ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV0745 good J KOG3449 Translation, ribosomal structure and biogenesis 60S acidic ribosomal protein P2
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV0745 263645 263971 109
(109 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDR382w [J] KOG3449 60S acidic ribosomal protein P2 96 1e-20
SPBC23G7.15c [J] KOG3449 60S acidic ribosomal protein P2 90 4e-19
SPBP8B7.06 [J] KOG3449 60S acidic ribosomal protein P2 90 6e-19
SPAC1071.08 [J] KOG3449 60S acidic ribosomal protein P2 89 8e-19
YOL039w [J] KOG3449 60S acidic ribosomal protein P2 89 1e-18
Hs4506671 [J] KOG3449 60S acidic ribosomal protein P2 84 4e-17
At2g27710 [J] KOG3449 60S acidic ribosomal protein P2 73 6e-14
CE22694 [J] KOG3449 60S acidic ribosomal protein P2 73 7e-14
At2g27720 [J] KOG3449 60S acidic ribosomal protein P2 70 5e-13
At3g44590 [J] KOG3449 60S acidic ribosomal protein P2 68 2e-12
7302907 [J] KOG3449 60S acidic ribosomal protein P2 68 2e-12
CE08616 [J] KOG3449 60S acidic ribosomal protein P2 67 4e-12
At3g28500 [J] KOG3449 60S acidic ribosomal protein P2 57 6e-09
Hs20555798 [J] KOG3449 60S acidic ribosomal protein P2 55 1e-08
Hs22066175_2 [J] KOG3449 60S acidic ribosomal protein P2 55 2e-08
At5g40040 [J] KOG3449 60S acidic ribosomal protein P2 54 3e-08
>YDR382w [J] KOG3449 60S acidic ribosomal protein P2
Length = 110
Score = 95.5 bits (236), Expect = 1e-20
Identities = 49/110 (44%), Positives = 65/110 (58%), Gaps = 1/110 (0%)
Query: 1 MKYLAAYLLIAQGGVESPSATEIKNVLEAVGVEAEDSKIQALLTSLEGK-TIQELVAEGQ 59
MKYLAAYLL+ QGG +PSA +IK V+E+VG E ++++I LL+SLEGK +++E++AEGQ
Sbjct: 1 MKYLAAYLLLVQGGNAAPSAADIKAVVESVGAEVDEARINELLSSLEGKGSLEEIIAEGQ 60
Query: 60 TKLASVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 109
K A+VP DDDMGFGLFD
Sbjct: 61 KKFATVPTGGASSAAAGAAGAAAGGDAAEEEKEEEAKEESDDDMGFGLFD 110
>SPBC23G7.15c [J] KOG3449 60S acidic ribosomal protein P2
Length = 110
Score = 90.1 bits (222), Expect = 4e-19
Identities = 45/110 (40%), Positives = 63/110 (56%), Gaps = 1/110 (0%)
Query: 1 MKYLAAYLLIAQGGVESPSATEIKNVLEAVGVEAEDSKIQALLTSLEGKTIQELVAEGQT 60
MKYLAAYLL+ GG +SPSA++I++VL VG+EAE ++++L++ L GK I+EL+A G
Sbjct: 1 MKYLAAYLLLTVGGKQSPSASDIESVLSTVGIEAEAERVESLISELNGKNIEELIAAGNE 60
Query: 61 KLASVPXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 109
KL++VP D+DMGFGLFD
Sbjct: 61 KLSTVPSAGAVATPAAGGAAGAEATSAAEEAKEEEAAEESDEDMGFGLFD 110
>SPBP8B7.06 [J] KOG3449 60S acidic ribosomal protein P2
Length = 110
Score = 89.7 bits (221), Expect = 6e-19
Identities = 47/110 (42%), Positives = 60/110 (53%), Gaps = 1/110 (0%)
Query: 1 MKYLAAYLLIAQGGVESPSATEIKNVLEAVGVEAEDSKIQALLTSLEGKTIQELVAEGQT 60
MKYLAAYLL+ GG +SPSA++I++VL VG+EAE +I+ L+ L GK I EL+A G
Sbjct: 1 MKYLAAYLLLTVGGKDSPSASDIESVLSTVGIEAESERIETLINELNGKDIDELIAAGNE 60
Query: 61 KLASVPXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 109
KLA+VP D+DMGFGLFD
Sbjct: 61 KLATVPTGGAASAAPAAAAGGAAPAAEEAAKEEAKEEEESDEDMGFGLFD 110
>SPAC1071.08 [J] KOG3449 60S acidic ribosomal protein P2
Length = 110
Score = 89.4 bits (220), Expect = 8e-19
Identities = 46/110 (41%), Positives = 61/110 (54%), Gaps = 1/110 (0%)
Query: 1 MKYLAAYLLIAQGGVESPSATEIKNVLEAVGVEAEDSKIQALLTSLEGKTIQELVAEGQT 60
MKYLAAYLL+ GG SPSA++I++VL VG+E+E +++AL+ L+GK I EL+A G
Sbjct: 1 MKYLAAYLLLTVGGKNSPSASDIESVLSTVGIESESERVEALIKELDGKDIDELIAAGNE 60
Query: 61 KLASVPXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 109
KLA+VP D+DMGFGLFD
Sbjct: 61 KLATVPSGGAAAAAAPAAAGGAAPAAEEAAKEEAKEEEESDEDMGFGLFD 110
>YOL039w [J] KOG3449 60S acidic ribosomal protein P2
Length = 106
Score = 88.6 bits (218), Expect = 1e-18
Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 1 MKYLAAYLLIAQGGVESPSATEIKNVLEAVGVEAEDSKIQALLTSLEGKTIQELVAEGQT 60
MKYLAAYLL+ G +P AT+IK +LE+VG+E ED K+ ++L++LEGK++ EL+ EG
Sbjct: 1 MKYLAAYLLLNAAG-NTPDATKIKAILESVGIEIEDEKVSSVLSALEGKSVDELITEGNE 59
Query: 61 KLASVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 109
KLA+VP DDDMGFGLFD
Sbjct: 60 KLAAVP--AAGPASAGGAAAASGDAAAEEEKEEEAAEESDDDMGFGLFD 106
>Hs4506671 [J] KOG3449 60S acidic ribosomal protein P2
Length = 115
Score = 83.6 bits (205), Expect = 4e-17
Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 6/115 (5%)
Query: 1 MKYLAAYLLIAQGGVESPSATEIKNVLEAVGVEAEDSKIQALLTSLEGKTIQELVAEGQT 60
M+Y+A+YLL A GG SPSA +IK +L++VG+EA+D ++ +++ L GK I++++A+G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 61 KLASVPXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXDDDMGFGLFD 109
KLASVP DDDMGFGLFD
Sbjct: 61 KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>At2g27710 [J] KOG3449 60S acidic ribosomal protein P2
Length = 115
Score = 73.2 bits (178), Expect = 6e-14
Identities = 42/115 (36%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 1 MKYLAAYLLIAQGGVESPSATEIKNVLEAVGVEAEDSKIQALLTSLEGKTIQELVAEGQT 60
MK +AAYLL G SP++ +IK +L +VG E EDS+I+ LL ++GK + EL+A G+
Sbjct: 1 MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60
Query: 61 KLASVPX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 109
KLASVP DDDMGF LF+
Sbjct: 61 KLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSLFE 115
>CE22694 [J] KOG3449 60S acidic ribosomal protein P2
Length = 110
Score = 72.8 bits (177), Expect = 7e-14
Identities = 39/110 (35%), Positives = 55/110 (49%), Gaps = 1/110 (0%)
Query: 1 MKYLAAYLLIAQGGVESPSATEIKNVLEAVGVEAEDSKIQALLTSLEGKTIQELVAEGQT 60
M+Y++AYLL GG +P ++KN+L AVGV+A+ + +++ L GKT++EL+AEG
Sbjct: 1 MRYVSAYLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSA 60
Query: 61 KLASVPXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 109
L SV DDDMGFGLFD
Sbjct: 61 GLVSVSGGAAPAAAAAPAAGGAAPAADSKPAKKEEPKEESDDDMGFGLFD 110
>At2g27720 [J] KOG3449 60S acidic ribosomal protein P2
Length = 115
Score = 70.1 bits (170), Expect = 5e-13
Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 1 MKYLAAYLLIAQGGVESPSATEIKNVLEAVGVEAEDSKIQALLTSLEGKTIQELVAEGQT 60
MK +AA+LL G SP+ +IK++L +VG E EDS+I+ LL ++GK + EL+A G+
Sbjct: 1 MKVVAAFLLAVLSGKASPTTGDIKDILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60
Query: 61 KLASVPX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 109
KLASVP DDDMGF LF+
Sbjct: 61 KLASVPSGGGGGVAVASATSGGGGGGGAPAAESKKEEKKEEKEESDDDMGFSLFE 115
>At3g44590 [J] KOG3449 60S acidic ribosomal protein P2
Length = 111
Score = 68.2 bits (165), Expect = 2e-12
Identities = 40/111 (36%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Query: 1 MKYLAAYLLIAQGGVESPSATEIKNVLEAVGVEAEDSKIQALLTSLEGKTIQELVAEGQT 60
MK AA+LL GG +PSA IK+++ AVG + + I+ LL + GK I EL+A G+
Sbjct: 1 MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGRE 60
Query: 61 KLASVPX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 109
KLASVP DDDMGF LF+
Sbjct: 61 KLASVPSGGGVAVSAAPSSGGGGAAAPAEKKEAKKEEKEESDDDMGFSLFE 111
>7302907 [J] KOG3449 60S acidic ribosomal protein P2
Length = 113
Score = 68.2 bits (165), Expect = 2e-12
Identities = 35/113 (30%), Positives = 57/113 (49%), Gaps = 4/113 (3%)
Query: 1 MKYLAAYLLIAQGGVESPSATEIKNVLEAVGVEAEDSKIQALLTSLEGKTIQELVAEGQT 60
M+Y+AAYLL GG +SP+ ++++ +L +VGVE + ++ ++ L GK+I +L+ EG+
Sbjct: 1 MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60
Query: 61 KLASVP----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 109
KL+S+P DDDMGF LF+
Sbjct: 61 KLSSMPVGGGGAVAAADAAPAAAAGGDKKEAKKEEKKEESESEDDDMGFALFE 113
>CE08616 [J] KOG3449 60S acidic ribosomal protein P2
Length = 136
Score = 67.0 bits (162), Expect = 4e-12
Identities = 32/66 (48%), Positives = 47/66 (70%)
Query: 1 MKYLAAYLLIAQGGVESPSATEIKNVLEAVGVEAEDSKIQALLTSLEGKTIQELVAEGQT 60
MKYL AYLL GG SPSA ++ VLEA G++ + +++ +L+GKTI E++A+G+
Sbjct: 1 MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60
Query: 61 KLASVP 66
KL+SVP
Sbjct: 61 KLSSVP 66
>At3g28500 [J] KOG3449 60S acidic ribosomal protein P2
Length = 115
Score = 56.6 bits (135), Expect = 6e-09
Identities = 24/65 (36%), Positives = 46/65 (69%)
Query: 1 MKYLAAYLLIAQGGVESPSATEIKNVLEAVGVEAEDSKIQALLTSLEGKTIQELVAEGQT 60
MK +AA+LL GG E+P++ ++K +LE+VG E +++KI L + ++ + EL+A G+
Sbjct: 1 MKVIAAFLLAKLGGNENPTSNDLKKILESVGAEIDETKIDLLFSLIKDHDVTELIAAGRE 60
Query: 61 KLASV 65
K++++
Sbjct: 61 KMSAL 65
>Hs20555798 [J] KOG3449 60S acidic ribosomal protein P2
Length = 93
Score = 55.5 bits (132), Expect = 1e-08
Identities = 28/66 (42%), Positives = 44/66 (66%)
Query: 1 MKYLAAYLLIAQGGVESPSATEIKNVLEAVGVEAEDSKIQALLTSLEGKTIQELVAEGQT 60
M YL +YLL + S SA +IK +L+ VG+EA D + +++ L GK I++++A+G
Sbjct: 1 MVYLTSYLLPSLMSNTSLSAKDIKKILDRVGMEATDDWLNKVISELNGKNIEDIIAQGIG 60
Query: 61 KLASVP 66
+LASVP
Sbjct: 61 ELASVP 66
>Hs22066175_2 [J] KOG3449 60S acidic ribosomal protein P2
Length = 72
Score = 55.1 bits (131), Expect = 2e-08
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 19/89 (21%)
Query: 20 ATEIKNVLEAVGVEAEDSKIQALLTSLEGKTIQELVAEGQTKLASVPXXXXXXXXXXXXX 79
A +IK +L++VG+EA+D ++ +++ L GK+I++++A+G K+ASVP
Sbjct: 2 AKDIKRILDSVGIEADDDRLNEVISELNGKSIEDVIAQGIGKVASVP------------- 48
Query: 80 XXXXXXXXXXXXXXXXXXXXDDDMGFGLF 108
DDDMGFGLF
Sbjct: 49 ------AGEDEEEEEVSKESDDDMGFGLF 71
>At5g40040 [J] KOG3449 60S acidic ribosomal protein P2
Length = 114
Score = 54.3 bits (129), Expect = 3e-08
Identities = 24/65 (36%), Positives = 42/65 (63%)
Query: 1 MKYLAAYLLIAQGGVESPSATEIKNVLEAVGVEAEDSKIQALLTSLEGKTIQELVAEGQT 60
MK +AAYLL G E+PS ++K ++E+VG E + KI + ++ + + EL+A G+
Sbjct: 1 MKVVAAYLLAKLSGNENPSVADLKKIVESVGAEIDQEKIDLFFSLIKDRDVTELIAVGRE 60
Query: 61 KLASV 65
K+A++
Sbjct: 61 KMAAL 65
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.311 0.131 0.341
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,669,688
Number of Sequences: 60738
Number of extensions: 80143
Number of successful extensions: 316
Number of sequences better than 1.0e-05: 16
Number of HSP's better than 0.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 285
Number of HSP's gapped (non-prelim): 18
length of query: 109
length of database: 30,389,216
effective HSP length: 85
effective length of query: 24
effective length of database: 25,226,486
effective search space: 605435664
effective search space used: 605435664
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)