ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV4907 good U KOG2993 Intracellular trafficking, secretion, and vesicular transport Cytoplasm to vacuole targeting protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV4907 1687935 1683430 -1502
(1502 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YNL242w [U] KOG2993 Cytoplasm to vacuole targeting protein 700 0.0
SPBC31E1.01c [U] KOG2993 Cytoplasm to vacuole targeting protein 108 5e-23
At3g19190 [U] KOG2993 Cytoplasm to vacuole targeting protein 81 1e-14
Hs20558378 [U] KOG2993 Cytoplasm to vacuole targeting protein 75 6e-13
7292279 [U] KOG2993 Cytoplasm to vacuole targeting protein 73 4e-12
Hs21361678 [U] KOG2993 Cytoplasm to vacuole targeting protein 72 9e-12
HsM8922305 [U] KOG2993 Cytoplasm to vacuole targeting protein 71 1e-11
>YNL242w [U] KOG2993 Cytoplasm to vacuole targeting protein
Length = 1592
Score = 700 bits (1806), Expect = 0.0
Identities = 485/1637 (29%), Positives = 826/1637 (49%), Gaps = 182/1637 (11%)
Query: 1 MSSWLPQNVQKRLLLYVLQQVSLFSNVDLTNLDVSLGSQSQFSFNDIDLNVKEIKLPNVD 60
M+ WLPQN+QKRLLLYVLQQ+SLFSN+DL+NLDVS+GS+S FSF+D++L++ ++ +PNV
Sbjct: 1 MAFWLPQNIQKRLLLYVLQQISLFSNIDLSNLDVSIGSKSHFSFHDVNLSLDDLNIPNVQ 60
Query: 61 VLSGKIEKLNLQLAVAGNVDISGEGLTFVLKPIDRFFEDDLSDQWASSLTKSVIDMTKSI 120
+ G +++L L+L V+G V+I G GL F++ P+ +L + L KS+ D+T S+
Sbjct: 61 INEGIVDELVLKLTVSGGVEIDGSGLRFIMTPLYSSGSQELHSDF---LVKSIQDLTNSM 117
Query: 121 M-------------ESDVTDSSEHS-----VEALEEVSKSPTALDSMRNKVLQMALGKLS 162
+ E D++ S S +EA + + L +MRNK L +AL KL
Sbjct: 118 LQFSDPLTTYNRYKEDDISSSDSSSDLNSNIEASKPAANGSYTLQNMRNKALNVALAKLK 177
Query: 163 LKMKRIEFQFLLS----TEVTLKFTIDTITLLTVD-NKRTVDMGGIEVAFSKTQLSPTNS 217
+ +K + +F+++ ++ ++ +++I L+T D N R +++ I ++ + Q P
Sbjct: 178 IALKDVTIRFIVNDRDPSDNIVEVHLESIQLITTDANLRHINIENITISSIQKQAVP--- 234
Query: 218 HQNTDSDVEENENTDSEDAMTASITYSKLEATSIYLSAMESLILES------------SD 265
DS V N D ++ S+ SK+EATS+Y+SAME E +D
Sbjct: 235 ----DSPVHPFNNDD----LSQSVYLSKMEATSLYMSAMEEQSNEDPSEPQVTQEEQEND 286
Query: 266 DAVQVVLTIDKVNIQFQGVTSINDLKVRDVIIRIDEINIYLRKISPIR----KHLLSILR 321
+ ++ I+ +NI F+G++S+NDL++ +++I I ++++ + KI I+ K+++ I+
Sbjct: 287 KCKESLMEINNLNIAFKGLSSVNDLRMSNIVIDIQDVHLAIHKIVEIKNSTLKNIIDIIV 346
Query: 322 ASLDKTSSDGTRTENMRNYKRFQQEQNIKEEEVLTAILLKKVXXXXXXXXXXXXXXXXXK 381
LD S + + + +E L+++ +K + +
Sbjct: 347 THLDANESFSCQDSQSPSPDK-------QEPSALSSVDIKCIYLNLGQDITVILKSFKLE 399
Query: 382 KSEGFTTSASVFDLKLLYMSNEYFFSSPSAQPLFSMQPDQTTAEKKMFLNRDITLNXXXX 441
+ E ++ F L Y ++ S +PL + +QT + + ++ +
Sbjct: 400 QKEN---NSLAFSLGSFYSNSSPLTISHKTKPLLT--GEQTPQSIALNMGDELDIIISHD 454
Query: 442 XXXXXXXXXXXYGSAYNYIQKITRASANQ---KTAEVLHFKSQSINLKILMNNISLELSM 498
++ Q ++ Q T + S+++ L + L +
Sbjct: 455 GIAHFFKIFQFVSKCMSFYQNKSKGMMPQIASDTKRTVQLTSKAVKLSLKFPYFLLCFQV 514
Query: 499 DPIKSTLPHTLFDVEKISLLLIRGDKKVLIGTLSNLIISSKTNGCFHVESFDHKFGAIDI 558
P L+ +E + + + I T+S++ IS+ + + G+ D
Sbjct: 515 SPFIYDSNRELY-IELVDVFKKLPSRCTKILTMSSITISNLQSPL--------QLGSYDD 565
Query: 559 NTRTKAVLESLHLFLSQAELELISSNLIAFCGSISSFTNPNTRNNGHENVTK-------- 610
+ + S+H + + S ++ IS+F T + E K
Sbjct: 566 TLKEALIYSSVHAIIKEVIFNEEYSGIVQLVEDISAFGKLFTDSKNSECTGKSKSKRGSF 625
Query: 611 --KSVRLLHSSNVMNKRATLSNFVLQVHKAKMTITNTLENTFGDITIEAISCILSQDQNK 668
+SVR+L+SS + K++ +NF L++ K+ ++ + FG + + + +
Sbjct: 626 LQRSVRVLNSSRFVYKQSLSANFSLKIDSMKLKVSEIIGPQFGSVEALLSNNFFAITDDS 685
Query: 669 TLCGIVKEARLQRLY--MREKTDIICNV-NHDRSKPQLILNMPNSXXXXXXXXXXXXFID 725
+ K +++R + E +I+ V N ++P L ++ +
Sbjct: 686 QIVYFTKNLKVERKTPSLLEPQEIMSVVLNKAVNEPVLYVHRRANGKLKVIFNNIRIHYY 745
Query: 726 SKWRDLVP------SSSKGDIKQERKLTFRT------MEVRLYDCSLSLKPYRICTGMVI 773
++W +++ ++S D +KL+ + E++ DCSL L P+R+ + MVI
Sbjct: 746 ARWLEILKKNIGPDNASSKDEPVSQKLSKKQPTSGFPWELKCLDCSLILHPFRLKSVMVI 805
Query: 774 SIPKSII---NFSPLGITVSLRSLETLLIDD---MKVLKERNTKVLENISLSTWYQKQGY 827
+ +F P +S ++ LIDD K+ K++N SL +Y QG+
Sbjct: 806 VLDNLTTGGSSFIPQAKLLS-KANTLFLIDDYQNFKIQKDKNWP-----SLINFYAGQGF 859
Query: 828 SPLIKVDVLSLHFSNTD-SMAVSLKVQKVDVSVCSDSLNALMQTALDLKPAETYPDTLKY 886
S + K+D L+ + +D ++ + K+++V +S+C+DS Q +DLK +T+PD K+
Sbjct: 860 SAIGKIDTLNFLINKSDGALLLDCKIEQVGLSLCADSFQTFCQLCIDLKYPQTFPDEEKF 919
Query: 887 QIE-PEAVDIFNELCEDFFVTKENPNDKTEDDYETPPV--------------------SQ 925
+ + +D+F ++ D F + + ++DY++ + SQ
Sbjct: 920 RTQLKNPIDVFKDIDCDLFNSAFIRENNHQNDYDSVHLVDSFLDKTHEFNNGARSKLSSQ 979
Query: 926 GSVNFEEEHFSTERRTVVENDS-----------------KSSVFSILTTIKIHIEEVKLK 968
GS + + ++ ++S K + I +E+V +K
Sbjct: 980 GSYEMDSSSGTATGGILLPHESYLDSAQPKEEDTPPIASKEQERDVDIRGSIDVEKVVIK 1039
Query: 969 LYDGYEWRHTRKEIKSAVDRIQEDFN--------DGLELSETKVFDSIYIPAPKDTVENI 1020
L+DGY+W++TRK I + V+++ ++ + + SE +FDSIYI A K+ V ++
Sbjct: 1040 LFDGYDWKYTRKFIANTVEKLDKELSKAEASSSKSNVPQSEANIFDSIYISANKNNVTDL 1099
Query: 1021 KDNINRKIH---NEETNEGKMKLRPTKKYKVLIKGRDLCIEFKGGQDKIAERASSLSSIN 1077
+ N++ +I N ++ K+ LRP+K YK LI+ + + K + + +S N
Sbjct: 1100 RRNLDGEIQGVQNSFSDVSKVNLRPSKHYKALIQLNKVHVNLKNYR---VDEPDESNSDN 1156
Query: 1078 DYCILNNTFVKVSDLEIIDNLPTSTWNKFLTRSRSNDKMAQEPAMLVIECSLIRPVPHLY 1137
+LN V + + EIIDN+PTSTWNKF+T + P M +++ IRP+ L
Sbjct: 1157 STDVLNRCVVSIYEFEIIDNVPTSTWNKFVTLLKHEPWPHSSP-MFLLDLEFIRPIDFLQ 1215
Query: 1138 ATELICNINIVPLTLHVDQDTLEFLTLFFQFKDNRFELLDEYPDILYIQRLEINSVRLLL 1197
A EL+ +N+ PL LHVDQDTLEFL F FKD RFEL+DEYPDI++IQ+ NS++L L
Sbjct: 1216 AVELVMQLNVAPLRLHVDQDTLEFLIRFLGFKDKRFELIDEYPDIVFIQKFSTNSIKLRL 1275
Query: 1198 DYKPKKVDYAGLKSGKTKEFMNFFILDEARIKLKHVILYGVNGFPQLETILSDIWTPDIT 1257
DYKPKKVDYAGL+SG+T E MNFF LD ++I LK V+LYG+NGF +L L IWTPDIT
Sbjct: 1276 DYKPKKVDYAGLRSGQTSELMNFFTLDGSKIILKSVVLYGLNGFDELNNKLKAIWTPDIT 1335
Query: 1258 KTQIPGILSALTPLKPLAGLSYGARALISVPTEHYQQNGRFGGSLQNGGMVFLKTTGGEV 1317
K Q+PG+L L P++ + G + L++V Y+Q G G SL+ GG VFLKTT G+
Sbjct: 1336 KKQLPGVLEGLAPVRSFMAIGSGVKTLVTVLMSEYRQEGHLGRSLKKGGNVFLKTTTGDF 1395
Query: 1318 IKLAVRLTSGTQTILENTEKLLGGQGITGRNVPITLVEGDEKVD----ALID-ESLLRST 1372
+KL V+LTSGTQ ILENTE+L GG G GR + + D A++D ++L
Sbjct: 1396 VKLGVKLTSGTQAILENTEELFGGVGSNGRVYDASKFGSADGADSDTAAVLDLDTLFEED 1455
Query: 1373 ALFNKEPDNKSNHLDVLL-------ADGNHQKVLSLYADQPKDFNSGLQDAYESMERNLY 1425
L + +H + D N ++SLYADQP D +GL++AY S+E++++
Sbjct: 1456 QLVGSKYSRIRDHEPTAVVIDMSSPGDHNEPTIVSLYADQPLDLPTGLKEAYSSLEKHMH 1515
Query: 1426 LTFDSM--XXXXXXXXXXXXXQEAVSTVAKAAPFVLIRPLIGVTEALSKTLQGLNNQYDE 1483
+ +D++ A VA+AAP +IRPLIG TEA+SKTLQG+ NQ D+
Sbjct: 1516 IAYDAVWRAKGQMKDDKRGGPSAAAVYVARAAPVAIIRPLIGATEAVSKTLQGIANQVDK 1575
Query: 1484 DRIAQIEEKYKSKKQNN 1500
QI +KYKS + ++
Sbjct: 1576 THNEQINDKYKSNRTDS 1592
>SPBC31E1.01c [U] KOG2993 Cytoplasm to vacuole targeting protein
Length = 270
Score = 108 bits (271), Expect = 5e-23
Identities = 71/314 (22%), Positives = 133/314 (41%), Gaps = 47/314 (14%)
Query: 1181 DILYIQRLEINSVRLLLDYKPKKVDYAGLKSGKTKEFMNFFILDEARIKLKHVILYGVNG 1240
D+ + Q + IN+ + +D+K K D GL+SGK + + ++ + + L+ + +YG++G
Sbjct: 1 DLPFFQSICINATHVTIDFKFKSADKVGLRSGKLPDLGSLIVMQGSEVFLRQLQIYGLSG 60
Query: 1241 FPQLETILSDIWTPDITKTQIPGILSALTPLKPLAGLSYGARALISVPTEHYQQNGRFGG 1300
+ L ++W DI Q+ +L+ + P++ + + G + + P Q N G
Sbjct: 61 AEEFLNALLNVWLQDIRNNQLSKVLNGVVPIRTMFTVGRGIKDIFVSPVRGLQGNHSVG- 119
Query: 1301 SLQNGGMVFLKTTGGEVIKLAVRLTSGTQTILENTEKLLGGQGITGRNVPITLVEGDEKV 1360
S ++G + F + + + L + +GT ++L E L
Sbjct: 120 SFRHGIIKFTEKYVNDFLSLNAQGATGTHSLLRQAESYL--------------------- 158
Query: 1361 DALIDESLLRSTALFNKEPDNKSNHLDVLLADGNHQKVLSLYADQPKDFNSGLQDAYESM 1420
+ SN A + + S YA+QP+ GL+ Y +
Sbjct: 159 -------------------ERGSN------ASASASRARSYYAEQPETIEQGLRQGYSGL 193
Query: 1421 ERNLYLTFDSMXXXXXXXXXXXXXQEAVSTVAKAAPFVLIRPLIGVTEALSKTLQGLNNQ 1480
++ L ++ TV + P ++++P+IG TEA+SKTL GL+N
Sbjct: 194 KQGLLGAKSTLMGLPRETRSHKSLGGVAQTVGRKVPLIVLQPMIGATEAVSKTLLGLSNS 253
Query: 1481 YDEDRIAQIEEKYK 1494
R + EKYK
Sbjct: 254 LQPQRRQDMREKYK 267
>At3g19190 [U] KOG2993 Cytoplasm to vacuole targeting protein
Length = 1814
Score = 80.9 bits (198), Expect = 1e-14
Identities = 58/185 (31%), Positives = 89/185 (47%), Gaps = 20/185 (10%)
Query: 1184 YIQRLEINSVRLLLDYKPKKVDYAGLKSGKTKEFMNF-------FILDEA----RIKLKH 1232
Y Q+ +I V + +DY P VD A L GK E +N I +E ++LKH
Sbjct: 1507 YFQKFDIWPVNVRVDYSPHHVDIAALTGGKYAELVNLVPWKHNLLITEEQMQGIELQLKH 1566
Query: 1233 VILYGVNGFPQL-ETILSDIWTPDITKTQIPGILSALTPLKPLAGLSYGARALISVPTEH 1291
V G+ G+ + ETIL + W D+++ QI +L + ++ L+ L A L+S P E
Sbjct: 1567 VHAAGIYGWGNVCETILGE-WLEDVSQNQIHQLLKGIPTVRSLSALYAAALKLVSSPVES 1625
Query: 1292 YQQNGRFGGSLQNGGMVFLKTTGGEVIKLAVRLTSGTQTILENTEKLLGG-------QGI 1344
Y+++ R +Q G + FL++ E + L V L +G IL E + QG
Sbjct: 1626 YRKDRRLVKGVQRGTVAFLRSISLEAVGLGVHLAAGAHDILLRAEYIFASSPSLPQPQGR 1685
Query: 1345 TGRNV 1349
T NV
Sbjct: 1686 TKTNV 1690
>Hs20558378 [U] KOG2993 Cytoplasm to vacuole targeting protein
Length = 1938
Score = 75.5 bits (184), Expect = 6e-13
Identities = 78/327 (23%), Positives = 124/327 (37%), Gaps = 59/327 (18%)
Query: 1177 DEYPDILYIQRLEINS-VRLLLDYKPKKVD------YAGLKSGKTKEFMNFFILDEARIK 1229
D+ P +Y + S V + LDY K V +AGL G + L+ + +K
Sbjct: 1658 DQQP--IYFREFRFTSEVPIWLDYHGKHVTMDQVGTFAGLLIGLAQ-------LNCSELK 1708
Query: 1230 LKHVIL-YGVNGFPQLETILSDIWTPDITKTQIPGILSALTPLKPLAGLSYGARALISVP 1288
LK + +G+ G ++ + W DI K Q+PG+L + P+ + L G R L+ +P
Sbjct: 1709 LKRLCCRHGLLGVDKVLGYALNEWLQDIRKNQLPGLLGGVGPMHSVVQLFQGFRDLLWLP 1768
Query: 1289 TEHYQQNGRFGGSLQNGGMVFLKTTGGEVIKLAVRLTSGTQTILENTEKLLGGQGITGRN 1348
E Y+++GR LQ G F +T ++L+ RL Q E +L R+
Sbjct: 1769 IEQYRKDGRLMRGLQRGAASFGSSTASAALELSNRLVQAIQATAETVYDILSPAAPVSRS 1828
Query: 1349 VPITLVEGDEKVDALIDESLLRSTALFNKEPDNKSNHLDVLLADGNHQKVLSLYADQPKD 1408
L D + L QP D
Sbjct: 1829 -----------------------------------------LQDKRSARRLR-RGQQPAD 1846
Query: 1409 FNSGLQDAYESMERNLYLTFDSMXXXXXXXXXXXXXQEAVSTVAKAAPFVLIRPLIGVTE 1468
G+ AY+++ + T ++ AV V + P +++PLI TE
Sbjct: 1847 LREGVAKAYDTVREGILDTAQTICDVASRGHEQKGLTGAVGGVIRQLPPTVVKPLILATE 1906
Query: 1469 ALSKTLQGLNNQYDEDRIAQIEEKYKS 1495
A S L G+ NQ D K++S
Sbjct: 1907 ATSSLLGGMRNQIVPDAHKDHALKWRS 1933
>7292279 [U] KOG2993 Cytoplasm to vacuole targeting protein
Length = 1906
Score = 72.8 bits (177), Expect = 4e-12
Identities = 76/317 (23%), Positives = 129/317 (39%), Gaps = 69/317 (21%)
Query: 1089 VSDLEIIDNLPTSTWNKFLTRSRSNDKMAQEPA--MLVIECSLIRPVPHLY-ATELICNI 1145
VS++EI D L +S NKFL N+ ++ +P M++++ +RP P A E +
Sbjct: 1478 VSEIEIRDRLRSSDINKFLYHPTGNN-LSHKPDENMVIVKALNVRPNPQKSSAEECSLRV 1536
Query: 1146 NIVPLTLHVDQDTLEFLTLFFQ--FKDNRF---------------------------ELL 1176
+I+P+ L++DQDTL FL FF F+++ EL
Sbjct: 1537 SILPIKLNIDQDTLLFLEDFFSGMFRNSASAAGGTKTEGSSSSATDMPVMSVSKMPEELS 1596
Query: 1177 DEYPDILYIQRLEIN---------------------------------SVRLLLDYKPKK 1203
D+ PD + +E N ++ + DY ++
Sbjct: 1597 DKLPDSEVKEMVERNLNVLIEENSLDVELEEDPATAPPVFFREVIFSPALPICFDYHGRR 1656
Query: 1204 VDYAGLKSGKTKEFMNFFILDEARIKLKHVI-LYGVNGFPQLETILSDIWTPDITKTQIP 1262
++ + + T M L + I L+ ++ G+ G+ +L L+ W DI + Q+P
Sbjct: 1657 IELS--RGPVTGLIMGLAQLQGSGINLREIVNRRGILGWNKLCEFLAKEWLKDIKRNQLP 1714
Query: 1263 GILSALTPLKPLAGLSYGARALISVPTEHYQQNGRFGGSLQNGGMVFLKTTGGEVIKLAV 1322
ILS + P + L G L +P E Y ++GR Q G F T +++
Sbjct: 1715 NILSGIGPTNAVLQLFQGIYDLFRLPIEQYNKDGRIIRGFQLGAQSFTARTALAALEITS 1774
Query: 1323 RLTSGTQTILENTEKLL 1339
R+ Q E T +L
Sbjct: 1775 RIIHLLQFTAETTFDML 1791
>Hs21361678 [U] KOG2993 Cytoplasm to vacuole targeting protein
Length = 662
Score = 71.6 bits (174), Expect = 9e-12
Identities = 73/310 (23%), Positives = 118/310 (37%), Gaps = 56/310 (18%)
Query: 1191 NSVRLLLDYKPKKVDY-----AGLKSGKTKEFMNFFILDEARIKLKHVIL-YGVNGFPQL 1244
+ V + LDY K V AG+ G + L+ + +KLK + +G+ G +L
Sbjct: 399 SEVPIRLDYHGKHVSMDQGTLAGILIGLAQ-------LNCSELKLKRLSYRHGLLGVDKL 451
Query: 1245 ETILSDIWTPDITKTQIPGILSALTPLKPLAGLSYGARALISVPTEHYQQNGRFGGSLQN 1304
+ W DI K Q+PGIL + P+ L L G + L+ +P E Y+++GR Q
Sbjct: 452 FSYAITEWLNDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGRIVRGFQR 511
Query: 1305 GGMVFLKTTGGEVIKLAVRLTSGTQTILENTEKLLGGQGITGRNVPITLVEGDEKVDALI 1364
G F +T ++L R+ Q E ++ P TL +K
Sbjct: 512 GAASFGTSTAMAALELTNRMVQTIQAAAETAYDMVS---------PGTLSIEPKKT---- 558
Query: 1365 DESLLRSTALFNKEPDNKSNHLDVLLADGNHQKVLSLYADQPKDFNSGLQDAYESMERNL 1424
+ P ++ H QP D G+ AY ++ +
Sbjct: 559 -----------KRFPHHRLAH-------------------QPVDLREGVAKAYSVVKEGI 588
Query: 1425 YLTFDSMXXXXXXXXXXXXXQEAVSTVAKAAPFVLIRPLIGVTEALSKTLQGLNNQYDED 1484
T ++ AV V + P +++PLI TEA S L G+ NQ D
Sbjct: 589 TDTAQTIYETAAREHESRGVTGAVGEVLRQIPPAVVKPLIVATEATSNVLGGMRNQIRPD 648
Query: 1485 RIAQIEEKYK 1494
+K++
Sbjct: 649 VRQDESQKWR 658
>HsM8922305 [U] KOG2993 Cytoplasm to vacuole targeting protein
Length = 662
Score = 71.2 bits (173), Expect = 1e-11
Identities = 73/310 (23%), Positives = 117/310 (37%), Gaps = 56/310 (18%)
Query: 1191 NSVRLLLDYKPKKVDY-----AGLKSGKTKEFMNFFILDEARIKLKHVIL-YGVNGFPQL 1244
+ V + LDY K V AG+ G + L+ + +KLK + +G+ G +L
Sbjct: 399 SEVPIRLDYHGKHVSMDQGTLAGILIGLAQ-------LNCSELKLKRLSYRHGLLGVDKL 451
Query: 1245 ETILSDIWTPDITKTQIPGILSALTPLKPLAGLSYGARALISVPTEHYQQNGRFGGSLQN 1304
+ W DI K Q+PGIL + P+ L L G L+ +P E Y+++GR Q
Sbjct: 452 FSYAITEWLNDIKKNQLPGILGGVGPMHSLVQLVQGLEDLVWLPIEQYRKDGRIVRGFQR 511
Query: 1305 GGMVFLKTTGGEVIKLAVRLTSGTQTILENTEKLLGGQGITGRNVPITLVEGDEKVDALI 1364
G F +T ++L R+ Q E ++ P TL +K
Sbjct: 512 GAASFGTSTAMAALELTNRMVQTIQAAAETAYDMVS---------PGTLSIEPKKT---- 558
Query: 1365 DESLLRSTALFNKEPDNKSNHLDVLLADGNHQKVLSLYADQPKDFNSGLQDAYESMERNL 1424
+ P ++ H QP D G+ AY ++ +
Sbjct: 559 -----------KRFPHHRLAH-------------------QPVDLREGVAKAYSVVKEGI 588
Query: 1425 YLTFDSMXXXXXXXXXXXXXQEAVSTVAKAAPFVLIRPLIGVTEALSKTLQGLNNQYDED 1484
T ++ AV V + P +++PLI TEA S L G+ NQ D
Sbjct: 589 TDTAQTIYETAAREHESRGVTGAVGEVLRQIPPAVVKPLIVATEATSNVLGGMRNQIGPD 648
Query: 1485 RIAQIEEKYK 1494
+K++
Sbjct: 649 VRQDESQKWR 658
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.133 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,696,316
Number of Sequences: 60738
Number of extensions: 3361915
Number of successful extensions: 10417
Number of sequences better than 1.0e-05: 7
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 10375
Number of HSP's gapped (non-prelim): 23
length of query: 1502
length of database: 30,389,216
effective HSP length: 119
effective length of query: 1383
effective length of database: 23,161,394
effective search space: 32032207902
effective search space used: 32032207902
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)