ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV0969 suspect: %id Z KOG0613 Cytoskeleton Projectin/twitchin and related proteins
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV0969 335921 331893 -1343
(1343 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
CE26070 [Z] KOG0613 Projectin/twitchin and related proteins 70 3e-11
CE27954 [Z] KOG0613 Projectin/twitchin and related proteins 52 5e-06
CE08376 [Y] KOG2992 Nucleolar GTPase/ATPase p130 52 5e-06
>CE26070 [Z] KOG0613 Projectin/twitchin and related proteins
Length = 2083
Score = 69.7 bits (169), Expect = 3e-11
Identities = 144/685 (21%), Positives = 264/685 (38%), Gaps = 118/685 (17%)
Query: 635 QLKEEQKINREQERKALEEIVSKGPPYPKNLCLTSAGRPKKPYRFYSAEEMKQRESMTVE 694
+L+E+ +IN+ E A+++ K L A + + EE + TVE
Sbjct: 1149 KLEEQAQINKAAEADAVKK--QKELDEKNKL---EANKKSAAEKLKLEEESAAKSKQTVE 1203
Query: 695 ELASFDALNDTKLSEKQQIKSIPLYKLKQLTLFNPNLPESTNRLNDIRGSLEKAGKRTVT 754
E A DA K +EKQ T D + + + K TV
Sbjct: 1204 EQAKLDAQTKEKTAEKQ-----------------------TGLEKDDKSTKDSESKETVD 1240
Query: 755 KMPVRKEAKRK-QKYFFDPSVKTVVHREKIPFHPPWQFPVNPPFALPVAKRPKSHSVEKM 813
+ P +K K+K +K S K+V + + P ++ V
Sbjct: 1241 EKPKKKVLKKKTEKSDSSISQKSVTSKTVVESGGP--------------SESETQKVADA 1286
Query: 814 SRRKRAIYQRTLLSNTLLPILQTLRAAAKATASVGVDPEKSKEHLRSMLQQARLTIAETL 873
+R+++ ++ L A+ TA D EKSK S L++A A
Sbjct: 1287 ARKQKETDEKQKLE-------------AEITAKKSAD-EKSKLEAESKLKKAAEVEAAKK 1332
Query: 874 QKARXXXXXXLTDGSKPIFQEAREKEVSTPTLSIPIMRTTSKVKTEEPKIPAFNSVSVQE 933
QK + D + EA K+ + L + +++K + E
Sbjct: 1333 QKEK--------DEQLKLDTEAASKKAAAEKLE---LEKQAQIKKAAEADAVKKEKELAE 1381
Query: 934 NNKAQSLIPTEQSSIKEIPLAVSKKRSSDETS-DVSDIRQNVSQVIDKLSTLIPSLTKAK 992
K +S T++++ +++ L KK+ ++ S + ++ ++Q KL + +
Sbjct: 1382 KQKLESEAATKKAAAEKLKLEEQKKKDAETASIEKQKEQEKLAQEQSKLEVDAKKSAEKQ 1441
Query: 993 ALPILVPSKKKQKSIL-NMDEVKIPLAKAKGPNFSKPTLKSTMNTPKSVTIIKTEEPGTD 1051
L SKK +++ ++DE K K K T KS + + KT
Sbjct: 1442 KLESETKSKKTEEAPKESVDE------KPKKKVLKKKTEKSDSSISQKSDTAKTVAESAG 1495
Query: 1052 SSMFDTETAPVLVQDTSPSKRVEDVKVPIHPPVIQTSKKTTELFNKYHFDLPSVDSDGRP 1111
S D+ET V D + ++ D K + + +KK+ E +K ++++ +
Sbjct: 1496 QS--DSETQKVSEADKAHKQKESDEKQKLESEI--AAKKSAEQKSK-------LETEAKT 1544
Query: 1112 VKTIPVMKRVKQYLSAEDVKK----LKKVKETYRKRKWRLANADKNKDLELRTRIKIAAR 1167
K I + K+ ED KK KK K+ K+K K E + K
Sbjct: 1545 KKVIE-DESAKKQKEQEDKKKGDDSAKKQKDQKEKQKLESEATSKKPTSEKQKDEKTPQE 1603
Query: 1168 KQFGEDESEAKRTWISTEYETRKIKLELDPEIKSSAAVMVSDKELLNIIAVSLEKLEIAR 1227
K E+E T T +LE+ E K S +KE +A S EK + ++
Sbjct: 1604 KAKSENE---------TVMTTEPQQLEVKSEPKKSDKTETVEKE----VASSTEKSDDSK 1650
Query: 1228 SIE----HDIIEEAKNYTKPKKRKQQ------KIEIDNGVNTAVDILKENMAKEHVLPAS 1277
+ E II++ K+ TKP++ ++ +I++++ ++ ++D + E+ + + AS
Sbjct: 1651 TKEPKEKKKIIKKKKDTTKPQEASKELSSDESRIDLESDISLSLDTVTES---DDLSTAS 1707
Query: 1278 TVTPISETPDVNKADSASTPNESED 1302
T+ E+ + +E+ED
Sbjct: 1708 TIKLQKESDESGIDSRMGQTSEAED 1732
>CE27954 [Z] KOG0613 Projectin/twitchin and related proteins
Length = 3484
Score = 52.4 bits (124), Expect = 5e-06
Identities = 146/731 (19%), Positives = 272/731 (36%), Gaps = 100/731 (13%)
Query: 625 EKDRLKNHRKQLKEEQKINREQERKALEEIVSKGPPYPKNLCLTSAGRPKKPYRFYSAEE 684
+K + K +K +K+++ EQ A E +++ T G KKP +
Sbjct: 358 DKSKPKTKKKIIKKKETPESEQVTAAEPEQQKISEVDVQSVAETEVGAKKKPDAEKPTDL 417
Query: 685 MKQRESMTVEELASFDALNDTKLSEKQQIKSIPLYKLKQLTLFNPNLPESTNRLNDIRGS 744
K ++ ++ +A + K + ++ N + + ++
Sbjct: 418 SKAKKDSKSKKSDEPEASTEEKSTTEKPT--------------NDKTSKKSAEKKTVKPK 463
Query: 745 LEKAGKRTVTKMPVRKEAKRKQKYFFDPSVKTVVHREKIPFHPPWQFP--VNPPFALPVA 802
E GK K PV + Q S ++K P ++ F P
Sbjct: 464 KEVTGKPLEAKKPVEDKKDASQPSSSKESSPPTDGKKKKQIPKALFIPDEISSRFGDPST 523
Query: 803 KRPKSHSVEKMSRRKRAIYQRTLLSNTLLPILQTLRAAAKATASVGVDPEKSKEHLRSML 862
+++ + R+ + +T P+++ L +ASV + E +KE
Sbjct: 524 MHSETNITTTIRGREGSADAKT-------PLVEPL------SASVSMKVESAKEKAEFSF 570
Query: 863 QQARLTIAETLQKARXXXXXXLTDGSKPIFQEAREKEVSTPTLSIPIMRTTSKVKTEEPK 922
++ T + +K +G P + ++ EV+ S + + K + +E K
Sbjct: 571 KRRSETPDDKSRKK---------EGLPPAKKSEKKDEVTAEKQSTEALIESKKKEVDESK 621
Query: 923 I----PAFNSVSVQENNKAQSLIPTEQSSIKEIPLAVSKKRSSDETSDVSDIRQNVSQVI 978
I P+ + S ++ P + + EI V KK++ + ++ SD S +
Sbjct: 622 ISEQQPSDKNKSEVVGVPEKAAGPETKKDVSEIE-EVPKKKTIKKKTEKSD-----SSIS 675
Query: 979 DKLSTLIPSLT-KAKALPILVPSKKKQKSILNMDEVKIPLAKA--KGPNFSKPTLKSTMN 1035
K + L P+ K+K+ + SKK + D+ K+ K + +K T+
Sbjct: 676 QKSNVLKPADDDKSKSDDVTDKSKKTTE-----DQTKVATDSKLEKAADTTKQIETETVV 730
Query: 1036 TPKSVT-IIKTEEPGTDSSMFDTETAPVLVQDTSPS-----KRVEDVKVPIHPPVIQTSK 1089
KS ++K + +DS + P +V+ T P+ K E K V K
Sbjct: 731 DDKSKKKVLKKKTEKSDSFISQKSETPPVVEPTKPAESEAQKIAEVNKAKKQKEVDDNLK 790
Query: 1090 KTTELFNKYHFDLP-SVDSDGRPVKTIPVMKRVKQYLSAEDVK-------------KLKK 1135
+ E+ K D ++++ KT V KQ E +K KL+
Sbjct: 791 REAEVAAKKIADEKLKIEAEANIKKTAEVEAAKKQKEKDEQLKLETEVVSKKSAAEKLEL 850
Query: 1136 VKETYRKRKWRLANADKNKDLELRTRI----KIAARKQFGEDESEAKRTWISTEYETRKI 1191
K+ K+ K K+L + ++ K AA K E+ES AK +S E
Sbjct: 851 EKQAQIKKAAEADAVKKQKELNEKNKLEAAKKSAADKLKLEEESAAKSKKVSEE------ 904
Query: 1192 KLELDPEIKSSAAVMVSDKELLNIIAVSLEKLEIARSIEHDIIEEAKNYTKPK--KRKQQ 1249
++ E K+ A E +++ ++ + E A K K K+K +
Sbjct: 905 SVKFGEEKKTKAGEKTVQVESEPTSKKTIDTKDVGAT------EPADETPKKKIIKKKTE 958
Query: 1250 KIEIDNGVNTAVDILKENMAKEHVLPASTVTPISETPDVNKADSASTPNESEDGRISEHS 1309
K + +A D K + KE P T +SET V +AD + E+++ +
Sbjct: 959 KSDSSISQKSATDSEKVSKQKEQDEP--TKPAVSETQMVTEADKSKKQKETDE----KLK 1012
Query: 1310 IDPNLAASTKR 1320
+D +AA TK+
Sbjct: 1013 LDAEIAAKTKQ 1023
>CE08376 [Y] KOG2992 Nucleolar GTPase/ATPase p130
Length = 971
Score = 52.4 bits (124), Expect = 5e-06
Identities = 129/611 (21%), Positives = 212/611 (34%), Gaps = 124/611 (20%)
Query: 734 STNRLNDIRGSLEKAGKRTVTKMPVRKEAKRKQKYFFDPSVKTVVHREKIPFHPPWQFPV 793
S++ +D + + K T PV K+A+ D EK P P
Sbjct: 343 SSDSSDDEKKPVAKPAPAKATPKPVAKKAESSSDSSDD---------EKKPAAKPTPAKA 393
Query: 794 NPPFALPVAKRPKSHSVEKMSRRKRAIYQRTLLSNTLLPILQTL---------RAAAKAT 844
P PVAK+ +S S + K+ + + T T P + A AK T
Sbjct: 394 TPK---PVAKKAESSS-DSSDDEKKPVAKPTSAKATPKPAAKKADSSSDSSDDEAPAKKT 449
Query: 845 ASVGVDPEKSK-----------EHLRSMLQQARLTIAETLQKARXXXXXXLTDGSKP--- 890
+ SK E + A++T T +K D KP
Sbjct: 450 PAKAAPKPASKKAESSSDSSDDEKPAAKSTPAKITPKPTAKKVASSSSDSSDDEKKPAAK 509
Query: 891 ----------IFQEAREKEVSTPTLSIPIMRTTSKVKTEEPKIPAFNSVSVQENNKAQSL 940
+ ++A S+ P+ + TS T +P + S +++A
Sbjct: 510 PTPANATPKPVAKKAESSSDSSDDEKKPVAKPTSAKATPKPAAKKADLSSDFSDDEA--- 566
Query: 941 IPTEQSSIKEIPLAVSKKRSSDETSDVSDIRQNVSQVIDKLSTLIPSLTKAKALPILVPS 1000
P +++ K P SKK S +SD SD + ++ T AK P
Sbjct: 567 -PAKKTPAKAAPKPASKKAES--SSDSSDDEKPAAKS-----------TPAKTTPKPTAK 612
Query: 1001 KKKQKSILNMDEVKIPLAKAKGPNFSKPTLKSTMNTPKSVTIIKTEEPGTDSSMFDTETA 1060
K S + D+ K P+AK PT S TPK K + +DSS
Sbjct: 613 KAASSSSDSSDDEKKPVAK--------PT--SAKATPKPAA--KKADSSSDSS------- 653
Query: 1061 PVLVQDTSPSKRVEDVKVPIHPPVIQTSKKTTELFNKYHFDLPSVDSDGRPVKTIPVMKR 1120
D +P+K K P+ P ++ K K S D + +P K PV
Sbjct: 654 ----DDEAPAK-----KTPVKPTPVKIVAK------KVDSSSDSSDDEKKPTKATPVKVT 698
Query: 1121 VKQYL---------SAEDVKK--LKKVKETYRKRKWRLANADKNKDLELRTRIKI----- 1164
K S++D KK +K+ K++ +++D + D E + K
Sbjct: 699 PKSVTKKAAASSSDSSDDEKKPVVKQTPNVVPKKEKAASSSDDSSDDEKKPTAKPTPKAT 758
Query: 1165 ---AARK-----QFGEDESEAKRTWISTEYETRKIKLELDPEIKSSAAVMVSDKELLNII 1216
+A+K +DE+ AK+T + +K E S+ + K+
Sbjct: 759 PKQSAKKADSSDDSSDDEAPAKKTPAKSTPAKTAVKKEASSSSDDSSDDEKTKKKSATTP 818
Query: 1217 AVSLEKLEIARSIEHDIIEEAKNYTKPKKR---KQQKIEIDNGVNTAVDILKENMAKEHV 1273
A S K + ++ D ++ ++ KP K + Q+ + + T + K
Sbjct: 819 AKSTPKTALKKAESSDSSDDDEDLPKPSKAVTPRPQRADSEESAETEESSSRTPALKAKP 878
Query: 1274 LPASTVTPISE 1284
L ST + E
Sbjct: 879 LATSTEKAVYE 889
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.309 0.127 0.341
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,082,639
Number of Sequences: 60738
Number of extensions: 2836475
Number of successful extensions: 10513
Number of sequences better than 1.0e-05: 3
Number of HSP's better than 0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 10495
Number of HSP's gapped (non-prelim): 17
length of query: 1343
length of database: 30,389,216
effective HSP length: 119
effective length of query: 1224
effective length of database: 23,161,394
effective search space: 28349546256
effective search space used: 28349546256
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)