ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV1048 good J KOG2317 Translation, ribosomal structure and biogenesis Putative translation initiation inhibitor UK114/IBM1
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV1048 364888 364478 -137
(137 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
7298219 [J] KOG2317 Putative translation initiation inhibitor UK... 65 3e-11
SPBC2G2.04c [J] KOG2317 Putative translation initiation inhibito... 64 6e-11
YER057c [J] KOG2317 Putative translation initiation inhibitor UK... 61 4e-10
At3g20390 [J] KOG2317 Putative translation initiation inhibitor ... 60 7e-10
CE01809 [J] KOG2317 Putative translation initiation inhibitor UK... 58 4e-09
SPAC1039.10 [J] KOG2317 Putative translation initiation inhibito... 57 6e-09
YIL051c [J] KOG2317 Putative translation initiation inhibitor UK... 53 1e-07
Hs5032215 [J] KOG2317 Putative translation initiation inhibitor ... 50 9e-07
>7298219 [J] KOG2317 Putative translation initiation inhibitor UK114/IBM1
Length = 138
Score = 65.1 bits (157), Expect = 3e-11
Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Query: 29 NQLLFSSGCVGTDPVTNEL-PEDLEQQARNSMINLKKVLEVSGSSVDSVLKILLFVSDGS 87
++ ++ SGC+G D T +L P +QA+ ++ NL+ VL+ + S VD V+K +F+ D +
Sbjct: 28 DRTVYVSGCLGLDKDTMKLVPGGPTEQAQKALENLEAVLKAADSGVDKVIKNTVFLKDLN 87
Query: 88 YAGIVNKVFKEFFPNQ-PARSCIVVAFPNNKLKVELECIA 126
G VN+V+K F PARSC VA VE+ECIA
Sbjct: 88 DFGAVNEVYKRVFNKDFPARSCFQVAKLPMDALVEIECIA 127
>SPBC2G2.04c [J] KOG2317 Putative translation initiation inhibitor UK114/IBM1
Length = 162
Score = 63.9 bits (154), Expect = 6e-11
Identities = 41/120 (34%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 17 PLISPGFATESG-NQLLFSSG---CVGTDPVTNE--LPEDLEQQARNSMINLKKVLEVSG 70
P+ SP ++ NQ + ++G C G PV N + + Q R ++NL++VL +G
Sbjct: 41 PINSPKLSSAGPYNQAIKANGVIYCSGQIPVANGKVIEGTVGDQTRQCLLNLQEVLTEAG 100
Query: 71 SSVDSVLKILLFVSDGSYAGIVNKVFKEFFPN-QPARSCI---VVAFPNNKLKVELECIA 126
SS++ ++K+ +F++D VNKV+ E P+ +PARSC+ V +K+E+ECIA
Sbjct: 101 SSLNKIVKVNIFLADMDDFAAVNKVYTEVLPDPKPARSCVAVKTVPLSTQGVKIEIECIA 160
>YER057c [J] KOG2317 Putative translation initiation inhibitor UK114/IBM1
Length = 129
Score = 61.2 bits (147), Expect = 4e-10
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Query: 29 NQLLFSSGCVGTDPVTNELPEDLEQQARNSMINLKKVLEVSGSSVDSVLKILLFVSDGSY 88
N L+F SG + P + + +A + N+K VLE S SS+D V+K+ +F++D ++
Sbjct: 27 NNLIFLSGQIPVTPDNKLVEGSIADKAEQVIQNIKNVLEASNSSLDRVVKVNIFLADINH 86
Query: 89 AGIVNKVFKEFF-PNQPARSCIVVAFPNNKLKVELECIA 126
N V+ ++F ++PARSC+ VA + +E+E IA
Sbjct: 87 FAEFNSVYAKYFNTHKPARSCVAVAALPLGVDMEMEAIA 125
>At3g20390 [J] KOG2317 Putative translation initiation inhibitor UK114/IBM1
Length = 187
Score = 60.5 bits (145), Expect = 7e-10
Identities = 35/102 (34%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 29 NQLLFSSGCVGTDPVTNE-LPEDLEQQARNSMINLKKVLEVSGSSVDSVLKILLFVSDGS 87
N L+F SG +G P T + + E +E Q + N+ ++L+ SG+ SV+K + ++D +
Sbjct: 86 NNLVFLSGVLGLIPETGKFVSESVEDQTEQVLKNMGEILKASGADYSSVVKTTIMLADLA 145
Query: 88 YAGIVNKVFKEFFP-NQPARSCIVVAFPNNKLKVELECIAEI 128
VN+++ ++FP PARS VA K+E+ECIA +
Sbjct: 146 DFKTVNEIYAKYFPAPSPARSTYQVAALPLNAKIEIECIATL 187
>CE01809 [J] KOG2317 Putative translation initiation inhibitor UK114/IBM1
Length = 185
Score = 57.8 bits (138), Expect = 4e-09
Identities = 38/128 (29%), Positives = 68/128 (52%), Gaps = 3/128 (2%)
Query: 1 MARKITWKDVGVKDGFPLISPGFATESGNQLLFSSGCVGTDPVTNELPEDLEQQARNSMI 60
MA+K+T + + + I P ++ SG +G DP T +L E + +Q S+
Sbjct: 49 MAQKVTRQIISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLK 108
Query: 61 NLKKVLEVSGSSVDSVLKILLFVSDGSYAGIVNKVFKEFFPN-QPARSCI-VVAFPNNKL 118
NL +VL+ +G+ +V+K + + + + VN+V+ ++F + PAR+ V A P L
Sbjct: 109 NLGEVLKAAGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPARAAYQVAALPKGGL 168
Query: 119 KVELECIA 126
VE+E +A
Sbjct: 169 -VEIEAVA 175
>SPAC1039.10 [J] KOG2317 Putative translation initiation inhibitor UK114/IBM1
Length = 126
Score = 57.4 bits (137), Expect = 6e-09
Identities = 36/107 (33%), Positives = 64/107 (59%), Gaps = 6/107 (5%)
Query: 24 ATESGNQLLFSSGCVGTDPVTNELPEDLEQQARNSMINLKKVLEVSGSSVDSVLKILLFV 83
A +SG L+F SG N +P +++Q R ++ NL +VL V+GSS++ ++K+ +F+
Sbjct: 20 AVKSGG-LIFCSGQAAVKD-GNFVPGTIQEQTRLTIENLAEVLRVAGSSLEKLVKVNIFL 77
Query: 84 SDGSYAGIVNKVFKEFFPN-QPARSCIV---VAFPNNKLKVELECIA 126
+D +N+V+KE P+ PAR+ + + + K+E+ECIA
Sbjct: 78 TDIDDFAAMNEVYKEMLPDPMPARTTVAAGKIPLSSKGGKIEIECIA 124
>YIL051c [J] KOG2317 Putative translation initiation inhibitor UK114/IBM1
Length = 145
Score = 53.1 bits (126), Expect = 1e-07
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 29 NQLLFSSGCVGTDPVTNELPEDLEQQARNSMINLKKVLEVSGSSVDSVLKILLFVSDGSY 88
N ++ SG + P + + ++A N+K +L S SS+D+++K+ +F++D
Sbjct: 43 NNFVYVSGQIPYTPDNKPVQGSISEKAEQVFQNVKNILAESNSSLDNIVKVNVFLADMKN 102
Query: 89 AGIVNKVF-KEFFPNQPARSCIVVAFPNNKLKVELECIA 126
N V+ K F ++PARSC+ VA + +E+E IA
Sbjct: 103 FAEFNSVYAKHFHTHKPARSCVGVASLPLNVDLEMEVIA 141
>Hs5032215 [J] KOG2317 Putative translation initiation inhibitor UK114/IBM1
Length = 137
Score = 50.1 bits (118), Expect = 9e-07
Identities = 26/100 (26%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Query: 29 NQLLFSSGCVGTDPVTNELPED-LEQQARNSMINLKKVLEVSGSSVDSVLKILLFVSDGS 87
++ ++ SG +G DP + +L + ++A+ ++ N+ ++L+ +G +V+K + ++D +
Sbjct: 28 DRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNMGEILKAAGCDFTNVVKTTVLLADIN 87
Query: 88 YAGIVNKVFKEFF-PNQPARSCIVVAFPNNKLKVELECIA 126
VN+++K++F N PAR+ VA ++E+E +A
Sbjct: 88 DFNTVNEIYKQYFKSNFPARAAYQVAALPKGSRIEIEAVA 127
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.136 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,593,414
Number of Sequences: 60738
Number of extensions: 334010
Number of successful extensions: 839
Number of sequences better than 1.0e-05: 8
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 833
Number of HSP's gapped (non-prelim): 8
length of query: 137
length of database: 30,389,216
effective HSP length: 95
effective length of query: 42
effective length of database: 24,619,106
effective search space: 1034002452
effective search space used: 1034002452
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)