ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV0902 good J KOG2509 Translation, ribosomal structure and biogenesis Seryl-tRNA synthetase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV0902 314615 313284 -444
(444 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YHR011w [J] KOG2509 Seryl-tRNA synthetase 526 e-149
At1g11870 [J] KOG2509 Seryl-tRNA synthetase 275 1e-73
SPAC25B8.06c [J] KOG2509 Seryl-tRNA synthetase 268 2e-71
Hs8923421 [J] KOG2509 Seryl-tRNA synthetase 257 3e-68
7300003 [J] KOG2509 Seryl-tRNA synthetase 238 1e-62
ECU04g0750 [J] KOG2509 Seryl-tRNA synthetase 183 4e-46
At5g27470 [J] KOG2509 Seryl-tRNA synthetase 183 4e-46
CE25136 [J] KOG2509 Seryl-tRNA synthetase 182 9e-46
SPAC29A4.15 [J] KOG2509 Seryl-tRNA synthetase 173 4e-43
Hs16306548 [J] KOG2509 Seryl-tRNA synthetase 159 1e-38
CE05445 [J] KOG2509 Seryl-tRNA synthetase 156 5e-38
7295855 [J] KOG2509 Seryl-tRNA synthetase 144 3e-34
YDR023w [J] KOG2509 Seryl-tRNA synthetase 135 9e-32
>YHR011w [J] KOG2509 Seryl-tRNA synthetase
Length = 446
Score = 526 bits (1355), Expect = e-149
Identities = 260/447 (58%), Positives = 337/447 (75%), Gaps = 4/447 (0%)
Query: 1 MVTKRLFHSIGRLRTVKKPQFNVKYMISKLDEFSDSIQARELVDGEELQISLKMLPELYQ 60
M+ +RLF R +KKPQF+VK +I + ++ SIQ REL++ + + SL++L E YQ
Sbjct: 1 MIIRRLFSISNRSFFLKKPQFDVKKIIEMIPQYQTSIQNRELIEADSIIRSLQLLGERYQ 60
Query: 61 KSRVADHTIANLQHSRKTIEAQVKQDKTRARELGSELKSLKKQYQDLLKTQREVKDQITE 120
+ D IA++Q RK+IEAQ+K+DKT+ E + LK+LK+QY D E+K +I E
Sbjct: 61 NIKEIDKVIADIQIQRKSIEAQIKKDKTKITEYSAALKALKEQYNDQNSKSSELKKKILE 120
Query: 121 VCGSLPNLIHPSVPKTSSPIIDQWINKQAQYKPDERFEHLKIMVNKGMVDFETASNVTGT 180
C SLPN + P+VP +P I+QWIN +K E H+ IM+ K M+D +TASNVTG
Sbjct: 121 TCKSLPNTLDPTVP-LDAPQIEQWINPLKTHKTSEAQAHVDIMLKKNMLDLQTASNVTGM 179
Query: 181 SWYYLCNDGARLEHALVQYATTKARKANFNLVIPPSVVRNEVIDACGFRPRDTNNEQQIY 240
SWYYL NDGARLE ALV YA KA + F+ +PPS+ + E+IDACGF PRD NNE+QIY
Sbjct: 180 SWYYLLNDGARLEQALVAYALKKANENGFSSCVPPSITKKELIDACGFNPRDMNNERQIY 239
Query: 241 RLSDTDLGLTATAEIALAGMGLDSILDLSSGP--KKICGVNRAYRAEAGASGKDTKGLYR 298
L DT+LGL ATAEI LAG+G + +L+L+SG KK+ GV+R YRAEAGA GKDTKGLYR
Sbjct: 240 ALQDTNLGLVATAEIPLAGLGANKVLELNSGECSKKLVGVSRCYRAEAGARGKDTKGLYR 299
Query: 299 VHEFTKVELFVWAKPEQSDQILEELKQFQIDIVRELGLSAQVLNMPSNDLGSPAYKKYDI 358
VHEFTKVELF W+KPE S ++LEE+KQFQI +V ELG+ A+VLNMPSNDLG+PA+KKYDI
Sbjct: 300 VHEFTKVELFCWSKPETSAKVLEEIKQFQISVVEELGIPAKVLNMPSNDLGNPAFKKYDI 359
Query: 359 EAWMPGRGSFGEITSTSNCTDFQSRRMHTRFRNEE-GELEYAHTLNGTAMAVPRVIVALV 417
EAWMPGRG FGEI+S SNCTDFQSRR++T++R++ G+LEY HTLNGTAMA+PRVIVALV
Sbjct: 360 EAWMPGRGKFGEISSASNCTDFQSRRLNTKYRDDNTGKLEYVHTLNGTAMAIPRVIVALV 419
Query: 418 ENNYDPVSDTISIPQALQPYLDGMEFM 444
EN YDP + IS+P+ L+ +++G ++
Sbjct: 420 ENFYDPSTGKISVPECLREFMNGQRYI 446
>At1g11870 [J] KOG2509 Seryl-tRNA synthetase
Length = 512
Score = 275 bits (702), Expect = 1e-73
Identities = 151/411 (36%), Positives = 242/411 (58%), Gaps = 21/411 (5%)
Query: 51 SLKMLPELYQKSRVADHTIANLQHSRKTIEAQVKQ--DKTRARELGSELKSLKKQYQDLL 108
+L+ + +LY+ + L+ R + ++K + + L E K+LK+ L
Sbjct: 101 NLEAVLQLYENMVNLQKEVERLREERNNVAKKMKGKLEPSERERLVEEGKNLKESLVTLE 160
Query: 109 KTQREVKDQITEVCGSLPNLIHPSVPK--TSSPIIDQWINKQAQYKPDERFEHLKIMVNK 166
+ ++KD++ V S+PN+ HP VP S I Q + ++ + +HL++ +
Sbjct: 161 EDLVKLKDELQHVAQSIPNMTHPDVPVGGEDSSAIRQEVGSPREFSFPIK-DHLQLGKDL 219
Query: 167 GMVDFETASNVTGTSWYYLCNDGARLEHALVQYATTKARKANFNLVIPPSVVRNEVIDAC 226
++DF++A+ V+G+ ++YL N+ LE AL+ + ++ K + + P +VR+ +++ C
Sbjct: 220 DLIDFDSAAEVSGSKFFYLKNEAVLLEMALLNWTLSQVMKKGYTPLTTPEIVRSSIVEKC 279
Query: 227 GFRPRDTNNEQQIYRLSDTDLGLTATAEIALAGMGLDSILDLSSGPKKICGVNRAYRAEA 286
GF+PR N Q+Y + TD L TAEI + G+ +DSIL S+ P K + +R EA
Sbjct: 280 GFQPRGDNT--QVYSIDGTDQCLIGTAEIPVGGIHMDSILLESALPLKYIAFSHCFRTEA 337
Query: 287 GASGKDTKGLYRVHEFTKVELFVWAKPEQSDQILEELKQFQIDIVRELGLSAQVLNMPSN 346
GA+G TKGLYRVH+F+K E+FV +PE S+ +EL Q + D+ LGL + L+M +
Sbjct: 338 GAAGAATKGLYRVHQFSKAEMFVICQPEDSESFHQELIQIEEDLFTSLGLHFKTLDMATA 397
Query: 347 DLGSPAYKKYDIEAWMPGRGSFGEITSTSNCTDFQSRRMHTRFRNEE------------- 393
DLG+PAY+K+DIEAWMPG G FGEI+S SNCTD+QSRR+ R+R E
Sbjct: 398 DLGAPAYRKFDIEAWMPGLGRFGEISSASNCTDYQSRRLGIRYRPSEPPQTGPKKGKANL 457
Query: 394 GELEYAHTLNGTAMAVPRVIVALVENNYDPVSDTISIPQALQPYLDGMEFM 444
++ HTLN TA AVPR++V L+E NY ++ IP+ L+P++ G+E +
Sbjct: 458 PATKFVHTLNATACAVPRMMVCLLE-NYQQEDGSVVIPEPLRPFMGGIELI 507
>SPAC25B8.06c [J] KOG2509 Seryl-tRNA synthetase
Length = 454
Score = 268 bits (684), Expect = 2e-71
Identities = 154/375 (41%), Positives = 228/375 (60%), Gaps = 18/375 (4%)
Query: 76 RKTIEAQVKQ--DKTRARELGSELKSLKKQYQDLLKTQREVKDQITEVCGSLPNLIHPSV 133
+K I Q+++ D +L +E K LKK+ ++ K +V + + + C ++PN P+V
Sbjct: 77 KKEITLQIERCSDPNERGKLVNEAKGLKKKTEEYNKIISKVTNDLYQYCLAVPNTTLPTV 136
Query: 134 P--KTSSPIIDQWINKQAQYKPDERFEHLKIMVNKGMVDFETASNVTGTSWYYLCNDGAR 191
P ++ Q I K +HL+I N+G ++ E A+ +G S+ Y D A
Sbjct: 137 PVGPEDKAVVVQKIGSPLVKKTGSLKDHLQI-ANEG-INLEDAAQASGHSFCYTTGDIAL 194
Query: 192 LEHALVQYATTKARKANFNLVIPPSVVRNEVIDACGFRPRDTNNEQQIYRL--------S 243
LE A+ YA A + VIPP++VR ++ ACGF+PRD QQIY L S
Sbjct: 195 LEMAITNYAMDFAISKGWCPVIPPTIVRTDIALACGFQPRDEEG-QQIYELDSYTSPLVS 253
Query: 244 DTDLGLTATAEIALAGMGLDSILDLSSGPKKICGVNRAYRAEAGASGKDTKGLYRVHEFT 303
L TAEI+LA +G + + +K+ GV+RAYR EAGA GK+ +GLYR+HEFT
Sbjct: 254 SPKQCLIGTAEISLAALGFKKTFN-NFTERKVVGVSRAYRREAGARGKENRGLYRLHEFT 312
Query: 304 KVELFVWAKPEQSDQILEELKQFQIDIVRELGLSAQVLNMPSNDLGSPAYKKYDIEAWMP 363
KVELF W P +S ++ E+ FQ + V L + A++LNMP+ +LGS A +KYDIEAWMP
Sbjct: 313 KVELFAWTHPSRSSEMFNEIVNFQKEFVETLKIPARILNMPTAELGSSASQKYDIEAWMP 372
Query: 364 GRGSFGEITSTSNCTDFQSRRMHTRFRNEEGELEYAHTLNGTAMAVPRVIVALVENNYDP 423
R S+GEITS SNC ++Q+RR+ TR+RN++ + + HTLNGTA A+PR+I+A++E N+
Sbjct: 373 ARQSYGEITSASNCLEYQARRLLTRYRNDK-DSGFVHTLNGTAAAIPRLIIAILE-NHQQ 430
Query: 424 VSDTISIPQALQPYL 438
T+ +P+ L PY+
Sbjct: 431 EDGTVKVPETLVPYI 445
>Hs8923421 [J] KOG2509 Seryl-tRNA synthetase
Length = 518
Score = 257 bits (656), Expect = 3e-68
Identities = 156/438 (35%), Positives = 239/438 (53%), Gaps = 26/438 (5%)
Query: 19 PQFNVKYMISKLDEFSDSIQARELVDGEELQISLKMLPELYQKSRVADHTIANLQHSRKT 78
PQ +++ + +E + +++ R+ GE L + +Q+ R I +L+ +
Sbjct: 56 PQLDIERFCACPEEAAHALELRK---GELRSADLPAIISTWQELRQLQEQIRSLEEEKAA 112
Query: 79 IEAQVK-----------QDKTRARELGSELKSLKKQYQDLLKTQREVKDQITEVCGSLPN 127
+ V+ Q + + L + + ++K+ L + ++++Q LPN
Sbjct: 113 VTEAVRALLANQDSGEVQQDPKYQGLRARGREIRKELVHLYPREAQLEEQFYLQALKLPN 172
Query: 128 LIHPSVP--KTSSPIIDQWINKQAQYKPDERFEHLKIMVNKGMVDFETASNVTGTSWYYL 185
HP VP S + + + + R HL+I ++ + S+V+G YYL
Sbjct: 173 QTHPDVPVGDESQARVLHMVGDKPVFSFQPR-GHLEIGEKLDIIRQKRLSHVSGHRSYYL 231
Query: 186 CNDGARLEHALVQYATTKARKANFNLVIPPSVVRNEVIDACGFRPRDTNNEQQIYRLSDT 245
GA L+H LV + K + F + P ++R V + CG P N QIY +
Sbjct: 232 RGAGALLQHGLVNFTFNKLLRRGFTPMTVPDLLRGAVFEGCGMTPNA--NPSQIYNIDPA 289
Query: 246 ---DLGLTATAEIALAGMGLDSILDLSSGPKKICGVNRAYRAEAGASGKDTKGLYRVHEF 302
DL L TAE+ LAG +D + P ++ + YRAE +G++ +GLYRVH F
Sbjct: 290 RFKDLNLAGTAEVGLAGYFMDHTVAFRDLPVRMVCSSTCYRAETN-TGQEPRGLYRVHHF 348
Query: 303 TKVELFVWAKP--EQSDQILEELKQFQIDIVRELGLSAQVLNMPSNDLGSPAYKKYDIEA 360
TKVE+F P EQS Q+LEE Q++I+ ELGL +VL+MP+ +LG PAY+K+DIEA
Sbjct: 349 TKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEA 408
Query: 361 WMPGRGSFGEITSTSNCTDFQSRRMHTRFRNEEGELEYAHTLNGTAMAVPRVIVALVENN 420
WMPGRG FGE+TS SNCTDFQSRR+H F+ E GEL++AHT+N TA AVPR+++AL+E+N
Sbjct: 409 WMPGRGRFGEVTSASNCTDFQSRRLHIMFQTEAGELQFAHTVNATACAVPRLLIALLESN 468
Query: 421 YDPVSDTISIPQALQPYL 438
++ +P ALQ YL
Sbjct: 469 QQK-DGSVLVPPALQSYL 485
>7300003 [J] KOG2509 Seryl-tRNA synthetase
Length = 417
Score = 238 bits (608), Expect = 1e-62
Identities = 141/390 (36%), Positives = 218/390 (55%), Gaps = 30/390 (7%)
Query: 74 HSRKTIEAQVKQDKTRARELG------------SELKSLKKQYQDLLKTQREVKDQITEV 121
H K +EA + + + +L + + ++ Q+L + Q+
Sbjct: 22 HDAKAVEAPIHRPVPTSAQLDELERNVVVRHHKNNVPLIRSLIQELDAGDQHKLRQLQAE 81
Query: 122 CGSLPNLIHPSV------PKTSSPIIDQWINKQAQYKPDERFEHLKIMVNKGMVDFETAS 175
LPN HP + P+ + + + + Q++ K F L +N +D
Sbjct: 82 LEQLPNATHPRLRDYGEEPRELAQYVHRQLTPQSRLK---EFSELARALNLYRMDH--LG 136
Query: 176 NVTGTSWYYLCNDGARLEHALVQYATTKARKANFNLVIPPSVVRNEVIDACGFRPRDTNN 235
N TG YYL A LE A++QYA + F L+ P ++ EVI++CG R
Sbjct: 137 NYTGHKSYYLTGQLATLEQAIIQYALQAVTEHGFKLISVPDILPKEVIESCGMRTE--GE 194
Query: 236 EQQIYRLSDTDLGLTATAEIALAGMGLDSILDLSSGPKKICGVNRAYRAEAGASGKDTKG 295
Q+Y+L DT L+ T+E+ALAG + +L P K+ V+R YRAE ++ KG
Sbjct: 195 RTQVYKL-DTGECLSGTSEMALAGFFANKLLSEDQLPLKVTAVSRCYRAETSGL-QEEKG 252
Query: 296 LYRVHEFTKVELFVWAKPEQSDQILEELKQFQIDIVRELGLSAQVLNMPSNDLGSPAYKK 355
+YRVH+F KVE+F EQS+ LEE K ++D+ R LGL+ ++L+MP +LG+PAY+K
Sbjct: 253 IYRVHQFNKVEMFAICTEEQSEAELEEFKNIEVDLFRRLGLNFRLLDMPPCELGAPAYQK 312
Query: 356 YDIEAWMPGRGSFGEITSTSNCTDFQSRRMHTRF-RNEEGELEYAHTLNGTAMAVPRVIV 414
YDIEAWMPGR +GEI+S SNCTD+Q+RR+ R+ R+ +G++ +AHT+NGTA A+PR+++
Sbjct: 313 YDIEAWMPGRQMWGEISSCSNCTDYQARRLGIRYRRSADGQILHAHTINGTATAIPRLLI 372
Query: 415 ALVENNYDPVSDTISIPQALQPYLDGMEFM 444
AL+E+ D I IP L+P++D E +
Sbjct: 373 ALLESYQK--EDGIEIPAVLRPFMDNQELI 400
>ECU04g0750 [J] KOG2509 Seryl-tRNA synthetase
Length = 429
Score = 183 bits (465), Expect = 4e-46
Identities = 130/441 (29%), Positives = 215/441 (48%), Gaps = 35/441 (7%)
Query: 13 LRTVKKPQFNVKYMISKLDEFSDSI---QARELVDGEELQISLKMLPELYQKSRVADHTI 69
+ ++ P+ K + S+ F D + +A EL D + ++++ ++ D
Sbjct: 4 INLIRDPKTREKVVESEKKRFRDGLAVGKAYEL-DRKRIEMNFRL-----------DQIN 51
Query: 70 ANLQHSRKTIEAQVKQDKTRA----RELGSELKSLKKQYQDLLKTQREVKDQITEVCGSL 125
+ + I++ +Q K + E +E+K L + + L + V+D++ +V +
Sbjct: 52 TRINQLNREIKSGYRQGKNKEDGDLSEKVAEIKGLSDEAKGLRDDVKAVEDELNKVMKGI 111
Query: 126 PNLIHPSV----PKTSSPIIDQWINKQAQYKPDERFEHLKIMVNKGMVDFETASNVTGTS 181
N+I PSV + +PI+ + + + K F ++ K + V G
Sbjct: 112 GNIISPSVVVSNDEKDNPIVRSYRSSRNMQKNPRPF----CVLMKDFTHSVAGAKVMGHR 167
Query: 182 WYYLCNDGARLEHALVQYATTKARKANFNLVIPPSVVRNEVIDACGFRPRDTNNEQQIYR 241
YYL ARL AL +YA + + P ++R +V+ + ++ + Q+Y+
Sbjct: 168 GYYLSGKMARLAQALTRYAIDFLENKGYTYIQTPVMLRRDVMRKTS---QLSDFDDQLYK 224
Query: 242 LSDTDLGLTATAEIALAGMGLDSILDLSSGPKKICGVNRAYRAEAGASGKDTKGLYRVHE 301
+ D DL L AT+E +LA + +D + PKK CG + +R EAGA GKD GL+RVH+
Sbjct: 225 VED-DLYLIATSEQSLAALYMDERMVPQEVPKKFCGQSLCFRKEAGAHGKDNAGLFRVHQ 283
Query: 302 FTKVELFVWAKPEQSDQILEELKQFQIDIVRELGLSAQVLNMPSNDLGSPAYKKYDIEAW 361
F K+E FV PE+S + EE+ + + + L +S V+ + S +L A KYD+EA+
Sbjct: 284 FEKIEQFVICGPEESQKYHEEMIKACEEFYQSLDISYNVVGIVSGELNDAAAIKYDLEAY 343
Query: 362 MPGRGSFGEITSTSNCTDFQSRRMHTRFR--NEEGELEYAHTLNGTAMAVPRVIVALVEN 419
P + E+ S SNCTD+QSR + R+ E Y H LNGT AV R + +VEN
Sbjct: 344 FPSAEKYRELVSCSNCTDYQSRELEIRYGVVKENNRKIYVHLLNGTMCAVQRALCCIVEN 403
Query: 420 NYDPVSDTISIPQALQPYLDG 440
D I+IP LQ Y G
Sbjct: 404 Y--QTGDGIAIPDVLQGYFGG 422
>At5g27470 [J] KOG2509 Seryl-tRNA synthetase
Length = 451
Score = 183 bits (465), Expect = 4e-46
Identities = 113/380 (29%), Positives = 194/380 (50%), Gaps = 19/380 (5%)
Query: 79 IEAQVKQDKTRARELGSELKSLKKQYQDLLKTQREVKDQITEVCGSLP---NLIHPSVP- 134
+ QV Q K + + ++ +K QD + EV++ + L NL+H SVP
Sbjct: 59 LNKQVAQLKIKKEDASEIIQQTEKNKQDSTAKEAEVREAYAALKAKLEQVGNLVHDSVPV 118
Query: 135 ---KTSSPIIDQWINKQAQYKPDERFEHLKIMVNKGMVDFETASNVTGTSWYYLCNDGAR 191
+ ++ +I W K+ + H+ ++ G+ D + + + G ++L DG
Sbjct: 119 DKDEANNLVIKLWGEKRFSTPGLKLKNHVDLVELLGIADTKRGAEIAGARGFFLKGDGLM 178
Query: 192 LEHALVQYATTKARKANFNLVIPPSVVRNEVIDACGFRPRDTNNEQQIYRLSDT--DLGL 249
L AL+ + T +K F + PP +R +V+ C + ++++Y+++ D L
Sbjct: 179 LNQALINFGLTFLKKRGFTGLQPPFFMRKDVMAKCA---QLAQFDEELYKVTGEGDDKYL 235
Query: 250 TATAEIALAGMGLDSILDLSSGPKKICGVNRAYRAEAGASGKDTKGLYRVHEFTKVELFV 309
ATAE L +D + + P + G + +R EAG+ G+DT G++RVH+F K+E F
Sbjct: 236 IATAEQPLCAYHIDEWIHPTELPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKIEQFC 295
Query: 310 WAKPEQ--SDQILEELKQFQIDIVRELGLSAQVLNMPSNDLGSPAYKKYDIEAWMPGRGS 367
P + S ++L+E+ + D + L L Q++++ S L A KKYD+EAW P +
Sbjct: 296 ITGPNENASWEMLDEMMKNSEDFYQALKLPYQIVSIVSGALNDAAAKKYDLEAWFPSSET 355
Query: 368 FGEITSTSNCTDFQSRRMHTRF---RNEEGELEYAHTLNGTAMAVPRVIVALVENNYDPV 424
F E+ S SNCTD+Q+RR+ R+ ++ E +Y H LN T A R I ++EN
Sbjct: 356 FRELVSCSNCTDYQARRLEIRYGQKKSNEQTKQYVHMLNSTLTATERTICCILENYQR-- 413
Query: 425 SDTISIPQALQPYLDGMEFM 444
D + IP+ LQP++ G F+
Sbjct: 414 EDGVDIPEVLQPFMGGETFL 433
>CE25136 [J] KOG2509 Seryl-tRNA synthetase
Length = 441
Score = 182 bits (462), Expect = 9e-46
Identities = 113/344 (32%), Positives = 182/344 (52%), Gaps = 12/344 (3%)
Query: 97 LKSLKKQYQDLLKTQR--EVKDQITEVCGSLPNLIHPSVPKTS---SPIIDQWINKQAQY 151
+KS +KQ + Q+ ++ D++ + +PN+ VP+ S + I+ +W K
Sbjct: 86 MKSGEKQTNGAVSEQKYKQLWDELYDEAILIPNMTQDGVPRGSEDQAKIVAEWGEK---- 141
Query: 152 KPDERFEHLKIMVNKGMVDFETASNVTGTSWYYLCNDGARLEHALVQYATTKARKANFNL 211
+ DE K++ + T + +G Y A LE AL+ YA + F
Sbjct: 142 REDECLTAEKLVQTWRSLLHPT--DASGQRSYVFLGALASLEKALLDYAHERVCALGFRP 199
Query: 212 VIPPSVVRNEVIDACGFRPRDTNNEQQIYRLSDTDLGLTATAEIALAGMGLDSILDLSSG 271
+ P +V EV ACG R + Q ++ L+ TAE+ +A +
Sbjct: 200 ITVPDIVSGEVTQACGVMQRSDHPIQYTLAGEESHTKLSGTAEMGIAAFLRGRTFNQDQL 259
Query: 272 PKKICGVNRAYRAEAGASGKDTKGLYRVHEFTKVELFVWAKPEQSDQILEELKQFQIDIV 331
P ++ ++R +R E S + K LYRVHEF+KVE+FV + PEQS L+ L + Q
Sbjct: 260 PIRLVSLSRCFRTEISKSASEAK-LYRVHEFSKVEMFVVSTPEQSAAELDYLVEVQKGTF 318
Query: 332 RELGLSAQVLNMPSNDLGSPAYKKYDIEAWMPGRGSFGEITSTSNCTDFQSRRMHTRFRN 391
+ LG+ + L MPS +LG+ A +K+DIEAWMPGR +GE++S SNCTDFQSRR+ +++
Sbjct: 319 QALGVHCRQLEMPSEELGASAARKFDIEAWMPGRKLYGEVSSASNCTDFQSRRLGIKYKT 378
Query: 392 EEGELEYAHTLNGTAMAVPRVIVALVENNYDPVSDTISIPQALQ 435
+G +YAHT NGTA+A R +++++E + +P+ L+
Sbjct: 379 ADGTTKYAHTCNGTALASTRALISVLETFQNDKKGLGELPEPLR 422
>SPAC29A4.15 [J] KOG2509 Seryl-tRNA synthetase
Length = 450
Score = 173 bits (439), Expect = 4e-43
Identities = 114/390 (29%), Positives = 195/390 (49%), Gaps = 17/390 (4%)
Query: 66 DHTIANLQHSRKTIEAQVKQDKTRARELGSELKSLKKQYQDLLKTQREVKDQITEVCGSL 125
D+T ++ +K I ++K K A EL E SL ++ ++L++ + ++ V S+
Sbjct: 50 DNTNKSINRVQKEIGLKMKA-KEDASELLEEKNSLTERKKNLIEQETAKNKEMLNVVSSI 108
Query: 126 PNLIHPSVP----KTSSPIIDQWINKQAQYKPDERFEHLKIMVNKGMVDFETASNVTGTS 181
N++H SVP + ++ II +W + + H +++ D E V+G
Sbjct: 109 GNIVHDSVPVSMDEDNNEIIRKWAPEGVTVEKKNCLSHHEVLTRLDGYDPERGVKVSGHR 168
Query: 182 WYYLCNDGARLEHALVQYATTKARKANFNLVIPPSVVRNEVIDACGFRPRDTNNEQQIYR 241
Y+L G AL+QY K + + P+++ +V+ + ++++Y+
Sbjct: 169 GYFLRQYGVFFNLALIQYGLDFLEKRGYIALQAPTMLNKDVMAKTA---QLEQFDEELYK 225
Query: 242 LSDTDLG--LTATAEIALAGMGLDSILDLSSG--PKKICGVNRAYRAEAGASGKDTKGLY 297
+ D D L AT+E ++ + S P K G + YR EAG+ G+D G++
Sbjct: 226 VIDGDEERYLIATSEQPISAYHSGEWFEKPSEQLPLKYAGYSTCYRREAGSHGRDAWGIF 285
Query: 298 RVHEFTKVELFVWAKPEQSDQILEELKQFQIDIVRELGLSAQVLNMPSNDLGSPAYKKYD 357
RVH F K+E FV PE+S + E+ D + L L +++ + S L + A KKYD
Sbjct: 286 RVHAFEKIEQFVLTDPEKSWEAFTEMINHAEDFYKSLELPYRIVAIVSGALNNAAAKKYD 345
Query: 358 IEAWMPGRGSFGEITSTSNCTDFQSRRMHTRF---RNEEGELEYAHTLNGTAMAVPRVIV 414
+EAW P +G + E+ S SNCTD+QSR + R + + E +Y H LN T A R +
Sbjct: 346 LEAWFPFQGEYKELVSCSNCTDYQSRNLEIRCGVKKMGDREKKYVHCLNSTLCATERALC 405
Query: 415 ALVENNYDPVSDTISIPQALQPYLDGMEFM 444
++EN P D +++P+ LQPY+ G F+
Sbjct: 406 CILENYQTP--DGVNVPKVLQPYMGGKTFL 433
>Hs16306548 [J] KOG2509 Seryl-tRNA synthetase
Length = 514
Score = 159 bits (401), Expect = 1e-38
Identities = 98/329 (29%), Positives = 172/329 (51%), Gaps = 22/329 (6%)
Query: 127 NLIHPSVPKTSSPIIDQWINK-QAQYKPDERFEHLKIMVNKGMVDFETASNVTGTSWYYL 185
NL+HPSVP ++ +D + + +++ H+ ++V + E + V G+ Y+L
Sbjct: 137 NLLHPSVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFL 196
Query: 186 CNDGARLEHALVQYATTKARKANFNLVIPPSVVRNEVIDACGFRPRDTNNEQQIYRL--- 242
LE AL+QYA + + P +R EV+ + + ++++Y++
Sbjct: 197 KGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVA---QLSQFDEELYKVIGK 253
Query: 243 --------SDTDLGLTATAEIALAGMGLDSILDLSSGPKKICGVNRAYRAEAGASGKDTK 294
S + L AT+E +A + D L P K G++ +R E G+ G+DT+
Sbjct: 254 GSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTR 313
Query: 295 GLYRVHEFTKVELFVWAKPE--QSDQILEELKQFQIDIVRELGLSAQVLNMPSNDLGSPA 352
G++RVH+F K+E FV++ P +S ++ EE+ + + LG+ ++N+ S L A
Sbjct: 314 GIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAA 373
Query: 353 YKKYDIEAWMPGRGSFGEITSTSNCTDFQSRRMHTRF---RNEEGELEYAHTLNGTAMAV 409
KK D+EAW PG G+F E+ S SNCTD+Q+RR+ R+ + ++E+ H LN T A
Sbjct: 374 SKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMCAT 433
Query: 410 PRVIVALVENNYDPVSDTISIPQALQPYL 438
R I A++EN I++P+ L+ ++
Sbjct: 434 TRTICAILENY--QTEKGITVPEKLKEFM 460
>CE05445 [J] KOG2509 Seryl-tRNA synthetase
Length = 487
Score = 156 bits (395), Expect = 5e-38
Identities = 99/328 (30%), Positives = 169/328 (51%), Gaps = 21/328 (6%)
Query: 127 NLIHPSVPKTSSPIIDQWINKQAQYKPDERFEHLKIMVNKGMVDFETASNVTGTSWYYLC 186
NLIH SV + ++ +++ H+ ++V D E + V G Y+L
Sbjct: 138 NLIHSSVVVSKDEANNKIERTFGDLSTKKKYSHVDLVVMVDGFDGERGTVVAGGRGYFLK 197
Query: 187 NDGARLEHALVQYATTKARKANFNLVIPPSVVRNEVIDACGFRPRDTNNEQQIYRLS--- 243
LE A++Q A + + + P +R EV+ + + + ++Y++S
Sbjct: 198 GPLVFLEQAIIQLALQRLNVKGYVPLYTPFFMRKEVMQEVA---QLSQFDDELYKVSSKG 254
Query: 244 -----DTDLG---LTATAEIALAGMGLDSILDLSSGPKKICGVNRAYRAEAGASGKDTKG 295
DT + L AT+E +A + + + P K GV+ +R E G+ G+DT+G
Sbjct: 255 SEIAGDTSVDEKYLIATSEQPIAAYHRNEWIKETELPIKYAGVSTCFRQEVGSHGRDTRG 314
Query: 296 LYRVHEFTKVELFVWAKPEQSDQ--ILEELKQFQIDIVRELGLSAQVLNMPSNDLGSPAY 353
++RVH+F K+E FV P ++ + +E+ +EL + QV+N+ S +L + A
Sbjct: 315 IFRVHQFEKIEQFVLCSPNDNESWTLFDEMIGNAESYYQELQIPYQVVNIVSGELNNAAA 374
Query: 354 KKYDIEAWMPGRGSFGEITSTSNCTDFQSRRMHTRF---RNEEGELEYAHTLNGTAMAVP 410
KK+D+EAW PG G++ E+ S SNC D+QSRR+ R+ + GE+ + H LN T A
Sbjct: 375 KKFDLEAWFPGSGAYRELVSCSNCLDYQSRRLKVRYGQTKKLSGEVPFVHMLNATMCATT 434
Query: 411 RVIVALVENNYDPVSDTISIPQALQPYL 438
RVI A++ENN + I++P A+Q ++
Sbjct: 435 RVICAILENN--QTEEGINVPTAIQQWM 460
>7295855 [J] KOG2509 Seryl-tRNA synthetase
Length = 501
Score = 144 bits (363), Expect = 3e-34
Identities = 98/332 (29%), Positives = 168/332 (50%), Gaps = 29/332 (8%)
Query: 127 NLIHPSVPKTSSPIIDQWINKQAQYKPDERFEHLKIMVNKGMVDFETASNVTGTSWYYLC 186
N +H SVP ++ ++ + ++ H+ ++V ++ E + V+G Y+L
Sbjct: 139 NHLHESVPVSNDEDENRVERTFGDCEKRGKYSHVDLIVMIDGMNAEKGAVVSGGRGYFLT 198
Query: 187 NDGARLEHALVQYATTKARKANFNLVIPPSVVRNEVIDACGFRPRDTNNEQQIYRL---- 242
LE AL+Q+A ++ + P +R EV+ + + ++++Y++
Sbjct: 199 GAAVFLEQALIQHALHLLYARDYVPLYTPFFMRKEVMQEVA---QLSQFDEELYKVVGKG 255
Query: 243 --SDTDLG-----LTATAEIALAGMGLDSILDLSSGPKKICGVNRAYRAEAGASGKDTKG 295
++G L AT+E +A D L SS P K G++ +R E G+ G+DT+G
Sbjct: 256 SEKAEEVGIDEKYLIATSEQPIAAYHRDEWLPESSLPIKYAGLSTCFRQEVGSHGRDTRG 315
Query: 296 LYRVHEFTKVELFVWAKP------EQSDQILEELKQFQIDIVRELGLSAQVLNMPSNDLG 349
++RVH+F KVE FV P E D+++ +QF + LG+ +V+N+ S L
Sbjct: 316 IFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQF----CQSLGIPYRVVNIVSGALN 371
Query: 350 SPAYKKYDIEAWMPGRGSFGEITSTSNCTDFQSRRMHTRF---RNEEGELEYAHTLNGTA 406
A KK D+EAW G G++ E+ S SNC D+Q+RR+ RF + ++Y H LN T
Sbjct: 372 HAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRFGQTKKMNAAVDYVHMLNATM 431
Query: 407 MAVPRVIVALVENNYDPVSDTISIPQALQPYL 438
A RVI A++E + I +P+ L+ Y+
Sbjct: 432 CAATRVICAILETHQTETG--IKVPEPLKKYM 461
>YDR023w [J] KOG2509 Seryl-tRNA synthetase
Length = 462
Score = 135 bits (341), Expect = 9e-32
Identities = 94/378 (24%), Positives = 181/378 (47%), Gaps = 30/378 (7%)
Query: 85 QDKTRARELGSELKSLKKQYQDLLKTQREVKDQITEVCGSLPNLIHPSVPKTSSPIIDQW 144
++K A L +E + L +Q ++L + +++ + + + N++HPSV ++ ++
Sbjct: 68 KNKEDASGLLAEKEKLTQQKKELTEKEQQEDKDLKKKVFQVGNIVHPSVVVSNDEENNEL 127
Query: 145 INKQAQYKPDE---------------RFEHLKIMVNKGMVDFETASNVTGTSWYYLCNDG 189
+ +KP++ H +I++ D + + G Y+ N G
Sbjct: 128 VRT---WKPEDLEAVGPIASVTGKPASLSHHEILLRLDGYDPDRGVKICGHRGYFFRNYG 184
Query: 190 ARLEHALVQYATTKARKANFNLVIPPSVVRNEVIDACGFRPRDTNNEQQIYRLSD--TDL 247
L AL+ Y + + P ++ E++ + + ++++Y++ D +
Sbjct: 185 VFLNQALINYGLQFLAAKGYIPLQAPVMMNKELMSKTA---QLSEFDEELYKVIDGEDEK 241
Query: 248 GLTATAEIALAGMGLDSILDLSSG--PKKICGVNRAYRAEAGASGKDTKGLYRVHEFTKV 305
L AT+E ++ + P G + +R EAG+ GKD G++RVH F K+
Sbjct: 242 YLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGSHGKDAWGVFRVHAFEKI 301
Query: 306 ELFVWAKPEQSDQILEELKQFQIDIVRELGLSAQVLNMPSNDLGSPAYKKYDIEAWMPGR 365
E FV +PE+S + E++ + + + L L +++ + S +L + A KKYD+EAW P +
Sbjct: 302 EQFVITEPEKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELNNAAAKKYDLEAWFPYQ 361
Query: 366 GSFGEITSTSNCTDFQSRRMHTRF---RNEEGELEYAHTLNGTAMAVPRVIVALVENNYD 422
+ E+ S SNCTD+QSR + R + + E +Y H LN T A R + ++EN
Sbjct: 362 KEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATQRALCCILENY-- 419
Query: 423 PVSDTISIPQALQPYLDG 440
D + +P+ L+ Y+ G
Sbjct: 420 QTEDGLVVPEVLRKYIPG 437
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.133 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,219,910
Number of Sequences: 60738
Number of extensions: 1123614
Number of successful extensions: 3810
Number of sequences better than 1.0e-05: 13
Number of HSP's better than 0.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3753
Number of HSP's gapped (non-prelim): 13
length of query: 444
length of database: 30,389,216
effective HSP length: 110
effective length of query: 334
effective length of database: 23,708,036
effective search space: 7918484024
effective search space used: 7918484024
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)