ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactV0673    suspect: LH   S     KOG4620  Function unknown                                               Uncharacterized conserved protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactV0673  238198 237962 -79  
         (79 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YDR379c-a [S] KOG4620 Uncharacterized conserved protein               110   3e-25
SPAC664.12c [S] KOG4620 Uncharacterized conserved protein              79   1e-15

>YDR379c-a [S] KOG4620 Uncharacterized conserved protein
          Length = 79

 Score =  110 bits (276), Expect = 3e-25
 Identities = 50/79 (63%), Positives = 64/79 (80%)

Query: 1  MAKRLSGLQKEVIHLYRQCVRTAHKKPIENRPHFITYIRTEFGKFKGLSRKDFSTIEHLL 60
          M KRLSGLQKEV+HLYR  +RTAH KP EN+ +F+ YI  EFGK++ L RKDF+TIEHLL
Sbjct: 1  MPKRLSGLQKEVLHLYRASIRTAHTKPKENQVNFVNYIHEEFGKYRNLPRKDFTTIEHLL 60

Query: 61 RVGNRRLEMYATPELKDIH 79
          RVGN+++  ++ PEL +IH
Sbjct: 61 RVGNKKIATFSHPELTNIH 79


>SPAC664.12c [S] KOG4620 Uncharacterized conserved protein
          Length = 79

 Score = 78.6 bits (192), Expect = 1e-15
 Identities = 36/75 (48%), Positives = 51/75 (68%)

Query: 5  LSGLQKEVIHLYRQCVRTAHKKPIENRPHFITYIRTEFGKFKGLSRKDFSTIEHLLRVGN 64
          LSGLQ++VIH YR+C+  A  K       ++ ++  EF K + +S++DF  IEHLLRVG 
Sbjct: 3  LSGLQRQVIHFYRRCLHAAKAKEQPYNERWMAFVHQEFRKNQTISKRDFFYIEHLLRVGQ 62

Query: 65 RRLEMYATPELKDIH 79
          R+ E Y+ PE+KDIH
Sbjct: 63 RQYEAYSRPEVKDIH 77


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.326    0.141    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,856,154
Number of Sequences: 60738
Number of extensions: 170896
Number of successful extensions: 460
Number of sequences better than 1.0e-05: 2
Number of HSP's better than  0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 458
Number of HSP's gapped (non-prelim): 2
length of query: 79
length of database: 30,389,216
effective HSP length: 55
effective length of query: 24
effective length of database: 27,048,626
effective search space: 649167024
effective search space used: 649167024
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)