ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIV4686.1   suspect: LH  R     KOG0379   General function prediction only                               Kelch repeat-containing proteins

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIV4686.1 1602283  1602531 83   
         (83 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Hs14744278 [R] KOG0379 Kelch repeat-containing proteins                28   2.2  
7294100 [C] KOG3619 Adenylate/guanylate cyclase                        27   6.5  

>Hs14744278 [R] KOG0379 Kelch repeat-containing proteins
          Length = 299

 Score = 28.1 bits (61), Expect = 2.2
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 4   SIVEVSWDGNDSLFDLLTNLSFSNFLHLGQDHG 36
           S++E++W+   + F  L NLS +  LHLG   G
Sbjct: 261 SLLELAWEKLLAAFPNLANLSRTQLLHLGLTQG 293


>7294100 [C] KOG3619 Adenylate/guanylate cyclase
          Length = 1597

 Score = 26.6 bits (57), Expect = 6.5
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 9   SWDGNDSLFDLLTNLSFSNFLHLGQDHGGNFLWRK 43
           SW GN ++   L +    N      DH G  +WR+
Sbjct: 177 SWAGNGAVGGELKSAHNHNIADFEADHNGQLVWRR 211


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.325    0.144    0.477 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,224,289
Number of Sequences: 60738
Number of extensions: 204070
Number of successful extensions: 400
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 398
Number of HSP's gapped (non-prelim): 2
length of query: 83
length of database: 30,389,216
effective HSP length: 59
effective length of query: 24
effective length of database: 26,805,674
effective search space: 643336176
effective search space used: 643336176
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)