ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV4365 good H KOG1284 Coenzyme transport and metabolism Bifunctional GTP cyclohydrolase II/3,4-dihydroxy-2butanone-4-phosphate synthase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIV4365 1484192  1485487 432  
         (432 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1002.19 [H] KOG1284 Bifunctional GTP cyclohydrolase II/34-di...   531   e-151
At5g64300 [H] KOG1284 Bifunctional GTP cyclohydrolase II/34-dihy...    58   2e-08
At5g59750 [H] KOG1284 Bifunctional GTP cyclohydrolase II/34-dihy...    57   5e-08

>SPAC1002.19 [H] KOG1284 Bifunctional GTP cyclohydrolase
           II/34-dihydroxy-2butanone-4-phosphate synthase
          Length = 439

 Score =  531 bits (1368), Expect = e-151
 Identities = 258/423 (60%), Positives = 319/423 (74%), Gaps = 7/423 (1%)

Query: 9   KEVEQHIKATPVNDVLLTTYPEDS--SPIPLNWGAADCQERGPVVPSRNKSGISKHNCIG 66
           +EV++ + + PV   +LTTYP  S   P P+NWGAA  +ERGP+  +R+   +   N +G
Sbjct: 22  EEVKKPLYSRPV---VLTTYPSQSRIDPFPMNWGAATAEERGPITVARSIETLPHRNAVG 78

Query: 67  AHAGPYCIYNALAIGSNQLKRDHIPDYTNAQPVFTIPEQPSWFNNRDIVSMDPFGHLTPY 126
           AH G Y +YNALA+    L  DH P++   +P F  PE  SW + + IV+MDP+GHLTP 
Sbjct: 79  AHGGSYSVYNALAVAGGFLPPDHRPNFELTEPTFDFPELDSWHDPKKIVAMDPYGHLTPS 138

Query: 127 LFDDVAKSANVDIRPTIAITKATMQLLELKEAVDKGELKIDGNIIVNSNGDLSVSKIAVE 186
           +F         D+RPTIAIT+A +Q+ E++ +V+ G L IDG I++N  GD++V+K+AVE
Sbjct: 139 VFKKYLDEG-YDVRPTIAITRAHLQVTEIQRSVENGSLPIDGKIVLNEKGDIAVTKVAVE 197

Query: 187 PVWYLPGVAERFGITEEELRKCLFEDTNGMYPELITRPDIKTYMPPIGGLTVYIFGNPQN 246
           PVWYLPGVAERFG+ E  LR+ LFE   G YPELITRPDIK ++PPIGGLT YIFG P+ 
Sbjct: 198 PVWYLPGVAERFGVDEVTLRRALFEQMGGAYPELITRPDIKVFLPPIGGLTAYIFGPPEY 257

Query: 247 ISNPEKKIALRVHDECNGSDVFGSDICTCRPYLMFGIIEAVKEAQNGGTGLVIYFRKEGR 306
           +S+  K +A+RVHDECNGSDVF SDICTCRPYL FGI EA KEAQNGG GLV+YFRKEGR
Sbjct: 258 LSDTSKSLAVRVHDECNGSDVFQSDICTCRPYLTFGIEEAAKEAQNGGAGLVVYFRKEGR 317

Query: 307 ALGEVTKYLVYNARKRGGDTADEYFHRTECIAGVRDMRFQQLMPDVLKWLGISKIDKMLS 366
           ALGEV KYLVYN RKR GD+A+ YF RTE +AGVRDMRFQ LMPD+L W GI KID+MLS
Sbjct: 318 ALGEVVKYLVYNKRKRTGDSAENYFKRTEELAGVRDMRFQALMPDILHWFGIKKIDRMLS 377

Query: 367 MSNMKYDAIVDQGIEIVERIPIPDEMIPPDSRVEIDAKINSGYFSSEKAPTKEELQSVHG 426
           MSNMK+DAIV QGI+I+ RI IPD++IP DS+VEIDAKI SGYF SEK  T+++L  VHG
Sbjct: 378 MSNMKHDAIVGQGIKILNRITIPDDLIPEDSQVEIDAKIQSGYF-SEKKVTEDDLSCVHG 436

Query: 427 RLW 429
           R W
Sbjct: 437 RHW 439


>At5g64300 [H] KOG1284 Bifunctional GTP cyclohydrolase
           II/34-dihydroxy-2butanone-4-phosphate synthase
          Length = 543

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 40/136 (29%), Positives = 68/136 (49%), Gaps = 10/136 (7%)

Query: 254 IALRVHDECNGSDVFGSDICTCRPYLMFGIIEAVKEAQNGGTGLVIYFR-KEGRALGEVT 312
           I +RVH EC   D+FGS  C C   L      ++++ +  G G+++Y R  EGR +G   
Sbjct: 376 ILVRVHSECLTGDIFGSARCDCGNQLAL----SMQQIEATGRGVLVYLRGHEGRGIGLGH 431

Query: 313 KYLVYNARKRGGDTADEYFHRTECIAGVRDMRFQQLMPDVLKWLGISKIDKMLSMSNMKY 372
           K   YN +  G DT +      E +    D R   +   +++ LG+  + K+++ +  KY
Sbjct: 432 KLRAYNLQDAGRDTVE----ANEELGLPVDSREYGIGAQIIRDLGVRTM-KLMTNNPAKY 486

Query: 373 DAIVDQGIEIVERIPI 388
             +   G+ IV R+P+
Sbjct: 487 VGLKGYGLAIVGRVPL 502


>At5g59750 [H] KOG1284 Bifunctional GTP cyclohydrolase
           II/34-dihydroxy-2butanone-4-phosphate synthase
          Length = 508

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 11/144 (7%)

Query: 246 NISNPEKKIALRVHDECNGSDVFGSDICTCRPYLMFGIIEAVKEAQNGGTGLVIYFR-KE 304
           N+ N E  I +RVH EC   D+FGS  C C   L      A++  +  G G+V+Y R  E
Sbjct: 342 NVGNGED-ILVRVHSECLTGDIFGSARCDCGNQLDL----AMELIEKEGRGVVVYLRGHE 396

Query: 305 GRALGEVTKYLVYNARKRGGDTADEYFHRTECIAGVRDMRFQQLMPDVLKWLGISKIDKM 364
           GR +G   K   YN +  G DT          I    D R   +   +L+ +G+  + ++
Sbjct: 397 GRGIGLGHKLRAYNLQDEGHDTVQANVELGLSI----DSREYGIGAQMLRDIGVRTM-RL 451

Query: 365 LSMSNMKYDAIVDQGIEIVERIPI 388
           ++ +  K+  +   G+ +V R+P+
Sbjct: 452 MTNNPAKFTGLKGYGLAVVGRVPV 475


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.318    0.138    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,979,185
Number of Sequences: 60738
Number of extensions: 1267797
Number of successful extensions: 2542
Number of sequences better than 1.0e-05: 3
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2536
Number of HSP's gapped (non-prelim): 3
length of query: 432
length of database: 30,389,216
effective HSP length: 109
effective length of query: 323
effective length of database: 23,768,774
effective search space: 7677314002
effective search space used: 7677314002
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)