ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV1101 good Z KOG3174 Cytoskeleton F-actin capping protein, beta subunit
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV1101 381615 382451 279
(279 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YIL034c [Z] KOG3174 F-actin capping protein beta subunit 291 5e-79
Hs4826659 [Z] KOG3174 F-actin capping protein beta subunit 207 1e-53
7296053 [Z] KOG3174 F-actin capping protein beta subunit 197 1e-50
CE01608 [Z] KOG3174 F-actin capping protein beta subunit 185 7e-47
SPAC631.01c [Z] KOG3174 F-actin capping protein beta subunit 184 9e-47
At1g71790 [Z] KOG3174 F-actin capping protein beta subunit 157 1e-38
Hs22041545 [Z] KOG3174 F-actin capping protein beta subunit 54 2e-07
>YIL034c [Z] KOG3174 F-actin capping protein beta subunit
Length = 287
Score = 291 bits (746), Expect = 5e-79
Identities = 143/285 (50%), Positives = 202/285 (70%), Gaps = 9/285 (3%)
Query: 4 DEKYDAACELLYRLDPTKVKTHLQNLIALEPEIAEGLLSSIDIPLTIKKDTDANNKEFLC 63
D ++DAA +LL RL+PT ++ +L NLI L+P +A+ LLSS+D+PL+ +KD+ +N+E+LC
Sbjct: 3 DAQFDAALDLLRRLNPTTLQENLNNLIELQPNLAQDLLSSVDVPLSTQKDSADSNREYLC 62
Query: 64 CDYNRDIDSHRSPWSNQYFPELSAEDLKESPFPSEPLRELEVACNNSFELYRDLYYEGGY 123
CDYNRDIDS RSPWSN Y+PELS +DL++SPFPS PLR+LE+ N+SF++YRDLYYEGG
Sbjct: 63 CDYNRDIDSFRSPWSNTYYPELSPKDLQDSPFPSAPLRKLEILANDSFDVYRDLYYEGGI 122
Query: 124 TSTYLWDVDEST----DFAGVILFKKAESDDSKWDSIHVISATHDEEGME-VTYNVTTTV 178
+S YLWD++E DFAGV+LFKK +SD S WDSIHV T + Y VTTT+
Sbjct: 123 SSVYLWDLNEEDFNGHDFAGVVLFKKNQSDHSNWDSIHVFEVTTSPSSPDSFNYRVTTTI 182
Query: 179 ILHLENLSKEQ--QLSLSGNLTRENSKTVKLQNVSTVEQLVPAHSSSLGSMIEDIESKLR 236
ILHL+ +Q + LSGNLTR+ K + + ++ + +H ++LGS+IEDIES++R
Sbjct: 183 ILHLDKTKTDQNSHMMLSGNLTRQTEKDIAIDMSRPLDVIFTSHVANLGSLIEDIESQMR 242
Query: 237 SMLEIVYFEKTLDIYNVLRER--NDDSTKLQKEQHSELIENFQKL 279
++LE VYFEKT DI++ + + + K+ +E+I Q L
Sbjct: 243 NLLETVYFEKTRDIFHQTKNAAIASSAEEANKDAQAEVIRGLQSL 287
>Hs4826659 [Z] KOG3174 F-actin capping protein beta subunit
Length = 272
Score = 207 bits (527), Expect = 1e-53
Identities = 121/281 (43%), Positives = 171/281 (60%), Gaps = 21/281 (7%)
Query: 4 DEKYDAACELLYRLDPTKVKTHLQNLIALEPEIAEGLLSSIDIPLTIKKDTDANNKEFLC 63
D++ D A +L+ RL P +++ +L +LI L P + E LLSS+D PL I +D K++L
Sbjct: 3 DQQLDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVG-KDYLL 61
Query: 64 CDYNRDIDSHRSPWSNQYFPELSAEDLKESPFPSEPLRELEVACNNSFELYRDLYYEGGY 123
CDYNRD DS+RSPWSN+Y P L ++ PS LR+LEV NN+F+ YRDLY+EGG
Sbjct: 62 CDYNRDGDSYRSPWSNKYDPPL-----EDGAMPSARLRKLEVEANNAFDQYRDLYFEGGV 116
Query: 124 TSTYLWDVDESTDFAGVILFKKAESDDSK----WDSIHVISATHDEEGMEVTYNVTTTVI 179
+S YLWD+D FAGVIL KKA K WDSIHV+ G Y +T+TV+
Sbjct: 117 SSVYLWDLDHG--FAGVILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVM 174
Query: 180 LHLE-NLSKEQQLSLSGNLTRENSKTVKLQNVSTVEQLVPAHSSSLGSMIEDIESKLRSM 238
L L+ N S ++L G+LTR+ K TV P H +++G ++ED+E+K+RS
Sbjct: 175 LWLQTNKSGSGTMNLGGSLTRQMEKD------ETVSDCSP-HIANIGRLVEDMENKIRST 227
Query: 239 LEIVYFEKTLDIYNVLRERNDDSTKLQKEQ-HSELIENFQK 278
L +YF KT DI N LR + K ++E ++L+E ++
Sbjct: 228 LNEIYFGKTKDIVNGLRSVQTFADKSKQEALKNDLVEALKR 268
>7296053 [Z] KOG3174 F-actin capping protein beta subunit
Length = 276
Score = 197 bits (501), Expect = 1e-50
Identities = 110/254 (43%), Positives = 157/254 (61%), Gaps = 22/254 (8%)
Query: 8 DAACELLYRLDPTKVKTHLQNLIALEPEIAEGLLSSIDIPLTIKKDTDANNKEFLCCDYN 67
D A +L+ RL P +++ +L +LI L P++ E LLSS+D PL I KD + + K++L CDYN
Sbjct: 7 DCALDLMRRLPPQQIEKNLIDLIDLAPDLCEDLLSSVDQPLKIAKDKE-HGKDYLLCDYN 65
Query: 68 RDIDSHRSPWSNQYFPELSAEDLKESPFPSEPLRELEVACNNSFELYRDLYYEGGYTSTY 127
RD DS+RSPWSN Y+P L ++ PSE LR+LE+ N +F+ YR++YYEGG +S Y
Sbjct: 66 RDGDSYRSPWSNSYYPPL-----EDGQMPSERLRKLEIEANYAFDQYREMYYEGGVSSVY 120
Query: 128 LWDVDESTDFAGVILFKKAESDDSK-----WDSIHVISATHDEEGMEVTYNVTTTVILHL 182
LWD+D FA VIL KKA D SK WDSIHV+ G Y +T+T +L L
Sbjct: 121 LWDLDHG--FAAVILIKKA-GDGSKMIRGCWDSIHVVEVQEKTTGRTAHYKLTSTAMLWL 177
Query: 183 E-NLSKEQQLSLSGNLTRENSKTVKLQNVSTVEQLVPAHSSSLGSMIEDIESKLRSMLEI 241
+ N ++L G+LTR+ + + S H +++G M+E++E+K+R+ L
Sbjct: 178 QTNKQGSGTMNLGGSLTRQQEQDANVSESS-------PHIANIGKMVEEMENKIRNTLNE 230
Query: 242 VYFEKTLDIYNVLR 255
+YF KT DI N LR
Sbjct: 231 IYFGKTKDIVNGLR 244
>CE01608 [Z] KOG3174 F-actin capping protein beta subunit
Length = 270
Score = 185 bits (469), Expect = 7e-47
Identities = 109/270 (40%), Positives = 162/270 (59%), Gaps = 24/270 (8%)
Query: 4 DEKYDAACELLYRLDPTKVKTHLQNLIALEPEIAEGLLSSIDIPLTIKKDTDANNKEFLC 63
+++ D A +L+ RL P +L +LI L P + + LLS+ID PL I D + K++L
Sbjct: 3 EQQLDCALDLMRRLPPQHCDKNLTDLIDLCPHLVDDLLSTIDQPLKIAADRETG-KQYLL 61
Query: 64 CDYNRDIDSHRSPWSNQYFPELSAEDLKESPFPSEPLRELEVACNNSFELYRDLYYEGGY 123
CDYNRD DS+RSPWSN Y P L ++ PSE R++E+ N +FE YRDLY+EGG
Sbjct: 62 CDYNRDGDSYRSPWSNTYDPPL-----EDGQLPSEKRRKMEIEANAAFESYRDLYFEGGV 116
Query: 124 TSTYLWDVDESTDFAGVILFKKAESDDSK-----WDSIHVISATHDEEGMEVTYNVTTTV 178
+S Y WD+D FAG++L KK E D +K WDSIHVI T E + Y +T+T+
Sbjct: 117 SSVYFWDLDNG-GFAGIVLIKK-EGDGAKNITGCWDSIHVIEIT--ERARQAHYKLTSTI 172
Query: 179 ILHLE-NLSKEQQLSLSGNLTRENSKTVKLQNVSTVEQLVPAHSSSLGSMIEDIESKLRS 237
+L L+ N S ++L G+LTR++ + + +T H +++G MIED ESK+R
Sbjct: 173 MLWLQTNKSSSGVMNLGGSLTRQHEMDAPINDQNT-------HLANMGRMIEDQESKMRL 225
Query: 238 MLEIVYFEKTLDIYNVLRERNDDSTKLQKE 267
+ +YF KT + + LR + ++L+K+
Sbjct: 226 TINEIYFGKTKKVMSDLRS-TEKQSELEKQ 254
>SPAC631.01c [Z] KOG3174 F-actin capping protein beta subunit
Length = 268
Score = 184 bits (468), Expect = 9e-47
Identities = 103/255 (40%), Positives = 161/255 (62%), Gaps = 22/255 (8%)
Query: 8 DAACELLYRLDPTKVKTHLQNLIALEPEIAEGLLSSIDIPLTIKKDTDANNKEFLCCDYN 67
DAA +LL RL+P + +L ++++ P++A+ LLSS+D PL + +++ N ++L CD+N
Sbjct: 5 DAALDLLRRLNPKDISKNLDTILSVAPDLADVLLSSVDQPLKVNTCSESGN-QYLLCDFN 63
Query: 68 RDIDSHRSPWSNQYFPELSAEDLKESPFPSEPLRELEVACNNSFELYRDLYYEGGYTSTY 127
RD DS+RSPWSN+Y P L ++ ++ +R+LEV+ N + +Y DLYYEGG +S Y
Sbjct: 64 RDGDSYRSPWSNKYDPPL-----EDGLVSTDRVRKLEVSLNEAIRVYLDLYYEGGVSSVY 118
Query: 128 LWDVDESTDFAGVILFKKAE-SDDSKWDSIHVISATHDEEGMEVTYNVTTTVILHLENLS 186
LWD D+S +AG +L KKA S+ S WDSIHV E Y +T+T+IL L + S
Sbjct: 119 LWDQDDS--YAGAVLIKKASTSNSSGWDSIHVFECLPTTETNVYDYRLTSTIILFLSSGS 176
Query: 187 KEQQ------LSLSGNLTRENSKTVKLQNVSTVEQLVPAHSSSLGSMIEDIESKLRSMLE 240
+EQ L+LSG+LTR+ S+ + + T +++G ++E++E+++R+ L+
Sbjct: 177 EEQSALPSKALNLSGHLTRQTSQRLPAADDDT-------EIANVGKLVEEMETRMRNFLQ 229
Query: 241 IVYFEKTLDIYNVLR 255
VYF KT DI N R
Sbjct: 230 DVYFGKTKDIINQTR 244
>At1g71790 [Z] KOG3174 F-actin capping protein beta subunit
Length = 263
Score = 157 bits (398), Expect = 1e-38
Identities = 91/246 (36%), Positives = 144/246 (57%), Gaps = 28/246 (11%)
Query: 8 DAACELLYRLDPTKVKTHLQNLIALEPEIAEGLLSSIDIPLTIKKDTDANNKEFLCCDYN 67
+AA LL R+ P + +T L L++L P+ + LLS +D+PL + +D ++ K+F+ C+YN
Sbjct: 2 EAALGLLRRMPPKQSETALSALLSLIPQHSSDLLSQVDLPLQVLRDIESG-KDFILCEYN 60
Query: 68 RDIDSHRSPWSNQYFPELSAEDLKESPFPSEPLRELEVACNNSFELYRDLYYEGGYTSTY 127
RD DS+RSPWSN+Y P L +++ +PS LR+LEV N+ F +YRD YYEGG +S Y
Sbjct: 61 RDADSYRSPWSNKYLPPL-----EDALYPSSELRKLEVEANDIFAIYRDQYYEGGISSVY 115
Query: 128 LWDVDESTDFAGVILFKKAES----------DDSKWDSIHVISATHDEEGMEVTYNVTTT 177
+W+ D++ F L KK S ++ WD+IHVI +EE M Y +T+T
Sbjct: 116 MWE-DDNEGFVACFLIKKDGSKSGHGRRGCLEEGAWDAIHVIQVGSEEEEM-AQYCLTST 173
Query: 178 VILHLENLSKEQ-QLSLSGNLTRENSKTVKLQNVSTVEQLVPAHSSSLGSMIEDIESKLR 236
++L L + + LSG++ R+ + + + H ++G MIE++E KLR
Sbjct: 174 IMLSLTTDDESSGKFGLSGSIRRQMKMELAVAD---------GHLCNMGRMIEELEGKLR 224
Query: 237 SMLEIV 242
+ L+ V
Sbjct: 225 NSLDQV 230
>Hs22041545 [Z] KOG3174 F-actin capping protein beta subunit
Length = 330
Score = 54.3 bits (129), Expect = 2e-07
Identities = 28/73 (38%), Positives = 44/73 (59%), Gaps = 1/73 (1%)
Query: 4 DEKYDAACELLYRLDPTKVKTHLQNLIALEPEIAEGLLSSIDIPLTIKKDTDANNKEFLC 63
D++ D A +L+ L P +++ L NLI L P + E LL S++ + I +D + K++L
Sbjct: 3 DQQLDYALDLMRHLPPQQIEKKLSNLIDLIPHLCEDLLPSVNQIMKIARDKEV-GKDYLL 61
Query: 64 CDYNRDIDSHRSP 76
CD NRD D +R P
Sbjct: 62 CDCNRDGDCYRLP 74
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.312 0.131 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,174,982
Number of Sequences: 60738
Number of extensions: 751003
Number of successful extensions: 1935
Number of sequences better than 1.0e-05: 7
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1904
Number of HSP's gapped (non-prelim): 7
length of query: 279
length of database: 30,389,216
effective HSP length: 105
effective length of query: 174
effective length of database: 24,011,726
effective search space: 4178040324
effective search space used: 4178040324
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)