ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV1219 good O KOG0366 Posttranslational modification, protein turnover, chaperones Protein geranylgeranyltransferase type II, beta subunit
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV1219 428070 427099 -324
(324 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YPR176c [O] KOG0366 Protein geranylgeranyltransferase type II be... 468 e-132
At5g12210 [O] KOG0366 Protein geranylgeranyltransferase type II ... 324 9e-89
At3g12070 [O] KOG0366 Protein geranylgeranyltransferase type II ... 310 1e-84
Hs21359854 [O] KOG0366 Protein geranylgeranyltransferase type II... 310 2e-84
SPAC167.02 [O] KOG0366 Protein geranylgeranyltransferase type II... 308 5e-84
HsM4759018 [O] KOG0366 Protein geranylgeranyltransferase type II... 308 5e-84
7295883 [O] KOG0366 Protein geranylgeranyltransferase type II be... 297 2e-80
CE24762 [O] KOG0366 Protein geranylgeranyltransferase type II be... 275 8e-74
ECU08g1290 [O] KOG0366 Protein geranylgeranyltransferase type II... 186 3e-47
CE09598 [O] KOG0365 Beta subunit of farnesyltransferase 140 3e-33
7300143 [O] KOG0365 Beta subunit of farnesyltransferase 140 3e-33
Hs10835059 [O] KOG0365 Beta subunit of farnesyltransferase 136 5e-32
Hs4826900 [O] KOG0367 Protein geranylgeranyltransferase Type I b... 134 2e-31
SPAC17G6.04c [O] KOG0365 Beta subunit of farnesyltransferase 132 9e-31
At2g39550 [O] KOG0367 Protein geranylgeranyltransferase Type I b... 122 5e-28
7296904 [O] KOG0367 Protein geranylgeranyltransferase Type I bet... 119 8e-27
YDL090c [O] KOG0365 Beta subunit of farnesyltransferase 118 1e-26
At5g40280 [O] KOG0365 Beta subunit of farnesyltransferase 116 4e-26
CE22159 [O] KOG0367 Protein geranylgeranyltransferase Type I bet... 99 6e-21
SPAC2E1P5.04c [O] KOG0367 Protein geranylgeranyltransferase Type... 97 2e-20
YGL155w [O] KOG0367 Protein geranylgeranyltransferase Type I bet... 79 9e-15
>YPR176c [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 325
Score = 468 bits (1203), Expect = e-132
Identities = 224/315 (71%), Positives = 259/315 (82%)
Query: 6 LLRDKHIDYIASLDTKKDDLEYWLSEHLRLNGVYWGLTALYLLDSIETFNKEDVIQFVLS 65
LL++KHI YI SLDTKK + EYWL+EHLRLNG+YWGLTAL +LDS ETF KE+VI FVLS
Sbjct: 7 LLKEKHIRYIESLDTKKHNFEYWLTEHLRLNGIYWGLTALCVLDSPETFVKEEVISFVLS 66
Query: 66 CWDHKTGGFAAFPRHDGHLLTTLSGLQILATYNALERLGSEKQEQLEKFILSNQKADGSF 125
CWD K G FA FPRHD HLLTTLS +QILATY+AL+ LG +++ +L FI NQ DGSF
Sbjct: 67 CWDDKYGAFAPFPRHDAHLLTTLSAVQILATYDALDVLGKDRKVRLISFIRGNQLEDGSF 126
Query: 126 QGDSFGEVDTRFVYTALSCLSILHKLTKEVVEPAVSYILRCYNFDGGFGLNPEAESHAAQ 185
QGD FGEVDTRFVYTALS LSIL +LT EVV+PAV ++L+CYNFDGGFGL P AESHAAQ
Sbjct: 127 QGDRFGEVDTRFVYTALSALSILGELTSEVVDPAVDFVLKCYNFDGGFGLCPNAESHAAQ 186
Query: 186 AFTCIAALAIVGKLDSLTPAQQENIAVWLSERQVPEGGLNGRPSKLPDVCYSWWVLSTLS 245
AFTC+ ALAI KLD L+ Q E I WL ERQ+PEGGLNGRPSKLPDVCYSWWVLS+L+
Sbjct: 187 AFTCLGALAIANKLDMLSDDQLEEIGWWLCERQLPEGGLNGRPSKLPDVCYSWWVLSSLA 246
Query: 246 ILQKADWIDFPKLTEFILHCQDPKNGGISDRPDNEVDVFHTVFGLGGLSIMKYPGLRDID 305
I+ + DWI++ KLTEFIL CQD K GGISDRP+NEVDVFHTVFG+ GLS+M Y L ID
Sbjct: 247 IIGRLDWINYEKLTEFILKCQDEKKGGISDRPENEVDVFHTVFGVAGLSLMGYDNLVPID 306
Query: 306 PVYCMPYTVTKYFQR 320
P+YCMP +VT F++
Sbjct: 307 PIYCMPKSVTSKFKK 321
>At5g12210 [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 313
Score = 324 bits (831), Expect = 9e-89
Identities = 160/310 (51%), Positives = 210/310 (67%), Gaps = 7/310 (2%)
Query: 5 QLLRDKHIDYIASLDTKKDDLEYWLSEHLRLNGVYWGLTALYLLDSIETFNKEDVIQFVL 64
QL+ DKH+ YI + KK+ E + +HLR+NG YWGLT L LLD + ++E+VI +++
Sbjct: 3 QLVADKHVRYILMAEKKKESFESVVMDHLRMNGAYWGLTTLDLLDKLGCVSEEEVISWLM 62
Query: 65 SCWDHKTGGFAAFPRHDGHLLTTLSGLQILATYNALERLGSEKQEQLEKFILSNQKADGS 124
+C H++GGFA HD H+L TLS +QILA ++ + L K + ++ Q DGS
Sbjct: 63 TC-QHESGGFAGNTGHDPHILYTLSAVQILALFDKINILDIGK---VSSYVAKLQNEDGS 118
Query: 125 FQGDSFGEVDTRFVYTALSCLSILHKLTKEVVEPAVSYILRCYNFDGGFGLNPEAESHAA 184
F GD +GE+DTRF Y A+ CLSIL L K VE AV YI+ C N DGGFG P AESHA
Sbjct: 119 FSGDMWGEIDTRFSYIAICCLSILKCLDKINVEKAVKYIVSCKNLDGGFGCTPGAESHAG 178
Query: 185 QAFTCIAALAIVGKLDSLTPAQQENIAVWLSERQVPEGGLNGRPSKLPDVCYSWWVLSTL 244
Q F C+ ALAI G SL ++++ WL ERQ+ GGLNGRP KL DVCYSWWVLS+L
Sbjct: 179 QIFCCVGALAITG---SLHHVDKDSLGWWLCERQLKAGGLNGRPEKLADVCYSWWVLSSL 235
Query: 245 SILQKADWIDFPKLTEFILHCQDPKNGGISDRPDNEVDVFHTVFGLGGLSIMKYPGLRDI 304
++ + WID KL +FIL CQD NGGISDRP++ VD+FHT FG+ GLS+++YPG++ I
Sbjct: 236 IMIDRVHWIDKAKLVKFILDCQDLDNGGISDRPEDAVDIFHTYFGVAGLSLLEYPGVKVI 295
Query: 305 DPVYCMPYTV 314
DP Y +P V
Sbjct: 296 DPAYALPVDV 305
>At3g12070 [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 317
Score = 310 bits (795), Expect = 1e-84
Identities = 160/313 (51%), Positives = 211/313 (67%), Gaps = 10/313 (3%)
Query: 5 QLLRDKHIDYIASL--DTKKDDLEYWLSEHLRLNGVYWGLTALYLLDSIETFNKEDVIQF 62
+L+ KH+ YI +L + KK+ E + +HLR+NG YWGLT L LLD + + ++++V+ +
Sbjct: 4 KLVAGKHLRYILNLMAEKKKESFESVVMDHLRMNGAYWGLTTLALLDKLGSVSEDEVVSW 63
Query: 63 VLSCWDHKTGGFAAFPRHDGHLLTTLSGLQILATYNALERLGSEKQEQLEKFILSNQKAD 122
V++C H++GGFA HD H+L TLS +QILA ++ L L EK + +I Q D
Sbjct: 64 VMTC-QHESGGFAGNTGHDPHVLYTLSAVQILALFDKLNILDVEK---VSNYIAGLQNED 119
Query: 123 GSFQGDSFGEVDTRFVYTALSCLSILHKLTKEVVEPAVSYILRCYNFDGGFGLNPEAESH 182
GSF GD +GEVDTRF Y A+ CLSIL L K V+ AV YI+ C N DGGFG +P AESH
Sbjct: 120 GSFSGDIWGEVDTRFSYIAICCLSILKCLDKINVKKAVDYIVSCKNLDGGFGCSPGAESH 179
Query: 183 AAQAFTCIAALAIVGKLDSLTPAQQENIAVWLSERQVPE-GGLNGRPSKLPDVCYSWWVL 241
A Q F C+ ALAI G L + ++ + WL ERQ E GGLNGRP KLPDVCYSWWVL
Sbjct: 180 AGQIFCCVGALAITGNLHRV---DKDLLGWWLCERQDYESGGLNGRPEKLPDVCYSWWVL 236
Query: 242 STLSILQKADWIDFPKLTEFILHCQDPKNGGISDRPDNEVDVFHTVFGLGGLSIMKYPGL 301
S+L ++ + WI+ KL +FIL QD NGGISDRP VD+FHT FG+ GLS+++YPG+
Sbjct: 237 SSLIMIDRVHWIEKAKLVKFILDSQDMDNGGISDRPSYTVDIFHTYFGVAGLSLLEYPGV 296
Query: 302 RDIDPVYCMPYTV 314
+ IDP Y +P V
Sbjct: 297 KTIDPAYALPVHV 309
>Hs21359854 [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 331
Score = 310 bits (793), Expect = 2e-84
Identities = 149/309 (48%), Positives = 208/309 (67%), Gaps = 7/309 (2%)
Query: 6 LLRDKHIDYIASLDTKKDDLEYWLSEHLRLNGVYWGLTALYLLDSIETFNKEDVIQFVLS 65
LL +KH DYIAS +KKDD EY +SE+LR++G+YWGLT + L+ + N+E+++ F+ S
Sbjct: 18 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILAFIKS 77
Query: 66 CWDHKTGGFAAFPRHDGHLLTTLSGLQILATYNALERLGSEKQEQLEKFILSNQKADGSF 125
C H+ GG +A HD HLL TLS +QIL Y+++ + K + +++ QK DGSF
Sbjct: 78 C-QHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNK---VVEYVKGLQKEDGSF 133
Query: 126 QGDSFGEVDTRFVYTALSCLSILHKLTKEVVEPAVSYILRCYNFDGGFGLNPEAESHAAQ 185
GD +GE+DTRF + A++ L++L KL VE A+ ++L C NFDGGFG P +ESHA Q
Sbjct: 134 AGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQ 193
Query: 186 AFTCIAALAIVGKLDSLTPAQQENIAVWLSERQVPEGGLNGRPSKLPDVCYSWWVLSTLS 245
+ C LAI +L + + + WL ERQ+P GGLNGRP KLPDVCYSWWVL++L
Sbjct: 194 IYCCTGFLAITSQLHQVN---SDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLK 250
Query: 246 ILQKADWIDFPKLTEFILHCQDPKNGGISDRPDNEVDVFHTVFGLGGLSIMKYPGLRDID 305
I+ + WID KL FIL CQD + GG +DRP + VD FHT+FG+ GLS++ ++ ++
Sbjct: 251 IIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIKPVN 310
Query: 306 PVYCMPYTV 314
PV+CMP V
Sbjct: 311 PVFCMPEEV 319
>SPAC167.02 [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 311
Score = 308 bits (790), Expect = 5e-84
Identities = 142/311 (45%), Positives = 209/311 (66%), Gaps = 7/311 (2%)
Query: 6 LLRDKHIDYIASLDTKKDDLEYWLSEHLRLNGVYWGLTALYLLDSIETFNKEDVIQFVLS 65
LLRDKHI Y+ + + D+L++WL EHL ++ +YW + +LL + +KE ++ F+LS
Sbjct: 4 LLRDKHISYLHDIGNRTDELDFWLKEHLHVSAIYWSCMSFWLLKKKDQIDKERIVSFLLS 63
Query: 66 CWDHKTGGFAAFPRHDGHLLTTLSGLQILATYNALERLGSEKQEQLEKFILSNQKADGSF 125
C ++GGFA +P HD H+ T+ +Q+LA ++L + +K + +I+ Q DGS
Sbjct: 64 CLT-ESGGFACYPGHDDHITNTVYAVQVLAMLDSLHVVDKDK---VASYIIGLQNEDGSM 119
Query: 126 QGDSFGEVDTRFVYTALSCLSILHKLTKEVVEPAVSYILRCYNFDGGFGLNPEAESHAAQ 185
+GD +GE+D RF+Y+ ++CL+IL KL AV ++++CYNFDGGFGL P AESH A
Sbjct: 120 KGDRWGEIDARFLYSGINCLAILGKLDYLNKNTAVDWLMKCYNFDGGFGLCPGAESHGAM 179
Query: 186 AFTCIAALAIVGKLDSLTPAQQENIAVWLSERQVPEGGLNGRPSKLPDVCYSWWVLSTLS 245
FTC+AAL I+ KLD + +E + W+SERQV GGLNGRP KLPD CY WW LS L+
Sbjct: 180 VFTCVAALKILNKLDLI---DEELLGWWISERQVKGGGLNGRPEKLPDSCYGWWDLSPLA 236
Query: 246 ILQKADWIDFPKLTEFILHCQDPKNGGISDRPDNEVDVFHTVFGLGGLSIMKYPGLRDID 305
I+ K DWID +L +F+L QD +GG +DR ++ DV+HT F L GLS++++P + +D
Sbjct: 237 IIGKLDWIDRNQLIDFLLGTQDADSGGFADRKEDATDVYHTCFSLAGLSLLQFPNIEPVD 296
Query: 306 PVYCMPYTVTK 316
P +C+P VT+
Sbjct: 297 PRFCLPLEVTQ 307
>HsM4759018 [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 331
Score = 308 bits (790), Expect = 5e-84
Identities = 149/309 (48%), Positives = 208/309 (67%), Gaps = 7/309 (2%)
Query: 6 LLRDKHIDYIASLDTKKDDLEYWLSEHLRLNGVYWGLTALYLLDSIETFNKEDVIQFVLS 65
LL +KH DYIAS +KKDD EY +SE+LR++G+YWGLT + L+ + N+E+++ F+ S
Sbjct: 18 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILAFIKS 77
Query: 66 CWDHKTGGFAAFPRHDGHLLTTLSGLQILATYNALERLGSEKQEQLEKFILSNQKADGSF 125
C H+ GG +A HD HLL TLS +QIL Y+++ + K + +++ QK DGSF
Sbjct: 78 C-QHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNK---VVEYVKGLQKEDGSF 133
Query: 126 QGDSFGEVDTRFVYTALSCLSILHKLTKEVVEPAVSYILRCYNFDGGFGLNPEAESHAAQ 185
GD +GE+DTRF + A++ L++L KL VE A+ ++L C N DGGFG P +ESHA Q
Sbjct: 134 AGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNSDGGFGCRPGSESHAGQ 193
Query: 186 AFTCIAALAIVGKLDSLTPAQQENIAVWLSERQVPEGGLNGRPSKLPDVCYSWWVLSTLS 245
+ C LAI +L +T + + WL ERQ+P GGLNGRP KLPDVCYSWWVL++L
Sbjct: 194 IYCCTGFLAITSQLHQVT---SDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLK 250
Query: 246 ILQKADWIDFPKLTEFILHCQDPKNGGISDRPDNEVDVFHTVFGLGGLSIMKYPGLRDID 305
I+ + WID KL FIL CQD + GG +DRP + VD FHT+FG+ GLS++ ++ ++
Sbjct: 251 IIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIKPVN 310
Query: 306 PVYCMPYTV 314
PV+CMP V
Sbjct: 311 PVFCMPEEV 319
>7295883 [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 347
Score = 297 bits (760), Expect = 2e-80
Identities = 146/310 (47%), Positives = 208/310 (67%), Gaps = 8/310 (2%)
Query: 4 QQLLRDKHIDYIASLDTKKDDLEYWLSEHLRLNGVYWGLTALYLLDSIETFNKEDVIQFV 63
Q+L KH++YI + ++DD EY ++E LR++G+YWG TAL ++ +E ++ +I+FV
Sbjct: 27 QKLQFWKHVEYIENHGKQEDDYEYCMTEFLRMSGIYWGTTALDIMGQLERLERKSIIEFV 86
Query: 64 LSCWDHKTGGFAAFPRHDGHLLTTLSGLQILATYNALERLGSEKQEQLEKFILSNQKADG 123
C TGGFA HD HLL TLS +QIL TY+ALE + +E + +F++ Q+ DG
Sbjct: 87 KRCQCPNTGGFAPCEGHDPHLLYTLSAIQILCTYDALEEID---REAVVRFVVGLQQPDG 143
Query: 124 SFQGDSFGEVDTRFVYTALSCLSILHKLTKEV-VEPAVSYILRCYN-FDGGFGLNPEAES 181
SF GD +GEVDTRF + A++ L++L ++ + + VE AV ++L C N DGGFG P AES
Sbjct: 144 SFFGDKWGEVDTRFSFCAVASLTLLGRMEQTIDVEKAVKFVLSCCNQTDGGFGSKPGAES 203
Query: 182 HAAQAFTCIAALAIVGKLDSLTPAQQENIAVWLSERQVPEGGLNGRPSKLPDVCYSWWVL 241
HA + C+ ++ +L L + + WL ERQ+P GGLNGRP KLPDVCYSWWVL
Sbjct: 204 HAGLIYCCVGFFSLTHRLHLL---DVDKLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVL 260
Query: 242 STLSILQKADWIDFPKLTEFILHCQDPKNGGISDRPDNEVDVFHTVFGLGGLSIMKYPGL 301
++L+I+ + WI KL +FIL CQD + GG SDR N D+FHT+FG+GGLS++ + GL
Sbjct: 261 ASLTIMGRLHWISSEKLQQFILSCQDTETGGFSDRTGNMPDIFHTLFGIGGLSLLGHSGL 320
Query: 302 RDIDPVYCMP 311
+ I+P CMP
Sbjct: 321 KAINPTLCMP 330
>CE24762 [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 335
Score = 275 bits (702), Expect = 8e-74
Identities = 130/309 (42%), Positives = 198/309 (64%), Gaps = 7/309 (2%)
Query: 2 SEQQLLRDKHIDYIASLDTKKDDLEYWLSEHLRLNGVYWGLTALYLLDSIETFNKEDVIQ 61
S +LL+D H ++I + K+ Y ++EHLR++G+YW + A+ L +E + E+++
Sbjct: 20 SPNELLKDLHANFINQYEKNKNSYHYIMAEHLRVSGIYWCVNAMDLSKQLERMSTEEIVN 79
Query: 62 FVLSCWDHKTGGFAAFPRHDGHLLTTLSGLQILATYNALERLGSEKQEQLEKFILSNQKA 121
+VL C + GG+ P HD HLL TL +Q L +N++E+ ++ + +++ Q+
Sbjct: 80 YVLGC-RNTDGGYGPAPGHDSHLLHTLCAVQTLIIFNSIEKADADT---ISEYVKGLQQE 135
Query: 122 DGSFQGDSFGEVDTRFVYTALSCLSILHKLTKEVVEPAVSYILRCYNFDGGFGLNPEAES 181
DGSF GD GEVDTRF +L+ +L +L+ ++ AV +++RCYN DGGFG P +ES
Sbjct: 136 DGSFCGDLSGEVDTRFTLCSLATCHLLGRLSTLNIDSAVRFLMRCYNTDGGFGTRPGSES 195
Query: 182 HAAQAFTCIAALAIVGKLDSLTPAQQENIAVWLSERQVPEGGLNGRPSKLPDVCYSWWVL 241
H+ Q + C+ ALAI G+LD + ++ A WL+ RQ GGLNGRP KLPDVCYSWWVL
Sbjct: 196 HSGQIYCCVGALAIAGRLDEI---DRDRTAEWLAFRQCDSGGLNGRPEKLPDVCYSWWVL 252
Query: 242 STLSILQKADWIDFPKLTEFILHCQDPKNGGISDRPDNEVDVFHTVFGLGGLSIMKYPGL 301
++L+IL + ++ID + +FI CQD + GG +DRP + D FHTVFG+ LS+ L
Sbjct: 253 ASLAILGRLNFIDSDAMKKFIYACQDDETGGFADRPGDCADPFHTVFGIAALSLFGDDTL 312
Query: 302 RDIDPVYCM 310
+DP++CM
Sbjct: 313 ESVDPIFCM 321
>ECU08g1290 [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 358
Score = 186 bits (473), Expect = 3e-47
Identities = 118/326 (36%), Positives = 173/326 (52%), Gaps = 33/326 (10%)
Query: 3 EQQLLRDKHIDYIASLDTKKDDLEYWLSEHLRLNGVYWGLTALYLLDSIETFNKED-VIQ 61
E +L D+H +I ++ L Y+L+E RLN +YW + AL +L E D V+
Sbjct: 40 EMELEVDRHSAFIKETIKTRNFL-YYLTEPFRLNTIYWSVNALSMLGRGEMQEMRDRVVG 98
Query: 62 FVLSCWDHKTGGFAAFPRHDGHLLTTLSGLQILATYNALERLGSEKQEQLEKFILSNQKA 121
+V+ C + GGF + ++ +T + LQIL Y+ FI +
Sbjct: 99 YVMRC-RNDDGGFGGCEGYSSNITSTFNALQILYIYHI-----PYHDRSTAMFISGLLQP 152
Query: 122 DGSFQGDSFGEVDTRFVYTA---LSCLSILHK----------------LTKEVVEPA--V 160
G F D +GE DTR A L LS++ + L + V+P V
Sbjct: 153 AGYFHNDGYGETDTRISCCAVLGLHLLSLMERGDFDPRSLSRPICKVFLAEAGVDPGAIV 212
Query: 161 SYILRCYNFDGGFGLNPEAESHAAQAFTCIAALAIVGKLDSLTPAQQENIAVWLSERQVP 220
Y +CYN DGGFG AESHAAQ F C++ L +G L+++ +E +A +++ +Q
Sbjct: 213 LYTQKCYNLDGGFGAVKGAESHAAQVFCCLSTLRSLGALETV---DREEVARFIATKQAS 269
Query: 221 EGGLNGRPSKLPDVCYSWWVLSTLSILQKADWIDFPKLTEFILHCQDPKNGGISDRPDNE 280
GGL+GR SK DVCYS+W S+L ++ K +++ +LT FI CQ P +GG SDRP NE
Sbjct: 270 SGGLSGRVSKKEDVCYSFWAYSSLVLIGKECYVNQEELTRFIFSCQGP-SGGFSDRPGNE 328
Query: 281 VDVFHTVFGLGGLSIMKYPGLRDIDP 306
D++H +F L GLS++ Y GLR IDP
Sbjct: 329 TDLYHLMFALAGLSLLGYKGLRRIDP 354
>CE09598 [O] KOG0365 Beta subunit of farnesyltransferase
Length = 401
Score = 140 bits (352), Expect = 3e-33
Identities = 98/316 (31%), Positives = 146/316 (46%), Gaps = 18/316 (5%)
Query: 1 MSEQQLLRDKHIDYIASLDTKKDDLEYWLSEHLRLNGVYWGLTALYLLDS-IETFNKEDV 59
++E + R KH Y+ K Y + R YWG+ AL +LD+ I E++
Sbjct: 56 LAELTIFRQKHASYLLRY-LKNCPSSYATLDASRSWMCYWGVNALKILDAEIPNDVIENI 114
Query: 60 IQFVLSCWDHKTGGFAAFPRHDGHLLTTLSGLQILATYNALERLGSEKQEQLEKFILSNQ 119
I F+ SC +H GG+ P HL T + + L + E L S + L F+ +
Sbjct: 115 IVFLKSC-EHPEGGYGGGPGQLAHLAPTYAAVMCLVSLQKEEALRSINRVTLFNFLKKCK 173
Query: 120 KADGSFQGDSFGEVDTRFVYTALSCLSILHKLTKEVVEPAVSYILRCYNFDGGFGLNPEA 179
G F GE+D R Y AL+ I+ E+ +I+ C +F+GGFG P
Sbjct: 174 HESGGFYMHEGGEIDMRSAYCALATCEIVGLPMDEISNGVAEWIISCQSFEGGFGGEPYT 233
Query: 180 ESHAAQAFTCIAALAIVGKLDSLTPAQQENIAVWLSERQVP-EGGLNGRPSKLPDVCYSW 238
E+H F +A+L + L+ A E + W + RQ+ EGG GR +KL D CYS+
Sbjct: 234 EAHGGYTFCAVASLVL---LNRFRLADMEGLLRWATRRQMRFEGGFQGRTNKLVDGCYSF 290
Query: 239 WVLSTLSILQ----------KADWIDFPKLTEFILHCQDPKNGGISDRPDNEVDVFHTVF 288
W + +L + + L E+IL +GG D+PD VD++HT +
Sbjct: 291 WQGAIFPLLDGEMEREGRSLEKGLFEARMLEEYILVGCQSVHGGFKDKPDKPVDLYHTCY 350
Query: 289 GLGGLSI-MKYPGLRD 303
L GLS+ KY RD
Sbjct: 351 VLSGLSVAQKYSLARD 366
>7300143 [O] KOG0365 Beta subunit of farnesyltransferase
Length = 419
Score = 140 bits (352), Expect = 3e-33
Identities = 98/313 (31%), Positives = 155/313 (49%), Gaps = 28/313 (8%)
Query: 5 QLLRDKHIDYIASLDTKKDDLEYWLSEHLRLNGVYWGLTALYLLDSIETFNKED-----V 59
Q+ R +H Y+ ++ ++ Y + R VYW L A LL +FN +D V
Sbjct: 59 QIFRLEHQYYLDAM-LRRLPSNYECLDSSRAWCVYWILQAAQLL----SFNFDDQTLNHV 113
Query: 60 IQFVLSCWDHKTGGFAAFPRHDGHLLTTLSGLQILATYNALERLGSEKQEQLEKFILSNQ 119
+QF+ +C TGGF P HL T + + L + + + + L +F+ S +
Sbjct: 114 VQFLSNCRS-PTGGFGGGPGQYAHLAPTYAAVNSLCIIGSEQAYRAIDRPTLVQFLFSVR 172
Query: 120 KADGSFQGDSFGEVDTRFVYTALSCLSILH---KLTKEVVEPAVSYILRCYNFDGGFGLN 176
+DGSF+ GE D R Y A+SC +L+ + KE+ +I +C ++GGFG
Sbjct: 173 DSDGSFRLHVDGETDVRGAYCAISCAKLLNLPEPVIKELFAGTGDWIAQCQTYEGGFGGA 232
Query: 177 PEAESHAAQAFTCIAALAIVGKLDSLTPAQQENIAVWLSERQVP-EGGLNGRPSKLPDVC 235
P E+H F IA LA++ + D ++ + W RQ+ EGG GR +KL D C
Sbjct: 233 PGLEAHGGYTFCGIAGLALLNEADK---CDRQALLKWTLRRQMTYEGGFQGRTNKLVDGC 289
Query: 236 YSWWVLSTLSILQ----------KADWIDFPKLTEFILHCQDPKNGGISDRPDNEVDVFH 285
YS+WV +T+ I Q + D L E+IL C ++GG+ D+P D++H
Sbjct: 290 YSFWVGATIPITQATLSGVDKQMEHTLFDVEALQEYILLCCQKQSGGLIDKPGKPQDLYH 349
Query: 286 TVFGLGGLSIMKY 298
T + L G+SI ++
Sbjct: 350 TCYTLSGVSIAQH 362
>Hs10835059 [O] KOG0365 Beta subunit of farnesyltransferase
Length = 437
Score = 136 bits (342), Expect = 5e-32
Identities = 102/310 (32%), Positives = 149/310 (47%), Gaps = 20/310 (6%)
Query: 6 LLRDKHIDYIASLDTKKDDLEYWLSEHLRLNGVYWGLTALYLLDS-IETFNKEDVIQFVL 64
L R+KH Y+ + D Y + R YW L +L LLD I DV QF+
Sbjct: 73 LQREKHFHYLKRGLRQLTDA-YECLDASRPWLCYWILHSLELLDEPIPQIVATDVCQFLE 131
Query: 65 SCWDHKTGGFAAFPRHDGHLLTTLSGLQILATYNALERLGSEKQEQLEKFILSNQKADGS 124
C + GGF P HL T + + L E +E+L +++ S ++ DGS
Sbjct: 132 LCQSPE-GGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGS 190
Query: 125 FQGDSFGEVDTRFVYTALSCLSILHKLTKEVVEPAVSYILRCYNFDGGFGLNPEAESHAA 184
F GEVD R Y A S S+ + +T ++ E +I RC N++GG G P E+H
Sbjct: 191 FLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGG 250
Query: 185 QAFTCIAALAIVGKLDSLTPAQQENIAVWLSERQVP-EGGLNGRPSKLPDVCYSWWVLST 243
F +AAL I+ + SL +++ W++ RQ+ EGG GR +KL D CYS+W
Sbjct: 251 YTFCGLAALVILKRERSL---NLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGL 307
Query: 244 LSILQKA------------DWIDFPK-LTEFILHCQDPKNGGISDRPDNEVDVFHTVFGL 290
L +L +A W+ + L E+IL C GG+ D+P D +HT + L
Sbjct: 308 LPLLHRALHAQGDPALSMSHWMFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCL 367
Query: 291 GGLSIMKYPG 300
GLSI ++ G
Sbjct: 368 SGLSIAQHFG 377
>Hs4826900 [O] KOG0367 Protein geranylgeranyltransferase Type I beta subunit
Length = 377
Score = 134 bits (337), Expect = 2e-31
Identities = 100/327 (30%), Positives = 154/327 (46%), Gaps = 32/327 (9%)
Query: 7 LRDKHIDYIASLDTKKDDLEYWLSEHLRLNGVYWGLTALYLLDSIETFNKEDVIQFVLSC 66
LRD+H+ + + Y E RL ++ L+ L +LDS++ NK+D+I+++ S
Sbjct: 21 LRDRHVRFFQRCLQVLPE-RYSSLETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSL 79
Query: 67 WDHKTG--------GF-----------------AAFPRHDGHLLTTLSGLQILATYNALE 101
T GF A P GH+ T +GL L +
Sbjct: 80 QVLPTEDRSNLNRCGFRGSSYLGIPFNPSKAPGTAHPYDSGHIAMTYTGLSCLVILG--D 137
Query: 102 RLGSEKQEQLEKFILSNQKADGSFQGDSFG-EVDTRFVYTALSCLSILHKLTKEVVEPAV 160
L +E + + Q DGSF G E D RFVY A +L+ + ++ A+
Sbjct: 138 DLSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAI 197
Query: 161 SYILRCYNFDGGFGLNPEAESHAAQAFTCIAALAIVGKLDSLTPAQQEN-IAVWLSERQV 219
+YI R ++D G ESH F IA+L ++GKL+ + ++ N I W RQ
Sbjct: 198 TYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVFSEKELNRIKRWCIMRQ- 256
Query: 220 PEGGLNGRPSKLPDVCYSWWVLSTLSILQKADWIDFPKLTEFILHCQDPKNGGISDRPDN 279
+ G +GRP+K D CYS+WV +TL +L+ + +F K +IL QD GG + PD+
Sbjct: 257 -QNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQDRLVGGFAKWPDS 315
Query: 280 EVDVFHTVFGLGGLSIMKYPGLRDIDP 306
D H FG+ GLS+M+ G+ + P
Sbjct: 316 HPDALHAYFGICGLSLMEESGICKVHP 342
>SPAC17G6.04c [O] KOG0365 Beta subunit of farnesyltransferase
Length = 382
Score = 132 bits (331), Expect = 9e-31
Identities = 97/338 (28%), Positives = 161/338 (46%), Gaps = 48/338 (14%)
Query: 10 KHIDYIASLDTKKDDLEYWLSEHLRLNGVYWGLTALYLLDSIETFNKEDVIQFVLSCWDH 69
K +D + S T D W+ VYW L++L +L +++ E I V
Sbjct: 40 KMLDPLPSPFTVLDASRAWM--------VYWELSSLAILGKLDSSVCERAISSVRQL-KG 90
Query: 70 KTGGFAAFPRHDGHLLTTLSGLQILATYNALERLGSEKQEQLEKFILSNQKADGSFQGDS 129
+GGF D HLL+T + + + ++ + ++++L ++ S + DGSF+ ++
Sbjct: 91 PSGGFCGGNGQDEHLLSTYASILSICLCDSTDAYSLIERDRLYDWLFSLKNPDGSFRVNN 150
Query: 130 FGEVDTRFVYTALSCLSILHKLTKE--VVEPAVSYILRCYNFDGGFGLNPEAESHAAQAF 187
GE D R VY A+ C+S L ++ + + E + ++ +C ++GG P AE+H F
Sbjct: 151 EGESDARSVYAAV-CVSSLVGISMDDPLFEGTLQWLCKCQTYEGGLSGVPYAEAHGGYTF 209
Query: 188 TCIAALAIVGKLDSLTPAQQENIAVWLSERQVPE-GGLNGRPSKLPDVCYSWWVLSTLSI 246
+AA+A++G LD+L + ++ WL +RQ P G +GR +KL D CYSWWV ++ I
Sbjct: 210 CALAAIALLGGLDNL---NEIKLSTWLVQRQDPALYGFSGRSNKLVDGCYSWWVGASHVI 266
Query: 247 LQ----KADWIDFP-------KLTEFILHCQDPKNGGISDRPDNEVDVFHTVFGLGGLSI 295
+ A P KL +IL C +GG+ D+P D +HT + L GLS
Sbjct: 267 VASGYGSASHKSLPNLFYNPEKLLGYILQCCQSTSGGLRDKPPKRPDQYHTCYCLLGLSS 326
Query: 296 MKY---------------------PGLRDIDPVYCMPY 312
+ Y L P+YC+P+
Sbjct: 327 IAYDYRYHTSDGWSYKPSILHSSLSSLLPAHPIYCVPF 364
>At2g39550 [O] KOG0367 Protein geranylgeranyltransferase Type I beta subunit
Length = 375
Score = 122 bits (307), Expect = 5e-28
Identities = 98/336 (29%), Positives = 160/336 (47%), Gaps = 36/336 (10%)
Query: 8 RDKHIDYIASLDTKKDDLEYWLSEHLRLNGVYWGLTALYLLDSIETFNKEDVIQFVLSCW 67
+D+H+ Y+ + + Y E RL ++ ++ L+ L + + +K+ V ++VLS
Sbjct: 37 KDRHLMYLEMM-YELLPYHYQSQEINRLTLAHFIISGLHFLGARDRVDKDVVAKWVLSFQ 95
Query: 68 DHKTG----------GF-----AAFP-------RHDG-HLLTTLSGLQILATYNALERLG 104
T GF + FP +H+G HL +T L IL L
Sbjct: 96 AFPTNRVSLKDGEFYGFFGSRSSQFPIDENGDLKHNGSHLASTYCALAILKVIG--HDLS 153
Query: 105 SEKQEQLEKFILSNQKADGSFQGDSFG-EVDTRFVYTALSCLSILHKLTKEVVEPAVSYI 163
+ + L +++ Q+ DGSF G E D RFVY A + +L + E A +YI
Sbjct: 154 TIDSKSLLISMINLQQDDGSFMPIHIGGETDLRFVYCAAAICYMLDSWSGMDKESAKNYI 213
Query: 164 LRCYNFDGGFGLNPEAESHAAQAFTCIAALAIVGKL--DSLTPAQQENI------AVWLS 215
L C ++DGGFGL P +ESH + IA+L ++G + D L+ +I W
Sbjct: 214 LNCQSYDGGFGLIPGSESHGGATYCAIASLRLMGYIGVDLLSNDSSSSIIDPSLLLNWCL 273
Query: 216 ERQVPEGGLNGRPSKLPDVCYSWWVLSTLSILQKADWIDFPKLTEFILHCQDPKNGGISD 275
+RQ +GG GR +K D CY++W+ + L ++ ID L +F++ CQ K GG S
Sbjct: 274 QRQANDGGFQGRTNKPSDTCYAFWIGAVLKLIGGDALIDKMALRKFLMSCQS-KYGGFSK 332
Query: 276 RPDNEVDVFHTVFGLGGLSIMKYPGLRDIDPVYCMP 311
P D++H+ +G S+++ GL + P +P
Sbjct: 333 FPGQLPDLYHSYYGYTAFSLLEEQGLSPLCPELGLP 368
>7296904 [O] KOG0367 Protein geranylgeranyltransferase Type I beta subunit
Length = 395
Score = 119 bits (297), Expect = 8e-27
Identities = 80/239 (33%), Positives = 112/239 (46%), Gaps = 5/239 (2%)
Query: 82 GHLLTTLSGLQILATYNALERLGSEKQEQLEKFILSNQKADGSFQGDSFG-EVDTRFVYT 140
GHL T + L +L T + L ++ + + + QK +GSF G E D RFVY
Sbjct: 111 GHLAMTYTSLAVLVTLG--DDLSRLDRKSIVDGVAAVQKPEGSFSACIDGSEDDMRFVYC 168
Query: 141 ALSCLSILHKLTKEVVEPAVSYILRCYNFDGGFGLNPEAESHAAQAFTCIAALAIVGKLD 200
A + +L E +I R +D GF E E+H F +AAL + G+L
Sbjct: 169 AATICYMLDYWGDVNKETMFQFITRSLRYDYGFSQELEGEAHGGTTFCALAALHLSGQLH 228
Query: 201 SLTPAQQENIAVWLSERQVPEGGLNGRPSKLPDVCYSWWVLSTLSILQKADWIDFPKLTE 260
L E + WL RQ+ G GRP+K D CYS+W+ ++L IL + D+ + E
Sbjct: 229 RLDATTVERMKRWLIFRQMD--GFQGRPNKPVDTCYSFWIGASLCILDGFELTDYARNRE 286
Query: 261 FILHCQDPKNGGISDRPDNEVDVFHTVFGLGGLSIMKYPGLRDIDPVYCMPYTVTKYFQ 319
FIL QD GG + P D FHT GL GL+ PGL ++P M + Q
Sbjct: 287 FILSTQDKLIGGFAKWPQATPDPFHTYLGLCGLAFTGEPGLSPVNPSLNMSMAAYAHLQ 345
>YDL090c [O] KOG0365 Beta subunit of farnesyltransferase
Length = 431
Score = 118 bits (295), Expect = 1e-26
Identities = 83/291 (28%), Positives = 149/291 (50%), Gaps = 26/291 (8%)
Query: 15 IASLDTKKDDLEYWLSEHLRLNGVYW--GLTALYLLDSIETFNKEDVIQFVLSCWDHKTG 72
+ +LD + + YW++ L++ W T ++D + T + G
Sbjct: 99 MTALDASQPWMLYWIANSLKVMDRDWLSDDTKRKIVDKLFTISPSG-------------G 145
Query: 73 GFAAFPRHDGHLLTTLSGLQILATYNALERLGSE-KQEQLEKFILSNQKADGSFQGD-SF 130
F P HL +T + + L+ + ++ ++ + ++++S ++ +G F+
Sbjct: 146 PFGGGPGQLSHLASTYAAINALSLCDNIDGCWDRIDRKGIYQWLISLKEPNGGFKTCLEV 205
Query: 131 GEVDTRFVYTALSCLSILHKLTKEVVEPAVSYILRCYNFDGGFGLNPEA-ESHAAQAFTC 189
GEVDTR +Y ALS ++L+ LT+E+ E ++Y+ C N++GGFG P E+H F
Sbjct: 206 GEVDTRGIYCALSIATLLNILTEELTEGVLNYLKNCQNYEGGFGSCPHVDEAHGGYTFCA 265
Query: 190 IAALAIVGKLDSLTPAQQENIAVWLSERQV-PEGGLNGRPSKLPDVCYSWWVLSTLSILQ 248
A+LAI+ +D + E + W S RQ+ E G GR +KL D CYS+WV + +IL+
Sbjct: 266 TASLAILRSMDQI---NVEKLLEWSSARQLQEERGFCGRSNKLVDGCYSFWVGGSAAILE 322
Query: 249 KADW---IDFPKLTEFILH-CQDPKNGGISDRPDNEVDVFHTVFGLGGLSI 295
+ + L ++IL+ CQ+ + G+ D+P D +HT + L GL++
Sbjct: 323 AFGYGQCFNKHALRDYILYCCQEKEQPGLRDKPGAHSDFYHTNYCLLGLAV 373
>At5g40280 [O] KOG0365 Beta subunit of farnesyltransferase
Length = 482
Score = 116 bits (291), Expect = 4e-26
Identities = 72/256 (28%), Positives = 124/256 (48%), Gaps = 26/256 (10%)
Query: 5 QLLRDKHIDYI-----------ASLDTKKDDLEYWLSEHLRLNGVYWGLTALYLLDSIET 53
++ RDK +DY+ +SLD + L YW+ + L G ++++
Sbjct: 80 EIQRDKQLDYLMKGLRQLGPQFSSLDANRPWLCYWILHSIALLG-----------ETVDD 128
Query: 54 FNKEDVIQFVLSCWDHKTGGFAAFPRHDGHLLTTLSGLQILATYNALERLGSEKQEQLEK 113
+ + I F+ C + GG+ P HL TT + + L T + L S +E++
Sbjct: 129 ELESNAIDFLGRCQGSE-GGYGGGPGQLPHLATTYAAVNALVTLGGDKALSSINREKMSC 187
Query: 114 FILSNQKADGSFQGDSFGEVDTRFVYTALSCLSILHKLTKEVVEPAVSYILRCYNFDGGF 173
F+ + G F+ GE+D R YTA+S SIL+ + E+ + YIL C ++GG
Sbjct: 188 FLRRMKDTSGGFRMHDMGEMDVRACYTAISVASILNIMDDELTQGLGDYILSCQTYEGGI 247
Query: 174 GLNPEAESHAAQAFTCIAALAIVGKLDSLTPAQQENIAVWLSERQVPEGGLNGRPSKLPD 233
G P +E+H + +AA+ ++ ++D L +++ W RQ E G GR +KL D
Sbjct: 248 GGEPGSEAHGGYTYCGLAAMILINEVDRL---NLDSLMNWAVHRQGVEMGFQGRTNKLVD 304
Query: 234 VCYSWWVLSTLSILQK 249
CY++W + +LQ+
Sbjct: 305 GCYTFWQAAPCVLLQR 320
Score = 56.6 bits (135), Expect = 5e-08
Identities = 44/174 (25%), Positives = 75/174 (42%), Gaps = 5/174 (2%)
Query: 127 GDSFGEVDTR---FVYTALSCLSILHKLTKEVVEP-AVSYILRCYNFDGGFGLNPEAESH 182
G F +D Y L +++L + + +E A+ ++ RC +GG+G P H
Sbjct: 98 GPQFSSLDANRPWLCYWILHSIALLGETVDDELESNAIDFLGRCQGSEGGYGGGPGQLPH 157
Query: 183 AAQAFTCIAALAIVGKLDSLTPAQQENIAVWLSERQVPEGGLNGRPSKLPDVCYSWWVLS 242
A + + AL +G +L+ +E ++ +L + GG DV + +S
Sbjct: 158 LATTYAAVNALVTLGGDKALSSINREKMSCFLRRMKDTSGGFRMHDMGEMDVRACYTAIS 217
Query: 243 TLSILQKADWIDFPKLTEFILHCQDPKNGGISDRPDNEVDVFHTVFGLGGLSIM 296
SIL D L ++IL CQ GGI P +E +T GL + ++
Sbjct: 218 VASILNIMDDELTQGLGDYILSCQ-TYEGGIGGEPGSEAHGGYTYCGLAAMILI 270
>CE22159 [O] KOG0367 Protein geranylgeranyltransferase Type I beta subunit
Length = 360
Score = 99.4 bits (246), Expect = 6e-21
Identities = 68/234 (29%), Positives = 112/234 (47%), Gaps = 12/234 (5%)
Query: 81 DGHLLTTLSGLQILATYNALERLGSEKQEQLEKFILSNQKADGSFQGDSFG-EVDTRFVY 139
+ +L T S L LA + L ++ + K + + Q+ +G F G E D RFV+
Sbjct: 113 EANLAQTYSALLSLAILG--DDLKKVDRKAILKTVKTAQRDNGCFWSQGVGSESDMRFVF 170
Query: 140 TALSCLSILHKLTKEVVE--PAVSYILRCYNFDGGFGLNPEAESHAAQAFTCIAALAIVG 197
A++ IL ++ ++ ++ + N DGG G P ESH F IA+LA+
Sbjct: 171 CAVAISHILDGDKEQTIDWTKLAGFLRQSLNIDGGIGQAPGDESHGGSTFCAIASLALSN 230
Query: 198 KL---DSLTPAQQENIAVWLSERQVPEGGLNGRPSKLPDVCYSWWVLSTLSILQKADWID 254
+L + LT + + W ++Q + G +GR K D CY++W+ +TL IL +
Sbjct: 231 RLWTEEVLTRRDIDRLIRWAIQKQ--DIGFHGRAHKPDDSCYAFWIGATLKILNAYHLVS 288
Query: 255 FPKLTEFILHCQDPKNGGISDRPD--NEVDVFHTVFGLGGLSIMKYPGLRDIDP 306
L EF++ CQ P GG P+ D+ HT F + LS++ P + + P
Sbjct: 289 KQHLREFLMICQHPHIGGFCKYPEPGGYSDILHTYFSIAALSLLGEPAVNPVHP 342
>SPAC2E1P5.04c [O] KOG0367 Protein geranylgeranyltransferase Type I beta subunit
Length = 355
Score = 97.4 bits (241), Expect = 2e-20
Identities = 62/207 (29%), Positives = 103/207 (48%), Gaps = 18/207 (8%)
Query: 101 ERLGSEKQEQLEKFILSNQKADGSFQG---DSFGEVDTRFVYTALSCLSILHKLTKEVVE 157
+ L ++ ++ F+ + + G F+ S + D R +Y A + S+L + +
Sbjct: 112 DNLSRIDRDLIKNFVELCKTSQGHFRSIAVPSCSDQDMRQLYMATTIASLLDFSLSDPL- 170
Query: 158 PAVSYILRCYNFDGGFGLNPEAESHAAQAFTCIAALAIVGKL---DSLTPAQQ------- 207
++ YI C ++GGF L P E+HA F +A+ +++ K+ SL + Q
Sbjct: 171 CSIQYIKSCQRYEGGFSLLPYGEAHAGATFCALASWSLILKMIPNSSLNTSNQSYNLMDC 230
Query: 208 ----ENIAVWLSERQVPEGGLNGRPSKLPDVCYSWWVLSTLSILQKADWIDFPKLTEFIL 263
E + WL+ RQ+ GGLNGR +K D CY++WVLS+L +L +ID +L +++L
Sbjct: 231 VPKVERLIRWLASRQLSSGGLNGRTNKDVDTCYAYWVLSSLKLLDALPFIDGGELEKYLL 290
Query: 264 HCQDPKNGGISDRPDNEVDVFHTVFGL 290
GG S P DV H+ GL
Sbjct: 291 LHAQHALGGFSKTPGEFPDVLHSALGL 317
>YGL155w [O] KOG0367 Protein geranylgeranyltransferase Type I beta subunit
Length = 376
Score = 79.0 bits (193), Expect = 9e-15
Identities = 72/278 (25%), Positives = 120/278 (42%), Gaps = 52/278 (18%)
Query: 85 LTTLSGLQILATYNALERLGSEKQEQLEKFILSNQKAD-GSFQ---------GDSFGEVD 134
L L + +L Y E + ++ L +F+ Q+ D GSF G S D
Sbjct: 107 LFALLSMIMLRDYEYFETILDKRS--LARFVSKCQRPDRGSFVSCLDYKTNCGSSVDSDD 164
Query: 135 TRFVYTALSCLSILHKLTKEV------VEPAVSYIL--RCYNFDGGFGLNPEAESHAAQA 186
RF Y A++ L I +KE E + YI+ +CYN G FG + E H+
Sbjct: 165 LRFCYIAVAILYICGCRSKEDFDEYIDTEKLLGYIMSQQCYN--GAFGAHNEP--HSGYT 220
Query: 187 FTCIAALAIVGKLDSLTPAQQENIAVWLSERQVP-------------------EGGLNGR 227
++ LA++ L+ L+ +E+ WL RQV +GG GR
Sbjct: 221 SCALSTLALLSSLEKLSDKFKEDTITWLLHRQVSSHGCMKFESELNASYDQSDDGGFQGR 280
Query: 228 PSKLPDVCYSWWVLSTLSILQKADW---IDFPKLTEFIL-HCQDPKNGGISDRPDNEVDV 283
+K D CY++W L++L +L K DW +T ++L Q GG S + + D+
Sbjct: 281 ENKFADTCYAFWCLNSLHLLTK-DWKMLCQTELVTNYLLDRTQKTLTGGFSKNDEEDADL 339
Query: 284 FHTVFGLGGLSIMKYPGLRDIDPVYCMPYTVTKYFQRK 321
+H+ G L++++ + C+P + F ++
Sbjct: 340 YHSCLGSAALALIE----GKFNGELCIPQEIFNDFSKR 373
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.320 0.139 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,804,700
Number of Sequences: 60738
Number of extensions: 903415
Number of successful extensions: 2055
Number of sequences better than 1.0e-05: 21
Number of HSP's better than 0.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1877
Number of HSP's gapped (non-prelim): 34
length of query: 324
length of database: 30,389,216
effective HSP length: 106
effective length of query: 218
effective length of database: 23,950,988
effective search space: 5221315384
effective search space used: 5221315384
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)