ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV4584 good K KOG1534 Transcription Putative transcription factor FET5
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV4584 1565277 1564375 -301
(301 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YLR243w [K] KOG1534 Putative transcription factor FET5 440 e-123
SPAC4D7.12c [K] KOG1534 Putative transcription factor FET5 365 e-101
HsM9994189 [K] KOG1534 Putative transcription factor FET5 239 3e-63
Hs21361523 [K] KOG1534 Putative transcription factor FET5 239 4e-63
CE23026 [K] KOG1534 Putative transcription factor FET5 226 4e-59
At4g12790 [K] KOG1534 Putative transcription factor FET5 220 2e-57
Hs8922366 [R] KOG1533 Predicted GTPase 175 8e-44
7298847 [K] KOG1534 Putative transcription factor FET5 169 4e-42
At5g22370 [R] KOG1533 Predicted GTPase 167 2e-41
CE07684 [R] KOG1533 Predicted GTPase 163 2e-40
ECU07g0540 [K] KOG1534 Putative transcription factor FET5 162 5e-40
YOR262w [R] KOG1533 Predicted GTPase 161 9e-40
7294480 [R] KOG1533 Predicted GTPase 158 1e-38
SPAC144.07c [R] KOG1533 Predicted GTPase 155 9e-38
CE01182 [L] KOG1532 GTPase XAB1 interacts with DNA repair protei... 90 3e-18
Hs14149629 [L] KOG1532 GTPase XAB1 interacts with DNA repair pro... 89 6e-18
SPBC119.15 [L] KOG1532 GTPase XAB1 interacts with DNA repair pro... 86 5e-17
YJR072c [L] KOG1532 GTPase XAB1 interacts with DNA repair protei... 80 4e-15
At4g21800 [L] KOG1532 GTPase XAB1 interacts with DNA repair prot... 76 7e-14
7290105 [L] KOG1532 GTPase XAB1 interacts with DNA repair protei... 75 2e-13
ECU06g1300 [R] KOG1533 Predicted GTPase 73 4e-13
ECU02g1430 [L] KOG1532 GTPase XAB1 interacts with DNA repair pro... 69 6e-12
>YLR243w [K] KOG1534 Putative transcription factor FET5
Length = 272
Score = 440 bits (1132), Expect = e-123
Identities = 213/272 (78%), Positives = 239/272 (87%), Gaps = 2/272 (0%)
Query: 31 MSRXXXXXXXXXXXXKSTFCNAIISHMQSIGRRAHIVNLDPAAEATKYEFTIDIRDLISL 90
MSR KSTFCN+IISHMQ++GRRAHIVNLDPAAEATKYEFTIDIRDLISL
Sbjct: 1 MSRVGVMVLGPAGAGKSTFCNSIISHMQTVGRRAHIVNLDPAAEATKYEFTIDIRDLISL 60
Query: 91 EDVMEEFGLGPNGSLIYCFEYLLNNLDWLDEEIGDYNDEYLIFDCPGQIELYTHIPVLPT 150
+DVMEE LGPNG+LIYCFEYLL NLDWLDEEIGD+NDEYLIFDCPGQIELYTHIPVLP
Sbjct: 61 DDVMEEMDLGPNGALIYCFEYLLKNLDWLDEEIGDFNDEYLIFDCPGQIELYTHIPVLPN 120
Query: 151 IVRHLQNQLNFNLCATYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINILSKLDLVKD 210
IVRHL QLNFNLCATYLLEAPFVID+SKFFSGALSAMSAMILLELPHIN+LSKLDL+K
Sbjct: 121 IVRHLTQQLNFNLCATYLLEAPFVIDSSKFFSGALSAMSAMILLELPHINVLSKLDLIKG 180
Query: 211 SHNKKALKKFLNPDPLLL--TDKVNEETNPKFHKLNEAIANLVDDFGMVQFLPLEAKNPE 268
NKK LK+FLNPD +LL T+ +N+ +NPKF +LN+ IANLVDDFGMVQFLPLE+ NP+
Sbjct: 181 DINKKKLKRFLNPDAMLLMETEGMNQASNPKFLRLNQCIANLVDDFGMVQFLPLESNNPD 240
Query: 269 SVSTILSYIDDVTQWAEAQEPKEPNDQIEIDD 300
S+ TILSY+DD+TQWAE QE KEPNDQI++++
Sbjct: 241 SIETILSYVDDITQWAEGQEQKEPNDQIDVEE 272
>SPAC4D7.12c [K] KOG1534 Putative transcription factor FET5
Length = 276
Score = 365 bits (938), Expect = e-101
Identities = 170/258 (65%), Positives = 215/258 (82%), Gaps = 3/258 (1%)
Query: 46 KSTFCNAIISHMQSIGRRAHIVNLDPAAEATKYEFTIDIRDLISLEDVMEEFGLGPNGSL 105
KSTFC A++S+M+S+GR H+VNLDPAAE ++E T+DIRDLIS++DVMEE GPNG L
Sbjct: 16 KSTFCGALMSYMKSVGRSCHLVNLDPAAENFEWEPTVDIRDLISIDDVMEELDYGPNGGL 75
Query: 106 IYCFEYLLNNLDWLDEEIGDYNDEYLIFDCPGQIELYTHIPVLPTIVRHLQNQLNFNLCA 165
IYCFE+L+ NLDWL+EEIGDY+++YLIFD PGQIELYTH+P+LP ++RHLQ LNF CA
Sbjct: 76 IYCFEFLMENLDWLNEEIGDYDEDYLIFDMPGQIELYTHVPILPALIRHLQVTLNFRPCA 135
Query: 166 TYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINILSKLDLVKDSHN--KKALKKFLNP 223
YLLE+ F++D +KFF+G LSAMSAM+++E+PHIN+LSK+DL+KD++N K LK+FLN
Sbjct: 136 VYLLESQFLVDRTKFFAGVLSAMSAMVMMEVPHINLLSKMDLLKDNNNITKAELKRFLNT 195
Query: 224 DPLLLTDKVNEETNPKFHKLNEAIANLVDDFGMVQFLPLEAKNPESVSTILSYIDDVTQW 283
DPLLLT ++NE TNPKFH+LN I L+DDF MV FLPLE+ N ESVS +LSYIDD TQW
Sbjct: 196 DPLLLTGEINETTNPKFHELNRCIVQLIDDFNMVNFLPLESGNEESVSRVLSYIDDATQW 255
Query: 284 AEAQEPKEPNDQIEIDDM 301
E QEPK+P D+ E DD+
Sbjct: 256 YEDQEPKDP-DRFEADDL 272
>HsM9994189 [K] KOG1534 Putative transcription factor FET5
Length = 284
Score = 239 bits (611), Expect = 3e-63
Identities = 114/253 (45%), Positives = 174/253 (68%), Gaps = 5/253 (1%)
Query: 46 KSTFCNAIISHMQSIGRRAHIVNLDPAAEATKYEFTIDIRDLISLEDVMEEFGL--GPNG 103
+ST+C ++ H +++ R +VNLDPAAE Y DIR+LI ++DVME+ L GPNG
Sbjct: 16 RSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDVMEDDSLRFGPNG 75
Query: 104 SLIYCFEYLLNNLDWLDEEIGDYNDEYLIFDCPGQIELYTHIPVLPTIVRHLQNQLNFNL 163
L++C EY NN DWL+ +G D+Y++FDCPGQIELYTH+PV+ +V+ L+ Q F +
Sbjct: 76 GLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQLVQQLE-QWEFRV 134
Query: 164 CATYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINILSKLDLVKDSHNKKALKKFLNP 223
C +L+++ F++++ KF SG L+A+SAMI LE+P +NI++K+DL+ KK ++KFL+P
Sbjct: 135 CGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLL-SKKAKKEIEKFLDP 193
Query: 224 DPL-LLTDKVNEETNPKFHKLNEAIANLVDDFGMVQFLPLEAKNPESVSTILSYIDDVTQ 282
D LL D ++ + KF KL +AI L+DD+ MV+FLP + + ES++ +L +ID Q
Sbjct: 194 DMYSLLEDSTSDLRSKKFKKLTKAICGLIDDYSMVRFLPYDQSDEESMNIVLQHIDFAIQ 253
Query: 283 WAEAQEPKEPNDQ 295
+ E E KEP ++
Sbjct: 254 YGEDLEFKEPKER 266
>Hs21361523 [K] KOG1534 Putative transcription factor FET5
Length = 284
Score = 239 bits (610), Expect = 4e-63
Identities = 115/253 (45%), Positives = 173/253 (67%), Gaps = 5/253 (1%)
Query: 46 KSTFCNAIISHMQSIGRRAHIVNLDPAAEATKYEFTIDIRDLISLEDVMEEFGL--GPNG 103
KST+C ++ H +++ R +VNLDPAAE Y DIR+LI ++DVME+ L GPNG
Sbjct: 16 KSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDVMEDDSLRFGPNG 75
Query: 104 SLIYCFEYLLNNLDWLDEEIGDYNDEYLIFDCPGQIELYTHIPVLPTIVRHLQNQLNFNL 163
L++C EY NN DWL+ +G D+Y++FDCPGQIELYTH+PV+ +V+ L+ Q F +
Sbjct: 76 GLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQLVQQLE-QWEFRV 134
Query: 164 CATYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINILSKLDLVKDSHNKKALKKFLNP 223
C +L+++ F++++ KF SG L+A+SAMI LE+P +NI++K+DL+ KK ++KFL+P
Sbjct: 135 CGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLL-SKKAKKEIEKFLDP 193
Query: 224 DPL-LLTDKVNEETNPKFHKLNEAIANLVDDFGMVQFLPLEAKNPESVSTILSYIDDVTQ 282
D LL D ++ + KF KL +AI L+DD+ MV+FLP + + ES++ L +ID Q
Sbjct: 194 DMYSLLEDSTSDLRSKKFKKLTKAICGLIDDYSMVRFLPYDQSDEESMNIALQHIDFAIQ 253
Query: 283 WAEAQEPKEPNDQ 295
+ E E KEP ++
Sbjct: 254 YGEDLEFKEPKER 266
>CE23026 [K] KOG1534 Putative transcription factor FET5
Length = 272
Score = 226 bits (575), Expect = 4e-59
Identities = 109/248 (43%), Positives = 166/248 (65%), Gaps = 4/248 (1%)
Query: 46 KSTFCNAIISHMQSIGRRAHIVNLDPAAEATKYEFTIDIRDLISLEDVME--EFGLGPNG 103
KST+C+ + +H S GR +VNLDPA E Y +D+RDLIS+ DV E E LGPNG
Sbjct: 15 KSTYCSVMYNHCLSTGRTLRMVNLDPACEVFNYPAVVDVRDLISVNDVQEDEELILGPNG 74
Query: 104 SLIYCFEYLLNNLDWLDEEIGDYNDEYLIFDCPGQIELYTHIPVLPTIVRHLQNQLNFNL 163
+L++C EYL+ NL+WL +E+ + D+Y + DCPGQIELY+H+PV+ IV L++ +FN+
Sbjct: 75 ALVFCMEYLVQNLEWLHDELDEGEDDYFVIDCPGQIELYSHLPVMRQIVDALKS-WDFNV 133
Query: 164 CATYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINILSKLDLVKDSHNKKALKKFLNP 223
C+ +L++ FV+D KF SGAL+A+SAM+ +E P IN+L+K+DL+ + NK+ + +FL
Sbjct: 134 CSVFLIDTNFVLDAEKFISGALTALSAMVAIETPAINVLTKMDLLSE-RNKQLVDEFLET 192
Query: 224 DPLLLTDKVNEETNPKFHKLNEAIANLVDDFGMVQFLPLEAKNPESVSTILSYIDDVTQW 283
D + D+ N K KL IA +++D+ +V+F+PL ++ ES+ +L ID Q+
Sbjct: 193 DTRSIVDQDETVWNSKHRKLTRTIAQVLEDYSIVKFVPLNCEDEESIDQLLLTIDTTIQY 252
Query: 284 AEAQEPKE 291
E E K+
Sbjct: 253 GEDLEVKD 260
>At4g12790 [K] KOG1534 Putative transcription factor FET5
Length = 282
Score = 220 bits (561), Expect = 2e-57
Identities = 121/284 (42%), Positives = 168/284 (58%), Gaps = 49/284 (17%)
Query: 46 KSTFCNAIISHMQSIGRRAHIVNLDPAAEATKYEFTIDIRDLISLEDVMEEFGLGPNGSL 105
KST+C+++ H ++IGR H+VNLDPAAE Y +DIR+LISLEDVME+ LGPNG+L
Sbjct: 15 KSTYCSSLYEHCETIGRTMHVVNLDPAAEIFNYPVAMDIRELISLEDVMEDLKLGPNGAL 74
Query: 106 IYCFEYLLNNL----------------------------DWLDEEIGDY-NDEYLIFDCP 136
+YC EY L L DW+DEE+ +Y +D+YLIFDCP
Sbjct: 75 MYCMEYPLFWLHWQLENVTSFVKSGLEKLLTLYLEDSLHDWVDEELENYRDDDYLIFDCP 134
Query: 137 GQIELYTHIPVLPTIVRHLQNQLNFNLCATYLLEAPFVIDTSKFFSGALSAMSAMILLEL 196
GQIEL+TH+PVL V HL+ Q NFN+C YLL++ F+ D +KF SG +S+++AMI LEL
Sbjct: 135 GQIELFTHVPVLKNFVEHLK-QKNFNVCVVYLLDSQFITDVTKFISGCMSSLAAMIQLEL 193
Query: 197 PHINILSKLDLVKDSHNKKALKKFLNPDPLLLTDKVNEETNPKFHKLNEAIANLVDDFGM 256
PH+NILSK+DL++D N +E F L ++A V ++GM
Sbjct: 194 PHVNILSKMDLLQDKSN-------------------IDEYGFLFFPLFFSVAVSVGEYGM 234
Query: 257 VQFLPLEAKNPESVSTILSYIDDVTQWAEAQEPKEPNDQIEIDD 300
V F+P+ + +S+ +LS ID Q+ E + +D DD
Sbjct: 235 VNFIPINLRKEKSIQYVLSQIDVCIQFGEDADVNIKDDDDFSDD 278
>Hs8922366 [R] KOG1533 Predicted GTPase
Length = 310
Score = 175 bits (443), Expect = 8e-44
Identities = 91/250 (36%), Positives = 147/250 (58%), Gaps = 7/250 (2%)
Query: 46 KSTFCNAIISHMQSIGRRAHIVNLDPAAEATKYEFTIDIRDLISLEDVMEEFGLGPNGSL 105
K+T+C + ++++GRR +VNLDPA E YE +D+ +L+ L DVM+ LGPNG L
Sbjct: 22 KTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGDVMDALRLGPNGGL 81
Query: 106 IYCFEYLLNNLDWLDEEIGDYNDEYLIFDCPGQIELYTHIPVLPTIVRHLQNQLNFNLCA 165
+YC EYL NLDWL ++ Y +FDCPGQ+EL TH L +I + Q + L A
Sbjct: 82 LYCMEYLEANLDWLRAKLDPLRGHYFLFDCPGQVELCTHHGALRSIFSQMA-QWDLRLTA 140
Query: 166 TYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINILSKLDLVKDSHNKKALKKFLNPDP 225
+L+++ + D +KF S ++++ M+ +ELPHIN+LSK+DL+ + + K A +
Sbjct: 141 VHLVDSHYCTDPAKFISVLCTSLATMLHVELPHINLLSKMDLI-EHYGKLAFNLDYYTEV 199
Query: 226 L----LLTDKVNEETNPKFHKLNEAIANLVDDFGMVQFLPLEAKNPESVSTILSYIDDVT 281
L LL ++ + +LNE + L++D+ +V F+PL ++ ES+ +L +D
Sbjct: 200 LDLSYLLDHLASDPFFRHYRQLNEKLVQLIEDYSLVSFIPLNIQDKESIQRVLQAVDKAN 259
Query: 282 QWA-EAQEPK 290
+ AQE +
Sbjct: 260 GYCFRAQEQR 269
>7298847 [K] KOG1534 Putative transcription factor FET5
Length = 235
Score = 169 bits (428), Expect = 4e-42
Identities = 91/222 (40%), Positives = 137/222 (60%), Gaps = 15/222 (6%)
Query: 46 KSTFCNAIISHMQSIGRRAHIVNLDPAAEATKYEFTIDIRDLISLEDVME--EFGLGPNG 103
KST+C+ + + R +VNLDPAAE Y DIRDLI L+D ME E GPNG
Sbjct: 15 KSTYCSLMQQYAMDCKRNVQVVNLDPAAEHFTYNPLTDIRDLIHLDDAMEDEELHYGPNG 74
Query: 104 SLIYCFEYLLNNLDWLDEE---------IGDYNDEYLIFDCPGQIELYTHIPVLPTIVRH 154
LI+C E+L+ N +WL E+ +G+ +D+Y++FD PGQIEL+TH+ + +V
Sbjct: 75 GLIFCLEFLIENQEWLKEQLCGGENELMVGEPDDDYILFDMPGQIELFTHLKMGRQLVEL 134
Query: 155 LQNQLNFNLCATYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINILSKLDLVKDSHNK 214
L++ NF C + L++ F++D +KF SG ++A+S M +E PHIN+L+K+DL+ S +
Sbjct: 135 LESW-NFRTCVVFCLDSQFMVDGAKFISGTMAALSVMANMEQPHINVLTKVDLL-SSDAR 192
Query: 215 KALKKFLNPDPLLLTDKVNEET--NPKFHKLNEAIANLVDDF 254
K L+ +L PD L ++ T K+ KL +AI L++DF
Sbjct: 193 KQLEMYLEPDAHSLMGELTIGTGFGEKYAKLTQAIGALIEDF 234
>At5g22370 [R] KOG1533 Predicted GTPase
Length = 291
Score = 167 bits (423), Expect = 2e-41
Identities = 87/238 (36%), Positives = 137/238 (57%), Gaps = 6/238 (2%)
Query: 46 KSTFCNAIISHMQSIGRRAHIVNLDPAAEATKYEFTIDIRDLISLEDVMEEFGLGPNGSL 105
K+T+CN + + +GR+ IVNLDPA +A YE ++I +LI LEDVM E LGPNG L
Sbjct: 15 KTTYCNGMSQFLSLMGRKVAIVNLDPANDALPYECGVNIEELIKLEDVMSEHSLGPNGGL 74
Query: 106 IYCFEYLLNNLDWLDEEIGD-YNDEYLIFDCPGQIELYTHIPVLPTIVRHLQNQLNFNLC 164
+YC EYL N+DWL+ ++ D Y++FD PGQ+EL+ ++ L LN L
Sbjct: 75 VYCMEYLEKNIDWLESKLKPLLKDHYILFDFPGQVELFFIHDSTKNVLTKLIKSLNLRLT 134
Query: 165 ATYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINILSKLDLVKDSHNKKALKKFLNPD 224
A L+++ D + S L ++S M+ +ELPH+N+LSK+DL+ S+ K A D
Sbjct: 135 AVQLIDSHLCCDPGNYVSSLLLSLSTMLHMELPHVNVLSKIDLI-GSYGKLAFNLDFYTD 193
Query: 225 ----PLLLTDKVNEETNPKFHKLNEAIANLVDDFGMVQFLPLEAKNPESVSTILSYID 278
L + + K+ KL + + ++++D+ +V F L+ ++ ESV ++ ID
Sbjct: 194 VQDLSYLEHHLSQDPRSAKYRKLTKELCSVIEDYSLVNFTTLDIQDKESVGDLVKLID 251
>CE07684 [R] KOG1533 Predicted GTPase
Length = 300
Score = 163 bits (413), Expect = 2e-40
Identities = 92/235 (39%), Positives = 136/235 (57%), Gaps = 4/235 (1%)
Query: 46 KSTFCNAIISHMQSIGRRAHIVNLDPAAEATKYEFTIDIRDLISLEDVMEEFGLGPNGSL 105
KSTFC + R +NLDPA + Y ++I ++I++ DVM+ GLGPNG+L
Sbjct: 46 KSTFCAGLTDIFSQTKRPFLTINLDPANDTMAYAPDVNITEMITVNDVMDRLGLGPNGAL 105
Query: 106 IYCFEYLLNNLDWLDEEIGDYNDEYLIFDCPGQIELYTHIPVLPTIVRHLQNQLNFNLCA 165
YC E L N +WL ++I + +YLI DCPGQ+ELY L ++R L+ LCA
Sbjct: 106 KYCIETLGANCNWLLQKIEANHKKYLIIDCPGQLELYKSEGELWKVIRFLEKS-GVRLCA 164
Query: 166 TYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINILSKLDLVKDSHNKKALKKFLN-PD 224
+L ++ + D SKF S ALS ++ M+ +E+P +N LSK DL + L+ F + PD
Sbjct: 165 LHLADSLYCSDPSKFISVALSTLATMVTMEMPQVNCLSKADLFSED-GTYDLEFFSHLPD 223
Query: 225 PLLLTDKVNEETN-PKFHKLNEAIANLVDDFGMVQFLPLEAKNPESVSTILSYID 278
L D +NE K+ KLNEAI ++ DF +V F+PL +N ES+ ++ +D
Sbjct: 224 VNRLLDLLNEVPGLEKYRKLNEAICGVISDFDLVSFVPLAVENKESMMKVIQMVD 278
>ECU07g0540 [K] KOG1534 Putative transcription factor FET5
Length = 252
Score = 162 bits (410), Expect = 5e-40
Identities = 88/246 (35%), Positives = 145/246 (58%), Gaps = 14/246 (5%)
Query: 46 KSTFCNAIISHMQSIGRRAHIVNLDPAAEATKYEFTIDIRDLISLEDVMEEFGLGPNGSL 105
KSTFC I H +++GR ++NLDPA + +++ID+RD I++ DVME++ GPNG L
Sbjct: 15 KSTFCRNIREHGENMGRSYKVINLDPAQISAADDYSIDLRDFITINDVMEDYDYGPNGGL 74
Query: 106 IYCFEYLLNNLDWLDEEIGDYNDEYLIFDCPGQIELYTHIPVLPTIVRHLQNQLNFNLCA 165
+ E L N++ L E D +L+FDCPGQIEL+ H V+P I+ H+ F
Sbjct: 75 LLALEELYENIEELGLE--DLEGSFLVFDCPGQIELFMHSDVMPKIIEHVGRY--FKCGV 130
Query: 166 TYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINILSKLDLVKDSHNKKALKKFLNPDP 225
Y++E+ +++D +K+ SG A+ +M L++P IN++SK+DL+K+ + L+ F P
Sbjct: 131 VYVMESQYLVDINKYVSGCFCALISMARLDVPCINVISKMDLIKN----EDLEVFYTP-- 184
Query: 226 LLLTDKVNEETNP-KFHKLNEAIANLVDDFGMVQFLPLEAKNPESVSTILSYIDDVTQWA 284
T++++ K+ ++ + + + V + M+ F PL+ ESV IL ID Q+
Sbjct: 185 ---TEELSMLIGAGKYSRICKRMLSFVAENNMLDFHPLDWSKEESVKGILHCIDSAVQYY 241
Query: 285 EAQEPK 290
E EP+
Sbjct: 242 EGSEPR 247
>YOR262w [R] KOG1533 Predicted GTPase
Length = 347
Score = 161 bits (408), Expect = 9e-40
Identities = 92/266 (34%), Positives = 143/266 (53%), Gaps = 28/266 (10%)
Query: 46 KSTFCNAIISHMQSIGRRAHIVNLDPAAEATKYEFTIDIRDLISLEDVMEEFGLGPNGSL 105
KST+CN +IGR + +VN+DPA +A Y +DIRD I+LE++M+E LGPNG L
Sbjct: 15 KSTYCNGCSQFFNAIGRHSQVVNMDPANDALPYPCAVDIRDFITLEEIMQEQQLGPNGGL 74
Query: 106 IYCFEYLLNNLDWLDEEIGDYNDE---YLIFDCPGQIELYTHIPVLPTIVRHLQNQLNFN 162
+Y E L N++D +I +E YL+FDCPGQ+EL+TH L I + ++ +L+
Sbjct: 75 MYAVESLDNSIDLFILQIKSLVEEEKAYLVFDCPGQVELFTHHSSLFNIFKKMEKELDIR 134
Query: 163 LCATYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINILSKLDLVK---------DSHN 213
C L++ ++ S++ S L A+ +M++++LPHIN+ SK+D++K D +
Sbjct: 135 FCVVNLIDCFYMTSPSQYISILLLALRSMLMMDLPHINVFSKIDMLKSYGELPFRLDYYT 194
Query: 214 KKALKKFLNPDPLLLTDKVNEETNPKFHKLNEAIANLVDDFGMVQFLPLEAKNPESVSTI 273
+ +L P + + + K+ KL E I LV DF +V F L + ES+ +
Sbjct: 195 EVQDLDYLEP---YIEKEGSSVLGKKYSKLTETIKELVSDFNLVSFEVLSVDDKESMINL 251
Query: 274 LSYIDDV-------------TQWAEA 286
ID T WAEA
Sbjct: 252 QGVIDKANGYIFGASEVGGDTVWAEA 277
>7294480 [R] KOG1533 Predicted GTPase
Length = 306
Score = 158 bits (399), Expect = 1e-38
Identities = 87/242 (35%), Positives = 143/242 (58%), Gaps = 12/242 (4%)
Query: 46 KSTFCNAIISHMQSIGRRAHIVNLDPAAEATKYEFTIDIRDLISLEDVMEEFGLGPNGSL 105
K+T+C + + +GR+ +VNLDPA E YE + + +LI++ED ME LGPNG+L
Sbjct: 27 KTTYCGEALKFYRELGRQVGVVNLDPANENMSYEPVLSVMELITVEDCMEHLKLGPNGAL 86
Query: 106 IYCFEYLLNNL-DWLDEEI----GDYNDEYLIFDCPGQIELYTHIPVLPTIVRHLQNQLN 160
++C EYL ++L DWL + YN Y +FDCPGQ+ELYTH + I L+ +
Sbjct: 87 MHCAEYLADHLEDWLLPALRKLSATYN--YFLFDCPGQVELYTHHNAMARIFERLERE-R 143
Query: 161 FNLCATYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINILSKLDLVKDSHNKKALKKF 220
++L L+++ + + +KF + L A++ M+ + LPH+N+LSK DL+K K
Sbjct: 144 YSLVTVNLIDSHYCSEPAKFIATLLMALNTMLRMSLPHVNVLSKADLLKKHETKLHFNVD 203
Query: 221 LNPDPL---LLTDKVNEE-TNPKFHKLNEAIANLVDDFGMVQFLPLEAKNPESVSTILSY 276
D L L DK++++ K+ KLN AI ++V+D+ +V F L+ + +S+ + ++
Sbjct: 204 YYTDVLDLKYLLDKLDDDPAMRKYRKLNAAICSMVEDYALVSFQLLDVFSTDSMLRLRNH 263
Query: 277 ID 278
ID
Sbjct: 264 ID 265
>SPAC144.07c [R] KOG1533 Predicted GTPase
Length = 315
Score = 155 bits (391), Expect = 9e-38
Identities = 87/246 (35%), Positives = 140/246 (56%), Gaps = 11/246 (4%)
Query: 46 KSTFCNAIISHMQSIGRRAHIVNLDPAAEATKYEFTIDIRDLISLEDVMEEFGLGPNGSL 105
KST+C + + +IGR + IVNLDPA + KY IDIR ++ +E + +++ LGPNG+L
Sbjct: 15 KSTYCFGMYQLLSAIGRSSIIVNLDPANDFIKYPCAIDIRKVLDVEMIQKDYDLGPNGAL 74
Query: 106 IYCFEYLLNNLDWLDEEIGDYNDEYLIFDCPGQIELYTHIPVLPTIVRHLQNQLNFNLCA 165
IY E + +++WL +E+ + D Y+IFDCPGQ+EL+T+ L I++ L+ +L++ +
Sbjct: 75 IYAMEAIEYHVEWLLKELKKHRDSYVIFDCPGQVELFTNHNSLQKIIKTLEKELDYRPVS 134
Query: 166 TYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINILSKLDLVKDSHNKKALKKFLNP-- 223
L++A + S + S L + M+ L++PH+NILSK DL+ F
Sbjct: 135 VQLVDAYCCTNPSAYVSALLVCLKGMLQLDMPHVNILSKADLLCTYGTLPMKLDFFTEVQ 194
Query: 224 -----DPLLLTDKVNEETNPKFHKLNEAIANLVDDFGMVQFLPLEAKNPESVSTILSYID 278
PLL DK + ++ LN+AI LV+DF +V F + +N S+ +L ID
Sbjct: 195 DLSYLAPLLDRDKRLQ----RYSDLNKAICELVEDFNLVSFEVVAVENKASMLRVLRKID 250
Query: 279 DVTQWA 284
+A
Sbjct: 251 QAGGYA 256
>CE01182 [L] KOG1532 GTPase XAB1 interacts with DNA repair protein XPA
Length = 355
Score = 90.1 bits (222), Expect = 3e-18
Identities = 54/211 (25%), Positives = 106/211 (49%), Gaps = 9/211 (4%)
Query: 46 KSTFCNAIISHMQSIGRRAHIVNLDPAAEATKYEFTIDIRDLISLEDVMEEFGLGPNGSL 105
K+TF + + + + +++NLDPA Y +DIRD + ++VM+EFG+GPNG++
Sbjct: 43 KTTFVQRLTAFLHARKTPPYVINLDPAVSKVPYPVNVDIRDTVKYKEVMKEFGMGPNGAI 102
Query: 106 IYCFEYLLNNLDWLDEEIGDYNDEY--LIFDCPGQIELYTHIPVLPTIVRHLQNQLNFNL 163
+ C + D + E I + ++ + D PGQIE +T I L + +
Sbjct: 103 MTCLNLMCTRFDKVIELINKRSSDFSVCLLDTPGQIEAFTWSASGSIITDSLAS--SHPT 160
Query: 164 CATYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINILSKLDLVKDSHNKKALKKFLNP 223
Y++++ + + F S L A S + +LP I + +K D+VK + K ++ F
Sbjct: 161 VVMYIVDSARATNPTTFMSNMLYACSILYRTKLPFIVVFNKADIVKPTFALKWMQDFERF 220
Query: 224 DPLLLTDKVNEETNPKFHKLNEAIANLVDDF 254
D + + + + + L+ +++ ++D+F
Sbjct: 221 D-----EALEDARSSYMNDLSRSLSLVLDEF 246
>Hs14149629 [L] KOG1532 GTPase XAB1 interacts with DNA repair protein XPA
Length = 374
Score = 89.4 bits (220), Expect = 6e-18
Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 10/211 (4%)
Query: 46 KSTFCNAIISHMQSIGRRAHIVNLDPAAEATKYEFTIDIRDLISLEDVMEEFGLGPNGSL 105
K+TF + H+ + G +++NLDPA + IDIRD + ++VM+++GLGPNG +
Sbjct: 32 KTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGLGPNGGI 91
Query: 106 IYCFEYLLNNLDWLDE--EIGDYNDEYLIFDCPGQIELYTHIPVLPTIVRHLQNQLNFNL 163
+ D + + E +Y++ D PGQIE++T I L + +F
Sbjct: 92 VTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTIITEALAS--SFPT 149
Query: 164 CATYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINILSKLDLVKDSHNKKALKKFLNP 223
Y+++ + F S L A S + +LP I +++K D++ S + ++ F
Sbjct: 150 VVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTDIIDHSFAVEWMQDF--- 206
Query: 224 DPLLLTDKVNEETNPKFHKLNEAIANLVDDF 254
D +N+ET L +++ ++D+F
Sbjct: 207 --EAFQDALNQETT-YVSNLTRSMSLVLDEF 234
>SPBC119.15 [L] KOG1532 GTPase XAB1 interacts with DNA repair protein XPA
Length = 367
Score = 86.3 bits (212), Expect = 5e-17
Identities = 53/177 (29%), Positives = 90/177 (49%), Gaps = 4/177 (2%)
Query: 46 KSTFCNAIISHMQSIGRRAHIVNLDPAAEATKYEFTIDIRDLISLEDVMEEFGLGPNGSL 105
K+TF + +H+ S + +I+NLDPA YE IDIRD I+ ++VM+++ LGPNG +
Sbjct: 21 KTTFMQQLNAHLHSKNKPPYILNLDPAVRNLPYEANIDIRDTINYKEVMKQYNLGPNGGI 80
Query: 106 IYCFEYLLNNLDWLDE--EIGDYNDEYLIFDCPGQIELYTHIPVLPTIVRHLQNQLNFNL 163
+ + D + + E ++++ D PGQIE++ I L + ++
Sbjct: 81 MTSLNLFVTKFDQVLKILEKRAPTVDHILIDTPGQIEIFQWSASGSIICDTLAS--SWPT 138
Query: 164 CATYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINILSKLDLVKDSHNKKALKKF 220
C Y+++ P TS + S L A S + +LP I + +K D+ KK + F
Sbjct: 139 CIAYVVDTPRATSTSTWMSSMLYACSMLYKAKLPLIIVYNKCDVQDSEFAKKWMTDF 195
>YJR072c [L] KOG1532 GTPase XAB1 interacts with DNA repair protein XPA
Length = 385
Score = 80.1 bits (196), Expect = 4e-15
Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 4/177 (2%)
Query: 46 KSTFCNAIISHMQSIGRRAHIVNLDPAAEATKYEFTIDIRDLISLEDVMEEFGLGPNGSL 105
K+TF + SH+++ +++NLDPA Y IDIRD I + VME + LGPNG++
Sbjct: 16 KTTFMQRLNSHLRAEKTPPYVINLDPAVLRVPYGANIDIRDSIKYKKVMENYQLGPNGAI 75
Query: 106 IYCFEYLLNNLDWLDEEIGDYNDEY--LIFDCPGQIELYTHIPVLPTIVRHLQNQLNFNL 163
+ +D + + D++ I D PGQIE + I + +F
Sbjct: 76 VTSLNLFSTKIDQVIRLVEQKKDKFQNCIIDTPGQIECFVWSASGAIITESFAS--SFPT 133
Query: 164 CATYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINILSKLDLVKDSHNKKALKKF 220
Y+++ P + F S L A S + +LP I + +K D+ K K+ + F
Sbjct: 134 VIAYIVDTPRNSSPTTFMSNMLYACSILYKTKLPMIVVFNKTDVCKADFAKEWMTDF 190
>At4g21800 [L] KOG1532 GTPase XAB1 interacts with DNA repair protein XPA
Length = 379
Score = 75.9 bits (185), Expect = 7e-14
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 4/164 (2%)
Query: 46 KSTFCNAIISHMQSIGRRAHIVNLDPAAEATKYEFTIDIRDLISLEDVMEEFGLGPNGSL 105
K++F + ++ H ++VNLDPA + + IDIRD + ++VM+++ LGPNG +
Sbjct: 54 KTSFLHRLVCHTFDSKSHGYVVNLDPAVMSLPFGANIDIRDTVKYKEVMKQYNLGPNGGI 113
Query: 106 IYCFEYLLNNLDWLDEEIGDYND--EYLIFDCPGQIELYTHIPVLPTIVRHLQNQLNFNL 163
+ D + I D +Y++ D PGQIE++T I + F
Sbjct: 114 LTSLNLFATKFDEVVSVIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFAS--TFPT 171
Query: 164 CATYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINILSKLDL 207
TY+++ P F S L A S + LP + +K D+
Sbjct: 172 VVTYVVDTPRSSSPITFMSNMLYACSILYKTRLPLVLAFNKTDV 215
>7290105 [L] KOG1532 GTPase XAB1 interacts with DNA repair protein XPA
Length = 382
Score = 74.7 bits (182), Expect = 2e-13
Identities = 47/165 (28%), Positives = 76/165 (45%), Gaps = 6/165 (3%)
Query: 46 KSTFCNAIISHMQSIGRRAHIVNLDPAAEATKYEFTIDIRDLISLEDVMEEFGLGPNGSL 105
K+TF +I H Q ++VNLDPA Y +DIRD ++ +VM+++ LGPNG +
Sbjct: 36 KTTFTQKLIQHAQE-KFNPYVVNLDPACREVPYAAHVDIRDTVNYREVMKQYQLGPNGGI 94
Query: 106 IYCFEYLLNNLDWLDEEI---GDYNDEYLIFDCPGQIELYTHIPVLPTIVRHLQNQLNFN 162
+ + E + G+ ++ + D PGQIE++ I L F
Sbjct: 95 VTALNMFTTKMAQFAELVRRAGERGHKWCVIDTPGQIEVFNWSASGSIITEGLATM--FP 152
Query: 163 LCATYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINILSKLDL 207
Y+++ + F S L A S + LP + L+K+DL
Sbjct: 153 TIVVYVMDVERSACPTTFMSNMLYACSILYKTRLPFLVALNKIDL 197
>ECU06g1300 [R] KOG1533 Predicted GTPase
Length = 266
Score = 73.2 bits (178), Expect = 4e-13
Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 18/236 (7%)
Query: 46 KSTFC---NAIISHMQSIGRRAHIVNLDPAAEATKYEFTIDIRDLISLEDVMEEFGLGPN 102
KST+ A++SH R + VNLDP +F I + S E+ G+GPN
Sbjct: 15 KSTYVMSKKAVLSH-----RNPYTVNLDPG-NCNDGQFDYSICSISSSLKYQEKHGVGPN 68
Query: 103 GSLIYCFEYLLNNLDWLDEEIGDYNDEYLIFDCPGQIELYTHIPVLPTIVRHLQNQLNFN 162
S E +D E + D Y++FD PGQ+E + + I+R+L++ ++
Sbjct: 69 MSAKCVLEEFAAGIDEFFRENIENTDHYVLFDFPGQVEFFMSSDIPNGILRYLRSN-GYS 127
Query: 163 LCATYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINILSKLDLVKDSHNKKALKKFLN 222
+ L + F + S L + + LLE +N++SK D K K +L++ +
Sbjct: 128 VVVVNLTDLVFFSNDHSLLSSYLVSTLCLCLLESAQVNVISKCDNWKKLEMKHSLEEIAS 187
Query: 223 PDPLLLTDKVNEETNPKFHKLNEAIANLVDDFGMVQFLPLEAKNPESVSTILSYID 278
+ L E K KL+E + + G++ + L+ N +SV + ID
Sbjct: 188 LECL--------EDVQKKGKLHEEMVLFIQSQGLLSYEVLDYDNTDSVLNLQITID 235
>ECU02g1430 [L] KOG1532 GTPase XAB1 interacts with DNA repair protein XPA
Length = 270
Score = 69.3 bits (168), Expect = 6e-12
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 17/173 (9%)
Query: 46 KSTFCNAIISHMQ--------SIGRRAHI--VNLDPAAEATKYEFTIDIRDLISLEDVME 95
K+TFC + S + + G A I +NLDPA K +DIRD++ + ME
Sbjct: 29 KTTFCQRLYSWISQDECRIDAATGLNASIYSINLDPAVVNAKMPLNLDIRDVVDYHETME 88
Query: 96 EFGLGPNGSLIYCFE-YLLNNLDWLDEEIGDYNDEYLIFDCPGQIELYTHIPVLPTIVRH 154
++ LGPNG + C +LLN ++D + +EY+I D PGQIE +T ++
Sbjct: 89 KYELGPNGGITTCLNLFLLNIGTYIDRIV----EEYVIVDTPGQIEAFTWSSPGYVLIET 144
Query: 155 LQNQLNFNLCATYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINILSKLDL 207
L+ ++ Y +++ + F S + A S M E+ + + +K DL
Sbjct: 145 LKT--IGDVILVYTVDSLSSHKHAVFMSNMMYAASLMCRYEVETLCLFNKKDL 195
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.320 0.137 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,703,024
Number of Sequences: 60738
Number of extensions: 730545
Number of successful extensions: 2002
Number of sequences better than 1.0e-05: 22
Number of HSP's better than 0.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1938
Number of HSP's gapped (non-prelim): 22
length of query: 301
length of database: 30,389,216
effective HSP length: 106
effective length of query: 195
effective length of database: 23,950,988
effective search space: 4670442660
effective search space used: 4670442660
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)