ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV4190 good UD KOG1860 Cell cycle control, cell division, chromosome partitioning Nuclear protein export factor
r_klactIV4190 good UD KOG1860 Intracellular trafficking, secretion, and vesicular transport Nuclear protein export factor
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV4190 1419548 1423456 1303
(1303 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDR159w [UD] KOG1860 Nuclear protein export factor 793 0.0
SPCC576.05 [UD] KOG1860 Nuclear protein export factor 269 2e-71
SPCC70.06 [UD] KOG1860 Nuclear protein export factor 166 3e-40
Hs19923191 [UD] KOG1860 Nuclear protein export factor 130 1e-29
7293322 [UD] KOG1860 Nuclear protein export factor 114 1e-24
At3g06290 [UD] KOG1860 Nuclear protein export factor 92 7e-18
CE04432 [UD] KOG1860 Nuclear protein export factor 81 9e-15
7294935 [UD] KOG1860 Nuclear protein export factor 58 1e-07
Hs9558739 [UD] KOG1860 Nuclear protein export factor 57 1e-07
>YDR159w [UD] KOG1860 Nuclear protein export factor
Length = 1301
Score = 793 bits (2047), Expect = 0.0
Identities = 468/1186 (39%), Positives = 692/1186 (57%), Gaps = 90/1186 (7%)
Query: 70 EIIGTLFDGNPAILGFQQPTKPAERELPRYLIRQAPILKPVPIVQDEWDKKNQERMLQLE 129
+++G L +P LGFQ+ + A RELPR+LI Q P L+ VQD WDK NQE+M+ LE
Sbjct: 94 QLVGPLIS-SPDNLGFQKRSHKA-RELPRFLINQEPQLEKRAFVQDPWDKANQEKMISLE 151
Query: 130 DNISDVTTLWETLKKMRDEEREVMEEKGLVDKADQAKDLTEAIIFQGTCQDMCPIFERAR 189
++I D+ L+ETLKKMR+ ER +MEEKGLVDKAD AKDL +AI+FQGTC DMCP FER+R
Sbjct: 152 ESIDDLNELYETLKKMRNTERSIMEEKGLVDKADSAKDLYDAIVFQGTCLDMCPTFERSR 211
Query: 190 RSVENNVVRYEKANPSDKKVDRGKALKVFXXXXXXXXXXXXSDVRPPHVLLGTLDYIVDE 249
R+VE V YEK P+DKK R KALKVF SDVRPPH+L+ TLDYIVD
Sbjct: 212 RNVEYTVYSYEKNQPNDKKASRTKALKVFARPAAAAAPPLPSDVRPPHILVKTLDYIVDN 271
Query: 250 IVPLLPDCEAFLWDRMRSIRQDFTYQNYSGPEAIDCNERIVRIHLLILHQMAKTDITFSV 309
++ LP+ E FLWDRMRSIRQDFTYQNYSGPEA+DCNERIVRIHLLILH M K+++ FS+
Sbjct: 272 LLTTLPESEGFLWDRMRSIRQDFTYQNYSGPEAVDCNERIVRIHLLILHIMVKSNVEFSL 331
Query: 310 QQELEQLHKAIITLCEIYDEVRDQGGQCPNEAEFRAYALLSKIRDPEYDKMAQDLPNDIF 369
QQELEQLHK++ITL EIYD+VR GG CPNEAEFRAYALLSKIRDP+YD+ Q LP IF
Sbjct: 332 QQELEQLHKSLITLSEIYDDVRSSGGTCPNEAEFRAYALLSKIRDPQYDENIQRLPKHIF 391
Query: 370 NDELMQLAITFRRILANSNHVERGVVVTENCMNLYDRFFQLIQSDKVPFLMSSFLQVYLN 429
D+L+Q+A+ FRR+++NS + ERG V TENC+N Y RFFQL+QS +P LM FLQ++L
Sbjct: 392 QDKLVQMALCFRRVISNSAYTERGFVKTENCLNFYARFFQLMQSPSLPLLMGFFLQMHLT 451
Query: 430 EIRFYAFKSLSLAVTRKGGNLPYQYFIEHFLFRDANDLETFCRYYSIDFGDGKIL-LKSL 488
+IRFYA ++LS + +K +P+ Y LF + ++ FC YYSI+ +G LK+L
Sbjct: 452 DIRFYALRALSHTLNKKHKPIPFIYLENMLLFNNRQEIIEFCNYYSIEIINGDAADLKTL 511
Query: 489 TGTSHFLAETQPMRKNWVSCVEQKLQRNTTTALINNRKHNV-----------DTIPSNKR 537
SH L+ETQP++K +++C+E++LQ+ T LIN + N+ D IPS
Sbjct: 512 QHYSHKLSETQPLKKTYLTCLERRLQKTTYKGLINGGEDNLASSVYVKDPKKDRIPS--- 568
Query: 538 SLLDNVSQLEESQLTQYNQNFAGTSGAKETLPISANR--------PFSFQTSTSLITEKN 589
+ + S L E+ YN+ S K + S R PFS ++ ++
Sbjct: 569 --IADQSFLMENFQNNYNEKLNQNSSVKPQINTSPKRVATRPNHFPFSQESKQLPQISQS 626
Query: 590 ATANGN---QPFMFGTPSQPKTDVKKAPNDVSLEGV--KLGQAAPFGKTDEFVXXXXXXX 644
T + N P + G S+ K K D V + Q + + +
Sbjct: 627 HTLSTNPLLTPQVHGDLSEQKQQQIKTVTDGGSPFVFDQSAQNSTVEASKAHMISTTSNG 686
Query: 645 XXXXXXXXFNMQKQLDEKARLLNEKQGLEKQNXXXXXXXXXXXXVQQAAIQRRNEIVNET 704
+ + E+ R+ EK L+K+ +Q A E+VN +
Sbjct: 687 AYDEKLSSEQEEMRKKEEQRIEEEKTQLKKKQ----ENADKQVITEQIANDLVKEVVNSS 742
Query: 705 SSNIFTTLMEQQLEKTIKNEIQKRQANALHIENLSRDLFRSFIHEQIYFVFLEVRADIFK 764
+I +K E + I+ ++R+L+ +F+HE++Y ++++ RA++ +
Sbjct: 743 VISI------------VKREFSEANYRKDFIDTMTRELYDAFLHERLYLIYMDSRAELKR 790
Query: 765 KKIITMHVMKKWRSKFNXXXXXXXXXXXXXEEALRLSKELGVG--KRVHSLRSTTKKNKY 822
+ +KW++ ++ EE +S +LGV K+ L T K
Sbjct: 791 NSTLKKKFFEKWQASYSQAKKNRILEEKKREEIKLVSHQLGVPGFKKSTCLFRTPYKG-- 848
Query: 823 LDANSTFEASSFIKSGTMNYSTPLHLEENHFTTPVRNNSNVWSPLDLKEVYFNELLSRLQ 882
+ NS+F SS K+ +P++ E N F T + S +W PL+++ +Y++ L
Sbjct: 849 -NVNSSFMLSSSDKNLIF---SPVNDEFNKFATHLTKISKLWRPLEMQSIYYDNL----- 899
Query: 883 GILKDSKLQSKDIKSQIDIVLYSKTWECISGQWLLSKFHL--AKDSTYTIDSPILNAGFI 940
K S + + ++ +Y+K W +S +W+LSKF+L A+DS + I+++ I
Sbjct: 900 ----TKKFPSNSL-TPANLFIYAKDWTSLSNRWILSKFNLQTAQDSK-KFSNNIISSRII 953
Query: 941 RLTNDYKTDSFNNVNLVLFNSGVTDSDIFDLDMKLQKDGERLIEVICGVAFNTNYKFKLI 1000
+ ++Y+ F+++ L++FN+GVT+ DIFDL+MKL+ DGE LI++I G++ NTN F L+
Sbjct: 954 CIDDEYEPSDFSDLQLLIFNTGVTNPDIFDLEMKLKDDGEELIKLITGISLNTNICFSLL 1013
Query: 1001 IIYWESIENPKSTTEIKQLLKVHKILKRFGDIMYGIEVVKIVGSNPEALVANGLANAAHD 1060
IIYWES EN S + IK LLK+++I K + ++ I+++ + +P + + L+ +H
Sbjct: 1014 IIYWESAENTLSESTIKHLLKLNRISKNYSSVIERIDLMNLTEESPHKCLEDKLSEISHS 1073
Query: 1061 FQFELTDRGLYNET-RKRRSLLGV-GMDTVREPSADIDEKMQLMLQQXXXXXXXXXXXXX 1118
+ ++LT+RG Y++T R++RSL G+ T + + DID+KM+ ML++
Sbjct: 1074 YVYKLTERGKYDKTLRQKRSLAGIHSRSTQLQTTKDIDQKMKKMLEKEKNKYQQQIGERN 1133
Query: 1119 AYAYLKNHAMASPRARYKKLPVLLSESHKPKYKTPIPLANSRHSSITSADVSNPSHLVKK 1178
YA+L++H ASPR++ +KLP+LLS SH ++KT PLA+ ++S +S PSHL K
Sbjct: 1134 TYAHLESHIDASPRSKKRKLPILLSTSHSSQFKT--PLASRLNTSGSSTSPPLPSHLAMK 1191
Query: 1179 IK----------------PSRT-QIPPHNTSGNFGTPSQPRSLLNH 1207
+ PS + IP + SGN T Q + L+ +
Sbjct: 1192 FRKNSRVTSLHTVLPVSTPSHSNNIPAASFSGNNTTDIQSQQLIEN 1237
>SPCC576.05 [UD] KOG1860 Nuclear protein export factor
Length = 1024
Score = 269 bits (687), Expect = 2e-71
Identities = 158/406 (38%), Positives = 232/406 (56%), Gaps = 12/406 (2%)
Query: 139 WETLKKMRDEEREVMEEKGLVDKADQAKDLTEAIIFQGTCQDMCPIFERARRSVENNVVR 198
+E L+ +R++EREV + GL+D + + L EA+ F GTC DMCP +ER +R +NN+ R
Sbjct: 69 FEELRSLREKEREVAIQNGLIDDPTKPRQLDEAVTFVGTCPDMCPEYEREQREYQNNLER 128
Query: 199 YEKANPSDKKVDRGKALKVFXXXXXXXXXXXXSDVRPPHVLLGTLDYIVDEIV---PLLP 255
+E NP +VD+ A+K F SDVRPP VL +LDY+VD+IV L
Sbjct: 129 WE-INPETGRVDKNLAVKAFHRPAAGNEQALPSDVRPPPVLKKSLDYLVDKIVCGPDPLE 187
Query: 256 DCEAFLWDRMRSIRQDFTYQNYSGPEAIDCNERIVRIHLLILHQMAKTDITFSVQQELEQ 315
+ F+ DR RSIRQDFT QN +A+ C+ERI R H+L +HQ+ + FS QQE+EQ
Sbjct: 188 NTHFFVRDRTRSIRQDFTLQNCRDLDAVACHERIARYHILCIHQLCEKK-QFSAQQEVEQ 246
Query: 316 LHKAII-TLCEIYDEVRDQGGQCPNEAEFRAYALLSKIRDPEYDKMAQDLPNDIFNDELM 374
L K I+ +LCE YD++R +CPNE EFR+YA+++ +RDP+ + +Q LP +IF+D+ +
Sbjct: 247 LRKGILQSLCEFYDDLRKVKIRCPNEPEFRSYAIITHLRDPDVVRQSQILPIEIFDDQRV 306
Query: 375 QLAITFRRILANSNHVERGVVV---TENCMNLYDRFFQLIQSDKVPFLMSSFLQVYLNEI 431
QLA+ LA N+ G ++ TE C NLY RFF+L+QS V +LM+ L+ + I
Sbjct: 307 QLALRL-SALAQKNNERVGHILPRNTEACPNLYTRFFKLVQSPAVTYLMACLLESHFMSI 365
Query: 432 RFYAFKSLSLAVTRKGGNLPYQYFIEHFLFRDANDLETFCRYYSIDFGDGKILLKSLTGT 491
R A K++ A N P F +F RYY ++ D L
Sbjct: 366 RKGALKAMRKAFMSAHANFPCGDLKRILHFDTVEQAASFSRYYGLEVSDDNGELSINLNK 425
Query: 492 SHFLAETQPMRKNWVS--CVEQKLQRNTTTALINNRKHNVDTIPSN 535
+ F +++P + S VE KLQ + +IN ++N+D + N
Sbjct: 426 TAFFNDSKPDFRQLFSQTLVESKLQNRSFADIINGSRYNIDRVSPN 471
>SPCC70.06 [UD] KOG1860 Nuclear protein export factor
Length = 458
Score = 166 bits (419), Expect = 3e-40
Identities = 104/353 (29%), Positives = 181/353 (50%), Gaps = 24/353 (6%)
Query: 139 WETLKKMRDEEREVMEEKGLVDKADQAKDLTEAIIFQGTCQDMCPIFERARRSVENNVVR 198
++ LKK R +E+E + K Q+ + ++ + GTC+ MCP FE R +++ +
Sbjct: 42 FQALKKKRKDEQESFQAK-------QSTNWEKSSVLVGTCRQMCPEFELEERKLQHAIHP 94
Query: 199 YEKANPSDKKVDRGKALKVFXXXXXXXXXXXXSDVRPPHVLLGTLDYIVDEIVPL--LPD 256
YE +P K+ A+K + SDVRPP +L T+DY+ I+ L +
Sbjct: 95 YE-LDPVSKQAHPSLAVKAYHRPAAGKGPILPSDVRPPSILKNTIDYLFKVILDRYSLRE 153
Query: 257 CEAFLWDRMRSIRQDFTYQNYSGPEAIDCNERIVRIHLLILHQMAKTDITFSVQQELEQL 316
AF+ DR R++RQDF+ Q+ +++ C+E I R H++ LH++A T FS QQE+EQL
Sbjct: 154 AHAFVRDRTRAVRQDFSVQSSFSQDSVYCHELIARFHIISLHELAHTP-NFSRQQEIEQL 212
Query: 317 HKA---IITLCEIYDEVRDQGGQCPNEAEFRAYALLSKIRDPEYDKMAQDLPNDIFNDEL 373
K+ + TL ++YD + + C +EAEFRAY +L + DP P+ +F +
Sbjct: 213 SKSMEILYTLGQLYDYMHLRKEHCTHEAEFRAYMVLLSLGDPSVGLDTLSWPDFVFKKPI 272
Query: 374 MQLAITFRRILANSNH-------VERGVVV---TENCMNLYDRFFQLIQSDKVPFLMSSF 423
++ ++ + +NH + +V TE NLY RFF++ S +V +LM
Sbjct: 273 VKTSLKLYSLAQRNNHTITTSNSISLSLVSSFNTEATSNLYTRFFKIASSFRVSYLMGCL 332
Query: 424 LQVYLNEIRFYAFKSLSLAVTRKGGNLPYQYFIEHFLFRDANDLETFCRYYSI 476
L +++ IR A K++ N+P++ ++ ++L C+ + +
Sbjct: 333 LDLFVPSIRTGALKAMKKCYLSAHSNIPFKDLMKILAATSEDELVQCCKMHGL 385
>Hs19923191 [UD] KOG1860 Nuclear protein export factor
Length = 1980
Score = 130 bits (328), Expect = 1e-29
Identities = 102/395 (25%), Positives = 182/395 (45%), Gaps = 29/395 (7%)
Query: 101 IRQAPILKPVPIVQDEWDKKNQERMLQLEDNISDVTTLWETLKKMRDEEREVMEEKGLVD 160
+++ +LK D +D + E L + ++TL T+ + E+ +++++ +
Sbjct: 559 VKKPSLLKAHQFEGDSFDSAS-EGSEGLGPCVLSLSTLIGTVAETSKEKYRLLDQRDRIM 617
Query: 161 KADQAK--DLTEAIIFQGTCQDMCPIFERARRSVENNVVRYEKANPSDKKVDRGKALKVF 218
+ + K DL +A F GTC DMCP ER R + + +E P +VD A+K +
Sbjct: 618 RQARVKRTDLDKARTFVGTCLDMCPEKERYMRETRSQLSVFEVV-PGTDQVDHAAAVKEY 676
Query: 219 XXXXXXXXXXXXSDVRPPHVLLGTLDYIVDEIVPL----LPDCEAFLWDRMRSIRQDFTY 274
++RP VL T+DY+V +I+ L D F+W+R R IR+D T
Sbjct: 677 SRSSADQEEPLPHELRPLPVLSRTMDYLVTQIMDQKEGSLRDWYDFVWNRTRGIRKDITQ 736
Query: 275 QNYSGPEAIDCNERIVRIHLLILHQMAKTDI-TFSVQQELEQLHKAIITLCEIYDEVRDQ 333
Q+ P + E+ R H+ H M + + +F + E + K + +L E+Y ++R++
Sbjct: 737 QHLCDPLTVSLIEKCTRFHIHCAHFMCEEPMSSFDAKINNENMTKCLQSLKEMYQDLRNK 796
Query: 334 GGQCPNEAEFRAYALLSKIRDPEYDKMAQDLPNDIFNDELMQLAITFRRILANSNHVERG 393
G C +EAEF+ Y +L + + + Q + N ++ A+ L ++N V
Sbjct: 797 GVFCASEAEFQGYNVLLSLNKGDILREVQQFHPAVRNSSEVKFAVQAFAALNSNNFV--- 853
Query: 394 VVVTENCMNLYDRFFQLIQSDKVPFLMSSFLQVYLNEIRFYAFKSLSLAV---TRKGGNL 450
RFF+L+QS +L + L Y ++IR A ++L+ A T++
Sbjct: 854 ------------RFFKLVQS--ASYLNACLLHCYFSQIRKDALRALNFAYTVSTQRSTIF 899
Query: 451 PYQYFIEHFLFRDANDLETFCRYYSIDFGDGKILL 485
P + LFRD + F + + DG + L
Sbjct: 900 PLDGVVRMLLFRDCEEATDFLTCHGLTVSDGCVEL 934
>7293322 [UD] KOG1860 Nuclear protein export factor
Length = 2122
Score = 114 bits (284), Expect = 1e-24
Identities = 89/329 (27%), Positives = 141/329 (42%), Gaps = 30/329 (9%)
Query: 175 QGTCQDMCPIFERARRSVENNVVRYEKANPSDKKVDRGKALKVFXXXXXXXXXXXXSDVR 234
QG C DMCP ER R + V YE SD+ + +ALK + ++R
Sbjct: 199 QGHCADMCPEKERVLREFQRQVAYYELQPGSDELICHERALKQYSRSSADQETPLPHELR 258
Query: 235 PPHVLLGTLDYIVDEIVPL---------LPDCEAFLWDRMRSIRQDFTYQNYSGPEAIDC 285
L T+ Y++ EI+ + + D F+WDR RSIR++ T Q A+
Sbjct: 259 NETALHMTMSYLMHEIMDISERQDPQSHMGDWFHFVWDRTRSIRKEITQQELCSLGAVKL 318
Query: 286 NERIVRIHLLILHQMAKTDIT-FSVQQELEQLHKAIITLCEIYDEVRDQGGQCPNEAEFR 344
E+ R H+ ++ D + F + E L K + TL +Y ++R +G CP EAEFR
Sbjct: 319 VEQCARFHIHCAARLVDADPSVFDSKINAENLTKCLQTLKYMYHDLRIKGVPCPKEAEFR 378
Query: 345 AYALLSKIRDPEYDKMAQDLPNDIFNDELMQLAITFRRILANSNHVERGVVVTENCMNLY 404
Y +L + D + LP ++ + ++ AI F L ++N V
Sbjct: 379 GYIVLLNLADANFLWDIGQLPAELQSCPEVRQAIQFYLALQDTNFV-------------- 424
Query: 405 DRFFQLIQSDKVPFLMSSFLQVYLNEIRFYAFKSLSLAV--TRKG--GNLPYQYFIEHFL 460
RFFQL+ +L + L Y +R L A RK +LP Y E
Sbjct: 425 -RFFQLLADKDTSYLSACILVNYFTRLRVLGLHRLIQAYRSPRKDEVSSLPLSYIAELLS 483
Query: 461 FRDANDLETFCRYYSIDFGD-GKILLKSL 488
F + F ++Y + + G+++L +
Sbjct: 484 FASEQEAADFVQHYGLQINEAGRVVLSRM 512
>At3g06290 [UD] KOG1860 Nuclear protein export factor
Length = 1713
Score = 91.7 bits (226), Expect = 7e-18
Identities = 67/268 (25%), Positives = 123/268 (45%), Gaps = 32/268 (11%)
Query: 176 GTCQDMCPIFERARRSVENNVVRYEKANPSDKKVDRGKALKVFXXXXXXXXXXXXSDVRP 235
G C DMCP ER R + ++ YE+ + + + A+K +RP
Sbjct: 483 GVCPDMCPESERGERERKGDLDHYERVDGDRNQTSKSLAVKKVSSPTAEREAIL---IRP 539
Query: 236 PHVLLGTLDYIVDEIVPLLPD----CEAFLWDRMRSIRQDFTYQNYSGPEAIDCNERIVR 291
+L T++Y++ + + FLWDRMR+IR D Q+ EAI E+++R
Sbjct: 540 MPILQNTMEYLLSLLDRPYNENFLGMYNFLWDRMRAIRMDLRMQHIFNQEAITLLEQMIR 599
Query: 292 IHLLILHQMAK------TDITFSVQQELEQLHKAIITLCEIYDEVRDQGGQCPNEAEFRA 345
+H++ +H++ + F +EQ++K + L ++YD+ R +G P E EFR
Sbjct: 600 LHIIAMHELCEYTKGEGFSEGFDAHLNIEQMNKTSVELFQMYDDHRKKGITVPTEKEFRG 659
Query: 346 YALLSKIRDPEYDKMAQDLPNDIFNDELMQLA-ITFRRILANSNHVERGVVVTENCMNLY 404
Y L K+ + +++ DL N E+ Q + + F R +A + +
Sbjct: 660 YYALLKL---DKHQLSLDLAN--MTPEIRQTSEVLFARNVARACRTGNFIA--------- 705
Query: 405 DRFFQLIQSDKVPFLMSSFLQVYLNEIR 432
FF+L + K +L + + + +++R
Sbjct: 706 --FFRLAR--KASYLQACLMHAHFSKVR 729
>CE04432 [UD] KOG1860 Nuclear protein export factor
Length = 1116
Score = 81.3 bits (199), Expect = 9e-15
Identities = 77/343 (22%), Positives = 145/343 (41%), Gaps = 38/343 (11%)
Query: 178 CQDMCPIFERARRSVENNVVRYEKANPSDKKVDRGKALKVFXXXXXXXXXXXXSDVRPPH 237
C++MC ER +R V+ V YE + V +K + ++R
Sbjct: 291 CEEMCTEKERYQRIVQKGVSPYE-CDIVSGDVSHEMMVKQYARSAADQERPLPHELRSEK 349
Query: 238 VLLGTLDYIVDEIVPLLPDCEA-------FLWDRMRSIRQDFTYQNYSGPEAIDCNERIV 290
++ T Y++ ++ PD FLW+R R++R++ T + S A++ ER
Sbjct: 350 IMNQTTCYLLHNVLDDFPDSADQRGAWYNFLWNRTRALRKEVTQLSLSDTLALNLVERCT 409
Query: 291 RIHLLILHQMAKTDIT-FSVQQELEQLHKAIITLCEIYDEVRDQGGQCPNEAEFRAYALL 349
R+H+L + + + F E L K + TL +Y++ +G C NE EFR+Y ++
Sbjct: 410 RLHILFGYVLCDLGVEQFDPAMNNETLGKCLQTLRHLYEDFEKRGISCENEPEFRSYDVM 469
Query: 350 SKIRDPEYDKMAQDLPNDIFNDELMQLAITFRRILANSNHVERGVVVTENCMNLYDRFFQ 409
+ D +++ + ++LA+ ++N Y RFF+
Sbjct: 470 LHMNDTNVLAQVLAYRSEVRQSQPVRLALQLATAFRDNN---------------YFRFFR 514
Query: 410 LIQSDKVPFLMSSFLQVYLNEIRFYAFKSLS---LAVTRKGGNLPYQY-FIEHFL-FRDA 464
L+Q+ +S+LQ + F +S + ++++ GN+PY ++ L F +
Sbjct: 515 LLQT------QASYLQCCVAHKLFAVTRSNAIRIMSISYGIGNIPYPLDKLQRILGFDNT 568
Query: 465 NDLETFCRYYSIDF-GDGKILLKSLTGTSHFLAETQPMRKNWV 506
DL Y ++ G IL K T + + +P W+
Sbjct: 569 EDLTVMLNIYELEIEGSDVILAKDARYTLNNVVPLKP--NQWI 609
>7294935 [UD] KOG1860 Nuclear protein export factor
Length = 343
Score = 57.8 bits (138), Expect = 1e-07
Identities = 79/363 (21%), Positives = 143/363 (38%), Gaps = 33/363 (9%)
Query: 175 QGTCQDMCPIFERARRSVENNVVRYEKANPSDKKVDRGKALKVFXXXXXXXXXXXXSDVR 234
+G+C+ CP E R E + +E N K G +K F ++R
Sbjct: 5 RGSCESFCPDGEAKMRIREKLLHYFELKNGQKNKP--GVLVKEFTRSAADVKMPMPKEMR 62
Query: 235 PPHVLLGTLDYIVDEIVPLLPDCEAFLWDRMRSIRQDFTYQNYSGPEAIDCNERIVRIHL 294
L T++Y++ E + F++DR+R++R++ Q Y + I E IV
Sbjct: 63 TEAALTKTVEYLLKEQPYNV--AYDFIFDRLRAVRREIVIQMYDASQKICLLEPIVMFLA 120
Query: 295 LILHQMAKTDIT-FSVQQELEQLHKAIITLCEIYDEVRD-QGGQCPN--EAEFRAYA--- 347
+++ + I F ++ + L + + + Y+E+ D + + P E E R +
Sbjct: 121 YSRYRLCEEPIEKFDLKICNQHLQECLTGVLCCYEELEDLESSREPTVRELERRCFIESL 180
Query: 348 -LLSKIRDPEYDKMAQDLPNDIFNDELMQLAITFRRILANSNHVERGVVVTENCMNLYDR 406
L + PE A LP+ + D +L G+ + NLY
Sbjct: 181 YQLFNLGSPESFTRALTLPDYVRRDATFKLCF--------------GICLAFQQGNLYR- 225
Query: 407 FFQLIQSDKVPFLMSSFLQVYLNEIRFYAFKSLSLAVTRKGGNLPYQYFIEHFLFRDAND 466
L+ ++P ++ + L IR + + A K +P Y + LF
Sbjct: 226 --VLMGVPQLPHILCAVAAAKLQVIRRSLLQIFTHAYNNKQLTVPVPYLLRLLLFDGPTG 283
Query: 467 LETFCRYYSIDF-GDGKILLKSLTGTSHFLAETQPMRKNWVSCVEQKLQRNTTTALINNR 525
L+ CR+Y+I D K + + T +H P + + VE KL+R ++ +
Sbjct: 284 LQDQCRHYNISLTADRKAVQFNKTDFNHNAEVFTPQHERF---VESKLKRIYIPEVLLLK 340
Query: 526 KHN 528
K N
Sbjct: 341 KFN 343
>Hs9558739 [UD] KOG1860 Nuclear protein export factor
Length = 285
Score = 57.4 bits (137), Expect = 1e-07
Identities = 36/114 (31%), Positives = 53/114 (45%), Gaps = 7/114 (6%)
Query: 176 GTCQDMCPIFERARRSVENNVVRYE---KANPSDKKVDRGKALKVFXXXXXXXXXXXXSD 232
GTC DMCP ERA+R E+ + R E + D +A+K + S
Sbjct: 55 GTCPDMCPAAERAQREREHRLHRLEVVPGCRQDPPRADPQRAVKEYSRPAAGKPRPPPSQ 114
Query: 233 VRPPHVLLGTLDYIVDEIVP----LLPDCEAFLWDRMRSIRQDFTYQNYSGPEA 282
+RPP VLL T+ Y+ E+ + +F+ DR+R++R D Q EA
Sbjct: 115 LRPPSVLLATVRYLAGEVAESADIARAEVASFVADRLRAVRLDLALQGAGDAEA 168
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.134 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,058,605
Number of Sequences: 60738
Number of extensions: 2949085
Number of successful extensions: 8718
Number of sequences better than 1.0e-05: 9
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 8681
Number of HSP's gapped (non-prelim): 14
length of query: 1303
length of database: 30,389,216
effective HSP length: 118
effective length of query: 1185
effective length of database: 23,222,132
effective search space: 27518226420
effective search space used: 27518226420
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)