ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV4293 good K KOG3423 Transcription Transcription initiation factor TFIID, subunit TAF10 (also component of histone acetyltransferase SAGA)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV4293 1459696 1460271 192
(192 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDR167w [K] KOG3423 Transcription initiation factor TFIID subuni... 206 1e-53
SPBC21H7.02 [K] KOG3423 Transcription initiation factor TFIID su... 116 2e-26
At4g31720 [K] KOG3423 Transcription initiation factor TFIID subu... 87 2e-17
Hs5454106 [K] KOG3423 Transcription initiation factor TFIID subu... 82 5e-16
7295912 [K] KOG3423 Transcription initiation factor TFIID subuni... 78 7e-15
7295911 [K] KOG3423 Transcription initiation factor TFIID subuni... 69 5e-12
ECU11g0830 [K] KOG3423 Transcription initiation factor TFIID sub... 64 1e-10
CE28580 [K] KOG3423 Transcription initiation factor TFIID subuni... 54 1e-07
CE07323 [K] KOG3423 Transcription initiation factor TFIID subuni... 54 1e-07
>YDR167w [K] KOG3423 Transcription initiation factor TFIID subunit TAF10
(also component of histone acetyltransferase SAGA)
Length = 206
Score = 206 bits (525), Expect = 1e-53
Identities = 107/172 (62%), Positives = 128/172 (74%), Gaps = 6/172 (3%)
Query: 27 DNEALFARAEQEGEEGKTKIEDGSNRLFELPEFTRKDKTLQEILDLMEDNPPIIPDAVID 86
DN+ A ++ ++ + ++DGS F +PEFTRKDKTL+EIL++M+ PPIIPDAVID
Sbjct: 35 DNDDSVAENMKKKQKREAVVDDGSENAFGIPEFTRKDKTLEEILEMMDSTPPIIPDAVID 94
Query: 87 YYMTKNGFDCSDVKVKRLLALATQKFVSDIAADAYEYSRIRSAITVHNSNNGQARARXXX 146
YY+TKNGF+ +DV+VKRLLALATQKFVSDIA DAYEYSRIRS++ V N+NN QARAR
Sbjct: 95 YYLTKNGFNVADVRVKRLLALATQKFVSDIAKDAYEYSRIRSSVAVSNANNSQARARQLL 154
Query: 147 ------XXXXXXXXXXXXNEKTNANKVVLTVNDLSSAVAEYGLNISRPDFYR 192
NEKT A+KVVLTVNDLSSAVAEYGLNI RPDFYR
Sbjct: 155 QGQQQPGVQQISQQQHQQNEKTTASKVVLTVNDLSSAVAEYGLNIGRPDFYR 206
>SPBC21H7.02 [K] KOG3423 Transcription initiation factor TFIID subunit TAF10
(also component of histone acetyltransferase SAGA)
Length = 215
Score = 116 bits (290), Expect = 2e-26
Identities = 56/131 (42%), Positives = 81/131 (61%), Gaps = 4/131 (3%)
Query: 62 KDKTLQEILDLMEDNPPIIPDAVIDYYMTKNGFDCSDVKVKRLLALATQKFVSDIAADAY 121
KDKTL+ L M+D P+IPD ++DYY++ +GF C D ++K+LL L QKF+SD+A DAY
Sbjct: 89 KDKTLENFLAQMDDYSPLIPDVLLDYYLSLSGFKCVDPRLKKLLGLTAQKFISDVAQDAY 148
Query: 122 EYSRIRSAITVHNSNNGQARARXXXXXXXXXXXXXXXNEKTNANKVVLTVNDLSSAVAEY 181
+YS+IR+ +SN + + K VLTV+DLS+A+ EY
Sbjct: 149 QYSKIRTG----SSNASSTTFGAQNFGAGGASGIGSSGRRGDRGKTVLTVDDLSAALNEY 204
Query: 182 GLNISRPDFYR 192
G+N+ RPDF+R
Sbjct: 205 GINLKRPDFFR 215
>At4g31720 [K] KOG3423 Transcription initiation factor TFIID subunit TAF10
(also component of histone acetyltransferase SAGA)
Length = 134
Score = 86.7 bits (213), Expect = 2e-17
Identities = 44/129 (34%), Positives = 73/129 (56%), Gaps = 24/129 (18%)
Query: 63 DKTLQEILDLMEDNPPIIPDAVIDYYMTKNGFDCSDVKVKRLLALATQKFVSDIAADAYE 122
D L E L + D P IPD ++++Y+ K+GF C DV++ RL+A+ATQKFV+D+A+DA +
Sbjct: 15 DAALTEFLASLMDYTPTIPDDLVEHYLAKSGFQCPDVRLIRLVAVATQKFVADVASDALQ 74
Query: 123 YSRIRSAITVHNSNNGQARARXXXXXXXXXXXXXXXNEKTNANKVVLTVNDLSSAVAEYG 182
+ + R A V + ++ ++VLT+ DLS A+ EYG
Sbjct: 75 HCKARPAPVVKD------------------------KKQQKDKRLVLTMEDLSKALREYG 110
Query: 183 LNISRPDFY 191
+N+ P+++
Sbjct: 111 VNVKHPEYF 119
>Hs5454106 [K] KOG3423 Transcription initiation factor TFIID subunit TAF10
(also component of histone acetyltransferase SAGA)
Length = 218
Score = 82.0 bits (201), Expect = 5e-16
Identities = 48/149 (32%), Positives = 79/149 (52%), Gaps = 31/149 (20%)
Query: 50 SNRLFELPEFTRKD-------KTLQEILDLMEDNPPIIPDAVIDYYMTKNGFDCSDVKVK 102
SN ++ LP D L + L +ED P IPDAV YY+ + GF+ SD ++
Sbjct: 93 SNGVYVLPSAANGDVKPVVSSTPLVDFLMQLEDYTPTIPDAVTGYYLNRAGFEASDPRII 152
Query: 103 RLLALATQKFVSDIAADAYEYSRIRSAITVHNSNNGQARARXXXXXXXXXXXXXXXNEKT 162
RL++LA QKF+SDIA DA ++ +++ + +G +R+ K+
Sbjct: 153 RLISLAAQKFISDIANDALQHCKMK------GTASGSSRS------------------KS 188
Query: 163 NANKVVLTVNDLSSAVAEYGLNISRPDFY 191
K LT+ DL+ A++EYG+N+ +P ++
Sbjct: 189 KDRKYTLTMEDLTPALSEYGINVKKPHYF 217
>7295912 [K] KOG3423 Transcription initiation factor TFIID subunit TAF10
(also component of histone acetyltransferase SAGA)
Length = 146
Score = 78.2 bits (191), Expect = 7e-15
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 21/131 (16%)
Query: 60 TRKDKTLQEILDLMEDNPPIIPDAVIDYYMTKNGFDCSDVKVKRLLALATQKFVSDIAAD 119
T L + + +ED P+IPDAV +Y+ GF D ++ RL++LA QK++SDI D
Sbjct: 35 TTPSSHLSDFMSQLEDYTPLIPDAVTSHYLNMGGFQSDDKRIVRLISLAAQKYMSDIIDD 94
Query: 120 AYEYSRIRSAITVHNSNNGQARARXXXXXXXXXXXXXXXNEKTNANKVVLTVNDLSSAVA 179
A ++S+ R+ + N+ G K K LT+ DL A+A
Sbjct: 95 ALQHSKARTHMQTTNTPGG---------------------SKAKDRKFTLTMEDLQPALA 133
Query: 180 EYGLNISRPDF 190
+YG+N+ + D+
Sbjct: 134 DYGINVRKVDY 144
>7295911 [K] KOG3423 Transcription initiation factor TFIID subunit TAF10
(also component of histone acetyltransferase SAGA)
Length = 167
Score = 68.6 bits (166), Expect = 5e-12
Identities = 41/165 (24%), Positives = 83/165 (49%), Gaps = 24/165 (14%)
Query: 27 DNEALFARAEQEGEEGKTKIEDGSNRLFELPEFTRKDKTLQEILDLMEDNPPIIPDAVID 86
D ++ ++E +E + +E E+P T ++ + E++ +ED P IPDA+
Sbjct: 26 DIDSPLMQSELHSDEEQPDVE-------EVP-LTTEESEMDELIKQLEDYSPTIPDALTM 77
Query: 87 YYMTKNGFDCSDVKVKRLLALATQKFVSDIAADAYEYSRIRSAITVHNSNNGQARARXXX 146
+ + GF D K+ RL++++ QKF+SDIA DA ++ + R+ H+S + ++ +
Sbjct: 78 HILKTAGFCTVDPKIVRLVSVSAQKFISDIANDALQHCKTRTTNIQHSSGHSSSKDK--- 134
Query: 147 XXXXXXXXXXXXNEKTNANKVVLTVNDLSSAVAEYGLNISRPDFY 191
+ K L + DL A+A++G+ + +P ++
Sbjct: 135 -------------KNPKDRKYTLAMEDLVPALADHGITMRKPQYF 166
>ECU11g0830 [K] KOG3423 Transcription initiation factor TFIID subunit TAF10
(also component of histone acetyltransferase SAGA)
Length = 133
Score = 64.3 bits (155), Expect = 1e-10
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 24/130 (18%)
Query: 62 KDKTLQEILDLMEDNPPIIPDAVIDYYMTKNGFDCSDVKVKRLLALATQKFVSDIAADAY 121
K++ E+ ++ P++P++V DY+M K G SD VK+L++L KFV+DIA ++
Sbjct: 27 KEEEFNELKQNLDSYTPLLPESVTDYFMEKAGVVTSDQSVKKLVSLLAHKFVTDIAVSSF 86
Query: 122 EYSRIRSAITVHNSNNGQARARXXXXXXXXXXXXXXXNEKTNANKVVLTVNDLSSAVAEY 181
+Y RI N Q R K + DL A+ E
Sbjct: 87 QYHRI-------NQKAAQKDKRF-----------------AKEKKPTFQLVDLEKALEEV 122
Query: 182 GLNISRPDFY 191
G++ISRP +Y
Sbjct: 123 GISISRPHYY 132
>CE28580 [K] KOG3423 Transcription initiation factor TFIID subunit TAF10
(also component of histone acetyltransferase SAGA)
Length = 179
Score = 54.3 bits (129), Expect = 1e-07
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 26/124 (20%)
Query: 68 EILDLMEDNPPIIPDAVIDYYMTKNGFDCSDVKVKRLLALATQKFVSDIAADAYEYSRIR 127
E ++ + D PP IPD+V +++ G D SD +V R+++LA QK VSDI DA +R++
Sbjct: 81 EFINQLADYPPTIPDSVTLHFLKSAGVDGSDPRVTRMISLAAQKHVSDIILDAMTSARMK 140
Query: 128 SAITVHNSNNGQARARXXXXXXXXXXXXXXXNEKTNANKVVLTVNDLSSAVAEYGLNISR 187
GQ + + T K LT L + EYG +R
Sbjct: 141 GL--------GQTK------------------KGTKDTKYTLTEELLDEILKEYGHQNTR 174
Query: 188 PDFY 191
P ++
Sbjct: 175 PPYH 178
>CE07323 [K] KOG3423 Transcription initiation factor TFIID subunit TAF10
(also component of histone acetyltransferase SAGA)
Length = 176
Score = 54.3 bits (129), Expect = 1e-07
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 26/124 (20%)
Query: 68 EILDLMEDNPPIIPDAVIDYYMTKNGFDCSDVKVKRLLALATQKFVSDIAADAYEYSRIR 127
E ++ + D PP IPD+V +++ G D SD +V R+++LA QK VSDI DA +R++
Sbjct: 78 EFINQLADYPPTIPDSVTLHFLKSAGVDGSDPRVTRMISLAAQKHVSDIILDAMTSARMK 137
Query: 128 SAITVHNSNNGQARARXXXXXXXXXXXXXXXNEKTNANKVVLTVNDLSSAVAEYGLNISR 187
GQ + + T K LT L + EYG +R
Sbjct: 138 GL--------GQTK------------------KGTKDTKYTLTEELLDEILKEYGHQNTR 171
Query: 188 PDFY 191
P ++
Sbjct: 172 PPYH 175
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.314 0.132 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,105,356
Number of Sequences: 60738
Number of extensions: 323384
Number of successful extensions: 750
Number of sequences better than 1.0e-05: 9
Number of HSP's better than 0.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 734
Number of HSP's gapped (non-prelim): 9
length of query: 192
length of database: 30,389,216
effective HSP length: 100
effective length of query: 92
effective length of database: 24,315,416
effective search space: 2237018272
effective search space used: 2237018272
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)