ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV0703 good F KOG2835 Nucleotide transport and metabolism Phosphoribosylamidoimidazole-succinocarboxamide synthase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV0703 249871 248165 -569
(569 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR128c [F] KOG2835 Phosphoribosylamidoimidazole-succinocarboxam... 796 0.0
SPCC1322.13 [F] KOG2835 Phosphoribosylamidoimidazole-succinocarb... 566 e-161
At2g37690 [F] KOG2835 Phosphoribosylamidoimidazole-succinocarbox... 469 e-132
At2g05140 [F] KOG2835 Phosphoribosylamidoimidazole-succinocarbox... 170 6e-42
>YOR128c [F] KOG2835 Phosphoribosylamidoimidazole-succinocarboxamide
synthase
Length = 571
Score = 796 bits (2057), Expect = 0.0
Identities = 405/569 (71%), Positives = 462/569 (81%), Gaps = 1/569 (0%)
Query: 1 MDQRTVGILGGGQLGRMIVEAAHRLNVKTIILDAENSPAKQINALSEHVNGSFAKPEDIK 60
MD RTVGILGGGQLGRMIVEAA+RLN+KT+ILDAENSPAKQI+ ++HVNGSF+ P DI+
Sbjct: 1 MDSRTVGILGGGQLGRMIVEAANRLNIKTVILDAENSPAKQISNSNDHVNGSFSNPLDIE 60
Query: 61 KIASLCDVLTVEIEHVDVPTLKRVQQDHPNLKIYPDPETIALIQDKFVQKQYLIQNKISV 120
K+A CDVLT+EIEHVDVPTLK +Q HP LKIYP PETI LIQDK++QK++LI+N I+V
Sbjct: 61 KLAEKCDVLTIEIEHVDVPTLKNLQVKHPKLKIYPSPETIRLIQDKYIQKEHLIKNGIAV 120
Query: 121 AKSVAVN-SDEESLAKVGFEFGYPFMLKSRTLAYDGRGNFVVKSKESLSEALEVLKDRPL 179
+SV V + E SL VG + G+PF+LKSRTLAYDGRGNFVVK+KE + EALEVLKDRPL
Sbjct: 121 TQSVPVEQASETSLLNVGRDLGFPFVLKSRTLAYDGRGNFVVKNKEMIPEALEVLKDRPL 180
Query: 180 YAEKWAPFVKELAVMVVRSPEGKVFSYTTVETIHQDNICHLCYAPARVPDSVQLKAKLLA 239
YAEKWAPF KELAVM+VRS G VFSY VETIH+DNIC LCYAPARVPDSVQLKAKLLA
Sbjct: 181 YAEKWAPFTKELAVMIVRSVNGLVFSYPIVETIHKDNICDLCYAPARVPDSVQLKAKLLA 240
Query: 240 EHXXXXXXXXXXXXVEMFYLEDGELLINEIAPRPHNSGHYTIDACVTSQFEAHIRSILNL 299
E+ VEMFYLE GELLINEIAPRPHNSGHYTIDACVTSQFEAH+RSIL+L
Sbjct: 241 ENAIKSFPGCGIFGVEMFYLETGELLINEIAPRPHNSGHYTIDACVTSQFEAHLRSILDL 300
Query: 300 PLPEGFSALSTTNTNAIMLNVLGDHAEKNKELQICERALSTPGASVYLYGKESRPQRKMG 359
P+P+ F++ ST TNAIMLNVLGD K+KEL+ CERAL+TPG+SVYLYGKESRP RK+G
Sbjct: 301 PMPKNFTSFSTITTNAIMLNVLGDKHTKDKELETCERALATPGSSVYLYGKESRPNRKVG 360
Query: 360 HINIIGSSMSECERKLKYIMYADAAYEHIATREFTLPGASMRPLISIIMGSDSDLPVMSK 419
HINII SSM+ECE++L YI I+ + A ++PL+ IIMGSDSDLPVMS
Sbjct: 361 HINIIASSMAECEQRLNYITGRTDIPIKISVAQKLDLEAMVKPLVGIIMGSDSDLPVMSA 420
Query: 420 ACDILNDFNIQYEVTIVSAHRTPHRMSKFAIEXXXXXXXXXXXXXXXXXHLPGMVAAMTP 479
AC +L DF + +EVTIVSAHRTPHRMS +AI HLPGMVAAMTP
Sbjct: 421 ACAVLKDFGVPFEVTIVSAHRTPHRMSAYAISASKRGIKTIIAGAGGAAHLPGMVAAMTP 480
Query: 480 LPVIGVPVKGSTLDGVDSLHSIVQMPRGVPVATVAINNSTNAALLAIRILGAYDPVYFSK 539
LPVIGVPVKGS LDGVDSLHSIVQMPRGVPVATVAINNSTNAALLA+R+LGAYD Y +K
Sbjct: 481 LPVIGVPVKGSCLDGVDSLHSIVQMPRGVPVATVAINNSTNAALLAVRLLGAYDSSYTTK 540
Query: 540 MQQFLQKQEEEVLTKAAKLETIGYQEYLK 568
M+QFL KQEEEVL KA KLET+GY+ YL+
Sbjct: 541 MEQFLLKQEEEVLVKAQKLETVGYEAYLE 569
>SPCC1322.13 [F] KOG2835 Phosphoribosylamidoimidazole-succinocarboxamide
synthase
Length = 552
Score = 566 bits (1459), Expect = e-161
Identities = 302/567 (53%), Positives = 388/567 (68%), Gaps = 21/567 (3%)
Query: 2 DQRTVGILGGGQLGRMIVEAAHRLNVKTIILDAENSPAKQINALSEHVNGSFAKPEDIKK 61
+++ VGILGGGQLGRM+VEAAHRLN+K IILDA NSPAKQI+ EH++ SF P+ I +
Sbjct: 3 EKQVVGILGGGQLGRMMVEAAHRLNIKCIILDAANSPAKQIDGGREHIDASFTDPDAIVE 62
Query: 62 IASLCDVLTVEIEHVDVPTLKRVQQDHPNLKIYPDPETIALIQDKFVQKQYLIQNKISVA 121
++ C +LT EIEH++ L V + ++ + P P T+ IQDK++QKQ+L KI++
Sbjct: 63 LSKKCTLLTTEIEHINTDALAAVTK---SVAVEPSPATLRCIQDKYLQKQHLQVFKIALP 119
Query: 122 KSVAVNSDEESLAKVGFEFGYPFMLKSRTLAYDGRGNFVVKSKESLSEALEVLKDRPLYA 181
+ D+ES+ K G EFGYPF+LKS+TLAYDGRGN+VV + A++ L DRPLY
Sbjct: 120 EFCDA-PDQESVEKAGQEFGYPFVLKSKTLAYDGRGNYVVHQPSEIPTAIKALGDRPLYV 178
Query: 182 EKWAPFVKELAVMVVRSPEGKVFSYTTVETIHQDNICHLCYAPARVPDSVQLKAKLLAEH 241
EK+ PF E+AVMVVRS +GKV++Y T ETI +DN+CHL YAPAR+P S+Q +A+ LA
Sbjct: 179 EKFVPFSMEIAVMVVRSLDGKVYAYPTTETIQKDNVCHLVYAPARLPFSIQQRAQTLAMD 238
Query: 242 XXXXXXXXXXXXVEMFYLEDGE-LLINEIAPRPHNSGHYTIDACVTSQFEAHIRSILNLP 300
VEMF L+DGE +L+NEIAPRPHNSGHYTI+AC TSQFEAH+R+I LP
Sbjct: 239 AVRTFEGAGIYGVEMFVLQDGETILLNEIAPRPHNSGHYTIEACPTSQFEAHLRAICGLP 298
Query: 301 LPEGFSALSTTNTNAIMLNVLGDHAEKNKELQICERALSTPGASVYLYGK-ESRPQRKMG 359
E + LST+ T+A+M+N+LG + + +I +R+LS PGA+++LYGK ESR RKMG
Sbjct: 299 FSEINTQLSTSTTHALMVNILGTD-DPDYVSKIAKRSLSIPGATLHLYGKAESRKGRKMG 357
Query: 360 HINIIGSSMSECERKLKYIMYADAAYEHIATREFTLPGASMRPLISIIMGSDSDLPVMSK 419
H+ II S ECER+ + ++ E P++ IIMGSDSDL M
Sbjct: 358 HVTIISDSPQECERRYQMLLDVKDPVES--------------PVVGIIMGSDSDLSKMKD 403
Query: 420 ACDILNDFNIQYEVTIVSAHRTPHRMSKFAIEXXXXXXXXXXXXXXXXXHLPGMVAAMTP 479
A IL++F + YE+TIVSAHRTP RM +A HLPGMVAAMTP
Sbjct: 404 AAVILDEFKVPYELTIVSAHRTPDRMVTYARTAASRGLRVIIAGAGGAAHLPGMVAAMTP 463
Query: 480 LPVIGVPVKGSTLDGVDSLHSIVQMPRGVPVATVAINNSTNAALLAIRILGAYDPVYFSK 539
LPVIGVPVKGSTLDGVDSLHSIVQMPRGVPVATVAINNS NA +LA RIL + P +
Sbjct: 464 LPVIGVPVKGSTLDGVDSLHSIVQMPRGVPVATVAINNSQNAGILACRILATFQPSLLAA 523
Query: 540 MQQFLQKQEEEVLTKAAKLETIGYQEY 566
M+ F+ +E VL KA KLE +G++ Y
Sbjct: 524 MESFMDNMKEIVLEKADKLEKVGWKNY 550
>At2g37690 [F] KOG2835 Phosphoribosylamidoimidazole-succinocarboxamide
synthase
Length = 645
Score = 469 bits (1208), Expect = e-132
Identities = 268/581 (46%), Positives = 360/581 (61%), Gaps = 35/581 (6%)
Query: 1 MDQRTVGILGGGQLGRMIVEAAHRLNVKTIILDAENSPAKQINALS---EHVNGSFAKPE 57
+ ++ VG+LGGGQLGRM+ +AA +L +K +ILD P+K +A + H+ SF
Sbjct: 88 VSEKIVGVLGGGQLGRMLCQAASQLAIKVMILD----PSKNCSASALSYGHMVDSFDDSA 143
Query: 58 DIKKIASLCDVLTVEIEHVDVPTLKRVQQDHPNLKIYPDPETIALIQDKFVQKQYLIQNK 117
+++ A C VLTVEIEHVDV TL+++++ + P TI +IQDK++QK + Q+
Sbjct: 144 TVEEFAKRCGVLTVEIEHVDVDTLEKLEKQ--GVDCQPKASTIRIIQDKYMQKVHFSQHG 201
Query: 118 ISVAKSVAVNSDEESLAKVGFEFGYPFMLKSRTLAYDGRGNFVVKSKESLSEALEVLK-- 175
I + + + + SD E K G FGYP M+KS+ LAYDGRGN V +++ LS A+ L
Sbjct: 202 IPLPEFMEI-SDIEGARKAGELFGYPLMIKSKRLAYDGRGNAVANNQDELSSAVTALGGF 260
Query: 176 DRPLYAEKWAPFVKELAVMVVRSPEGKVFSYTTVETIHQDNICHLCYAPARVPDSVQLKA 235
R LY EKWAPFVKELAV+V R +G + Y VETIH+DNICH+ APA VP + A
Sbjct: 261 SRGLYIEKWAPFVKELAVIVARGRDGSMVCYPVVETIHRDNICHIVKAPADVPWKINKLA 320
Query: 236 KLLAEHXXXXXXXXXXXXVEMFYLEDGELLINEIAPRPHNSGHYTIDACVTSQFEAHIRS 295
+A+ VE+F ED ++L+NE+APRPHNSGH TI+ C TSQFE H+R+
Sbjct: 321 TDVAQKAVGSLEGAGVFAVELFLTEDSQILLNEVAPRPHNSGHQTIECCYTSQFEQHLRA 380
Query: 296 ILNLPLPEGFSALSTTNTNAIMLNVLGDHAEKNKEL------QICERALSTPGASVYLYG 349
++ LPL + S +IM N+LG+ + E ++ RAL PGASV+ Y
Sbjct: 381 VVGLPLGDP----SMRTPASIMYNILGEDDVIDGEAGFKLAHRLIARALCIPGASVHWYD 436
Query: 350 K-ESRPQRKMGHINIIGSSMSECERKLKYIMYADAAYEHIATREFTLPGASMRPLISIIM 408
K E R QRKMGHI ++G SM E++L+ I+ + H P ++IIM
Sbjct: 437 KPEMRKQRKMGHITLVGQSMGILEQRLQCILSEQSHQVHET------------PRVAIIM 484
Query: 409 GSDSDLPVMSKACDILNDFNIQYEVTIVSAHRTPHRMSKFAIEXXXXXXXXXXXXXXXXX 468
GSD+DLPVM A IL+ F + +EV IVSAHRTP M +A
Sbjct: 485 GSDTDLPVMKDAAKILDLFGVTHEVKIVSAHRTPEMMYTYATSAHSRGVQVIIAGAGGAA 544
Query: 469 HLPGMVAAMTPLPVIGVPVKGSTLDGVDSLHSIVQMPRGVPVATVAINNSTNAALLAIRI 528
HLPGMVA++TPLPVIGVPV+ + LDGVDSL SIVQMPRGVPVATVAINN+TNAALLA+R+
Sbjct: 545 HLPGMVASLTPLPVIGVPVRATRLDGVDSLLSIVQMPRGVPVATVAINNATNAALLAVRM 604
Query: 529 LGAYDPVYFSKMQQFLQKQEEEVLTKAAKLETIGYQEYLKK 569
LG D S+M+Q+ + +E L K KLET G++ YL +
Sbjct: 605 LGISDTDLVSRMRQYQEDMRDENLNKGEKLETEGWESYLNQ 645
>At2g05140 [F] KOG2835 Phosphoribosylamidoimidazole-succinocarboxamide
synthase
Length = 162
Score = 170 bits (430), Expect = 6e-42
Identities = 90/162 (55%), Positives = 110/162 (67%)
Query: 408 MGSDSDLPVMSKACDILNDFNIQYEVTIVSAHRTPHRMSKFAIEXXXXXXXXXXXXXXXX 467
MGSD+DL VM A IL+ F + +EV IVSAHRTP M +A
Sbjct: 1 MGSDTDLLVMKDAAKILDMFGVTHEVKIVSAHRTPEMMYTYATSAHSRGVQVIIAGAGGA 60
Query: 468 XHLPGMVAAMTPLPVIGVPVKGSTLDGVDSLHSIVQMPRGVPVATVAINNSTNAALLAIR 527
HLPGMVA++TPLPVIGVPV+ + LDGVDSL SIVQMPRGVPVATVAINN+TNAALLA+R
Sbjct: 61 AHLPGMVASLTPLPVIGVPVQATRLDGVDSLLSIVQMPRGVPVATVAINNATNAALLAVR 120
Query: 528 ILGAYDPVYFSKMQQFLQKQEEEVLTKAAKLETIGYQEYLKK 569
+LG D S+M+Q+ + +E L K KLET G++ YL +
Sbjct: 121 MLGISDNDLVSRMRQYQEDMRDENLNKGEKLETQGWESYLNQ 162
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.134 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,986,713
Number of Sequences: 60738
Number of extensions: 1237730
Number of successful extensions: 3370
Number of sequences better than 1.0e-05: 4
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3350
Number of HSP's gapped (non-prelim): 4
length of query: 569
length of database: 30,389,216
effective HSP length: 112
effective length of query: 457
effective length of database: 23,586,560
effective search space: 10779057920
effective search space used: 10779057920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)