ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIV4753   suspect: LH   T     KOG0371  Signal transduction mechanisms                                 Serine/threonine protein phosphatase 2A, catalytic subunit

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIV4753 1624908 1623979 -310 
         (310 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YNL217w [T] KOG0371 Serine/threonine protein phosphatase 2A cata...   179   3e-45

>YNL217w [T] KOG0371 Serine/threonine protein phosphatase 2A catalytic
           subunit
          Length = 326

 Score =  179 bits (455), Expect = 3e-45
 Identities = 119/327 (36%), Positives = 184/327 (55%), Gaps = 29/327 (8%)

Query: 2   KLAQILTASGTFLFMLYVTWVFLKSDDYREFPVIQT-------KRHADIKHSYERLVFVG 54
           + A + TA   F+     T    K D+ R  P +         K+   +    +  VFVG
Sbjct: 8   RAATLSTALILFVACCVYTLYIFKFDNPRLSPPVSLLPTISTLKKIEHVTDLNKEYVFVG 67

Query: 55  DVHGMYHKYEQLMEDKVKP-DSNTTVVFLGDFISKGPNSNRLVEQIILNDDVGYDVKCVL 113
           DVHG Y ++ +L++DK+     N T++ LGDFI KGP+S+++V  I+ + D    VKCVL
Sbjct: 68  DVHGNYDEFIELIDDKIGGLGENITMILLGDFIHKGPDSDKVVSYILNHKD---QVKCVL 124

Query: 114 GNNELRILYALLNP-ISLTKRK---LIKIKFSSE-DFLP-DLPSINKNHRRLARELGWDN 167
           GN+E+ ++ A LNP  S   R+   +  + FS+E +F+P D+  I+  H RLARELG+  
Sbjct: 125 GNHEILVMMAYLNPDFSKWVRRPKLMTPLTFSTETNFIPQDISKISNAHGRLARELGFSK 184

Query: 168 LARLAAKCGAMWELQDPLYDNFTLVAVHAGVLPDHLGNPP----LKEITDMKYVDVNDHS 223
           L++LA  C    EL   +  +  L   HAG++P     P     +  +++MKYVD  + S
Sbjct: 185 LSQLAEHCSMAIELDLDITGDI-LFGAHAGMVPGDFMKPNQIPGVSSLSNMKYVDKKNWS 243

Query: 224 HTTRQKF-ENATRWYHLWNPLDKKKYSIH-NKIKVIYGHDSSKGLNIRPNTKGLDSACYN 281
            T+R+K  +N  RWY LW+     KY  H +  KV YGHD+S GLN+R  TKGLD+AC  
Sbjct: 244 KTSREKENKNYVRWYTLWD-----KYGDHFSNAKVFYGHDASMGLNLRRQTKGLDTACIK 298

Query: 282 GNKLTALEYVWNHKTKEYNHIMHQISC 308
            N L++++  ++ K  +Y++ + Q+ C
Sbjct: 299 NNLLSSMKVKYDIKKGQYDYELIQVQC 325


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.320    0.138    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,153,624
Number of Sequences: 60738
Number of extensions: 887531
Number of successful extensions: 1971
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1965
Number of HSP's gapped (non-prelim): 1
length of query: 310
length of database: 30,389,216
effective HSP length: 106
effective length of query: 204
effective length of database: 23,950,988
effective search space: 4886001552
effective search space used: 4886001552
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)