ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV0496 good E KOG1250 Amino acid transport and metabolism Threonine/serine dehydratases
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV0496 174093 173128 -322
(322 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YCL064c [E] KOG1250 Threonine/serine dehydratases 277 2e-74
Hs19923959 [E] KOG1250 Threonine/serine dehydratases 122 7e-28
Hs5803161 [E] KOG1250 Threonine/serine dehydratases 114 2e-25
7299166 [E] KOG1250 Threonine/serine dehydratases 84 4e-16
At3g10050 [E] KOG1250 Threonine/serine dehydratases 69 1e-11
SPBC1677.03c [E] KOG1250 Threonine/serine dehydratases 68 2e-11
CE26153 [E] KOG1250 Threonine/serine dehydratases 66 8e-11
YER086w [E] KOG1250 Threonine/serine dehydratases 64 4e-10
CE02261 [E] KOG1250 Threonine/serine dehydratases 59 1e-08
YKL218c [TE] KOG1251 Serine racemase 52 2e-06
At4g11640 [TE] KOG1251 Serine racemase 50 3e-06
>YCL064c [E] KOG1250 Threonine/serine dehydratases
Length = 360
Score = 277 bits (708), Expect = 2e-74
Identities = 143/321 (44%), Positives = 200/321 (61%), Gaps = 8/321 (2%)
Query: 7 KTPLLPFREPLNGGPTFLLKYENLQPGGSFKSRGISHLI-KTTMDSISDPENELAVYXXX 65
KTPLL P F LKYE LQP GSFKSRGI +LI K+ + D + V+
Sbjct: 7 KTPLLRQFFPGKASAQFFLKYECLQPSGSFKSRGIGNLIMKSAIRIQKDGKRSPQVFASS 66
Query: 66 XXXXXXXXXXXXXTLKVPCTVIVPKSTKPRMIKKIESAGAKVVIFGDHWKEADTYLREYV 125
L +PCTV+VP +TK RM+ KI + GA+V++ G +WKEADT+L+ V
Sbjct: 67 GGNAGFAAATACQRLSLPCTVVVPTATKKRMVDKIRNTGAQVIVSGAYWKEADTFLKTNV 126
Query: 126 MRQ--SSYSNTLYVHPFDNPIIWDGHSTMIDEIIEQLAESHTDINDVKGIVCSXXXXXXX 183
M + S +YVHPFDNP IW+GHS+MIDEI++ L H +N VKGIVCS
Sbjct: 127 MNKIDSQVIEPIYVHPFDNPDIWEGHSSMIDEIVQDLKSQHISVNKVKGIVCSVGGGGLY 186
Query: 184 XXXXXXXERHGLAGSIPVFAMETDGCDVLSKSLIAGEPVVLDRISSIATSLGSTEICADS 243
ER+GLA IP+ +ET+GC V + SL G+PV +I+SIATSLG+ I +
Sbjct: 187 NGIIQGLERYGLADRIPIVGVETNGCHVFNTSLKIGQPVQFKKITSIATSLGTAVISNQT 246
Query: 244 FQKAIKFSSKSIVLDDKNVVDTCLRFFDETSILVEPACGASLHTCYRPELL-----GPLG 298
F+ A K++++S+V++DK+V++TCL++ + ++++EPACGA+LH Y ++L L
Sbjct: 247 FEYARKYNTRSVVIEDKDVIETCLKYTHQFNMVIEPACGAALHLGYNTKILENALGSKLA 306
Query: 299 PDDIVVVILCGGSCNTYDDLK 319
DDIV++I CGGS NT DL+
Sbjct: 307 ADDIVIIIACGGSSNTIKDLE 327
>Hs19923959 [E] KOG1250 Threonine/serine dehydratases
Length = 329
Score = 122 bits (306), Expect = 7e-28
Identities = 92/314 (29%), Positives = 149/314 (47%), Gaps = 25/314 (7%)
Query: 6 IKTPLLPF--REPLNGGPTFLLKYENLQPGGSFKSRGISHLIKTTMDSISDPENELAVYX 63
+ TPLL + G P FL K EN+QP GSFK RGI H + + +
Sbjct: 16 VVTPLLESWALSQVAGMPVFL-KCENVQPSGSFKIRGIGHFCQEMAK-----KGCRHLVC 69
Query: 64 XXXXXXXXXXXXXXXTLKVPCTVIVPKSTKPRMIKKIESAGAKVVIFGDHWKEADTYLRE 123
L +P T+++P+ST +++++++ GA+V + G W EA+ +E
Sbjct: 70 SSGGNAGIAAAYAARKLGIPATIVLPESTSLQVVQRLQGEGAEVQLTGKVWDEANLRAQE 129
Query: 124 YVMRQSSYSNTLYVHPFDNPIIWDGHSTMIDEIIEQLAESHTDINDVKGIVCSXXXXXXX 183
+ ++ + N V PFD+P+IW GH++++ E+ L + V +
Sbjct: 130 -LAKRDGWEN---VPPFDHPLIWKGHASLVQELKAVLRTPPGAL--VLAVGGGGLLAGVV 183
Query: 184 XXXXXXXERHGLAGSIPVFAMETDGCDVLSKSLIAGEPVVLDRISSIATSLGSTEICADS 243
+H +P+ AMET G + ++ AG+ V L I+S+A SLG+ + A +
Sbjct: 184 AGLLEVGWQH-----VPIIAMETHGAHCFNAAITAGKLVTLPDITSVAKSLGAKTVAARA 238
Query: 244 FQKAIKFSSKSIVLDDKNVVDTCLRFFDETSILVEPACGASLHTCY-----RPELLGPLG 298
+ S V++D V + D+ +LVEPACGA+L Y R + G L
Sbjct: 239 LECMQVCKIHSEVVEDTEAVSAVQQLLDDERMLVEPACGAALAAIYSGLLRRLQAEGCLP 298
Query: 299 PD-DIVVVILCGGS 311
P VVVI+CGG+
Sbjct: 299 PSLTSVVVIVCGGN 312
>Hs5803161 [E] KOG1250 Threonine/serine dehydratases
Length = 328
Score = 114 bits (285), Expect = 2e-25
Identities = 92/320 (28%), Positives = 145/320 (44%), Gaps = 28/320 (8%)
Query: 2 DQLTIKTPLLPFREPLN----GGPTFLLKYENLQPGGSFKSRGISHLIKTTMDSISDPEN 57
+ L +KTP+ R+ + G + LK ++ QP GSFK RGI H K +
Sbjct: 5 EPLHVKTPI---RDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAK-----QG 56
Query: 58 ELAVYXXXXXXXXXXXXXXXXTLKVPCTVIVPKSTKPRMIKKIESAGAKVVIFGDHWKEA 117
L VP T++VP +T I+++++ GA + G+ EA
Sbjct: 57 CAHFVCSSAGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATCKVVGELLDEA 116
Query: 118 DTYLREYVMRQSSYSNTLYVHPFDNPIIWDGHSTMIDEIIEQLAESHTDINDVKGIVCSX 177
+ + +Y+ PFD+P+IW+GH++++ E+ E L E I S
Sbjct: 117 FELAKALAKNNPGW---VYIPPFDDPLIWEGHASIVKELKETLWEKPG------AIALSV 167
Query: 178 XXXXXXXXXXXXXERHGLAGSIPVFAMETDGCDVLSKSLIAGEPVVLDRISSIATSLGST 237
+ G G +PV AMET G + AG+ V L +I+S+A +LG
Sbjct: 168 GGGGLLCGVVQGLQECGW-GDVPVIAMETFGAHSFHAATTAGKLVSLPKITSVAKALGVK 226
Query: 238 EICADSFQKAIKFSSKSIVLDDKNVVDTCLRFFDETSILVEPACGASL-----HTCYRPE 292
+ + + + + S V+ D+ V +F D+ ILVEPA GA+L H + +
Sbjct: 227 TVGSQALKLFQEHPIFSEVISDQEAVAAIEKFVDDEKILVEPAWGAALAAVYSHVIQKLQ 286
Query: 293 LLGPL-GPDDIVVVILCGGS 311
L G L P +VVI+CGGS
Sbjct: 287 LEGNLRTPLPSLVVIVCGGS 306
>7299166 [E] KOG1250 Threonine/serine dehydratases
Length = 469
Score = 83.6 bits (205), Expect = 4e-16
Identities = 71/295 (24%), Positives = 126/295 (42%), Gaps = 19/295 (6%)
Query: 20 GPTFLLKYENLQPGGSFKSRGISHLIKTTMDSISDPENELAVYXXXXXXXXXXXXXXXXT 79
G LK + LQ GSFK RG + + S+++ + V
Sbjct: 90 GMELYLKKDFLQYTGSFKERGARYALL----SLTEEQKRTGVISASLGNHAQALCYHGWK 145
Query: 80 LKVPCTVIVPKSTKPRMIKKIESAGAKVVIFGDHWKEADTYLREYVMRQSSYSNTLYVHP 139
L +P TV++PK+ I+K + A+V++ G+ EA + MR S LYV+
Sbjct: 146 LNIPVTVVMPKAAPIMKIQKCRNYKARVIVDGNDMGEA----KSLAMRMSREEGLLYVNG 201
Query: 140 FDNPIIWDGHSTMIDEIIEQLAESHTDINDVKGIVCSXXXXXXXXXXXXXXERHGLAGSI 199
+D+P I G T+ EI+EQ+ E + V G L+
Sbjct: 202 YDHPHIMAGQGTIGLEILEQVPEPDAVVVPVGG---------GGLIAGIATAVKALSPKT 252
Query: 200 PVFAMETDGCDVLSKSLIAGEPVVLDRISSIATSLGSTEICADSFQKAIKFSSKSIVLDD 259
+ +E++ C ++++ P+ +++A L ++ +++ A+ + +V+ +
Sbjct: 253 KIIGVESEKCASFTRAMENDGPIHTPIKNTLADGLAVPKVGYNAYATAMPLIDRMVVVKE 312
Query: 260 KNVVDTCLRFFDETSILVEPACGASLHTCYRPELLGPLGPDDIVVVILCGGSCNT 314
+ + LR +E +VE A GA L L G VVV+LCGG+ +T
Sbjct: 313 EWIAVAILRLVEEEKCVVEGAGGAGLAAILAGHLDELKGKK--VVVLLCGGNIDT 365
>At3g10050 [E] KOG1250 Threonine/serine dehydratases
Length = 592
Score = 68.6 bits (166), Expect = 1e-11
Identities = 66/307 (21%), Positives = 126/307 (40%), Gaps = 32/307 (10%)
Query: 20 GPTFLLKYENLQPGGSFKSRGISHLIKTTMDSISDPENELAVYXXXXXXXXXXXXXXXXT 79
G LK E+LQP SFK RG +++ + P ++LA
Sbjct: 124 GVRMYLKREDLQPVFSFKLRGAYNMM------VKLPADQLAKGVICSSAGNHAQGVALSA 177
Query: 80 LKVPCT--VIVPKSTKPRMIKKIESAGAKVVIFGDHWKEADTYLREYVMRQSSYSNTLYV 137
K+ CT +++P +T + +E+ GA VV+FGD + +A + + ++ ++
Sbjct: 178 SKLGCTAVIVMPVTTPEIKWQAVENLGATVVLFGDSYDQAQAHAKI----RAEEEGLTFI 233
Query: 138 HPFDNPIIWDGHSTMIDEIIEQLAESHTDINDVKGIVCSXXXXXXXXXXXXXXERHGLAG 197
PFD+P + G T+ EI Q + I +R ++
Sbjct: 234 PPFDHPDVIAGQGTVGMEITRQAK------GPLHAIFVPVGGGGLIAGIAAYVKR--VSP 285
Query: 198 SIPVFAMETDGCDVLSKSLIAGEPVVLDRISSIATSLGSTEICADSFQKAIKFSSKSIVL 257
+ + +E + ++ SL GE V+LD++ A + E+ ++F+ + +++
Sbjct: 286 EVKIIGVEPADANAMALSLHHGERVILDQVGGFADGVAVKEVGEETFRISRNLMDGVVLV 345
Query: 258 DDKNVVDTCLRFFDETSILVEPA-----CGASLHTCYRPELLGPLGPDDIVVVILCGGSC 312
+ + F+E ++EPA GA + Y G D+ VV + G+
Sbjct: 346 TRDAICASIKDMFEEKRNILEPAGALALAGAEAYCKY-------YGLKDVNVVAITSGAN 398
Query: 313 NTYDDLK 319
+D L+
Sbjct: 399 MNFDKLR 405
>SPBC1677.03c [E] KOG1250 Threonine/serine dehydratases
Length = 600
Score = 68.2 bits (165), Expect = 2e-11
Identities = 61/261 (23%), Positives = 105/261 (39%), Gaps = 15/261 (5%)
Query: 20 GPTFLLKYENLQPGGSFKSRGISHLIKTTMDSISDPENELAVYXXXXXXXXXXXXXXXXT 79
G LK E+L P SFK RG + M S+ + V T
Sbjct: 127 GVPVYLKREDLTPVFSFKIRGAHN----KMASLDKQSLKNGVIACSAGNHAQGVAYSART 182
Query: 80 LKVPCTVIVPKSTKPRMIKKIESAGAKVVIFGDHWKEADTYLREYVMRQSSYSNTLYVHP 139
L V T+++P++T + ++ GA V++ G ++ A + R + N +HP
Sbjct: 183 LGVKATIVMPQNTPEIKWRNVKRLGANVLLHGANFDIA----KAECARLAKEQNLEVIHP 238
Query: 140 FDNPIIWDGHSTMIDEIIEQLAESHTDINDVKGIVCSXXXXXXXXXXXXXXERHGLAGSI 199
FD+P + G T+ EI+ Q+ D+ + I C+ +R +A +
Sbjct: 239 FDDPYVIAGQGTIGLEILHQI-----DLRKLDAIYCAVGGGGLIAGIATYVKR--IAPHV 291
Query: 200 PVFAMETDGCDVLSKSLIAGEPVVLDRISSIATSLGSTEICADSFQKAIKFSSKSIVLDD 259
V +ET D L KSL + V L + A + ++F+ K +++D
Sbjct: 292 KVIGVETFDADALKKSLKDKKRVTLKEVGLFADGTAVKLVGEETFRLVSKNIDDVVLVDK 351
Query: 260 KNVVDTCLRFFDETSILVEPA 280
+ F +T +VEP+
Sbjct: 352 DEICAAIKDVFLDTRSVVEPS 372
>CE26153 [E] KOG1250 Threonine/serine dehydratases
Length = 448
Score = 65.9 bits (159), Expect = 8e-11
Identities = 65/290 (22%), Positives = 114/290 (38%), Gaps = 19/290 (6%)
Query: 25 LKYENLQPGGSFKSRGISHLIKTTMDSISDPENELAVYXXXXXXXXXXXXXXXXTLKVPC 84
LK E Q GSFK RG + ++ ++ + + + VY L V
Sbjct: 76 LKMEVNQDTGSFKERGARYALQ----NLPEEKKKAGVYAASAGNHALALSLHGKQLGVEV 131
Query: 85 TVIVPKSTKPRMIKKIESAGAKVVIFGDHWKEADTYLREYVMRQSSYSNTLYVHPFDNPI 144
V++PK I + + GA +++ G+ E+ RE +R + SN Y++ +D+
Sbjct: 132 NVVMPKIAPLMKINRCQDLGANILVQGEDIAES----REIALRMAHDSNGTYINGYDHYD 187
Query: 145 IWDGHSTMIDEIIEQLAESHTDINDVKGIVCSXXXXXXXXXXXXXXERHGLAGSIPVFAM 204
I G T EI+EQ+ + V G L+ + V +
Sbjct: 188 ILAGAGTTGIEILEQIQMPDAILVPVGG---------GGLVAGVATAVKALSPTTEVIGV 238
Query: 205 ETDGCDVLSKSLIAGEPVVLDRISSIATSLGSTEICADSFQKAIKFSSKSIVLDDKNVVD 264
++ C + KSL AG PV ++A L ++F I + I + + ++
Sbjct: 239 VSETCQAIVKSLQAGHPVYTPTRPTLADGLAVPNAGVNAFASMIGKVDRVISVPENDIAV 298
Query: 265 TCLRFFDETSILVEPACGASLHTCYRPELLGPLGPDDIVVVILCGGSCNT 314
LR + ++ E A + +L G VV IL GG+ ++
Sbjct: 299 AILRLIENEKVVCEGAGAIGIGAILSGKLNHLKG--KTVVSILSGGNIDS 346
>YER086w [E] KOG1250 Threonine/serine dehydratases
Length = 576
Score = 63.5 bits (153), Expect = 4e-10
Identities = 55/262 (20%), Positives = 108/262 (40%), Gaps = 14/262 (5%)
Query: 24 LLKYENLQPGGSFKSRGISHLIKTTMDSISDPENELAVYXXXXXXXXXXXXXXXXTLKVP 83
+LK E+L P SFK RG ++I + D + V LK+P
Sbjct: 96 ILKREDLLPVFSFKLRGAYNMIA----KLDDSQRNQGVIACSAGNHAQGVAFAAKHLKIP 151
Query: 84 CTVIVPKSTKPRMIKKIESAGAKVVIFGDHWKEADTYLREYVMRQSSYSNTLYVHPFDNP 143
T+++P T + + G++VV++G+ + EA + + + +N + PFD+P
Sbjct: 152 ATIVMPVCTPSIKYQNVSRLGSQVVLYGNDFDEAKAECAK-LAEERGLTN---IPPFDHP 207
Query: 144 IIWDGHSTMIDEIIEQLAESHTDINDVKGIVCSXXXXXXXXXXXXXXERHGLAGSIPVFA 203
+ G T+ EI+ Q+ + N + + +R +A I +
Sbjct: 208 YVIAGQGTVAMEILRQVRTA----NKIGAVFVPVGGGGLIAGIGAYLKR--VAPHIKIIG 261
Query: 204 METDGCDVLSKSLIAGEPVVLDRISSIATSLGSTEICADSFQKAIKFSSKSIVLDDKNVV 263
+ET L SL + L + + A I ++F+ A + + ++++ +
Sbjct: 262 VETYDAATLHNSLQRNQRTPLPVVGTFADGTSVRMIGEETFRVAQQVVDEVVLVNTDEIC 321
Query: 264 DTCLRFFDETSILVEPACGASL 285
F++T +VEP+ S+
Sbjct: 322 AAVKDIFEDTRSIVEPSGALSV 343
>CE02261 [E] KOG1250 Threonine/serine dehydratases
Length = 512
Score = 58.5 bits (140), Expect = 1e-08
Identities = 64/298 (21%), Positives = 118/298 (39%), Gaps = 24/298 (8%)
Query: 26 KYENLQPGGSFKSRGISHLIKTTMDSISDPENELAVYXXXXXXXXXXXXXXXXTLKVPCT 85
K E LQ GSFK RG + + +++ + V + +P T
Sbjct: 137 KKEYLQVTGSFKERGARY----ALSKMAEQFKKAGVIAASAGNHALALSYHGQQMGIPVT 192
Query: 86 VIVPKSTKPRMIKKIESAGAKVVIFGDHWKEADTYLREYVMRQSSYSNTLYVHPFDNPII 145
V++P I+ S GA V++ G E+ +++ +R + ++ Y++ +D I
Sbjct: 193 VVMPVIAPLMKIQFCRSLGATVILKG----ESIAVAKDFALRHAKENHLKYINGYDAIDI 248
Query: 146 WDGHSTMIDEIIEQLAESHTDINDVKGIVCSXXXXXXXXXXXXXXERHGLAGSIPVFA-- 203
G T+ EI++Q+ + T + V G + H S + A
Sbjct: 249 LAGQGTIGLEILDQVPDVDTILVPVGG--GGLIAGIATAVKTLKPDVHIYVSSFLIIANF 306
Query: 204 ----METDGCDVLSKSLIAGEPVVLDRISSIATSLGSTEICADSFQKAIKFSSKSIVLDD 259
+E++ C +++ AG + +S+A L + +S + A K I + +
Sbjct: 307 KVTGIESETCPSFTEAYEAGHIITSQAKASLADGLAVPTVGGNSLETAKGLVDKVITVKE 366
Query: 260 KNVVDTCLRFFDETSILVEPACGASLHTCYR---PELLGPLGPDDIVVVILCGGSCNT 314
+++ + LR + +VE L PEL G VV IL GG+ +T
Sbjct: 367 ESIALSILRLLEVEKAVVEGGGAVGLAAILEGKVPELKGKK-----VVSILSGGNIDT 419
>YKL218c [TE] KOG1251 Serine racemase
Length = 326
Score = 51.6 bits (122), Expect = 2e-06
Identities = 67/311 (21%), Positives = 123/311 (39%), Gaps = 31/311 (9%)
Query: 7 KTPLLPFREPLNG--GPTFLLKYENLQPGGSFKSRGISHLIKTTMDSISDPENELAVYXX 64
KTP+L R LN G K EN Q G+FK RG + + +SD + V
Sbjct: 22 KTPVLTSRM-LNDRLGAQIYFKGENFQRVGAFKFRGAMNAVS----KLSDEKRSKGVIAF 76
Query: 65 XXXXXXXXXXXXXXTLKVPCTVIVPKSTKPRMIKKIESAGAKVVIFGDHWKEADTYLREY 124
L VP T+++P+ + GA ++ + + ++ RE
Sbjct: 77 SSGNHAQAIALSAKLLNVPATIVMPEDAPALKVAATAGYGAHIIRYNRYTED-----REQ 131
Query: 125 VMRQ-SSYSNTLYVHPFDNPIIWDGHSTMIDEIIEQLAESHTDINDVKGIVCSXXXXXXX 183
+ RQ ++ + P+D+P + G T E++E++ + + G
Sbjct: 132 IGRQLAAEHGFALIPPYDHPDVIAGQGTSAKELLEEVGQLDALFVPLGG---------GG 182
Query: 184 XXXXXXXERHGLAGSIPVFAMETDGCDVLSKSLIAGEPVVLDRISSIATSLGSTEICADS 243
L+ +F +E + + +S +G V ++ +IA + + +
Sbjct: 183 LLSGSALAARSLSPGCKIFGVEPEAGNDGQQSFRSGSIVHINTPKTIADGAQTQHLGEYT 242
Query: 244 FQKAIKFSSKSIVLDDKNVVDTCLRFFDE-TSILVEP-AC-GASLHTCYRPELLGPLGPD 300
F + + + D+ +V C+ F E ++VEP AC G + + EL+G
Sbjct: 243 FAIIRENVDDILTVSDQELV-KCMHFLAERMKVVVEPTACLGFAGALLKKEELVGKK--- 298
Query: 301 DIVVVILCGGS 311
V +IL GG+
Sbjct: 299 --VGIILSGGN 307
>At4g11640 [TE] KOG1251 Serine racemase
Length = 346
Score = 50.4 bits (119), Expect = 3e-06
Identities = 60/293 (20%), Positives = 112/293 (37%), Gaps = 40/293 (13%)
Query: 7 KTPLLPFREPLNG--GPTFLLKYENLQPG---------------GSFKSRGISHLIKTTM 49
+TP+L E LN G + K E LQ G G+FK RG + +
Sbjct: 28 RTPVLT-SESLNSISGRSLFFKCECLQKGIECRSFYFSVYCGKSGAFKFRGACNAVL--- 83
Query: 50 DSISDPENELAVYXXXXXXXXXXXXXXXXTLKVPCTVIVPKSTKPRMIKKIESAGAKVVI 109
S+ + V +P ++VPK + + G KV+
Sbjct: 84 -SLDAEQAAKGVVTHSSGNHAAALSLAAKIQGIPAYIVVPKGAPKCKVDNVIRYGGKVI- 141
Query: 110 FGDHWKEADTYLREYVMRQS-SYSNTLYVHPFDNPIIWDGHSTMIDEIIEQLAESHTDIN 168
W EA RE + + + ++ +HP+++ I G T+ E++EQ+ E +
Sbjct: 142 ----WSEATMSSREEIASKVLQETGSVLIHPYNDGRIISGQGTIALELLEQIQEIDAIVV 197
Query: 169 DVKGIVCSXXXXXXXXXXXXXXERHGLAGSIPVFAMETDGCDVLSKSLIAGEPVVLDRIS 228
+ G + SI + A E G D ++S +AG+ + L +
Sbjct: 198 PISG---------GGLISGVALAAKSIKPSIRIIAAEPKGADDAAQSKVAGKIITLPVTN 248
Query: 229 SIATSLGSTEICADSFQKAIKFSSKSIV-LDDKNVVDTCLRFFDETSILVEPA 280
+IA L ++ D ++ +V L++ +++ ++ + VEP+
Sbjct: 249 TIADGLRAS--LGDLTWPVVRDLVDDVVTLEECEIIEAMKMCYEILKVSVEPS 299
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.138 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,083,217
Number of Sequences: 60738
Number of extensions: 697913
Number of successful extensions: 1610
Number of sequences better than 1.0e-05: 11
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1580
Number of HSP's gapped (non-prelim): 12
length of query: 322
length of database: 30,389,216
effective HSP length: 106
effective length of query: 216
effective length of database: 23,950,988
effective search space: 5173413408
effective search space used: 5173413408
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)