ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactV0656.1    suspect: Pn  S     KOG3098   Function unknown                                               Uncharacterized conserved protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactV0656.1 232225  232464 80   
         (80 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CE26156 [S] KOG3098 Uncharacterized conserved protein                  28   2.2  
CE06222 [Q] KOG0156 Cytochrome P450 CYP2 subfamily                     26   8.5  
CE05597 [W] KOG3544 Collagens (type IV and type XIII) and relate...    26   8.5  
At2g16390 [L] KOG0390 DNA repair protein SNF2 family                   26   8.5  

>CE26156 [S] KOG3098 Uncharacterized conserved protein
          Length = 433

 Score = 28.1 bits (61), Expect = 2.2
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 37  YKAKFFDGENASGKPLLHLAIGIL-TLGYSMEYYFHLRHH 75
           Y AK++  E+++   +   + GI  TL +    YFHL HH
Sbjct: 362 YIAKYYQNESSTVFSIFRFSSGIASTLLFFAAQYFHLMHH 401


>CE06222 [Q] KOG0156 Cytochrome P450 CYP2 subfamily
          Length = 491

 Score = 26.2 bits (56), Expect = 8.5
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 51 PLLHLAIGILTLGYSMEYYFHLRHHKGG 78
          PLL LA  + T+GY + +Y  +R +  G
Sbjct: 3  PLLILAFFVATVGYLVHFYLKVRKYPKG 30


>CE05597 [W] KOG3544 Collagens (type IV and type XIII) and related proteins
          Length = 427

 Score = 26.2 bits (56), Expect = 8.5
 Identities = 14/28 (50%), Positives = 16/28 (57%)

Query: 22  QGEAAAVKPSGLIGRYKAKFFDGENASG 49
           QGE   V PSG  GR   K  DG++A G
Sbjct: 158 QGEEGPVGPSGPPGRRGRKGADGKSAMG 185


>At2g16390 [L] KOG0390 DNA repair protein SNF2 family
          Length = 888

 Score = 26.2 bits (56), Expect = 8.5
 Identities = 13/45 (28%), Positives = 23/45 (50%), Gaps = 4/45 (8%)

Query: 1   MGSAPNAKRIANVVSFYKSL----PQGEAAAVKPSGLIGRYKAKF 41
           M  AP + +   ++SF +S     PQ +   V P G++  +K +F
Sbjct: 375 MAHAPGSGKTFMIISFMQSFLAKYPQAKPLVVLPKGILPTWKKEF 419


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.319    0.138    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,276,685
Number of Sequences: 60738
Number of extensions: 203298
Number of successful extensions: 342
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 340
Number of HSP's gapped (non-prelim): 4
length of query: 80
length of database: 30,389,216
effective HSP length: 56
effective length of query: 24
effective length of database: 26,987,888
effective search space: 647709312
effective search space used: 647709312
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)