ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV0331 good P KOG0876 Inorganic ion transport and metabolism Manganese superoxide dismutase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV0331 119812 120570 253
(253 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YJR101w [P] KOG0876 Manganese superoxide dismutase 299 2e-81
SPBC16A3.14 [P] KOG0876 Manganese superoxide dismutase 77 2e-14
SPBC3H7.04 [P] KOG0876 Manganese superoxide dismutase 74 2e-13
At5g51100 [P] KOG0876 Manganese superoxide dismutase 55 1e-07
>YJR101w [P] KOG0876 Manganese superoxide dismutase
Length = 266
Score = 299 bits (766), Expect = 2e-81
Identities = 143/257 (55%), Positives = 185/257 (71%), Gaps = 15/257 (5%)
Query: 10 RGIHTVPKIPGISQLLDSGIPHVMSANTFKTCWVDQQQLLCDKLTLASAGTAAESYLPFH 69
RGIH VPK+P LL +G+P+++S++ FKT W D Q+ LCDKLTLA+AG + ESY PFH
Sbjct: 6 RGIHVVPKLPNSKALLQNGVPNILSSSGFKTVWFDYQRYLCDKLTLATAGQSLESYYPFH 65
Query: 70 LVLHTAKKSYQTNIFNLASALHNNHLFIENILPME----------QVTHPSREFLQKLES 119
++L TA Q+NIFNLAS++HNNHLF+ENILP T PSR FL K++
Sbjct: 66 ILLKTAGNPLQSNIFNLASSIHNNHLFVENILPSAVEHGTNSNAVVKTEPSRLFLSKIKD 125
Query: 120 QYS-MTWDAFKDEMVRHAEEDVLGQGWLFLVENDAKELHILTVQNNGTPYYFARNQSFDL 178
++ W+ K+EM+ AE +VLGQGWLFLVEN+ K+L ILT NNGTPYYF RNQSFDL
Sbjct: 126 SFNGSDWEVVKEEMIYRAENEVLGQGWLFLVENNEKKLFILTSNNNGTPYYFPRNQSFDL 185
Query: 179 NSALSLEEMEQFVTMRDLLA----ANADVKDWTMPLIAISLWDHSYLNDYGIKGRSTYVR 234
NSA+S++E M++L+ N V+DWTMP+I ++LWDH+YL+DYG+ RS YV+
Sbjct: 186 NSAISIDEFATLKQMKELIGKSTKLNGKVQDWTMPIICVNLWDHAYLHDYGVGNRSKYVK 245
Query: 235 KCLDNLNWSAVNNRLFS 251
LDNLNWS VNNR+FS
Sbjct: 246 NVLDNLNWSVVNNRIFS 262
>SPBC16A3.14 [P] KOG0876 Manganese superoxide dismutase
Length = 277
Score = 77.0 bits (188), Expect = 2e-14
Identities = 58/242 (23%), Positives = 101/242 (40%), Gaps = 22/242 (9%)
Query: 13 HTVPKIPGISQLLDSGIPHVMSANTFKTCWVDQQQLLCDKLTLASAGTAAESYLPFHLVL 72
HTVP L + + S W Q+ + +L GT E F+++
Sbjct: 39 HTVPN------LSQRNLLPLFSPEALDIAWDQHQRQVVKELNDRVKGTELEDSSVFNIIF 92
Query: 73 HTAKKSYQTNIFNLASALHNNHLFIENILPMEQVTHPSREFLQKLESQYSMTWDAF--KD 130
TA F AS +NNH F ++++ + + + F K+
Sbjct: 93 QTAALPEHAATFQFASQAYNNHFFFQSLIGKRAADAKKNSKYEANAAINKAVNENFGSKE 152
Query: 131 EMVRHAEE---DVLGQGWLFLVENDAKELHILTVQNNGTPYYFARNQSFDLNSALSLEEM 187
++ E + G WL++V +D L++L G+PY + R QS D + S+ +
Sbjct: 153 NLLSKIHELASNSFGACWLWIVIDDYNRLNLLRTFQAGSPYLWTRWQSNDPHLISSVPDY 212
Query: 188 EQFVTMRDLLAANADVKDWTMPLIAISLWDHSYLNDYGIKGRSTYVRKCLDNLNWSAVNN 247
+ R A+ +P++ + LW+H+Y DYG+ RS Y+ D ++WS +
Sbjct: 213 ----SARPRKYAH-------VPILNLCLWNHAYYKDYGLLNRSRYIDTWFDCIDWSVIEE 261
Query: 248 RL 249
RL
Sbjct: 262 RL 263
>SPBC3H7.04 [P] KOG0876 Manganese superoxide dismutase
Length = 220
Score = 73.9 bits (180), Expect = 2e-13
Identities = 54/191 (28%), Positives = 90/191 (46%), Gaps = 28/191 (14%)
Query: 66 LPFHLVLHTAKKSYQTNIFNLASALHNNHLFIENILPMEQVTHPSREFLQKLESQYSMTW 125
+P L++ +A + N+FN +S L N+ F ++ E+ + + L+ ++
Sbjct: 51 VPSDLMVQSASDPARANLFNYSSQLVNHDFFFSGLISPERPSADADLGAINLKPGIDASF 110
Query: 126 DAF---KDEMVRHAEEDVLGQGWLFLVENDAKELHILTVQNNGTPYYFARNQSFDLNSAL 182
+F K +MV V G GWL+LV + K L L N + N+ L
Sbjct: 111 GSFGELKSQMV-DVGNSVFGDGWLWLVYSPEKSLFSLLCTYNAS------------NAFL 157
Query: 183 SLEEMEQFVTMRDLLAANADVKDWTMPLIAISLWDHSYLNDYGIKGRSTYVRKCLDNLNW 242
+F T NA V PL+ ++LW ++YL+DYG+ G+ Y+ K D +NW
Sbjct: 158 WGTGFPKFRT-------NAIV-----PLLCVNLWQYAYLDDYGLNGKKMYITKWWDMINW 205
Query: 243 SAVNNRLFSTQ 253
+ VNNR +T+
Sbjct: 206 TVVNNRFQATR 216
>At5g51100 [P] KOG0876 Manganese superoxide dismutase
Length = 305
Score = 54.7 bits (130), Expect = 1e-07
Identities = 61/228 (26%), Positives = 99/228 (42%), Gaps = 25/228 (10%)
Query: 25 LDSGIPHVMSANTFKTCWVDQQQLLCDKLTLASAGTAAESYLPFHLVLHTAKKSYQTNIF 84
LD+ PH MS T W + + L GT ++ +VL + K F
Sbjct: 62 LDALEPH-MSRETLDYHWGKHHKTYVENLNKQILGTDLDALSLEEVVLLSYNKGNMLPAF 120
Query: 85 NLASALHNNHLFIENILPMEQVTHPSREFLQKLESQYSMTWDAFKDEMVRHAEEDVLGQG 144
N A+ N+ F E+I P P+ E L+ +E + +++ F E + A G G
Sbjct: 121 NNAAQAWNHEFFWESIQPGGG-GKPTGELLRLIERDFG-SFEEFL-ERFKSAAASNFGSG 177
Query: 145 WLFLVENDAKELHILTVQNNGTPYYFARNQSFDLNSALSLEEMEQFVTMRDLLAANADVK 204
W +L A + + L V N P L EE ++ V ++ A N V
Sbjct: 178 WTWL----AYKANRLDVANAVNP--------------LPKEEDKKLVIVKTPNAVNPLVW 219
Query: 205 DWTMPLIAISLWDHSYLNDYGIKGRSTYVRKCLDNL-NWSAVNNRLFS 251
D++ PL+ I W+H+Y D+ + R+ Y+ ++ L +W V+ RL S
Sbjct: 220 DYS-PLLTIDTWEHAYYLDFENR-RAEYINTFMEKLVSWETVSTRLES 265
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.321 0.134 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,033,926
Number of Sequences: 60738
Number of extensions: 614710
Number of successful extensions: 2094
Number of sequences better than 1.0e-05: 4
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2086
Number of HSP's gapped (non-prelim): 5
length of query: 253
length of database: 30,389,216
effective HSP length: 104
effective length of query: 149
effective length of database: 24,072,464
effective search space: 3586797136
effective search space used: 3586797136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)