ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIV4222   suspect: LH   S     KOG3228  Function unknown                                               Uncharacterized conserved protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIV4222 1432077  1432637 187  
         (187 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YDR163w [S] KOG3228 Uncharacterized conserved protein                  98   8e-21

>YDR163w [S] KOG3228 Uncharacterized conserved protein
          Length = 175

 Score = 97.8 bits (242), Expect = 8e-21
 Identities = 66/193 (34%), Positives = 93/193 (47%), Gaps = 24/193 (12%)

Query: 1   MTTSHRPQLEARNGAKNIEYIPTSTQHARLLPGHKEVKYRNTKKRVLNRKVESTPSEEAK 60
           MTTSHRPQLEAR+GAK   Y PT  +HARLLPGH  +KYR  K+      + +  ++E +
Sbjct: 1   MTTSHRPQLEARSGAKAAAYTPTGIEHARLLPGHTTLKYRKFKE---EENLRANCAQEDR 57

Query: 61  KRIKITGAEECSKDEEIQATXXXXXXXXXXXXXXXXXXXXXXWNKVKQERLDKKLREQRA 120
              K    EE   +EE Q                          K +++ L + L  Q+ 
Sbjct: 58  SNDK--SLEEAVMNEEKQDVVGSGNLQETRS------------EKDQKDSLQELLVTQKN 103

Query: 121 EITAAQNEEVTKPQKHG-----GWRSNTVFGRKGTVNQSASISEH-NSNGKGKYVNNITQ 174
           ++      E  +  K G      WR  T FGR   V +  +I EH        Y+N++T+
Sbjct: 104 KVEDKAELEGNEQLKGGNSSRRSWRKGTAFGRH-KVTKETNIKEHATKKSASGYINDMTK 162

Query: 175 SEYHKEFIRKHVK 187
           SEYH+EF+ KHV+
Sbjct: 163 SEYHQEFLHKHVR 175


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.307    0.124    0.343 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,013,863
Number of Sequences: 60738
Number of extensions: 359201
Number of successful extensions: 1068
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1066
Number of HSP's gapped (non-prelim): 1
length of query: 187
length of database: 30,389,216
effective HSP length: 100
effective length of query: 87
effective length of database: 24,315,416
effective search space: 2115441192
effective search space used: 2115441192
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)