ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV0631 good R KOG4061 General function prediction only DMQ mono-oxygenase/Ubiquinone biosynthesis protein COQ7/CLK-1/CAT5
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV0631 224890 224183 -236
(236 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR125c [R] KOG4061 DMQ mono-oxygenase/Ubiquinone biosynthesis p... 321 6e-88
SPBC337.15c [R] KOG4061 DMQ mono-oxygenase/Ubiquinone biosynthes... 189 4e-48
Hs7706391 [R] KOG4061 DMQ mono-oxygenase/Ubiquinone biosynthesis... 157 9e-39
7290753 [R] KOG4061 DMQ mono-oxygenase/Ubiquinone biosynthesis p... 155 4e-38
CE01438 [R] KOG4061 DMQ mono-oxygenase/Ubiquinone biosynthesis p... 130 1e-30
>YOR125c [R] KOG4061 DMQ mono-oxygenase/Ubiquinone biosynthesis protein
COQ7/CLK-1/CAT5
Length = 272
Score = 321 bits (822), Expect = 6e-88
Identities = 159/224 (70%), Positives = 189/224 (83%), Gaps = 3/224 (1%)
Query: 13 RQFSVLSTLGNSSNAGEHRAEPNESAELTKFKPMSDAQLAYLDRVVRVDQAGELGANYIY 72
R FSVLS+L + + E E A K + +SDAQ A+LDRV+RVDQAGELGA+YIY
Sbjct: 52 RGFSVLSSLKITEHTSAKHTEKPEHAP--KCQNLSDAQAAFLDRVIRVDQAGELGADYIY 109
Query: 73 AGQFFVLANRYPHLRPVLQHMWDQEIHHHDTFNNLQLKRRVRPSLLTPLWKIGAFAMGSG 132
AGQ+FVLA+RYPHL+PVL+H+WDQEIHHH+TFNNLQLKRRVRPSLLTPLWK GAFAMG+G
Sbjct: 110 AGQYFVLAHRYPHLKPVLKHIWDQEIHHHNTFNNLQLKRRVRPSLLTPLWKAGAFAMGAG 169
Query: 133 TAFLSPEAAMACTEAVETVIGGHYNDQLRCLNNQYELESEDGTKVGQTVELKNLQATIKQ 192
TA +SPEAAMACTEAVETVIGGHYN QLR L NQ+ LE DGTK G + E+K+L +TI+Q
Sbjct: 170 TALISPEAAMACTEAVETVIGGHYNGQLRNLANQFNLERTDGTK-GPSEEIKSLTSTIQQ 228
Query: 193 FRDEELEHLQTAIDYDSHKAVPYILLTEGIKTVCRVAIWAAERV 236
FRD+ELEHL TAI +DS+ AVPY ++TEGIKT+CRVAIW+AER+
Sbjct: 229 FRDDELEHLDTAIKHDSYMAVPYTVITEGIKTICRVAIWSAERI 272
>SPBC337.15c [R] KOG4061 DMQ mono-oxygenase/Ubiquinone biosynthesis protein
COQ7/CLK-1/CAT5
Length = 216
Score = 189 bits (479), Expect = 4e-48
Identities = 97/193 (50%), Positives = 126/193 (65%), Gaps = 11/193 (5%)
Query: 44 KPMSDAQLAYLDRVVRVDQAGELGANYIYAGQFFVLANRYPHLRPVLQHMWDQEIHHHDT 103
K +S+ LD V+RVDQAGELGAN IY GQ F+L P + P +QHMWDQE +H T
Sbjct: 33 KELSEKDSNILDSVIRVDQAGELGANQIYKGQHFILQFTDPKVAPTIQHMWDQEKYHLAT 92
Query: 104 FNNLQLKRRVRPSLLTPLWKIGAFAMGSGTAFLSPEAAMACTEAVETVIGGHYNDQLRCL 163
F+N LK RVRP+ L P W I FA+G+GTA L +AAMACTEAVETVIGGHYNDQLR
Sbjct: 93 FDNYVLKNRVRPTFLRPFWDIAGFALGAGTALLGTKAAMACTEAVETVIGGHYNDQLR-- 150
Query: 164 NNQYELESEDGTKVGQTVELKNLQATIKQFRDEELEHLQTAID-YDSHKAVPYILLTEGI 222
E + E K +++ + +FRD+ELEHL TA++ +++ +A + LLT I
Sbjct: 151 --------ETAHLENKAPEFKEIRSHLAEFRDDELEHLNTAVEGWNAKEAPAHALLTNAI 202
Query: 223 KTVCRVAIWAAER 235
+ C+ AIW +R
Sbjct: 203 QMGCKAAIWMCKR 215
>Hs7706391 [R] KOG4061 DMQ mono-oxygenase/Ubiquinone biosynthesis protein
COQ7/CLK-1/CAT5
Length = 217
Score = 157 bits (398), Expect = 9e-39
Identities = 89/185 (48%), Positives = 114/185 (61%), Gaps = 14/185 (7%)
Query: 52 AYLDRVVRVDQAGELGANYIYAGQFFVLANRYPHLRPVLQHMWDQEIHHHDTFNNLQLKR 111
A +DR++RVD AGE GAN IYAGQ VL + PV+Q MWDQE H FN L +
Sbjct: 47 AAVDRIIRVDHAGEYGANRIYAGQMAVLGRT--SVGPVIQKMWDQEKDHLKKFNELMVMF 104
Query: 112 RVRPSLLTPLWKIGAFAMGSGTAFLSPEAAMACTEAVETVIGGHYNDQLRCLNNQYELES 171
RVRP++L PLW + FA+G+GTA L E AMACT AVE I HYN+Q+R L
Sbjct: 105 RVRPTVLMPLWNVLGFALGAGTALLGKEGAMACTVAVEESIAHHYNNQIR------TLME 158
Query: 172 EDGTKVGQTVELKNLQATIKQFRDEELEHLQTAIDYDSHKAVPYILLTEGIKTVCRVAIW 231
ED K + ++L IK+FRDEELEH +D+D+ A Y +L I+ CRVAI+
Sbjct: 159 EDPEKYEELLQL------IKKFRDEELEHHDIGLDHDAELAPAYAVLKSIIQAGCRVAIY 212
Query: 232 AAERV 236
+ER+
Sbjct: 213 LSERL 217
>7290753 [R] KOG4061 DMQ mono-oxygenase/Ubiquinone biosynthesis protein
COQ7/CLK-1/CAT5
Length = 216
Score = 155 bits (393), Expect = 4e-38
Identities = 90/216 (41%), Positives = 124/216 (56%), Gaps = 18/216 (8%)
Query: 21 LGNSSNAGEHRAEPNESAELTKFKPMSDAQLAYLDRVVRVDQAGELGANYIYAGQFFVLA 80
L +++ G S+E T +P +A D ++RVD AGELGA+ IYAGQ +L
Sbjct: 19 LSSATGGGSAGTTEGGSSETTPLRPRPNA---LTDEIIRVDHAGELGADRIYAGQMAILG 75
Query: 81 NRYPHLRPVLQHMWDQEIHHHDTFNNLQLKRRVRPSLLTPLWKIGAFAMGSGTAFLSPEA 140
N L + HMW+QE H F L + RVRP+++TP+W + F +G+GTA + +A
Sbjct: 76 NG--PLGKTIGHMWEQEKEHRKQFEQLIQQHRVRPTIMTPIWNVAGFVLGAGTALMGEKA 133
Query: 141 AMACTEAVETVIGGHYNDQLRCLNNQYELESEDGTKVGQTVELKNLQATIKQFRDEELEH 200
AMACT AVETVI HYNDQLR + E + D K L ATI +FRDEE EH
Sbjct: 134 AMACTVAVETVIVEHYNDQLRQI---MEAPNPD----------KELLATITKFRDEEQEH 180
Query: 201 LQTAIDYDSHKAVPYILLTEGIKTVCRVAIWAAERV 236
T ID+ + +A Y +TE IK C+ AI ++++
Sbjct: 181 HDTGIDHGAEQAPFYQAMTEVIKFGCKTAIAISKKI 216
>CE01438 [R] KOG4061 DMQ mono-oxygenase/Ubiquinone biosynthesis protein
COQ7/CLK-1/CAT5
Length = 187
Score = 130 bits (328), Expect = 1e-30
Identities = 77/197 (39%), Positives = 114/197 (57%), Gaps = 14/197 (7%)
Query: 40 LTKFKPMSDAQLAYLDRVVRVDQAGELGANYIYAGQFFVLANRYPHLRPVLQHMWDQEIH 99
+T+ + ++ A +++++RVD AGELGA+ IYAGQ VL + V++ MWD+E
Sbjct: 5 ITRGAHTAASRQALIEKIIRVDHAGELGADRIYAGQLAVLQGS--SVGSVIKKMWDEEKE 62
Query: 100 HHDTFNNLQLKRRVRPSLLTPLWKIGAFAMGSGTAFLSPEAAMACTEAVETVIGGHYNDQ 159
H DT L K V ++ +P++ + A+A+G G+A L E AMACT AVE +IG HYNDQ
Sbjct: 63 HLDTMERLAAKHNVPHTVFSPVFSVAAYALGVGSALLGKEGAMACTIAVEELIGQHYNDQ 122
Query: 160 LRCLNNQYELESEDGTKVGQTVELKNLQATIKQFRDEELEHLQTAIDYDSHKAVPYILLT 219
L+ EL ++D K L + + RDEEL H T +++D KA Y L
Sbjct: 123 LK------ELLADD------PETHKELLKILTRLRDEELHHHDTGVEHDGMKAPAYSALK 170
Query: 220 EGIKTVCRVAIWAAERV 236
I+T C+ AI AE++
Sbjct: 171 WIIQTGCKGAIAIAEKI 187
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.320 0.134 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,840,392
Number of Sequences: 60738
Number of extensions: 558647
Number of successful extensions: 1489
Number of sequences better than 1.0e-05: 5
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1472
Number of HSP's gapped (non-prelim): 5
length of query: 236
length of database: 30,389,216
effective HSP length: 103
effective length of query: 133
effective length of database: 24,133,202
effective search space: 3209715866
effective search space used: 3209715866
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)