ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV4598 good S KOG3134 Function unknown Predicted membrane protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV4598 1567554 1568459 302
(302 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YLR242c [S] KOG3134 Predicted membrane protein 208 7e-54
SPAPB1A10.15 [S] KOG3134 Predicted membrane protein 68 1e-11
At4g01510 [S] KOG3134 Predicted membrane protein 64 3e-10
Hs12232479 [S] KOG3134 Predicted membrane protein 59 9e-09
CE02292 [S] KOG3134 Predicted membrane protein 56 6e-08
At1g01020 [S] KOG3134 Predicted membrane protein 53 5e-07
>YLR242c [S] KOG3134 Predicted membrane protein
Length = 321
Score = 208 bits (530), Expect = 7e-54
Identities = 119/314 (37%), Positives = 168/314 (52%), Gaps = 25/314 (7%)
Query: 1 MICINCGHQVESLYVIYSGDHIRLTDCPKCSQVVDKYVEFDPVXXXXXXXXXKKGAYRHM 60
MICI C V+SLY +YS DHI+LTDCP C + VDKYVE D V K GAYRH+
Sbjct: 1 MICITCMRPVDSLYTVYSNDHIQLTDCPYCQETVDKYVEIDNVLLFIDLLLLKAGAYRHL 60
Query: 61 TFNKLELQLRKHPEWKISR--QKLSTWNQFKVFATNVRNWLKKYDQLSRLQVFLVAFEVY 118
FN LEL L K+P+ K Q L + Q +F NV+NW KYD+L+RL + L++FE+Y
Sbjct: 61 VFNALELHLSKYPKRKALNDCQCLRDYTQALLF--NVKNWFCKYDRLNRLWLLLLSFEIY 118
Query: 119 LNWVTVETKFSKYSSE-------FMFSNKL---------MIYNILEGSVW-----VQYLF 157
L WVT E+K+ Y + M S KL ++ N + V+ +QYL+
Sbjct: 119 LTWVTEESKYIYYLNRNNNDGKLIMLSKKLPESFKWDSAIMRNTITSKVFTWSPPIQYLY 178
Query: 158 FFAYVMIEMIVLHSVFQYVLINRWNWGKVLKYRKDIVYYILLISYGAKIFPILMLIWPYD 217
F +Y ++++ + H+ QY ++ + +W KD++ Y +L+SYGAKIFPILMLIWPYD
Sbjct: 179 FASYCILDVSLFHTFTQYFILKKLHWKHYSVSSKDVISYTILLSYGAKIFPILMLIWPYD 238
Query: 218 TLLSTXXXXXXXXXXXXXXVHIVTQKPYFKXXXXXXXXXXXXXXXXXXXXXXVVSGFDMS 277
TL+S + IVT Y+ V+ F+ S
Sbjct: 239 TLISMSIIKWVANLYIIESLKIVTNLSYWNIIKIFISVSLLRYFMVKPILIVFVAKFNFS 298
Query: 278 VMLSYIMSEYRLIL 291
V+ + I E+ L+L
Sbjct: 299 VIKNLIHQEFILLL 312
>SPAPB1A10.15 [S] KOG3134 Predicted membrane protein
Length = 220
Score = 68.2 bits (165), Expect = 1e-11
Identities = 54/219 (24%), Positives = 82/219 (36%), Gaps = 39/219 (17%)
Query: 1 MICINCGHQVESLYVIYSG--DHIRLTDCPKCSQVVDKYVEFDPVXXXXXXXXXKKGAYR 58
M C+ CG +V+SLY Y +IRL C C Q DKY+E D V K YR
Sbjct: 1 MKCVECGAEVDSLYTYYGRGTSNIRLAQCKNCKQFADKYIELDVVLISMDVILMKPQVYR 60
Query: 59 HMTFNKLELQLRKHPEWKISRQKLSTWNQFKVFATNVRNWLKKYDQLSRLQVFLVAFEVY 118
H+ FN L A RN L K ++ + + F V+
Sbjct: 61 HLLFNSLS-------------------------ARTFRN-LTKCAKVVNFCILISLFNVF 94
Query: 119 LNWVTVETKFSKYSSEFMFSNKLMIYNILEGSVWVQYLFFFAYVMIEMIVLHSVFQYVLI 178
L W ++ K ++ F + + L + QYL ++E V +L
Sbjct: 95 LVW----SRLEKRAALFPYFTPAQAF--LSQPIIRQYLTLLLICLVETTVYQISVVLLLC 148
Query: 179 NRWNWGKVLKYRKDIVYYILLISYGAKIFPILMLIWPYD 217
W ++ +S ++ P+ M+IW YD
Sbjct: 149 LTMGWKSWTSASGAVI-----LSSSTRMLPVFMVIWDYD 182
>At4g01510 [S] KOG3134 Predicted membrane protein
Length = 252
Score = 63.9 bits (154), Expect = 3e-10
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 51/215 (23%)
Query: 3 CINCGHQVESLYVIYSGDHIRLTDCPKCSQVVDKYVEFDPVXXXXXXXXXKKGAYRHMTF 62
C+ CGH+V+SL++ YS + RL C C +V D+YVE + + K AYRH+ +
Sbjct: 32 CVECGHKVKSLFIQYSPGNFRLMKCENCEEVADEYVECELLIIFIDLILHKTKAYRHLLY 91
Query: 63 NKLELQLRKHPEWKISRQKLSTWNQFKVFATNVRNWLKKYDQLSRLQVFLVAFEVYLNWV 122
N + + + NV++ L K L + + + Y + +
Sbjct: 92 NVVNQE-----------------------SANVQHLLWK------LVLAYLLLDTYRSLL 122
Query: 123 TVETK-FSKYSSEFMFSNKLMIYNILEGSVWVQYLFFFAYVMIEMIVLHSVFQYVLINRW 181
T S S F+F + ++ N+L + + F F++ ++L
Sbjct: 123 LRRTNDGSNVSMSFLFESLEVLVNVLSAN----FAFVFSFAFAAKLML------------ 166
Query: 182 NWGKVLKYRKDIVYYILLISYGAKIFPILMLIWPY 216
V+ K+I+ IL+ SY KIF M +W +
Sbjct: 167 ----VMPRGKEILLTILISSY-VKIFLFAMPVWEF 196
>Hs12232479 [S] KOG3134 Predicted membrane protein
Length = 271
Score = 58.9 bits (141), Expect = 9e-09
Identities = 51/215 (23%), Positives = 83/215 (37%), Gaps = 46/215 (21%)
Query: 3 CINCGHQVESLYVIYSGDHIRLTDCPKCSQVVDKYVEFDPVXXXXXXXXXKKGAYRHMTF 62
CI C + + LY Y+ +++T C C + VDKY+E+DPV K AYRH+ F
Sbjct: 34 CIECNQEAKELYRDYNHGVLKITICKSCQKPVDKYIEYDPVIILINAILCKAQAYRHILF 93
Query: 63 NKLELQLRKHPEWKISRQKLSTWNQFKVFATNVRNWLKKYDQLSRLQVFLVAFEVYLNWV 122
N Q+ H +L +F + E YL W
Sbjct: 94 N---TQINIH---------------------------------GKLCIFCLLCEAYLRWW 117
Query: 123 TVETKFSKYSSEFMFSNKLMIYNILEGSVWVQYLFFFAYVMIEMIVLHSVFQYVLINRWN 182
++ S++ + L+ Y W Y F + + +F ++ + R
Sbjct: 118 QLQD-----SNQNTAPDDLIRY----AKEWDFYRMFAIAALEQTAYFIGIFTFLWVERPM 168
Query: 183 WGKVLKYRKDIVYYILLISYGAKIFPILMLIWPYD 217
K ++ +LL SYG K+ I +IW +D
Sbjct: 169 TAKKKPNFILLLKALLLSSYG-KLLLIPAVIWEHD 202
>CE02292 [S] KOG3134 Predicted membrane protein
Length = 236
Score = 56.2 bits (134), Expect = 6e-08
Identities = 26/61 (42%), Positives = 33/61 (53%)
Query: 3 CINCGHQVESLYVIYSGDHIRLTDCPKCSQVVDKYVEFDPVXXXXXXXXXKKGAYRHMTF 62
C+NC +LY YS IRLT+C C +VVDKY+E+D V AYRH+
Sbjct: 22 CVNCQEFTSTLYKKYSEGVIRLTECDNCGEVVDKYIEYDVVLVVIDLMLQYVQAYRHLLL 81
Query: 63 N 63
N
Sbjct: 82 N 82
>At1g01020 [S] KOG3134 Predicted membrane protein
Length = 128
Score = 53.1 bits (126), Expect = 5e-07
Identities = 21/63 (33%), Positives = 36/63 (56%)
Query: 3 CINCGHQVESLYVIYSGDHIRLTDCPKCSQVVDKYVEFDPVXXXXXXXXXKKGAYRHMTF 62
C+ CG +V+SL++ YS +IRL C C +V D+Y+E + + + YRH+ +
Sbjct: 8 CVGCGFRVKSLFIQYSPGNIRLMKCGNCKEVADEYIECERMIIFIDLILHRPKVYRHVLY 67
Query: 63 NKL 65
N +
Sbjct: 68 NAI 70
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.329 0.141 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,611,001
Number of Sequences: 60738
Number of extensions: 513505
Number of successful extensions: 1601
Number of sequences better than 1.0e-05: 6
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1591
Number of HSP's gapped (non-prelim): 7
length of query: 302
length of database: 30,389,216
effective HSP length: 106
effective length of query: 196
effective length of database: 23,950,988
effective search space: 4694393648
effective search space used: 4694393648
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)