ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV4840 good I KOG1470 Lipid transport and metabolism Phosphatidylinositol transfer protein PDR16 and related proteins
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV4840 1658882 1659271 130
(130 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YNL231c [I] KOG1470 Phosphatidylinositol transfer protein PDR16 ... 134 3e-32
YNL264c [I] KOG1470 Phosphatidylinositol transfer protein PDR16 ... 90 7e-19
SPCC23B6.04c_2 [I] KOG1470 Phosphatidylinositol transfer protein... 63 1e-10
>YNL231c [I] KOG1470 Phosphatidylinositol transfer protein PDR16 and related
proteins
Length = 351
Score = 134 bits (337), Expect = 3e-32
Identities = 67/130 (51%), Positives = 90/130 (68%), Gaps = 2/130 (1%)
Query: 1 MFRR-KQKVEEKVDTSKWVKIEVPIESPPDAVKHPEPIVLEDEQLKKYNTVFSHFTDTDL 59
MF+R +K E D + I+ PI+ P ++ P+ L EQ K Y+ V HF++ DL
Sbjct: 1 MFKRFSKKKEAPEDPKNLINIDKPIKELPASIAIPKEKPLTGEQQKMYDEVLKHFSNPDL 60
Query: 60 LIPTKEKKNHSDNEMKPLTDLEKAWLSRECFMRYLRATKWNTQDCIDRIVLSLAWRREFG 119
+ T EK N S++++KPL + EKAWL+RECF+RYLRATKW +DCIDRI ++LAWRREFG
Sbjct: 61 KVYTSEK-NKSEDDLKPLEEEEKAWLTRECFLRYLRATKWVLKDCIDRITMTLAWRREFG 119
Query: 120 ISSFGEENGD 129
IS GEE+GD
Sbjct: 120 ISHLGEEHGD 129
>YNL264c [I] KOG1470 Phosphatidylinositol transfer protein PDR16 and related
proteins
Length = 350
Score = 90.1 bits (222), Expect = 7e-19
Identities = 55/136 (40%), Positives = 75/136 (54%), Gaps = 12/136 (8%)
Query: 1 MFRRKQKVEEKVDTSKWVKIEVPIESPPDAVKHPEPIVLE---DEQLKKYNTVFSHFTDT 57
+F RK+ V K + + PP K+ +LE ++Q +KY V HF D
Sbjct: 3 LFSRKRDHTPAVPKEKLIPCDKIFLDPP--AKYGNAPLLEPISEDQNEKYRAVLRHFQDD 60
Query: 58 DLLIPTKEKKNHSDNEM----KPLTDLEKAWLSRECFMRYLRATKWNTQDCIDRIVLSLA 113
DL +P E N DN +PL+D EK WLSRECF+RYLRA KWNT + I + +L
Sbjct: 61 DLKLP--ENLNDLDNGTHANDRPLSDWEKFWLSRECFLRYLRANKWNTANAIKGLTKTLV 118
Query: 114 WRREFGISSFGEENGD 129
WRRE G+ + G+E+ D
Sbjct: 119 WRREIGL-THGKEDKD 133
>SPCC23B6.04c_2 [I] KOG1470 Phosphatidylinositol transfer protein PDR16 and related
proteins
Length = 442
Score = 62.8 bits (151), Expect = 1e-10
Identities = 31/84 (36%), Positives = 46/84 (53%), Gaps = 5/84 (5%)
Query: 39 LEDEQLKKYNTVFSHFTDTDLLIPTKEKKNHSDNEMKPLTDLEKAWLSRECFMRYLRATK 98
L EQ + Y V + + + +D L +LE+ WL+REC +RYLRATK
Sbjct: 26 LTSEQEEMYEEVLKYCLELKEIPVASNSSKKTD-----LIELERLWLTRECILRYLRATK 80
Query: 99 WNTQDCIDRIVLSLAWRREFGISS 122
W+ + RIV +L WRR FG+++
Sbjct: 81 WHVSNAKKRIVDTLVWRRHFGVNN 104
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.134 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,083,895
Number of Sequences: 60738
Number of extensions: 385038
Number of successful extensions: 1100
Number of sequences better than 1.0e-05: 3
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1095
Number of HSP's gapped (non-prelim): 3
length of query: 130
length of database: 30,389,216
effective HSP length: 94
effective length of query: 36
effective length of database: 24,679,844
effective search space: 888474384
effective search space used: 888474384
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)