ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIV4202.1   suspect: Pn  O     KOG0714   Posttranslational modification, protein turnover, chaperones   Molecular chaperone (DnaJ superfamily)

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIV4202.1 1424032 1423877 -52  
         (52 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC11B10.05c [O] KOG0714 Molecular chaperone (DnaJ superfamily)       27   6.9  
HsM8922283 [A] KOG2138 Predicted RNA binding protein contains G-...    27   6.9  
Hs6806921 [P] KOG1966 Sodium/hydrogen exchanger protein                27   6.9  
Hs21361684 [A] KOG2138 Predicted RNA binding protein contains G-...    27   6.9  

>SPBC11B10.05c [O] KOG0714 Molecular chaperone (DnaJ superfamily)
          Length = 494

 Score = 26.6 bits (57), Expect = 6.9
 Identities = 17/38 (44%), Positives = 20/38 (51%), Gaps = 7/38 (18%)

Query: 21  NSTATLDSPRYNRSLKN---KDTNEN----TQENTPTH 51
           NS+ T  SPR + S  N   KDT+E     T  NTP H
Sbjct: 242 NSSITKSSPRSSSSSNNERFKDTSEESIIFTSPNTPEH 279


>HsM8922283 [A] KOG2138 Predicted RNA binding protein contains G-patch domain
          Length = 483

 Score = 26.6 bits (57), Expect = 6.9
 Identities = 11/32 (34%), Positives = 19/32 (59%)

Query: 16  PTIKPNSTATLDSPRYNRSLKNKDTNENTQEN 47
           P   PN+  TL+ P+  +  KNKD ++  +E+
Sbjct: 388 PVFCPNARQTLEVPQKEKHKKNKDKHKAKKEH 419


>Hs6806921 [P] KOG1966 Sodium/hydrogen exchanger protein
          Length = 834

 Score = 26.6 bits (57), Expect = 6.9
 Identities = 16/58 (27%), Positives = 24/58 (40%), Gaps = 12/58 (20%)

Query: 6   VGLNQFKQCGPTIK------------PNSTATLDSPRYNRSLKNKDTNENTQENTPTH 51
           +GLNQ K+     K            PN    ++SP  N ++K KD   +  E  P +
Sbjct: 669 LGLNQNKKAAKLYKRERAQKRRNSSIPNGKLPMESPAQNFTIKEKDLELSDTEEPPNY 726


>Hs21361684 [A] KOG2138 Predicted RNA binding protein contains G-patch domain
          Length = 931

 Score = 26.6 bits (57), Expect = 6.9
 Identities = 11/32 (34%), Positives = 19/32 (59%)

Query: 16  PTIKPNSTATLDSPRYNRSLKNKDTNENTQEN 47
           P   PN+  TL+ P+  +  KNKD ++  +E+
Sbjct: 836 PVFCPNARQTLEVPQKEKHKKNKDKHKAKKEH 867


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.308    0.124    0.367 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,566,256
Number of Sequences: 60738
Number of extensions: 105679
Number of successful extensions: 238
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 236
Number of HSP's gapped (non-prelim): 4
length of query: 52
length of database: 30,389,216
effective HSP length: 28
effective length of query: 24
effective length of database: 28,688,552
effective search space: 688525248
effective search space used: 688525248
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)