ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIV4168   suspect: LH   F     KOG2056  Nucleotide transport and metabolism                            Equilibrative nucleoside transporter protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIV4168 1414706 1413510 -399 
         (399 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YDR153c [F] KOG2056 Equilibrative nucleoside transporter protein      290   3e-78

>YDR153c [F] KOG2056 Equilibrative nucleoside transporter protein
          Length = 411

 Score =  290 bits (741), Expect = 3e-78
 Identities = 158/305 (51%), Positives = 195/305 (63%), Gaps = 27/305 (8%)

Query: 1   MDSISKKLGNLGLHDFRNAARFAQNVIVQYEPYQIDIRRATNTDSWGPTPKHLAKVMRHR 60
           MDS+SKK+ NLG+HD RNAARFAQNVIVQYEPYQIDIRRATNTD+WGPTPKHLAKV+R+R
Sbjct: 1   MDSLSKKIQNLGIHDIRNAARFAQNVIVQYEPYQIDIRRATNTDAWGPTPKHLAKVLRNR 60

Query: 61  YEVSMFLMTEYTLKRLVDHMAKRPKNMYEKARKQYVNYGNEWRXXXXXXXXXXXXXMRSD 120
           Y+V ++LMTEYTLKRLVDH+A RPKN+YEKARK YVNYG+EWR             +  D
Sbjct: 61  YQVPLYLMTEYTLKRLVDHIATRPKNLYEKARKDYVNYGSEWRVVLKCLVVIEFLLLNVD 120

Query: 121 RGKETDQVLSCLQAHKHILTKETMQYRVDFSSDGKMELHERGIKKKCEHIIQLIEDTSYL 180
            G E +Q+ SCL  HKHILT+E  Q++V FS+DGKME+HERGI+KK E I+Q +ED+ +L
Sbjct: 121 TGDELNQIRSCLLTHKHILTREIAQFKVKFSNDGKMEIHERGIRKKGELILQYLEDSQFL 180

Query: 181 KRERSKTAENTQKIVAGSAGSRSESLYNDISINADSFAGSSSTID------DSDDFEYE- 233
           K+ER+K  +N  KI          S+YN    N  S + S   ID      D+D F+ E 
Sbjct: 181 KKERAKNKKNALKI----RQQGESSIYN---ANQISTSASYDNIDDDEFDADADGFDSEM 233

Query: 234 ------------PTPTAHRDRRSSAVDXXXXXXXXXXXXXIRNSEHQRKVSAQEPEI-DL 280
                        T      RR S ++             I+N E QRK   Q+  I DL
Sbjct: 234 DANNVTNFNVPVETEANSNTRRRSHMEEQRRQRREILREQIKNKEQQRKRKQQQDSIPDL 293

Query: 281 LDFDD 285
           +D DD
Sbjct: 294 IDLDD 298


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.315    0.131    0.371 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,456,205
Number of Sequences: 60738
Number of extensions: 599978
Number of successful extensions: 1807
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1806
Number of HSP's gapped (non-prelim): 1
length of query: 399
length of database: 30,389,216
effective HSP length: 109
effective length of query: 290
effective length of database: 23,768,774
effective search space: 6892944460
effective search space used: 6892944460
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)