPGLLYD---PQLMNPFLPSAHLNSTAPTTFKKKLEVQI 114
Query: 136 NSQYRPANGIMPLTSENLRIIQETPAEPVVHAQAQAPTEHVHTENCGHNHPQVSXXXXXX 195
N Y P + +PLTS+NL+ + + Q +E P+V
Sbjct: 115 NPDYVPKSSQLPLTSQNLQQLSQ---------QKPKNDASFSSEKESSAQPKVKSQV--- 162
Query: 196 XXXXXPERVNKQLYKTELCESFATKGTCKYGNKCQFAHGLHELKIKERSNNFRTKPCVNW 255
+ KQLYKTELCESF KG+C YG+KCQFAHGL ELK+K+ NFRTKPCVNW
Sbjct: 163 ------QETPKQLYKTELCESFTLKGSCPYGSKCQFAHGLGELKVKKSCKNFRTKPCVNW 216
Query: 256 QKYGYCRYGKRCCFKHGDDEDIQVYMK------VNMIKKIEDE--------PIRKNLHAD 301
+K GYC YG+RCCFKHGDD DI VY+K V+ K DE +KNL+
Sbjct: 217 EKLGYCPYGRRCCFKHGDDNDIAVYVKAGTYCNVSSTSKQSDEKRSNGRGSAKKKNLNVK 276
Query: 302 VKALQKMTW 310
VKALQ+MTW
Sbjct: 277 VKALQRMTW 285
>Hs15812178 [R] KOG1677 CCCH-type Zn-finger protein
Length = 494
Score = 87.0 bits (214), Expect = 3e-17
Identities = 37/73 (50%), Positives = 45/73 (60%)
Query: 203 RVNKQLYKTELCESFATKGTCKYGNKCQFAHGLHELKIKERSNNFRTKPCVNWQKYGYCR 262
++N YKTELC F GTCKYG KCQFAHG HEL+ R ++T+ C + G+C
Sbjct: 148 QINSTRYKTELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHPKYKTELCRTFHTIGFCP 207
Query: 263 YGKRCCFKHGDDE 275
YG RC F H DE
Sbjct: 208 YGPRCHFIHNADE 220
>7292800 [R] KOG1677 CCCH-type Zn-finger protein
Length = 448
Score = 85.9 bits (211), Expect = 7e-17
Identities = 47/139 (33%), Positives = 65/139 (45%), Gaps = 2/139 (1%)
Query: 139 YRPANGIMPLTSENLRIIQETPAEPVVHAQAQAPTEHVHT--ENCGHNHPQVSXXXXXXX 196
+R G+ S+ ++IQ+ + Q Q + T EN G+ +
Sbjct: 66 HRHHGGLTRTISQPAQLIQQQQQQHQQQQQQQPAVASLVTITENLGNMNLHRKLERTQSE 125
Query: 197 XXXXPERVNKQLYKTELCESFATKGTCKYGNKCQFAHGLHELKIKERSNNFRTKPCVNWQ 256
+ +N YKTELC F G CKYG KCQFAHG HEL+ R ++T+ C +
Sbjct: 126 PLPPQQPMNTSRYKTELCRPFEEAGECKYGEKCQFAHGSHELRNVHRHPKYKTEYCRTFH 185
Query: 257 KYGYCRYGKRCCFKHGDDE 275
G+C YG RC F H DE
Sbjct: 186 SVGFCPYGPRCHFVHNADE 204
>Hs15812180 [R] KOG1677 CCCH-type Zn-finger protein
Length = 338
Score = 85.5 bits (210), Expect = 9e-17
Identities = 36/73 (49%), Positives = 46/73 (62%)
Query: 203 RVNKQLYKTELCESFATKGTCKYGNKCQFAHGLHELKIKERSNNFRTKPCVNWQKYGYCR 262
+VN YKTELC F G CKYG+KCQFAHG+HEL+ R ++T+ C + G+C
Sbjct: 109 QVNSSRYKTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHPKYKTELCRTFHTIGFCP 168
Query: 263 YGKRCCFKHGDDE 275
YG RC F H +E
Sbjct: 169 YGPRCHFIHNAEE 181
>SPBC1718.07c [R] KOG1677 CCCH-type Zn-finger protein
Length = 404
Score = 84.3 bits (207), Expect = 2e-16
Identities = 34/68 (50%), Positives = 47/68 (69%)
Query: 206 KQLYKTELCESFATKGTCKYGNKCQFAHGLHELKIKERSNNFRTKPCVNWQKYGYCRYGK 265
+ LYKTE C+++ GTC+YG+KCQFAHG ELK R ++++ C ++ YGYC YG
Sbjct: 324 RALYKTEPCKNWQISGTCRYGSKCQFAHGNQELKEPPRHPKYKSERCRSFMMYGYCPYGL 383
Query: 266 RCCFKHGD 273
RCCF H +
Sbjct: 384 RCCFLHDE 391
>ECU01g0830 [R] KOG1677 CCCH-type Zn-finger protein
Length = 346
Score = 80.9 bits (198), Expect = 2e-15
Identities = 35/71 (49%), Positives = 46/71 (64%)
Query: 207 QLYKTELCESFATKGTCKYGNKCQFAHGLHELKIKERSNNFRTKPCVNWQKYGYCRYGKR 266
QLYKTE+C S G C+YG+KCQFAH EL+ +R ++T+ C + + G C YGKR
Sbjct: 111 QLYKTEMCRSHTEIGYCRYGDKCQFAHSKAELRYVQRHPKYKTETCKTFWEEGSCPYGKR 170
Query: 267 CCFKHGDDEDI 277
CCF H + DI
Sbjct: 171 CCFIHIPNTDI 181
>Hs4507961 [R] KOG1677 CCCH-type Zn-finger protein
Length = 326
Score = 78.6 bits (192), Expect = 1e-14
Identities = 34/69 (49%), Positives = 43/69 (62%)
Query: 209 YKTELCESFATKGTCKYGNKCQFAHGLHELKIKERSNNFRTKPCVNWQKYGYCRYGKRCC 268
YKTELC +F+ G C+YG KCQFAHGL EL+ R ++T+ C + G C YG RC
Sbjct: 104 YKTELCRTFSESGRCRYGAKCQFAHGLGELRQANRHPKYKTELCHKFYLQGRCPYGSRCH 163
Query: 269 FKHGDDEDI 277
F H ED+
Sbjct: 164 FIHNPSEDL 172
>CE20757 [R] KOG1677 CCCH-type Zn-finger protein
Length = 373
Score = 75.9 bits (185), Expect = 7e-14
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Query: 160 PAEPVVHAQAQAPTEHVHTENCGHNHPQVSXXXXXXXXXXXPERVNKQLYKTELCESFAT 219
P P+ + +++ + + ++ PQ++ P+ N +LYKTELC S+
Sbjct: 111 PGTPIGSQHQMSIGQNLVSASSPYSTPQLTPMATPNGQAPPPK--NPKLYKTELCRSWMD 168
Query: 220 KGTCKYGNKCQFAHGLHELKIKERSNNFRTKPCVNWQKYGYCRYGKRCCFKHGDDEDIQ 278
G C YG +CQ+AHG E + R ++T+ C ++ + GYC YG RC F H + Q
Sbjct: 169 HGRCNYGERCQYAHGELEKRPVPRHPKYKTEACQSFHQSGYCPYGPRCHFIHNEPPSAQ 227
>CE20756 [R] KOG1677 CCCH-type Zn-finger protein
Length = 414
Score = 75.9 bits (185), Expect = 7e-14
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Query: 160 PAEPVVHAQAQAPTEHVHTENCGHNHPQVSXXXXXXXXXXXPERVNKQLYKTELCESFAT 219
P P+ + +++ + + ++ PQ++ P+ N +LYKTELC S+
Sbjct: 152 PGTPIGSQHQMSIGQNLVSASSPYSTPQLTPMATPNGQAPPPK--NPKLYKTELCRSWMD 209
Query: 220 KGTCKYGNKCQFAHGLHELKIKERSNNFRTKPCVNWQKYGYCRYGKRCCFKHGDDEDIQ 278
G C YG +CQ+AHG E + R ++T+ C ++ + GYC YG RC F H + Q
Sbjct: 210 HGRCNYGERCQYAHGELEKRPVPRHPKYKTEACQSFHQSGYCPYGPRCHFIHNEPPSAQ 268
>CE07613 [R] KOG1677 CCCH-type Zn-finger protein
Length = 393
Score = 70.9 bits (172), Expect = 2e-12
Identities = 50/162 (30%), Positives = 73/162 (44%), Gaps = 17/162 (10%)
Query: 124 VHPKEPSL-EVEINSQYRPANGIMPLTSE--NLRIIQETPAEPVVHAQAQAPTEHVHTEN 180
V P P + E Q +P + I L SE NL ++E + + A EH+H+
Sbjct: 20 VEPSHPDMMETVPEEQQKPISHIDDLLSETANLMAVKEQLLKEI------AENEHIHSMQ 73
Query: 181 CGHNHPQVSXXXXXXXXXXXPERVNK----QLYKTELCESFATKGTCKYGNKCQFAHGLH 236
P R ++ + YKT +C+++ TC + C+FAHG
Sbjct: 74 MRALQNLPQEAILPLQYHADPRRRHRMQKPESYKTVICQAWLESKTCAFAENCRFAHGEE 133
Query: 237 ELK---IKERSNN-FRTKPCVNWQKYGYCRYGKRCCFKHGDD 274
EL+ I+ R NN +RTK C + G C YGKRC F H D+
Sbjct: 134 ELRPSLIEARQNNKYRTKLCDKYTTTGLCPYGKRCLFIHPDN 175
>CE18657 [R] KOG1677 CCCH-type Zn-finger protein
Length = 367
Score = 66.6 bits (161), Expect = 4e-11
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 209 YKTELCESFATKGTCKYGNKCQFAHGLHEL---KIKERSNN-FRTKPCVNWQKYGYCRYG 264
YKT +C+++ TC + C+FAHG EL K++ R NN ++TK C + G C YG
Sbjct: 131 YKTVICQAWLESKTCTFAENCRFAHGEEELRPAKLESRQNNKYKTKLCDKYTTTGLCPYG 190
Query: 265 KRCCFKHGDDEDIQVYMKVNMIKKIEDEPIRKNLHADVKA 304
KRC F H D++ Y++ + + ++ +L V++
Sbjct: 191 KRCLFIHPDNQP-NAYIRADKLYEVSQRHALADLRDHVES 229
>CE16006 [R] KOG1677 CCCH-type Zn-finger protein
Length = 203
Score = 65.9 bits (159), Expect = 7e-11
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 206 KQLYKTELCESFATKGTCKYGNKCQFAHGLHELKI---KERSNNFRTKPCVNWQKYGYCR 262
++ +KT LC C YG KC+FAH +HEL+ K N++T C N+ G+C+
Sbjct: 86 EEAFKTSLCGFHRRGQKCAYGEKCKFAHSVHELRFPQTKRNHRNYKTVLCNNFSTTGHCK 145
Query: 263 YGKRCCFKHGDDEDIQVYMKVNMIKKIEDEPIRKNLHADV 302
YG RC F H N K+E+ I N+ +DV
Sbjct: 146 YGIRCQFIHRSMNS----TSSNQSNKMENITIDLNVQSDV 181
>CE23329 [R] KOG1677 CCCH-type Zn-finger protein
Length = 201
Score = 65.5 bits (158), Expect = 1e-10
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 209 YKTELCESFATKGTCKYGNKCQFAHGLHELK---IKERSNNFRTKPCVNWQKYGYCRYGK 265
+KT LC S TC YG +C+FAHG+HEL+ K+ N++T C + GYC+YG
Sbjct: 89 FKTALCLSHKRGKTCIYGEQCKFAHGVHELRCQQAKKNHRNYKTVLCDKFTTTGYCKYGI 148
Query: 266 RCCFKH 271
RC F H
Sbjct: 149 RCQFIH 154
>CE23326 [R] KOG1677 CCCH-type Zn-finger protein
Length = 205
Score = 65.5 bits (158), Expect = 1e-10
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 206 KQLYKTELCESFATKGTCKYGNKCQFAHGLHELKIKERS---NNFRTKPCVNWQKYGYCR 262
++ +KT LC S TC YG C+FAHG+HEL+ ++ + N++T C + GYC+
Sbjct: 90 EKAFKTSLCLSHKRGKTCIYGEACKFAHGVHELRCQQTTRNHRNYKTVLCDKFTTTGYCK 149
Query: 263 YGKRCCFKH 271
YG RC F H
Sbjct: 150 YGARCQFIH 158
>At1g68200 [R] KOG1677 CCCH-type Zn-finger protein
Length = 308
Score = 64.7 bits (156), Expect = 2e-10
Identities = 31/74 (41%), Positives = 41/74 (54%)
Query: 202 ERVNKQLYKTELCESFATKGTCKYGNKCQFAHGLHELKIKERSNNFRTKPCVNWQKYGYC 261
E N+ + KTELC + GTC YG+ CQFAHG+ EL+ R ++T+ C C
Sbjct: 216 EVYNQGMTKTELCNKWQETGTCPYGDHCQFAHGIKELRPVIRHPRYKTEVCRMVLAGDNC 275
Query: 262 RYGKRCCFKHGDDE 275
YG RC F+H E
Sbjct: 276 PYGHRCHFRHSLSE 289
>CE15683 [R] KOG1677 CCCH-type Zn-finger protein
Length = 203
Score = 64.3 bits (155), Expect = 2e-10
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 206 KQLYKTELCESFATKGTCKYGNKCQFAHGLHELKI---KERSNNFRTKPCVNWQKYGYCR 262
++ +KT LC C YG KC+FAH +HEL+ K N++T C N+ G+C+
Sbjct: 86 EEAFKTSLCGFHRRGQKCAYGEKCKFAHSVHELRFPQTKRNHRNYKTVLCNNFSTTGHCK 145
Query: 263 YGKRCCFKHGDDEDIQVYMKVNMIKKIEDEPIRKNLHADV 302
YG RC F H + N + E+ I N+ +DV
Sbjct: 146 YGIRCQFIHRSMDS----TSSNQSNETENITIDLNVQSDV 181
>CE16004 [R] KOG1677 CCCH-type Zn-finger protein
Length = 186
Score = 63.9 bits (154), Expect = 3e-10
Identities = 25/68 (36%), Positives = 43/68 (62%), Gaps = 5/68 (7%)
Query: 209 YKTELCESFATKGTCKYGNKCQFAHGLHELKIKERSN-----NFRTKPCVNWQKYGYCRY 263
+KT LC++F C YG +C+FAH + EL++K+++ ++T C N+ + G+C+Y
Sbjct: 73 FKTALCKTFQLTRACSYGEQCKFAHSVEELQLKQKNRGVNHPKYKTVLCDNFSRTGHCKY 132
Query: 264 GKRCCFKH 271
G +C F H
Sbjct: 133 GTKCQFIH 140
>CE28097 [R] KOG1677 CCCH-type Zn-finger protein
Length = 494
Score = 63.5 bits (153), Expect = 4e-10
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 202 ERVNKQLYKTELCESFATKGTCKYGNKCQFAHGLHELKIKERSN-----NFRTKPCVNWQ 256
++ ++ +KT LC++F G+C YG C+FAHG +EL++ + ++T+ C +
Sbjct: 132 QKRKEEAFKTALCDAFKRSGSCPYGEACRFAHGENELRMPSQPRGKAHPKYKTQLCDKFS 191
Query: 257 KYGYCRYGKRCCFKH 271
+G C YG RC F H
Sbjct: 192 NFGQCPYGPRCQFIH 206
>CE04629 [R] KOG1677 CCCH-type Zn-finger protein
Length = 264
Score = 63.2 bits (152), Expect = 5e-10
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 202 ERVNKQLYKTELCESFATKGTCKYGNKCQFAHGLHELKI--KERSNN---FRTKPCVNWQ 256
+R + +KT LC+++ C YG++C+FAHG+HEL++ R N ++T C +
Sbjct: 92 QRRKEDAFKTALCDAYKRSQACSYGDQCRFAHGVHELRLPMNPRGRNHPKYKTVLCDKFS 151
Query: 257 KYGYCRYGKRCCFKH 271
G C+YG RC F H
Sbjct: 152 MTGNCKYGTRCQFIH 166
>CE14978 [R] KOG1677 CCCH-type Zn-finger protein
Length = 199
Score = 62.8 bits (151), Expect = 6e-10
Identities = 28/74 (37%), Positives = 45/74 (59%), Gaps = 5/74 (6%)
Query: 203 RVNKQLYKTELCESFATKGTCKYGNKCQFAHGLHELKIKERS---NN--FRTKPCVNWQK 257
R + +KT LC++F C YG +C+FAH + EL++K ++ NN ++T C N+
Sbjct: 63 RRRENAFKTALCKTFQLTKACSYGEQCKFAHSVEELQLKHQNLGINNPKYKTVLCDNFST 122
Query: 258 YGYCRYGKRCCFKH 271
G+C+YG +C F H
Sbjct: 123 TGHCKYGTKCQFIH 136
>At1g66810 [R] KOG1677 CCCH-type Zn-finger protein
Length = 310
Score = 62.4 bits (150), Expect = 8e-10
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 208 LYKTELCESFATKGTCKYGNKCQFAHGLHELKIKERSNNFRTKPCVNWQKYGYCRYGKRC 267
+ KTELC + G C YG+ CQFAHG+ EL+ R ++T+ C C YG RC
Sbjct: 232 MMKTELCNKWQETGACCYGDNCQFAHGIDELRPVIRHPRYKTEVCRMMVTGAMCPYGHRC 291
Query: 268 CFKHG--DDEDIQVYM 281
F+H D E + + M
Sbjct: 292 HFRHSLTDQERMMMMM 307
>CE03005 [R] KOG1677 CCCH-type Zn-finger protein
Length = 407
Score = 61.2 bits (147), Expect = 2e-09
Identities = 28/69 (40%), Positives = 41/69 (58%), Gaps = 4/69 (5%)
Query: 209 YKTELCESFATKGTCKYGNKCQFAHGLHELK---IKERSNN-FRTKPCVNWQKYGYCRYG 264
YKT +C+++ TC + + C+FAHG EL+ ++ NN ++TK C + G C YG
Sbjct: 113 YKTVICQAWLESKTCSFADNCRFAHGEEELRPTFVEPLQNNKYKTKLCDKYTTTGLCPYG 172
Query: 265 KRCCFKHGD 273
KRC F H D
Sbjct: 173 KRCLFIHPD 181
>CE23328 [R] KOG1677 CCCH-type Zn-finger protein
Length = 196
Score = 60.5 bits (145), Expect = 3e-09
Identities = 29/70 (41%), Positives = 42/70 (59%), Gaps = 5/70 (7%)
Query: 206 KQLYKTELCESFATKGT-CKYGNKCQFAHGLHELKI---KERSNNFRTKPCVNWQKYGYC 261
++ +KT LC F +G C YG +C+FAH +HEL+ K+ N++T C + GYC
Sbjct: 81 EEAFKTALC-GFQRRGQKCIYGEQCKFAHSVHELRFTQAKKTHRNYKTVLCDKFSTTGYC 139
Query: 262 RYGKRCCFKH 271
+YG RC F H
Sbjct: 140 KYGARCQFIH 149
>CE22669 [R] KOG1677 CCCH-type Zn-finger protein
Length = 203
Score = 57.8 bits (138), Expect = 2e-08
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 206 KQLYKTELCESFATKGTCKYGNKCQFAHGLHELKI---KERSNNFRTKPCVNWQKYGYCR 262
++ +KT L C YG KC+FAH +HEL+ K N++T C + G+C+
Sbjct: 86 EEAFKTSLYGFHRRGQKCAYGEKCKFAHSVHELRFPQTKRNHRNYKTVLCNKFSTTGHCK 145
Query: 263 YGKRCCFKHGDDEDIQVYMKVNMIKKIEDEPIRKNLHADV 302
YG RC F H + N + E+ I N+ DV
Sbjct: 146 YGIRCQFIHRSMDS----TSSNQSNETENVTIDLNVQTDV 181
>CE21237 [R] KOG1677 CCCH-type Zn-finger protein
Length = 468
Score = 57.4 bits (137), Expect = 3e-08
Identities = 31/78 (39%), Positives = 44/78 (55%), Gaps = 8/78 (10%)
Query: 209 YKTELCESFATK-GTCKYGNKCQFAHGLHELKIKER-----SNNFRTKPCVNWQK--YGY 260
YKT LC A+ C G +C+FAHGL EL+ + +N ++TK C N+ + G+
Sbjct: 271 YKTRLCMMHASGIKPCDMGARCKFAHGLKELRATDAPARYPNNKYKTKLCKNFARGGTGF 330
Query: 261 CRYGKRCCFKHGDDEDIQ 278
C YG RC F H D++ Q
Sbjct: 331 CPYGLRCEFVHPTDKEFQ 348
>CE26846 [R] KOG1677 CCCH-type Zn-finger protein
Length = 467
Score = 55.1 bits (131), Expect = 1e-07
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 209 YKTELCESFATK-GTCKYGNKCQFAHGLHELKIKE-----RSNNFRTKPCVNWQK--YGY 260
+KT LC + A C G +C+FAHGL EL+ + +N ++TK C N+ + G
Sbjct: 274 FKTRLCMTHAAGINPCALGARCKFAHGLKELRASDIPTRYPNNKYKTKLCKNFARGGSGV 333
Query: 261 CRYGKRCCFKHGDDEDIQ 278
C YG RC F H D + Q
Sbjct: 334 CPYGLRCEFVHPSDTEFQ 351
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.133 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,942,525
Number of Sequences: 60738
Number of extensions: 672380
Number of successful extensions: 1775
Number of sequences better than 1.0e-05: 27
Number of HSP's better than 0.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1691
Number of HSP's gapped (non-prelim): 59
length of query: 310
length of database: 30,389,216
effective HSP length: 106
effective length of query: 204
effective length of database: 23,950,988
effective search space: 4886001552
effective search space used: 4886001552
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)