ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV4246 normal R KOG2316 General function prediction only Predicted ATPase (PP-loop superfamily)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV4246 1439669 1441756 696
(696 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YLR143w_1 [R] KOG2316 Predicted ATPase (PP-loop superfamily) 362 1e-99
YLR143w_2 [J] KOG2317 Putative translation initiation inhibitor ... 271 3e-72
SPBC577.12_1 [R] KOG2316 Predicted ATPase (PP-loop superfamily) 236 7e-62
7292700_1 [R] KOG2316 Predicted ATPase (PP-loop superfamily) 212 1e-54
At3g04480_1 [R] KOG2316 Predicted ATPase (PP-loop superfamily) 209 9e-54
Hs18087809 [R] KOG2316 Predicted ATPase (PP-loop superfamily) 208 3e-53
CE24872 [R] KOG2316 Predicted ATPase (PP-loop superfamily) 204 5e-52
ECU08g1840 [R] KOG2316 Predicted ATPase (PP-loop superfamily) 141 3e-33
SPBC577.12_2 [J] KOG2317 Putative translation initiation inhibit... 100 1e-20
At3g04480_2 [J] KOG2317 Putative translation initiation inhibito... 68 4e-11
7292700_2 [J] KOG2317 Putative translation initiation inhibitor ... 68 5e-11
>YLR143w_1 [R] KOG2316 Predicted ATPase (PP-loop superfamily)
Length = 293
Score = 362 bits (929), Expect = 1e-99
Identities = 179/289 (61%), Positives = 221/289 (75%), Gaps = 3/289 (1%)
Query: 1 MKFVALISGGKDSNYNILHCLKQDHELIAFANLHPENEDEQELDSFMFQTVGHDLIRWYP 60
MKF+ALISGGKDS YNI HCLK +HELIA N++P+ +EQELDSFMFQTVGHDLI +Y
Sbjct: 1 MKFIALISGGKDSFYNIFHCLKNNHELIALGNIYPKESEEQELDSFMFQTVGHDLIDYYS 60
Query: 61 ECSGVPLYRQALHKNGSKNIALNYTETKDDEIEDLYKLLRKIQLDSPDLEAVSVGAILSS 120
+C GVPL+R+++ +N S N+ LNYT T+DDEIE+L++LLR ++ PDLEAVSVGAILSS
Sbjct: 61 KCIGVPLFRRSILRNTSNNVELNYTATQDDEIEELFELLRTVKDKIPDLEAVSVGAILSS 120
Query: 121 YQRTRVEDVCSRLGLTTLSYLWQRDQRELMQEMCSMSKDTIVTTDDCDNVGKLDARIIKV 180
YQRTRVE+VCSRLGL LSYLWQRDQ ELM EMC MSKD +D ++ K DARIIKV
Sbjct: 121 YQRTRVENVCSRLGLVVLSYLWQRDQAELMGEMCLMSKDVNNVENDTNSGNKFDARIIKV 180
Query: 181 AAIGLNQNHLGKSLPEILPTMLKLNSLYDVHICGEGGEFETMVLDTPFFKHGHLQLNSIN 240
AAIGLN+ HLG SLP + P + KLN LY VHICGEGGEFETMVLD PFF+HG+L+L
Sbjct: 181 AAIGLNEKHLGMSLPMMQPVLQKLNQLYQVHICGEGGEFETMVLDAPFFQHGYLEL---I 237
Query: 241 DVTDTSNDGVFAATFNVEYVPEALSPTKLEKELEKLPVPAVLNEKWYEM 289
D+ S+ V A V++ P LS + L +L++LPVP++ W ++
Sbjct: 238 DIVKCSDGEVHNARLKVKFQPRNLSKSFLLNQLDQLPVPSIFGNNWQDL 286
>YLR143w_2 [J] KOG2317 Putative translation initiation inhibitor UK114/IBM1
Length = 392
Score = 271 bits (692), Expect = 3e-72
Identities = 154/394 (39%), Positives = 238/394 (60%), Gaps = 19/394 (4%)
Query: 308 HNVSPSVP-VSINEVGKLLYISNIAPSKGESLKEKCLDVFSQLTSILSSRSIFACQIXXX 366
+++S ++P +IN+ LYISN+ K E+++++ D+F++L IL S I I
Sbjct: 11 NHMSNALPQTTINKTNDKLYISNLQSRKSETVEKQSEDIFTELADILHSNQIPRNHILSA 70
Query: 367 XXXXXDMNNFQEVNSYYNEYFNVTKIGPLPPARACVESSFLKHP--VQLSVVVDLSADCV 424
DM+NF ++N YNE+ +++K GPLPP+RACV S L VQLSVVVD V
Sbjct: 71 SLLIRDMSNFGKINKIYNEFLDLSKYGPLPPSRACVGSKCLPEDCHVQLSVVVD-----V 125
Query: 425 PTDNGIILNRSKDGLHVQGRSYWCPCNIGPYSQATWNQSDRNKVTYISGQIGLEPSSMKL 484
+N++K GLHVQGRSYW PCNIGPYSQ+TW D N+V++ISGQIGL P SM++
Sbjct: 126 KNTGKEKINKNKGGLHVQGRSYWAPCNIGPYSQSTWLNDDANQVSFISGQIGLVPQSMEI 185
Query: 485 WGDTTLLENPDIAEVVLSLRNYFTLSETVNSSIPLTMVCYISQSYVLPAVRSAWSLFAKE 544
G P ++VL+L+++ TL ET+ + L M CYIS VL +V W+ +
Sbjct: 186 LG------TPLTDQIVLALQHFDTLCETIGAQEKLLMTCYISDESVLDSVIKTWAFYCSN 239
Query: 545 LAEESELWFDQEPVGVDSLVIVKVSNLPKNALCEWTGMNCQNLAIEDDYDEDDLAAQIHM 604
+ S+LW D+ LV+VK+S LP+ A+ E+ G+ C+ L I DD D D + +
Sbjct: 240 MNHRSDLWMDKSDDVEKCLVLVKISELPRGAVAEFGGVTCKRL-IVDDNDSDKKEREEND 298
Query: 605 NL-TLKSQTDIELPNYAHDVIISENGFKRHFITLFLDSHEQLILTLSEC-KNAQITLFFS 662
++ T+ + ++ + + H+ +S G+ R+FIT F+DS E+L L L + K+AQITL+++
Sbjct: 299 DVSTVFQKLNLNIEGF-HNTTVSAFGYNRNFITGFVDSREELELILEKTPKSAQITLYYN 357
Query: 663 KDYAVPEYTHVEYIPVEQVYD-KSSPRAYGLVIK 695
+ + H+ Y PVE+++D + +GL I+
Sbjct: 358 PKEIITFHHHIGYYPVEKLFDYRGKEHRFGLHIR 391
>SPBC577.12_1 [R] KOG2316 Predicted ATPase (PP-loop superfamily)
Length = 276
Score = 236 bits (603), Expect = 7e-62
Identities = 132/290 (45%), Positives = 184/290 (62%), Gaps = 20/290 (6%)
Query: 1 MKFVALISGGKDSNYNILHCLKQDHELIAFANLHPENEDEQELDSFMFQTVGHDLIRWYP 60
MK + LISGGKDS +N++HC+ HE++A ANLHPE + + E+DSFM+Q+VGHD+I Y
Sbjct: 1 MKVLGLISGGKDSCFNLMHCVSLGHEVVALANLHPE-DGKDEIDSFMYQSVGHDVIPLYA 59
Query: 61 ECSGVPLYRQALHKNGSKNIALNYTETKDDEIEDLYKLLRKIQLDSPDLEAVSVGAILSS 120
EC +PLYR+ + S N L+Y T+ DE EDLY+L++++ + PDLEAVS GAILS+
Sbjct: 60 ECFDLPLYREKIGGQ-SINQNLDYQFTEKDETEDLYRLIKRVLTNHPDLEAVSTGAILST 118
Query: 121 YQRTRVEDVCSRLGLTTLSYLWQRDQRELMQEMCSMSKDTIVTTDDCDNVGKLDARIIKV 180
YQRTRVE+VC RLGL +LS+LWQ+DQ +L+ +M V L+A +IKV
Sbjct: 119 YQRTRVENVCKRLGLKSLSFLWQKDQEKLLNDMV---------------VSGLNAILIKV 163
Query: 181 AAIGLNQNHLGKSLPEILPTMLKLNSLYDVHICGEGGEFETMVLDTPFFKHGHLQLNSIN 240
AAIGL + LGKSL E+ +L LN +++H CGEGGE+ET+VLD P FK + L
Sbjct: 164 AAIGLTRKDLGKSLAEMQDKLLTLNKKFELHPCGEGGEYETLVLDCPLFKK-RIVLTDKE 222
Query: 241 DVTDTSNDGVFAATFNVEYVPEALSPTKLEKELEKLPVPAVLNEKWYEMY 290
V +S + + P L+ EL +P +L E++ +Y
Sbjct: 223 VVEHSSGEVCYLKVKACVKDKPEWQPISLKSEL--VPNEELLGEEYSHIY 270
>7292700_1 [R] KOG2316 Predicted ATPase (PP-loop superfamily)
Length = 416
Score = 212 bits (540), Expect = 1e-54
Identities = 117/231 (50%), Positives = 153/231 (65%), Gaps = 20/231 (8%)
Query: 1 MKFVALISGGKDSNYNILHCLKQDHELIAFANLHPENEDEQELDSFMFQTVGHDLIRWYP 60
M+ VA++SGGKDS YN++ C+ + HE++A ANLHP++ DE LDSFM+QTVGH I
Sbjct: 1 MRVVAMVSGGKDSCYNMMQCVAEGHEIVALANLHPKDRDE--LDSFMYQTVGHMGIEILA 58
Query: 61 ECSGVPLYRQALHKNGSKNIALNYTETKDDEIEDLYKLLRKIQLDSPDLEAVSVGAILSS 120
G+PLYR+ K S Y T DDE+EDLY LL + + ++AV+VGAILS
Sbjct: 59 SAMGLPLYRRET-KGKSTQTGKQYVPTDDDEVEDLYSLLETCKHEL-QVDAVAVGAILSD 116
Query: 121 YQRTRVEDVCSRLGLTTLSYLWQRDQRELMQEMCSMSKDTIVTTDDCDNVGKLDARIIKV 180
YQR RVE+VCSRL L +L+YLW+RDQ EL+QEM DC ++ A IIKV
Sbjct: 117 YQRVRVENVCSRLNLISLAYLWRRDQTELLQEMI-----------DC----QVHAIIIKV 161
Query: 181 AAIGL-NQNHLGKSLPEILPTMLKLNSLYDVHICGEGGEFETMVLDTPFFK 230
AA+GL HLGKSL E+ P +LK+ Y +++CGEGGE+ET LD P F+
Sbjct: 162 AALGLVPDRHLGKSLREMQPHLLKMRDKYGLNVCGEGGEYETFTLDCPLFR 212
>At3g04480_1 [R] KOG2316 Predicted ATPase (PP-loop superfamily)
Length = 280
Score = 209 bits (533), Expect = 9e-54
Identities = 116/274 (42%), Positives = 172/274 (62%), Gaps = 24/274 (8%)
Query: 1 MKFVALISGGKDSNYNILHCLKQDHELIAFANLHPENEDEQELDSFMFQTVGHDLIRWYP 60
MK VAL+SGGKDS Y ++ C++ HE++A ANL P ++ ELDS+M+QTVGH ++ Y
Sbjct: 1 MKVVALVSGGKDSCYAMMKCIQYGHEIVALANLLPVDDSVDELDSYMYQTVGHQILVGYA 60
Query: 61 ECSGVPLYRQALHKNGSKNIALNYTETKDDEIEDLYKLLRKIQLDSPDLEAVSVGAILSS 120
EC VPL+R+ + + S++ L+Y T DDE+ED++ LL +++ P + AVS GAI S
Sbjct: 61 ECMNVPLFRRRI-RGSSRHQKLSYQMTPDDEVEDMFVLLSEVKRQIPSITAVSSGAIASD 119
Query: 121 YQRTRVEDVCSRLGLTTLSYLWQRDQRELMQEMCSMSKDTIVTTDDCDNVGKLDARIIKV 180
YQR RVE +CSRLGL +L++LW++DQ L+Q+M + + A ++KV
Sbjct: 120 YQRLRVESICSRLGLVSLAFLWKQDQTLLLQDMIA---------------NGIKAILVKV 164
Query: 181 AAIGLN-QNHLGKSLPEILPTMLKLNSLYDVHICGEGGEFETMVLDTPFFKHGHLQLNSI 239
AAIGL+ HLGK L + P +LKL Y ++CGEGGE+ET+ LD P F + + L+
Sbjct: 165 AAIGLDPSKHLGKDLAFMEPYLLKLKEKYGSNVCGEGGEYETLTLDCPLFTNASIVLDEY 224
Query: 240 NDVTDTSND----GVF-AATFNVEYV--PEALSP 266
V + + GV +TF++E P++ SP
Sbjct: 225 QVVLHSPDSIAPVGVLHPSTFHLEKKGNPDSHSP 258
>Hs18087809 [R] KOG2316 Predicted ATPase (PP-loop superfamily)
Length = 267
Score = 208 bits (529), Expect = 3e-53
Identities = 111/233 (47%), Positives = 155/233 (65%), Gaps = 20/233 (8%)
Query: 1 MKFVALISGGKDSNYNILHCLKQDHELIAFANLHP-ENE-DEQELDSFMFQTVGHDLIRW 58
M+ ALISGGKDS YN++ C+ H+++A ANL P EN+ ELDS+M+QTVGH I
Sbjct: 1 MRVAALISGGKDSCYNMMQCIAAGHQIVALANLRPAENQVGSDELDSYMYQTVGHHAIDL 60
Query: 59 YPECSGVPLYRQALHKNGSKNIALNYTETKDDEIEDLYKLLRKIQLDSPDLEAVSVGAIL 118
Y E +PLYR+ + + S + YT+ + DE+EDLY+LL+ ++ + ++E +SVGAIL
Sbjct: 61 YAEAMALPLYRRTI-RGRSLDTRQVYTKCEGDEVEDLYELLKLVK-EKEEVEGISVGAIL 118
Query: 119 SSYQRTRVEDVCSRLGLTTLSYLWQRDQRELMQEMCSMSKDTIVTTDDCDNVGKLDARII 178
S YQR RVE+VC RL L L+YLWQR+Q +L++EM S + A II
Sbjct: 119 SDYQRIRVENVCKRLNLQPLAYLWQRNQEDLLREMIS---------------SNIQAMII 163
Query: 179 KVAAIGLN-QNHLGKSLPEILPTMLKLNSLYDVHICGEGGEFETMVLDTPFFK 230
KVAA+GL+ HLGK+L ++ P +++L+ Y VH+CGEGGE+ET LD P FK
Sbjct: 164 KVAALGLDPDKHLGKTLDQMEPYLIELSKKYGVHVCGEGGEYETFTLDCPLFK 216
>CE24872 [R] KOG2316 Predicted ATPase (PP-loop superfamily)
Length = 230
Score = 204 bits (518), Expect = 5e-52
Identities = 108/231 (46%), Positives = 148/231 (63%), Gaps = 17/231 (7%)
Query: 1 MKFVALISGGKDSNYNILHCLKQDHELIAFANLHPENEDEQ-ELDSFMFQTVGHDLIRWY 59
M+ V LISGGKDS YN++ +++ H+++A ANLHP + + ELDS+M+Q+VG D + Y
Sbjct: 1 MQVVGLISGGKDSCYNLMCAVREGHQIVALANLHPPKDAKSDELDSYMYQSVGADGVELY 60
Query: 60 PECSGVPLYRQALHKNGSKNIALNYTETKDDEIEDLYKLLRKIQLDSPDLEAVSVGAILS 119
E +PLYR+ + KN +Y +T DE+EDL++LL +++ P+++ VS GAILS
Sbjct: 61 GEAMQLPLYRREI-TGEPKNQKSDYEKTDGDEVEDLFELLCEVKKHHPEVKGVSAGAILS 119
Query: 120 SYQRTRVEDVCSRLGLTTLSYLWQRDQRELMQEMCSMSKDTIVTTDDCDNVGKLDARIIK 179
SYQ+ RVED+C RL L L +LW+R+Q L+ EM LDA +IK
Sbjct: 120 SYQKVRVEDICRRLDLVPLCFLWEREQNGLLAEMVE---------------NGLDAILIK 164
Query: 180 VAAIGLNQNHLGKSLPEILPTMLKLNSLYDVHICGEGGEFETMVLDTPFFK 230
VAAIGL + HLGK+L E+ P M L Y VH CGEGGEFE+ V D P FK
Sbjct: 165 VAAIGLGEQHLGKTLSEMAPIMKVLQDKYGVHPCGEGGEFESFVRDCPLFK 215
>ECU08g1840 [R] KOG2316 Predicted ATPase (PP-loop superfamily)
Length = 247
Score = 141 bits (356), Expect = 3e-33
Identities = 89/231 (38%), Positives = 134/231 (57%), Gaps = 23/231 (9%)
Query: 1 MKFVALISGGKDSNYNILHCLKQ-DHELIAFANLHPENEDEQELDSFMFQTVGHDLIRWY 59
M+++AL+SGGKDS + +HCL++ H ++ ++ EN + DS+M+QTVG ++
Sbjct: 1 MRYLALVSGGKDS-VHAMHCLQRLGHHVVGLLHMRCENGYQ---DSYMYQTVGSEVANLL 56
Query: 60 PECSGVPLYRQALHKNGSKNIALNYTETKDDEIEDLYKLLRKIQLDSPDLEAVSVGAILS 119
EC VP++ + S N +L Y + DE+EDLY + ++ + E VS GAILS
Sbjct: 57 GECLRVPVFI-CRTRCRSINQSLQYDREEGDEVEDLYAAIAHVK-EKICFEGVSSGAILS 114
Query: 120 SYQRTRVEDVCSRLGLTTLSYLWQRDQRELMQEMCSMSKDTIVTTDDCDNVGKLDARIIK 179
YQ+ RVE+VC+RL L LS LW DQ L+ EM + +DARI+K
Sbjct: 115 RYQKNRVENVCNRLSLECLSPLWGMDQESLLTEMI---------------LSGMDARIVK 159
Query: 180 VAAIGLNQNHLGKSLPEILPTMLKLNSLYDVHICGEGGEFETMVLDTPFFK 230
VA+ L + + SL E+ LK + +++ CGEGGE+ET+VLD P F+
Sbjct: 160 VASPLLGRECINMSLDEVY-ERLKTSPSSEINFCGEGGEYETVVLDCPMFE 209
>SPBC577.12_2 [J] KOG2317 Putative translation initiation inhibitor UK114/IBM1
Length = 330
Score = 99.8 bits (247), Expect = 1e-20
Identities = 75/260 (28%), Positives = 115/260 (43%), Gaps = 40/260 (15%)
Query: 322 GKLLYISNIAPSKGE--SLKEKCLDVFSQLTSILSSRSIFACQIXXXXXXXXDMNNFQEV 379
G L + N+ +KG + + + + L +L + + M+ F E
Sbjct: 29 GSFLVLGNVVATKGSYNTFQGEAESAINNLNELLGTYGYSNKNVYFVTVILSSMSKFAEF 88
Query: 380 NSYYNEYFNVTKIGPLPPARACVESSFLKHPVQLSVVVDLSADCVPTDNGIILNRSKDGL 439
NS YN+YF+ T PP+R+CV + L+ + C+ D K L
Sbjct: 89 NSVYNKYFDFTN----PPSRSCVAAP-------LASEYRIVMSCIVGDV-----TEKRAL 132
Query: 440 HVQGRSYWCPCNIGPYSQATWNQSDRNKVTYISGQIGLEPSSMKLWGDTTLLENPDIAEV 499
HVQG+SYW P NIGPYSQ+ N V +ISGQIGL PS M+ L + I E+
Sbjct: 133 HVQGQSYWAPANIGPYSQSIC----ANGVVFISGQIGLIPSVME------LKLHDKIFEM 182
Query: 500 VLSLRNYFTLSETVNSSIPLTMVCYISQSYVLPAVRSAWSLFAKELAEESELWFDQEPVG 559
VL+L++ +++ + + + Y+ S V WS + K E S
Sbjct: 183 VLALQHANRVAKAMRVGSLIACLAYVCDSRDADCVVKIWSEYTKNTGESS---------- 232
Query: 560 VDSLVIVKVSNLPKNALCEW 579
+++ V LP+NA EW
Sbjct: 233 --PVLVALVDALPRNASVEW 250
>At3g04480_2 [J] KOG2317 Putative translation initiation inhibitor UK114/IBM1
Length = 435
Score = 68.2 bits (165), Expect = 4e-11
Identities = 73/267 (27%), Positives = 115/267 (42%), Gaps = 32/267 (11%)
Query: 336 ESLKEKCLDVFSQLTSILSSRSIFACQIXXXXXXXXDMNNFQEVNSYYNEYFNVTKIGPL 395
ES KE V ++L S L + DM+ F N Y ++ K
Sbjct: 39 ESSKEDLETVLTELESQLLKHGYNWQHVLYIHLYISDMSEFAVANETYVKFITQEKCPFG 98
Query: 396 PPARACVESSFLKHPVQLSVVVDLSADCVPTDNGIILNRSKDGLHVQGRSYWCPCNIGPY 455
P+R+ +E ++ + + + L A+ + SK LHVQ S W P IGPY
Sbjct: 99 VPSRSTIELPLVQAGLGKAYIEVLVAN----------DESKRVLHVQSISCWAPSCIGPY 148
Query: 456 SQATWNQSDRNKVTYISGQIGLEPSSMKLWGDTTLLENPDIAEVVLSLRNYFTLSETVNS 515
SQAT +QS V +++GQ+GL+P +M L + IAE+ +L N ++E+ N
Sbjct: 149 SQATLHQS----VLHMAGQLGLDPPTMNLQTEGA------IAELNQALTNSEAIAESFNC 198
Query: 516 SIPLTMVCYISQSYVLPAVRSAWSLFAK-----ELAEESELWFDQEPVGVDSLVIVKVSN 570
SI + + ++ L K LA+ S + V + + V +
Sbjct: 199 SISSSAILFVVFCSARTKQSERNQLHEKFVTFLGLAKSSR---RVQNVLDPMFLYILVPD 255
Query: 571 LPKNALCEWTGMNCQNLAIEDDYDEDD 597
LPK AL E + L +E+D D +D
Sbjct: 256 LPKRALVEVKPI----LYVEEDTDTED 278
>7292700_2 [J] KOG2317 Putative translation initiation inhibitor UK114/IBM1
Length = 431
Score = 67.8 bits (164), Expect = 5e-11
Identities = 58/234 (24%), Positives = 97/234 (40%), Gaps = 37/234 (15%)
Query: 325 LYISNIAPSKGESLKEKCLDVFSQLTSILSSRSIFACQIXXXXXXXXDMNNFQEVNSYYN 384
++++ I S E +++ L + ++ + + + +N Y+
Sbjct: 1 MWLAGIQGSGTEGIEQGMQQALDTLRDLCQAKGYDLQDLCYVTLYVRSIGEYPLLNRVYH 60
Query: 385 EYFNVTKIGPLPPARACVESSFLKHPVQLSVVVDLSADCVPTDNGI-------------- 430
F+ PP R CVE P VV++ A P I
Sbjct: 61 RAFDFHN----PPTRVCVECPL---PDGCHVVMEAIAYRQPVAGTISSAEERDREGEETA 113
Query: 431 --ILNRSKDGLHVQGRSYWCPCNIGPYSQATWNQSDRNKVTYISGQIGLEPSSMKLWGDT 488
+LN ++ +HVQG S+W P NIGPYSQ+T +TYISGQI L P SM
Sbjct: 114 AALLNGRRNTMHVQGISHWAPANIGPYSQST----RIGDITYISGQIALVPGSM------ 163
Query: 489 TLLENPDIAEVVLSLRNYFTLSETVNSSIPLTMV----CYISQSYVLPAVRSAW 538
T++E + L+LR+ +++ +N+ L V C+++ + R W
Sbjct: 164 TIIEGGIRPQCKLTLRHISRIAKAMNAHGQLRDVVHGICFVTHPAFIGEARRQW 217
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.135 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,732,459
Number of Sequences: 60738
Number of extensions: 1883804
Number of successful extensions: 4715
Number of sequences better than 1.0e-05: 11
Number of HSP's better than 0.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 4674
Number of HSP's gapped (non-prelim): 12
length of query: 696
length of database: 30,389,216
effective HSP length: 113
effective length of query: 583
effective length of database: 23,525,822
effective search space: 13715554226
effective search space used: 13715554226
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)