ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV1223 check: MH A KOG0272 RNA processing and modification U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV1223 428278 429654 459
(459 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YPR178w [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 324 1e-88
SPAC227.12 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp... 246 4e-65
Hs4758558 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4... 234 2e-61
At2g41500 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4... 219 5e-57
7293972 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 209 9e-54
CE05372 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 206 5e-53
At2g05720 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4... 110 6e-24
CE02043 [R] KOG0289 mRNA splicing factor 105 1e-22
Hs7657381 [R] KOG0289 mRNA splicing factor 102 1e-21
CE06574 [R] KOG0266 WD40 repeat-containing protein 99 2e-20
SPBC15D4.14 [K] KOG0263 Transcription initiation factor TFIID su... 98 3e-20
CE11748 [R] KOG0266 WD40 repeat-containing protein 95 2e-19
7302603 [R] KOG0289 mRNA splicing factor 95 2e-19
Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp... 94 6e-19
Hs5031817 [D] KOG0267 Microtubule severing protein katanin p80 s... 93 9e-19
Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and... 92 1e-18
YCR084c [R] KOG0266 WD40 repeat-containing protein 92 2e-18
Hs16554627 [R] KOG0266 WD40 repeat-containing protein 91 3e-18
Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and ... 90 6e-18
7290331 [R] KOG0266 WD40 repeat-containing protein 89 1e-17
At1g04510 [R] KOG0289 mRNA splicing factor 89 2e-17
7302720 [R] KOG0266 WD40 repeat-containing protein 87 4e-17
Hs19913371 [B] KOG0273 Beta-transducin family (WD-40 repeat) pro... 86 1e-16
7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 85 2e-16
CE00901 [R] KOG0266 WD40 repeat-containing protein 85 3e-16
Hs9506645 [R] KOG0266 WD40 repeat-containing protein 84 3e-16
SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID su... 84 4e-16
7303687 [K] KOG0263 Transcription initiation factor TFIID subuni... 84 4e-16
At3g49660 [R] KOG0266 WD40 repeat-containing protein 83 8e-16
Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subu... 83 1e-15
At2g33340 [R] KOG0289 mRNA splicing factor 83 1e-15
SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing pro... 82 2e-15
Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) pro... 82 2e-15
CE11192 [A] KOG0291 WD40-repeat-containing subunit of the 18S rR... 82 2e-15
At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 s... 81 3e-15
At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 s... 81 4e-15
7296209 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 81 4e-15
YBR198c [K] KOG0263 Transcription initiation factor TFIID subuni... 80 5e-15
Hs5032159 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 80 5e-15
Hs21071067 [K] KOG0263 Transcription initiation factor TFIID sub... 80 6e-15
Hs20357529 [R] KOG0286 G-protein beta subunit 80 6e-15
At3g18130 [T] KOG0279 G protein beta subunit-like protein 80 6e-15
Hs11055998 [R] KOG0286 G-protein beta subunit 80 8e-15
SPAC630.14c [R] KOG0266 WD40 repeat-containing protein 79 1e-14
CE17845 [R] KOG0286 G-protein beta subunit 79 1e-14
At4g29830 [R] KOG4155 FOG: WD40 repeat 79 1e-14
At4g02730 [R] KOG0266 WD40 repeat-containing protein 79 1e-14
Hs13376840 [R] KOG4155 FOG: WD40 repeat 78 2e-14
At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 s... 78 2e-14
At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 s... 78 2e-14
7292465 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 78 2e-14
Hs21071065 [K] KOG0263 Transcription initiation factor TFIID sub... 78 3e-14
CE02186 [R] KOG0286 G-protein beta subunit 77 4e-14
At1g18080 [T] KOG0279 G protein beta subunit-like protein 77 4e-14
YMR116c [T] KOG0279 G protein beta subunit-like protein 77 5e-14
Hs11321585 [R] KOG0286 G-protein beta subunit 77 7e-14
ECU02g1400 [A] KOG0284 Polyadenylation factor I complex subunit ... 77 7e-14
Hs22052079 [R] KOG0266 WD40 repeat-containing protein 76 9e-14
Hs8922428 [S] KOG0271 Notchless-like WD40 repeat-containing protein 76 1e-13
At2g43770 [A] KOG0265 U5 snRNP-specific protein-like factor and ... 76 1e-13
Hs9257257 [Z] KOG0318 WD40 repeat stress protein/actin interacti... 75 2e-13
Hs4827056 [Z] KOG0318 WD40 repeat stress protein/actin interacti... 75 2e-13
At5g67320 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 75 2e-13
SPBC354.03 [R] KOG0266 WD40 repeat-containing protein 75 2e-13
CE21113 [A] KOG0284 Polyadenylation factor I complex subunit PFS2 75 2e-13
YNL317w [A] KOG0284 Polyadenylation factor I complex subunit PFS2 74 5e-13
YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein 74 5e-13
SPBP22H7.07 [A] KOG0285 Pleiotropic regulator 1 74 5e-13
CE14894 [A] KOG0319 WD40-repeat-containing subunit of the 18S rR... 74 5e-13
7301796 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 74 5e-13
7290895 [R] KOG0286 G-protein beta subunit 74 5e-13
7299285 [R] KOG4155 FOG: WD40 repeat 74 6e-13
7293146 [R] KOG0286 G-protein beta subunit 74 6e-13
7303694 [A] KOG0291 WD40-repeat-containing subunit of the 18S rR... 73 8e-13
At3g21540 [A] KOG0306 WD40-repeat-containing subunit of the 18S ... 73 1e-12
7293756 [R] KOG0286 G-protein beta subunit 73 1e-12
SPBC32H8.07 [R] KOG0286 G-protein beta subunit 72 1e-12
Hs5729852 [R] KOG0286 G-protein beta subunit 72 1e-12
Hs20336270 [R] KOG0286 G-protein beta subunit 72 1e-12
7302979 [S] KOG0295 WD40 repeat-containing protein 72 1e-12
Hs4557741 [S] KOG0295 WD40 repeat-containing protein 72 2e-12
YCR057c [A] KOG0291 WD40-repeat-containing subunit of the 18S rR... 72 2e-12
7300397 [S] KOG0300 WD40 repeat-containing protein 72 2e-12
Hs4504053 [R] KOG0286 G-protein beta subunit 71 3e-12
At1g52360 [U] KOG0276 Vesicle coat complex COPI beta' subunit 71 3e-12
At1g48630 [T] KOG0279 G protein beta subunit-like protein 71 3e-12
CE27713 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 71 4e-12
7292737 [A] KOG0285 Pleiotropic regulator 1 71 4e-12
YBR175w [R] KOG0266 WD40 repeat-containing protein 70 5e-12
SPAC29E6.01 [S] KOG0281 Beta-TrCP (transducin repeats containing... 70 5e-12
Hs4757988 [R] KOG0645 WD40 repeat protein 70 5e-12
Hs16117781 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 70 5e-12
Hs16117779 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 70 5e-12
CE27762 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 70 5e-12
CE25007 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 70 5e-12
CE06090 [T] KOG0279 G protein beta subunit-like protein 70 5e-12
7294830 [K] KOG0263 Transcription initiation factor TFIID subuni... 70 5e-12
At5g25150 [K] KOG0263 Transcription initiation factor TFIID subu... 70 7e-12
YLR222c [A] KOG0319 WD40-repeat-containing subunit of the 18S rR... 69 1e-11
At1g29260 [U] KOG0277 Peroxisomal targeting signal type 2 receptor 69 1e-11
7297305 [T] KOG0279 G protein beta subunit-like protein 69 1e-11
7296695 [A] KOG0284 Polyadenylation factor I complex subunit PFS2 69 1e-11
ECU11g1750 [K] KOG0263 Transcription initiation factor TFIID sub... 69 1e-11
At5g16750 [A] KOG0319 WD40-repeat-containing subunit of the 18S ... 69 1e-11
7303631 [S] KOG0308 Conserved WD40 repeat-containing protein 69 1e-11
CE17294 [S] KOG0271 Notchless-like WD40 repeat-containing protein 69 2e-11
At5g52820 [S] KOG0271 Notchless-like WD40 repeat-containing protein 69 2e-11
SPBC713.04c [A] KOG0291 WD40-repeat-containing subunit of the 18... 68 2e-11
SPAC18B11.10 [R] KOG0266 WD40 repeat-containing protein 68 2e-11
SPAC144.13c [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 a... 68 2e-11
Hs4505731 [U] KOG0277 Peroxisomal targeting signal type 2 receptor 68 2e-11
CE28600 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Sl... 68 2e-11
7303130 [R] KOG0645 WD40 repeat protein 68 2e-11
7298053 [U] KOG0276 Vesicle coat complex COPI beta' subunit 68 2e-11
7295052 [U] KOG0277 Peroxisomal targeting signal type 2 receptor 68 2e-11
SPAC12G12.14c [A] KOG0284 Polyadenylation factor I complex subun... 68 3e-11
Hs5174447 [T] KOG0279 G protein beta subunit-like protein 68 3e-11
At3g15980 [U] KOG0276 Vesicle coat complex COPI beta' subunit 68 3e-11
At1g79990 [U] KOG0276 Vesicle coat complex COPI beta' subunit 68 3e-11
Hs4758032 [U] KOG0276 Vesicle coat complex COPI beta' subunit 67 6e-11
At4g15900 [A] KOG0285 Pleiotropic regulator 1 67 6e-11
At5g64730 [S] KOG0316 Conserved WD40 repeat-containing protein 66 9e-11
At1g49040 [T] KOG2127 Calmodulin-binding protein CRAG contains D... 66 9e-11
SPBC32F12.02 [R] KOG4155 FOG: WD40 repeat 66 1e-10
At5g13480 [A] KOG0284 Polyadenylation factor I complex subunit PFS2 66 1e-10
Hs22043515 [S] KOG0295 WD40 repeat-containing protein 65 2e-10
YPL151c [A] KOG0285 Pleiotropic regulator 1 65 3e-10
Hs19913369 [A] KOG0319 WD40-repeat-containing subunit of the 18S... 65 3e-10
ECU04g1250 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 an... 65 3e-10
CE29560 [S] KOG0300 WD40 repeat-containing protein 64 4e-10
CE26861 [S] KOG0300 WD40 repeat-containing protein 64 4e-10
7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein 64 5e-10
7293188 [D] KOG0267 Microtubule severing protein katanin p80 sub... 64 5e-10
YLR129w [A] KOG0306 WD40-repeat-containing subunit of the 18S rR... 64 6e-10
CE18578 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 64 6e-10
SPAC6B12.15 [T] KOG0279 G protein beta subunit-like protein 63 8e-10
Hs5803221 [A] KOG0306 WD40-repeat-containing subunit of the 18S ... 63 8e-10
Hs18677720 [R] KOG0266 WD40 repeat-containing protein 63 8e-10
ECU07g0750 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 63 8e-10
At2g47990 [S] KOG0310 Conserved WD40 repeat-containing protein 63 8e-10
SPAC821.08c [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 a... 63 1e-09
Hs4759276 [A] KOG0299 U3 snoRNP-associated protein (contains WD4... 63 1e-09
Hs4502477 [S] KOG0281 Beta-TrCP (transducin repeats containing)/... 63 1e-09
Hs16117783 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 63 1e-09
At2g01330 [Z] KOG0318 WD40 repeat stress protein/actin interacti... 63 1e-09
SPBC3D6.12 [A] KOG0306 WD40-repeat-containing subunit of the 18S... 62 1e-09
Hs4505895 [A] KOG0285 Pleiotropic regulator 1 62 1e-09
CE27127 [A] KOG0306 WD40-repeat-containing subunit of the 18S rR... 62 1e-09
At2g16780 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 62 1e-09
At1g71840 [S] KOG0296 Angio-associated migratory cell protein (c... 62 1e-09
SPAC57A10.05c [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 62 2e-09
7300980 [R] KOG4155 FOG: WD40 repeat 62 2e-09
Hs16445438 [R] KOG0644 Uncharacterized conserved protein contain... 62 2e-09
Hs16445436 [R] KOG0644 Uncharacterized conserved protein contain... 62 2e-09
Hs16306498 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 62 2e-09
Hs16306496 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 62 2e-09
Hs16306494 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 62 2e-09
7302082 [A] KOG0640 mRNA cleavage stimulating factor complex; su... 62 2e-09
SPBC577.09 [KL] KOG4283 Transcription-coupled repair protein CSA... 61 3e-09
SPBC31F10.13c [DK] KOG0973 Histone transcription regulator HIRA ... 61 3e-09
SPBC1289.11 [A] KOG0265 U5 snRNP-specific protein-like factor an... 61 3e-09
Hs18874090 [S] KOG0308 Conserved WD40 repeat-containing protein 61 3e-09
At3g18060 [Z] KOG0318 WD40 repeat stress protein/actin interacti... 61 3e-09
At3g16650 [A] KOG0285 Pleiotropic regulator 1 61 3e-09
7290520 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and A... 61 3e-09
Hs7705377 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and... 61 4e-09
Hs13375690 [Z] KOG1445 Tumor-specific antigen (contains WD repeats) 61 4e-09
ECU01g1300 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 61 4e-09
At3g44530 [DK] KOG0973 Histone transcription regulator HIRA WD r... 61 4e-09
YOR212w [R] KOG0286 G-protein beta subunit 60 5e-09
At5g15550 [Z] KOG0313 Microtubule binding protein YTM1 (contains... 60 5e-09
7300706 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Sl... 60 5e-09
Hs4826956 [A] KOG0291 WD40-repeat-containing subunit of the 18S ... 60 7e-09
CE11944 [Z] KOG0318 WD40 repeat stress protein/actin interacting... 60 7e-09
At4g35050 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 60 7e-09
SPBC244.03 [U] KOG0276 Vesicle coat complex COPI beta' subunit 60 9e-09
Hs8922679 [R] KOG0275 Conserved WD40 repeat-containing protein 60 9e-09
Hs20548461 [R] KOG0644 Uncharacterized conserved protein contain... 60 9e-09
CE29339 [S] KOG0295 WD40 repeat-containing protein 60 9e-09
CE20709 [R] KOG1538 Uncharacterized conserved protein WDR10 cont... 60 9e-09
At4g33270 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and... 60 9e-09
At4g33260 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and... 60 9e-09
Hs17434629 [ABO] KOG1446 Histone H3 (Lys4) methyltransferase com... 59 1e-08
At5g50120 [R] KOG4155 FOG: WD40 repeat 59 1e-08
SPBC713.05 [S] KOG0316 Conserved WD40 repeat-containing protein 59 2e-08
Hs5032027 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 59 2e-08
Hs13899346 [R] KOG0302 Ribosome Assembly protein 59 2e-08
CE03924 [Z] KOG0318 WD40 repeat stress protein/actin interacting... 59 2e-08
At5g54520 [S] KOG0282 mRNA splicing factor 59 2e-08
SPAC4D7.05 [JT] KOG0643 Translation initiation factor 3 subunit ... 59 2e-08
ECU08g1110 [T] KOG0279 G protein beta subunit-like protein 59 2e-08
At2g21390 [U] KOG0292 Vesicle coat complex COPI alpha subunit 59 2e-08
7292122 [U] KOG0292 Vesicle coat complex COPI alpha subunit 59 2e-08
Hs4885105 [BL] KOG1009 Chromatin assembly complex 1 subunit B/CA... 58 3e-08
Hs19705568 [R] KOG0288 WD40 repeat protein TipD 58 3e-08
Hs14150114 [S] KOG0316 Conserved WD40 repeat-containing protein 58 3e-08
CE18408 [R] KOG4155 FOG: WD40 repeat 58 3e-08
YNL006w [R] KOG0315 G-protein beta subunit-like protein (contain... 58 3e-08
Hs4506439 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 58 3e-08
CE20751 [S] KOG0308 Conserved WD40 repeat-containing protein 58 3e-08
CE16234 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 58 3e-08
CE03286 [S] KOG0308 Conserved WD40 repeat-containing protein 58 3e-08
At4g34460 [R] KOG0286 G-protein beta subunit 58 3e-08
At1g15440 [A] KOG0291 WD40-repeat-containing subunit of the 18S ... 58 3e-08
7299974 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 58 3e-08
SPCC16A11.02 [A] KOG0319 WD40-repeat-containing subunit of the 1... 57 4e-08
SPAC9G1.05 [Z] KOG0318 WD40 repeat stress protein/actin interact... 57 4e-08
SPAC25H1.08c [S] KOG0296 Angio-associated migratory cell protein... 57 4e-08
Hs7656991 [Z] KOG0303 Actin-binding protein Coronin contains WD4... 57 4e-08
Hs18599374 [Z] KOG0313 Microtubule binding protein YTM1 (contain... 57 4e-08
ECU05g0220 [A] KOG0319 WD40-repeat-containing subunit of the 18S... 57 4e-08
CE23942 [A] KOG0299 U3 snoRNP-associated protein (contains WD40 ... 57 4e-08
7301145 [R] KOG0644 Uncharacterized conserved protein contains W... 57 4e-08
7300370 [A] KOG0306 WD40-repeat-containing subunit of the 18S rR... 57 4e-08
7291689 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and A... 57 4e-08
HsM8923075 [R] KOG0266 WD40 repeat-containing protein 57 6e-08
At4g05410 [A] KOG0299 U3 snoRNP-associated protein (contains WD4... 57 6e-08
7302218 [R] KOG0302 Ribosome Assembly protein 57 6e-08
7300458 [R] KOG0275 Conserved WD40 repeat-containing protein 57 6e-08
CE20251_2 [U] KOG0276 Vesicle coat complex COPI beta' subunit 57 6e-08
YMR131c [R] KOG0302 Ribosome Assembly protein 57 8e-08
YKR036c [R] KOG4155 FOG: WD40 repeat 57 8e-08
Hs8923881 [R] KOG0266 WD40 repeat-containing protein 57 8e-08
Hs16445424 [Z] KOG0313 Microtubule binding protein YTM1 (contain... 57 8e-08
CE25232 [S] KOG0310 Conserved WD40 repeat-containing protein 57 8e-08
CE01695 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and A... 57 8e-08
YDR267c [R] KOG0645 WD40 repeat protein 56 1e-07
Hs21361641 [R] KOG0266 WD40 repeat-containing protein 56 1e-07
At1g80710 [S] KOG4328 WD40 protein 56 1e-07
At1g62020 [U] KOG0292 Vesicle coat complex COPI alpha subunit 56 1e-07
At1g10580 [S] KOG0282 mRNA splicing factor 56 1e-07
7297878 [K] KOG1034 Transcriptional repressor EED/ESC/FIE requir... 56 1e-07
YDL145c [U] KOG0292 Vesicle coat complex COPI alpha subunit 56 1e-07
SPAP17D4.01 [U] KOG0277 Peroxisomal targeting signal type 2 rece... 56 1e-07
Hs19923529 [A] KOG0284 Polyadenylation factor I complex subunit ... 56 1e-07
CE11860 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 56 1e-07
CE09819 [K] KOG0263 Transcription initiation factor TFIID subuni... 56 1e-07
At5g53500 [S] KOG0283 WD40 repeat-containing protein 56 1e-07
At1g73720 [R] KOG0275 Conserved WD40 repeat-containing protein 56 1e-07
7303841 [A] KOG0319 WD40-repeat-containing subunit of the 18S rR... 56 1e-07
Hs7108333_2 [R] KOG4155 FOG: WD40 repeat 56 1e-07
YBR103w [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 55 2e-07
SPCC1672.10 [B] KOG0264 Nucleosome remodeling factor subunit CAF... 55 2e-07
CE05533 [A] KOG0285 Pleiotropic regulator 1 55 2e-07
SPBC1198.12 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 a... 55 2e-07
HsM4827028 [B] KOG0639 Transducin-like enhancer of split protein... 55 2e-07
Hs4758030 [U] KOG0292 Vesicle coat complex COPI alpha subunit 55 2e-07
Hs4503513 [JT] KOG0643 Translation initiation factor 3 subunit i... 55 2e-07
Hs21541824 [B] KOG0639 Transducin-like enhancer of split protein... 55 2e-07
CE03274 [A] KOG0640 mRNA cleavage stimulating factor complex; su... 55 2e-07
At5g02430 [S] KOG0283 WD40 repeat-containing protein 55 2e-07
At4g21130 [A] KOG0299 U3 snoRNP-associated protein (contains WD4... 55 2e-07
YPL183c [R] KOG0974 WD-repeat protein WDR6 WD repeat superfamily 55 3e-07
7290304 [S] KOG0310 Conserved WD40 repeat-containing protein 55 3e-07
SPBC2G2.18 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 54 4e-07
Hs13491164 [U] KOG1332 Vesicle coat complex COPII subunit SEC13 54 4e-07
ECU11g1970 [A] KOG0285 Pleiotropic regulator 1 54 4e-07
ECU01g1290 [U] KOG0292 Vesicle coat complex COPI alpha subunit 54 4e-07
At3g18860 [I] KOG0301 Phospholipase A2-activating protein (conta... 54 4e-07
7298293 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and A... 54 4e-07
Hs22048320 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 54 5e-07
Hs20149592 [I] KOG0278 Serine/threonine kinase receptor-associat... 54 5e-07
SPBC21B10.05c [R] KOG0315 G-protein beta subunit-like protein (c... 54 6e-07
Hs5902134 [Z] KOG0303 Actin-binding protein Coronin contains WD4... 54 6e-07
Hs20143912 [R] KOG0266 WD40 repeat-containing protein 54 6e-07
At5g56130 [S] KOG1407 WD40 repeat protein 54 6e-07
At5g27570 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and... 54 6e-07
At4g03020 [R] KOG0266 WD40 repeat-containing protein 54 6e-07
At2g19430 [R] KOG0649 WD40 repeat protein 54 6e-07
7297759 [Z] KOG0313 Microtubule binding protein YTM1 (contains W... 54 6e-07
YFL009w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 53 8e-07
SPAC29A4.18 [B] KOG0264 Nucleosome remodeling factor subunit CAF... 53 8e-07
Hs7662430 [S] KOG0300 WD40 repeat-containing protein 53 8e-07
Hs7662364 [R] KOG0641 WD40 repeat protein 53 8e-07
Hs18550925 [S] KOG0295 WD40 repeat-containing protein 53 8e-07
At5g50230 [R] KOG0288 WD40 repeat protein TipD 53 8e-07
At5g43920 [S] KOG0293 WD40 repeat-containing protein 53 8e-07
At2g32700 [R] KOG0266 WD40 repeat-containing protein 53 8e-07
At1g80670 [A] KOG0647 mRNA export protein (contains WD40 repeats) 53 8e-07
At1g49450 [R] KOG4155 FOG: WD40 repeat 53 8e-07
7294479 [Z] KOG0318 WD40 repeat stress protein/actin interacting... 53 8e-07
HsM11641233 [R] KOG0315 G-protein beta subunit-like protein (con... 53 1e-06
7296910 [JT] KOG0643 Translation initiation factor 3 subunit i (... 53 1e-06
Hs4506399 [A] KOG0647 mRNA export protein (contains WD40 repeats) 52 1e-06
CE21405 [R] KOG0645 WD40 repeat protein 52 1e-06
At4g11920 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and... 52 1e-06
7303739 [BL] KOG1009 Chromatin assembly complex 1 subunit B/CAC2... 52 1e-06
7296283 [R] KOG1273 WD40 repeat protein 52 1e-06
SPBC16A3.05c [A] KOG0647 mRNA export protein (contains WD40 repe... 52 2e-06
Hs4557467 [KL] KOG4283 Transcription-coupled repair protein CSA ... 52 2e-06
At3g15610 [I] KOG0278 Serine/threonine kinase receptor-associate... 52 2e-06
At2g46290 [JT] KOG0643 Translation initiation factor 3 subunit i... 52 2e-06
At1g24130 [R] KOG4155 FOG: WD40 repeat 52 2e-06
Hs4502123_2 [R] KOG4155 FOG: WD40 repeat 52 2e-06
YDR364c [S] KOG0282 mRNA splicing factor 52 2e-06
Hs4758934 [I] KOG0301 Phospholipase A2-activating protein (conta... 52 2e-06
Hs22064139 [R] KOG0288 WD40 repeat protein TipD 52 2e-06
Hs22048015 [R] KOG0266 WD40 repeat-containing protein 52 2e-06
Hs21361908 [R] KOG0315 G-protein beta subunit-like protein (cont... 52 2e-06
Hs20127645 [R] KOG0266 WD40 repeat-containing protein 52 2e-06
At3g53390 [R] KOG2394 WD40 protein DMR-N9 52 2e-06
At2g26060 [R] KOG0645 WD40 repeat protein 52 2e-06
HsM6005894_2 [R] KOG4155 FOG: WD40 repeat 52 2e-06
Hs21536371_2 [R] KOG4155 FOG: WD40 repeat 52 2e-06
SPAC4D7.03 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 51 3e-06
Hs6912356 [S] KOG2106 Uncharacterized conserved protein contains... 51 3e-06
Hs4557491 [A] KOG0640 mRNA cleavage stimulating factor complex; ... 51 3e-06
CE27149 [S] KOG0316 Conserved WD40 repeat-containing protein 51 3e-06
At5g58230 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 51 3e-06
At5g08560 [S] KOG0293 WD40 repeat-containing protein 51 3e-06
YKL021c [S] KOG0294 WD40 repeat-containing protein 51 4e-06
YJL112w [R] KOG4155 FOG: WD40 repeat 51 4e-06
SPBC215.15 [U] KOG1332 Vesicle coat complex COPII subunit SEC13 51 4e-06
SPAC31A2.14 [S] KOG0308 Conserved WD40 repeat-containing protein 51 4e-06
Hs6912360 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 51 4e-06
Hs22046076 [R] KOG0266 WD40 repeat-containing protein 51 4e-06
Hs17462432 [I] KOG1933 Cholesterol transport protein (Niemann-Pi... 51 4e-06
Hs14149734 [Z] KOG0303 Actin-binding protein Coronin contains WD... 51 4e-06
Hs11128017 [D] KOG0642 Cell-cycle nuclear protein contains WD-40... 51 4e-06
ECU01g0610 [BK] KOG1063 RNA polymerase II elongator complex subu... 51 4e-06
CE23620 [R] KOG0266 WD40 repeat-containing protein 51 4e-06
CE09086 [R] KOG0266 WD40 repeat-containing protein 51 4e-06
At5g64630 [BL] KOG1009 Chromatin assembly complex 1 subunit B/CA... 51 4e-06
At5g42010 [S] KOG0283 WD40 repeat-containing protein 51 4e-06
At5g27940 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and... 51 4e-06
At3g10530 [A] KOG1272 WD40-repeat-containing subunit of the 18S ... 51 4e-06
At2g46280 [JT] KOG0643 Translation initiation factor 3 subunit i... 51 4e-06
7300991 [U] KOG1332 Vesicle coat complex COPII subunit SEC13 51 4e-06
YLR429w [Z] KOG0303 Actin-binding protein Coronin contains WD40 ... 50 5e-06
YLR409c [R] KOG1539 WD repeat protein 50 5e-06
YER107c [A] KOG0647 mRNA export protein (contains WD40 repeats) 50 5e-06
Hs20534409 [S] KOG2106 Uncharacterized conserved protein contain... 50 5e-06
CE25603 [JT] KOG0643 Translation initiation factor 3 subunit i (... 50 5e-06
At5g49430 [R] KOG0644 Uncharacterized conserved protein contains... 50 5e-06
At4g34380 [R] KOG4155 FOG: WD40 repeat 50 5e-06
At2g22040 [R] KOG0315 G-protein beta subunit-like protein (conta... 50 5e-06
7302600 [R] KOG4155 FOG: WD40 repeat 50 5e-06
SPBC6B1.10 [S] KOG0282 mRNA splicing factor 50 7e-06
Hs22043408 [JT] KOG0643 Translation initiation factor 3 subunit ... 50 7e-06
CE15742 [R] KOG0275 Conserved WD40 repeat-containing protein 50 7e-06
At5g54200 [S] KOG0283 WD40 repeat-containing protein 50 7e-06
At5g13840 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and... 50 7e-06
At4g04940 [R] KOG1539 WD repeat protein 50 7e-06
7291600 [I] KOG0278 Serine/threonine kinase receptor-associated ... 50 7e-06
YOR272w [Z] KOG0313 Microtubule binding protein YTM1 (contains W... 50 9e-06
YGL137w [U] KOG0276 Vesicle coat complex COPI beta' subunit 50 9e-06
Hs14149987 [S] KOG0269 WD40 repeat-containing protein 50 9e-06
At2g19540 [R] KOG0302 Ribosome Assembly protein 50 9e-06
7301821 [S] KOG0269 WD40 repeat-containing protein 50 9e-06
7297895 [K] KOG1034 Transcriptional repressor EED/ESC/FIE requir... 50 9e-06
>YPR178w [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 465
Score = 324 bits (831), Expect = 1e-88
Identities = 183/470 (38%), Positives = 277/470 (58%), Gaps = 24/470 (5%)
Query: 2 VELDDLQVDVDYKNQ-DGQSVGDALKRLEFQR-QERLKIVPTLDTDVRRALELVGEPVDI 59
+ L++L VD+ +K +S D LK+L +R Q L+ +P D +VRR L ++ +P +
Sbjct: 5 IALENLPVDLQHKGATQNESTADILKQLPHERLQAVLEKIPEEDLEVRRLLSILKKPEVV 64
Query: 60 AGEDNYSRRDRLSDLILSDPKARERVTRLVESTSKDQTKIDTERSKVDDEDEE-FYTPAS 118
ED RR RL+++++ D E + + ++ VD+ED+E F+TPA+
Sbjct: 65 ENEDVQQRRIRLAEILMVDEIDLENINNMENINGEE----------VDEEDDEDFFTPAT 114
Query: 119 QQLIEMRKFLIIYSMQRSKXXXXXXXXXXVSQNVKNVISKRRDLESKLKQFSLKGMQVID 178
+LI R+FLI YS++RS+ N + + RR ++ L G Q++
Sbjct: 115 SELIFARRFLINYSLERSRKRLQKEMERHQKFNTRQELLSRRTELQRMANLELAGSQLVS 174
Query: 179 EKPISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGT-KISGLDWSVDSKNIF 237
KPIS ++ S ++A GSW+G+L ++++ + + S KI +DW DS N
Sbjct: 175 TKPISAVSLSTDDMVVATGSWAGDLQVLNSQTLQPLTQKLDSHVGKIGAIDWHPDSNNQM 234
Query: 238 V-CTHDGRIVIYD-SGDETTVKIL---YKNDARFAQVRCHPCNSFIGSTSFDKTWILIDT 292
+ C DG I + S +E +++L ++ R + V+ HP FIGS S D TW L D
Sbjct: 235 ISCAEDGLIKNFQYSNEEGGLRLLGDLVGHERRISDVKYHPSGKFIGSASHDMTWRLWDA 294
Query: 293 VKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYS 352
+L+QEGH VFSLSF DGSLV + G+D+++++WDIRSG +M+L GHSKPIY+
Sbjct: 295 STHQELLLQEGHDKGVFSLSFQCDGSLVCSGGMDSLSMLWDIRSGSKVMTLAGHSKPIYT 354
Query: 353 VDWSQNGYQLASGSGDGTIKVWDIRKK--GNVETILAHNSIVSQVKFNKQNGG-YLVSSG 409
V WS NGYQ+A+G GDG I VWDIRK+ G + ILAH +IV+QV+F+K++GG LVS G
Sbjct: 355 VAWSPNGYQVATGGGDGIINVWDIRKRDEGQLNQILAHRNIVTQVRFSKEDGGKKLVSCG 414
Query: 410 YDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPD--IYSAGWDRSVNKW 457
YD +N+++ W+K SL GH DK++S+DI + S GWDRS+ W
Sbjct: 415 YDNLINVYSSDTWLKMGSLAGHTDKIISLDISNNSHFLVSGGWDRSIKLW 464
>SPAC227.12 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 462
Score = 246 bits (629), Expect = 4e-65
Identities = 149/442 (33%), Positives = 242/442 (54%), Gaps = 28/442 (6%)
Query: 29 EFQRQERLKI--VPTLDTDVRRALELVGEPVDIAGEDNYSRRDRLSDLILSDPKARERVT 86
E + ++R+K +P D+ VR L GEP+ GED +RR RL L
Sbjct: 34 EQKEKDRIKALKIPYEDSKVREYLRRYGEPITYFGEDALARRQRLQQL------------ 81
Query: 87 RLVESTSKDQTKIDTERSKVDDEDEEFYTPASQQLIEMRKFLIIYSMQRSKXXXXXXXXX 146
++E + + +D ++ ++ ++E Y S +L+ RK + +YS++++K
Sbjct: 82 -MIEKSLEGDNPLDVDQGASENIEKETYVQGSHELLVARKKIALYSLEKAKLRLKKEREI 140
Query: 147 XVSQNVKNVISKRRDLESKLKQFSLKGMQVIDEKPISEINTSPGGDLMACGSWSGNLSLV 206
+ V+S + +E L++ L G Q+ E+PI+ + S G+ A GSW G + +
Sbjct: 141 SEIPVPEIVLSGKSSIEH-LQKAELMGSQIGGERPIAIVRFSNNGNHFASGSWGGQVKVW 199
Query: 207 DN-SLSKIYCNRSLSGTKISGLDW-------SVDSKNIFVCTH--DGRIVIYDSGDETTV 256
++ +LS++ R + ++SGLDW DS+ + + T D + ++ + T +
Sbjct: 200 NSDNLSEVQLFRGHTD-RVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPL 258
Query: 257 KILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHND 316
L + AR +V HP ++ S SFD TW L D +L+QEGHS +FS++ D
Sbjct: 259 LRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPD 318
Query: 317 GSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDI 376
GSLVS+ G DAI IWD+RSGK+IM L H + I ++ WS NGYQLA+ S D T+K+WD+
Sbjct: 319 GSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDL 378
Query: 377 RKKGNVETILAHNSIVSQVKFNKQN-GGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKV 435
RK TI AH+S+VS V++ + ++ +SGYD V ++N N +S+ GH +KV
Sbjct: 379 RKVSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLWNPLNCSLIKSMVGHEEKV 438
Query: 436 MSIDIVGPDIYSAGWDRSVNKW 457
MS+D G S+G+DR++ W
Sbjct: 439 MSVDGYGDRFISSGYDRTIKLW 460
>Hs4758558 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 522
Score = 234 bits (598), Expect = 2e-61
Identities = 144/444 (32%), Positives = 232/444 (51%), Gaps = 28/444 (6%)
Query: 29 EFQRQERLKI--VPTLDTDVRRALELVGEPVDIAGEDNYSRRDRLSDLILSDPKARERVT 86
EF+R++R + V T D++V+ L +GEP+ + GE RR+RL +++
Sbjct: 89 EFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL----------- 137
Query: 87 RLVESTSKDQTKIDTERSKVDDED--EEFYTPASQQLIEMRKFLIIYSMQRS-KXXXXXX 143
+V + + +TK D E+SK E+ + +Y L R ++ YS+ R+ K
Sbjct: 138 SVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWIANYSLPRAMKRLEEAR 197
Query: 144 XXXXVSQNVKNVISKRRDLESKLKQFSLKGMQVIDEKPISEINTSPGGDLMACGSWSGNL 203
+ + + S+ ++L L+ + Q+ D++PIS + SP ++A WSG
Sbjct: 198 LHKEIPETTRT--SQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLC 255
Query: 204 SLVDNSLSKIYCNRSLSGTKISGLDW------SVDSK--NIFVCTHDGRIVIYDSGDETT 255
L + T + + + S+D K N+ C DG + ++ +
Sbjct: 256 KLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEP 315
Query: 256 VKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHN 315
V + + R A+V HP F+G+T +D++W L D Q IL QEGHS V+ ++FH
Sbjct: 316 VADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQ 375
Query: 316 DGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWD 375
DGSL T GLDA +WD+R+G+ IM L+GH K IY +++S NGY +A+GSGD T KVWD
Sbjct: 376 DGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWD 435
Query: 376 IRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKV 435
+R++ V TI AH ++V+ VKF +G +L++ YD I+ W ++L GH KV
Sbjct: 436 LRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKV 495
Query: 436 MSIDIV--GPDIYSAGWDRSVNKW 457
M +DI G I + +DR+ W
Sbjct: 496 MGLDISSDGQLIATCSYDRTFKLW 519
>At2g41500 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 554
Score = 219 bits (559), Expect = 5e-57
Identities = 144/470 (30%), Positives = 252/470 (52%), Gaps = 31/470 (6%)
Query: 3 ELDDLQVDVDYKNQDGQSVGD-ALKRLEFQRQERLKIVPTLDTDVRRALELVGEPVDIAG 61
E DD +++ +++ + + AL+ L +R+ VPT D VR L +GEP+ + G
Sbjct: 82 ESDDEHIEISEESKQVRERQEKALQDLLVKRRAAAMAVPTNDKAVRDRLRRLGEPITLFG 141
Query: 62 EDNYSRRDRLSDLILSDPKARERVTRLVESTSKDQTKIDTERSKVDDEDEE--FYTPASQ 119
E RR RL+ L+ R + ++ KD + T + +VDDE E F+T +
Sbjct: 142 EQEMERRARLTQLL-----TRYDINGQLDKLVKDHEEDVTPKEEVDDEVLEYPFFTEGPK 196
Query: 120 QLIEMRKFLIIYSMQRSKXXXXXXXXXXVSQNVKNVISKRRDLESK-----LKQFSLKGM 174
+L E R + +S++R+ ++ ++ + D E+K K +L
Sbjct: 197 ELREARIEIAKFSVKRAAVRIQR------AKRRRDDPDEDMDAETKWALKHAKHMALDCS 250
Query: 175 QVIDEKPISEINTSPGGDLMACGSWSGNLSL-----VDNSLSKIYCNRSLSGTKISGLDW 229
D++P++ + S G ++A S SG L V N+++ + ++ + + + +
Sbjct: 251 NFGDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKE----RATDVVF 306
Query: 230 SVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWIL 289
S + + D ++ + D T ++ + R A+V HP ++G+TS+DKTW L
Sbjct: 307 SPVDDCLATASADRTAKLWKT-DGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRL 365
Query: 290 IDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKP 349
D A +L+QEGHS V+ ++F DG+L ++ GLD++A +WD+R+G++I+ QGH KP
Sbjct: 366 WDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKP 425
Query: 350 IYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSG 409
++SV++S NGY LASG D ++WD+R + ++ I AH ++VSQVK+ Q G +L ++
Sbjct: 426 VFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATAS 485
Query: 410 YDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPD--IYSAGWDRSVNKW 457
YD KVNI++ ++ +SL GH KV S+DI I + DR++ W
Sbjct: 486 YDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
>7293972 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 553
Score = 209 bits (531), Expect = 9e-54
Identities = 139/467 (29%), Positives = 237/467 (49%), Gaps = 30/467 (6%)
Query: 8 QVDVDYKNQDGQSVGDALKRLE-FQRQERLKI--VPTLDTDVRRALELVGEPVDIAGEDN 64
++D DY + + + D + LE F+R++R + V T DT+++ L + EP+ GE
Sbjct: 96 KIDDDYFDLEMEMERDKVALLEEFERKKRARQINVSTDDTEIKSNLRQLNEPICYFGEGP 155
Query: 65 YSRRDRLSDLILSDPKARERVTRLVESTSKDQTKIDTERSKVDDEDEE--FYTPASQQLI 122
RR RL +L+ L E+ + D ER + E ++ +Y L
Sbjct: 156 AERRRRLKELLAG----------LGENAINKRQYEDEERKQQQREQDQATWYHEGPDSLR 205
Query: 123 EMRKFLIIYSMQRSKXXXXXXXXXXVSQNVKNVISKRRDLESKLKQFSLKGMQVIDEKPI 182
R +L YS+ R+K + + +++ KL+ + QV D +P+
Sbjct: 206 IARLWLADYSLPRAKDRLVRAREALEVPSAARA-GRMVEMQKKLQSLAPLCSQVGDTRPV 264
Query: 183 SEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSG--TKISGLDW----SVDSKNI 236
S S L+ SWSG L S+ ++L G + + G+ D +N+
Sbjct: 265 SSAAFSEDSSLLLTSSWSGLCKLW--SVPDCELKQTLRGHASYVGGVALRPGVKADEENV 322
Query: 237 FVCT---HDGRIVIYD-SGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDT 292
HDG + ++ + +E+ I R ++V HP F+ + +D +W L D
Sbjct: 323 VAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDL 382
Query: 293 VKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYS 352
++ +L QEGH+ V LS+H+DGS++ T GLDA +WD+R+G+ IM L+GH ++
Sbjct: 383 EQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFG 442
Query: 353 VDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDK 412
VD+S NG+ +A+GS D T K+WD+R++ V TI AH +++S VK+ ++ G +LV+ YD
Sbjct: 443 VDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDS 502
Query: 413 KVNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIYSA--GWDRSVNKW 457
I+++ W ++L+GH +KV+S+DI Y A +DR+ W
Sbjct: 503 TTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLW 549
>CE05372 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 496
Score = 206 bits (525), Expect = 5e-53
Identities = 129/451 (28%), Positives = 231/451 (50%), Gaps = 31/451 (6%)
Query: 23 DALKRLEFQRQERLKIV--PTLDTDVRRALELVGEPVDIAGEDNYSRRDRLSDLILSDPK 80
DA EF R+ R + + PT D V+ L + +P+ + GED RR+RL L+
Sbjct: 56 DAEMFAEFDRRRRARTLTLPTDDVQVKLKLRALNQPICLFGEDALDRRERLRALL--STM 113
Query: 81 ARERVTRLVESTSKDQTKIDTERSKVDDEDEEFYTPASQQLIEMRKFLIIYSMQRSKXXX 140
+ + + ++ + D+ D K D+E +Y +L R + +S++++K
Sbjct: 114 SEDEIAAVLHT---DEVNAD----KADEETVTWYHRGPIELRMARVSIADFSLRKAKLRL 166
Query: 141 XXXXXXXVSQNVKNVISKRRDLESKLKQFSLKGMQVIDEKPISEINTSPGGDLMACGSWS 200
+ ++ R++ ++Q +L QV D +P++ S + + WS
Sbjct: 167 DKAREEAARPAHEKALA-RQEAHKWVQQINLHASQVADTRPVAFCEFSADSEHIVTAGWS 225
Query: 201 GNLSLVDNS-----------LSKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYD 249
G++++ S+ C R G + D+S S N+ C++DG ++++
Sbjct: 226 GSVAVWKREQCAQEIKFIGHSSQAGCARFHPGA-FTQNDYS--SLNVVSCSYDGTVLLWS 282
Query: 250 SGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVF 309
E+ + L ++ R ++V HP + + FD TW + D + +L QEGHS V
Sbjct: 283 LSQESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTWRMYDLTTKKELLYQEGHSKSVA 342
Query: 310 SLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDG 369
++FH DGS+ T G D +WD+R+G+ IM L GH+K I+SV+W NGY++ +GS D
Sbjct: 343 DVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEMITGSSDN 402
Query: 370 TIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLE 429
++KVWD+R + N T+ AH S+V++V+ + G YLVS+ +D + +++ W R L+
Sbjct: 403 SMKVWDLRMRRNTYTMPAHTSVVTRVRADAA-GQYLVSASFDCTLKMWSTTGWQPLRQLQ 461
Query: 430 GHLDKVMSIDIVGPD---IYSAGWDRSVNKW 457
GH +++ +DI PD + S+ +DR+ W
Sbjct: 462 GHDTRILCVDI-SPDGQWMCSSAFDRTFKLW 491
>At2g05720 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 276
Score = 110 bits (274), Expect = 6e-24
Identities = 54/129 (41%), Positives = 84/129 (64%), Gaps = 4/129 (3%)
Query: 316 DGSLVST----AGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTI 371
DG+L+ T +G D++A +WD+R+ +NI+ QGH K + SVD+S NGY LASG D
Sbjct: 137 DGTLLQTFKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQC 196
Query: 372 KVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGH 431
++WD+R + + I AH ++VSQVK+ Q +L ++ +D VNI++ ++ +SL GH
Sbjct: 197 RIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGH 256
Query: 432 LDKVMSIDI 440
KV S+DI
Sbjct: 257 ESKVASLDI 265
Score = 57.4 bits (137), Expect = 4e-08
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 27/251 (10%)
Query: 153 KNVISKRRDLESKL-----KQFSLKGMQVIDEKPISEINTSPGGDLMACGSWSGNLSL-- 205
+N + ++ E+KL K L + D++P++ + S G ++ S SG L
Sbjct: 32 RNDPDEDKNAETKLALKHCKDMVLGSSKFGDDRPLTGCSLSRDGKILVTCSLSGVPKLWE 91
Query: 206 VDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDAR 265
V +KI L G K D + + D + S D T + ++K D
Sbjct: 92 VPQVTNKIVV---LKGHKEHVTD-------VVFSSVDDECLATASTDRT--EKIWKTDGT 139
Query: 266 FAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGL 325
Q +F S+ FD + D ILI +GH +V S+ F +G +++ G
Sbjct: 140 LLQ-------TFKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGE 192
Query: 326 DAIALIWDIRSGKNIMSLQGHSKPIYSVDWS-QNGYQLASGSGDGTIKVWDIRKKGNVET 384
D IWD+R K + + H + V + Q Y LA+ S D + +W R V++
Sbjct: 193 DNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKS 252
Query: 385 ILAHNSIVSQV 395
++ H S V+ +
Sbjct: 253 LVGHESKVASL 263
>CE02043 [R] KOG0289 mRNA splicing factor
Length = 509
Score = 105 bits (262), Expect = 1e-22
Identities = 100/430 (23%), Positives = 181/430 (41%), Gaps = 30/430 (6%)
Query: 14 KNQDGQSVGDALKRLEFQRQERLKIVPTLDTDVRRALELVGEPVDIAGEDNYSRRDRLSD 73
+N G S+ LK L Q+ V +R+ L++ + + + + + +S
Sbjct: 82 RNVSGTSIPSLLKML----QDEWDTVMLNSFSLRQQLQIARQELSHSLYQHDAACRVISR 137
Query: 74 LILSDPKARERVTRLVESTSKDQTKIDTERSKVDDEDEEFYTPAS-QQLIEMRKFLIIYS 132
L ARE ++ L TS K+D + S + ED++ + A +L E K L
Sbjct: 138 LSKELTAAREALSTLKPHTS---AKVDDDVSIDESEDQQGLSEAILAKLEEKSKSLTAER 194
Query: 133 MQRSKXXXXXXXXXXVSQNVKNVISKRRDLESKLKQFSLKGMQVIDEKPISEINTSPGGD 192
QR K N+ ++K +L + S G+ I+ ++ G+
Sbjct: 195 KQRGK-------------NLPEGLAKTEELAELKQTASHTGIHSTGTPGITALDIK--GN 239
Query: 193 LMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYDSGD 252
L G + L D ++ KI+ + D+ + D I ++ + D
Sbjct: 240 LSLTGGIDKTVVLYDYEKEQVMQTFKGHNKKINAVVLHPDNITAISASADSHIRVWSATD 299
Query: 253 ETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDT---VKQAPILIQEGHSAEVF 309
++ I+ + A + + +I S S D W D + ++ G V
Sbjct: 300 SSSKAIIDVHQAPVTDISLNASGDYILSASDDSYWAFSDIRSGKSLCKVSVEPGSQIAVH 359
Query: 310 SLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDG 369
S+ FH DG + T DA+ IWD+++ + GH+ + S+ +S+NGY LA+GS DG
Sbjct: 360 SIEFHPDGLIFGTGAADAVVKIWDLKNQTVAAAFPGHTAAVRSIAFSENGYYLATGSEDG 419
Query: 370 TIKVWDIRKKGNVETIL-AHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSL 428
+K+WD+RK N++T ++ + F+ G +L G +KV + + +W + SL
Sbjct: 420 EVKLWDLRKLKNLKTFANEEKQPINSLSFD-MTGTFLGIGG--QKVQVLHVKSWSEVVSL 476
Query: 429 EGHLDKVMSI 438
H V +
Sbjct: 477 SDHSGPVTGV 486
>Hs7657381 [R] KOG0289 mRNA splicing factor
Length = 504
Score = 102 bits (254), Expect = 1e-21
Identities = 76/303 (25%), Positives = 136/303 (44%), Gaps = 11/303 (3%)
Query: 156 ISKRRDLESK--LKQFSLKGMQVIDEKPISEINTSPGGDLMACGSWSGNLSLVDNSLSKI 213
+SK R + S L S+ G+ +D P S+ N + G N+ + D S +I
Sbjct: 204 LSKYRQVASHVGLHSASIPGILALDLCP-SDTNK------ILTGGADKNVVVFDKSSEQI 256
Query: 214 YCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHP 273
K++ + + +F + D I I+ + + V+++ +++ + H
Sbjct: 257 LATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHA 316
Query: 274 CNSFIGSTSFDKTWILID--TVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALI 331
++ S+S D+ W D T + + E + FH DG + T +D+ I
Sbjct: 317 TGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKI 376
Query: 332 WDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSI 391
WD++ N+ + GHS PI S+ +S+NGY LA+ + D ++K+WD+RK N +T+ N+
Sbjct: 377 WDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNF 436
Query: 392 VSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWD 451
+ Q+G YL G D ++ I I + L ++ I S G D
Sbjct: 437 EVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIASTGMD 496
Query: 452 RSV 454
RS+
Sbjct: 497 RSL 499
>CE06574 [R] KOG0266 WD40 repeat-containing protein
Length = 501
Score = 98.6 bits (244), Expect = 2e-20
Identities = 77/291 (26%), Positives = 135/291 (45%), Gaps = 10/291 (3%)
Query: 177 IDEKPISEINTSPGGDLMA-CGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKN 235
I KP S I +P D +A S SG +N + S +S + +S K
Sbjct: 168 ITTKPTSTIQVAPPRDPVAPTTSSSGITKKPENGEFSLVKTISGHTKSVSVIKFSYCGKY 227
Query: 236 IFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQ 295
+ + D +I ++++ D T ++ L + + FI S S D T + D +
Sbjct: 228 LGTGSADKQIKVWNTVDMTYLQTLASHQLGINDFSWSSNSQFIASASDDTTVKIFDVISG 287
Query: 296 APILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDW 355
A + GH+ VF SF+ SL+++AG D +WD ++G + + HS PI S+ +
Sbjct: 288 ACLRTMRGHTNYVFCCSFNPQSSLIASAGFDETVRVWDFKTGLCVKCIPAHSDPITSISY 347
Query: 356 SQNGYQLASGSGDGTIKVWDIRKKGNVETIL-AHNSIVSQVKFNKQNGGYLVSSGYDKKV 414
+ +G +A+ S DG I+VWD ++T++ ++ V+ V F+ NG YL+S+ D +
Sbjct: 348 NHDGNTMATSSYDGCIRVWDAASGSCLKTLVDTDHAPVTFVCFS-PNGKYLLSAQLDSSL 406
Query: 415 NIFNDGNWIKERSLEGHLDKV------MSIDIVGPDIYSAGWDRSVNKWGV 459
+++ + GH +K MS+ + G I S D + W +
Sbjct: 407 KLWDPKKAKPLKYYNGHKNKKYCLFANMSVPL-GKHIISGSEDGRILVWSI 456
Score = 53.1 bits (126), Expect = 8e-07
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 6/157 (3%)
Query: 224 ISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCH-PCNSFIGSTS 282
I+ + ++ D + ++DG I ++D+ + +K L D C P ++ S
Sbjct: 342 ITSISYNHDGNTMATSSYDGCIRVWDAASGSCLKTLVDTDHAPVTFVCFSPNGKYLLSAQ 401
Query: 283 FDKTWILIDTVKQAPILIQEGHSAEVFSLSFHND---GSLVSTAGLDAIALIWDIRSGKN 339
D + L D K P+ GH + + L + G + + D L+W I++ +
Sbjct: 402 LDSSLKLWDPKKAKPLKYYNGHKNKKYCLFANMSVPLGKHIISGSEDGRILVWSIQTKQI 461
Query: 340 IMSLQGHSKPIYSVDWSQNGYQLASG--SGDGTIKVW 374
+ L+GH+ P+ + D +ASG D I++W
Sbjct: 462 VQILEGHTTPVLATDSHPTLNIIASGGLEPDNVIRIW 498
>SPBC15D4.14 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 642
Score = 97.8 bits (242), Expect = 3e-20
Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 1/195 (0%)
Query: 224 ISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSF 283
+ G+ S + I C+ DG ++ ++T+ ++A V+ P + + S
Sbjct: 406 VFGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASH 465
Query: 284 DKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSL 343
D+T L D AP+ + GH +V +SFH + + ++T D +WD+R+G +
Sbjct: 466 DQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVF 525
Query: 344 QGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGG 403
H P+ ++ S +G LAS G IKVWD+R + + H+SIV + F+ N
Sbjct: 526 NAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDN-K 584
Query: 404 YLVSSGYDKKVNIFN 418
LVS G D VN ++
Sbjct: 585 ILVSGGADTDVNFWD 599
Score = 65.1 bits (157), Expect = 2e-10
Identities = 48/238 (20%), Positives = 93/238 (38%), Gaps = 9/238 (3%)
Query: 180 KPISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVC 239
+P+ ++ SP + + S G L + I + +S
Sbjct: 404 RPVFGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATA 463
Query: 240 THDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPIL 299
+HD ++D +++ + V HP +++ + S D T + D +
Sbjct: 464 SHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVR 523
Query: 300 IQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNG 359
+ H + V +L DG +++A I +WD+RS +S HS +YS+ +S +
Sbjct: 524 VFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDN 583
Query: 360 YQLASGSGDGTIKVWDIRKKGNVE---------TILAHNSIVSQVKFNKQNGGYLVSS 408
L SG D + WD+ + N+ N+I+ + F ++N +SS
Sbjct: 584 KILVSGGADTDVNFWDLTYRNNLSDGEQSPLLFNFKTKNTIIQNLSFTRRNYCLALSS 641
Score = 60.8 bits (146), Expect = 4e-09
Identities = 36/151 (23%), Positives = 62/151 (40%), Gaps = 1/151 (0%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH+ VF +S + + D +W + I+ GH+ PI+ V +S GY
Sbjct: 401 GHTRPVFGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYF 460
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNW 422
A+ S D T ++WD+ + + H + V V F+ N YL + D +++
Sbjct: 461 ATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFH-PNAAYLATGSSDHTTRMWDVRTG 519
Query: 423 IKERSLEGHLDKVMSIDIVGPDIYSAGWDRS 453
R H V ++ + + A D S
Sbjct: 520 GTVRVFNAHHSPVSALCMSADGLSLASADES 550
>CE11748 [R] KOG0266 WD40 repeat-containing protein
Length = 395
Score = 95.1 bits (235), Expect = 2e-19
Identities = 79/267 (29%), Positives = 124/267 (45%), Gaps = 10/267 (3%)
Query: 179 EKPISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTK--ISGLDWSVDSKNI 236
+K IS I SP G M GS S + S+ + +Y ++L G + I+ WS DSK I
Sbjct: 107 KKSISGIKFSPDGRYM--GSGSADCSIKIWRMDFVY-EKTLMGHRLGINEFSWSSDSKLI 163
Query: 237 FVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRC-HPCNSFIGSTSFDKTWILIDTVKQ 295
C+ D + ++D VK L K + C +P + I S SFD+T +
Sbjct: 164 VSCSDDKLVKVFDVSSGRCVKTL-KGHTNYVFCCCFNPSGTLIASGSFDETIRIWCARNG 222
Query: 296 APILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSL-QGHSKPIYSVD 354
I GH V S+ F+ DG+ +++ D I IWD +G + +L PI V
Sbjct: 223 NTIFSIPGHEDPVSSVCFNRDGAYLASGSYDGIVRIWDSTTGTCVKTLIDEEHPPITHVK 282
Query: 355 WSQNGYQLASGSGDGTIKVWDIRKKGNVETILAH--NSIVSQVKFNKQNGGYLVSSGYDK 412
+S NG + + + + T+K+WD +K ++ H + F+ G ++VS D
Sbjct: 283 FSPNGKYILASNLNNTLKLWDYQKLRVLKEYTGHENSKYCVAANFSVTGGKWIVSGSEDH 342
Query: 413 KVNIFNDGNWIKERSLEGHLDKVMSID 439
KV I+N ++L+GH VM D
Sbjct: 343 KVYIWNLQTREILQTLDGHNTAVMCTD 369
Score = 57.4 bits (137), Expect = 4e-08
Identities = 43/175 (24%), Positives = 68/175 (38%), Gaps = 44/175 (25%)
Query: 300 IQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIW--------------------------- 332
I H + + F DG + + D IW
Sbjct: 102 IPNAHKKSISGIKFSPDGRYMGSGSADCSIKIWRMDFVYEKTLMGHRLGINEFSWSSDSK 161
Query: 333 --------------DIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRK 378
D+ SG+ + +L+GH+ ++ ++ +G +ASGS D TI++W R
Sbjct: 162 LIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIASGSFDETIRIWCARN 221
Query: 379 KGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFND--GNWIKERSLEGH 431
+ +I H VS V FN+ +G YL S YD V I++ G +K E H
Sbjct: 222 GNTIFSIPGHEDPVSSVCFNR-DGAYLASGSYDGIVRIWDSTTGTCVKTLIDEEH 275
>7302603 [R] KOG0289 mRNA splicing factor
Length = 505
Score = 94.7 bits (234), Expect = 2e-19
Identities = 59/208 (28%), Positives = 102/208 (48%), Gaps = 12/208 (5%)
Query: 223 KISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTS 282
KI+ + + + + + D I I+ T +L ++ + HP ++ STS
Sbjct: 267 KITKVIYHPNEDTVITGSPDMNIRIWHVPTSQTQLLLRCHEGPVTGLSLHPTGDYLLSTS 326
Query: 283 FDKTWILIDTVKQAPILIQEGHSAEV--FSLSFHNDGSLVSTAGLDAIALIWDIRSGKNI 340
DK W D ++ +L + +AEV + FH DG + T +D+ IWD++ N+
Sbjct: 327 SDKHWAFSD-IRTGRLLTKVIDTAEVGLTTAQFHPDGLIFGTGTVDSQVKIWDLKEQSNV 385
Query: 341 MSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQ 400
+ GH+ PI ++ +S+NGY LA+ + D +K+WD+RK N +TI + + Q
Sbjct: 386 ANFPGHTGPISAISFSENGYYLATAADDACVKLWDLRKLKNFKTIQLDDGYEVKDLCFDQ 445
Query: 401 NGGYLVSSGYDKKV---------NIFND 419
+G YL +G D +V +FND
Sbjct: 446 SGTYLAIAGSDVRVYLCKQWQELKVFND 473
>Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 446
Score = 93.6 bits (231), Expect = 6e-19
Identities = 66/250 (26%), Positives = 112/250 (44%), Gaps = 1/250 (0%)
Query: 188 SPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVI 247
+P GD +A GS+ L K Y +I L ++ S + + D +
Sbjct: 61 NPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKL 120
Query: 248 YDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAE 307
+D + V L + A + + I + SFD T ++ D + I GH AE
Sbjct: 121 WDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAE 180
Query: 308 VFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSG 367
+ S SF+ D SL+ T +D +WD +GK + +L GH I + G +A+ S
Sbjct: 181 ISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASA 240
Query: 368 DGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERS 427
DGT +++ + + + H +S++ FN Q G +L++ DK I++ +
Sbjct: 241 DGTARIFSAATRKCIAKLEGHEGEISKISFNPQ-GNHLLTGSSDKTARIWDAQTGQCLQV 299
Query: 428 LEGHLDKVMS 437
LEGH D++ S
Sbjct: 300 LEGHTDEIFS 309
Score = 79.0 bits (193), Expect = 1e-14
Identities = 50/180 (27%), Positives = 90/180 (49%), Gaps = 11/180 (6%)
Query: 276 SFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHND-GSLVSTAGLDAIALIWDI 334
SFI + S+D+T L DT + EGH V++++F+N G ++T D +W +
Sbjct: 23 SFI-TGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSV 81
Query: 335 RSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQ 394
+GK + +GH+ I + ++ +A+GS D T K+WDI+ V T+ H++ +
Sbjct: 82 ETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIIS 141
Query: 395 VKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRSV 454
+ FN +G +++ +D V +++ K L GH ++ S S WD S+
Sbjct: 142 LSFN-TSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSA--------SFNWDCSL 192
Score = 78.6 bits (192), Expect = 2e-14
Identities = 57/215 (26%), Positives = 93/215 (42%), Gaps = 2/215 (0%)
Query: 185 INTSPGGDLMACGSWSGNLSLVD-NSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDG 243
++ +P L+A GS L D + ++Y R S IS L ++ I + D
Sbjct: 100 LSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIIS-LSFNTSGDRIITGSFDH 158
Query: 244 RIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEG 303
+V++D+ V IL + A + + S I + S DKT L D + G
Sbjct: 159 TVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTG 218
Query: 304 HSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLA 363
H E+ F G L++TA D A I+ + K I L+GH I + ++ G L
Sbjct: 219 HDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLL 278
Query: 364 SGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFN 398
+GS D T ++WD + ++ + H + FN
Sbjct: 279 TGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFN 313
Score = 58.2 bits (139), Expect = 3e-08
Identities = 37/140 (26%), Positives = 71/140 (50%), Gaps = 6/140 (4%)
Query: 322 TAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQ-NGYQLASGSGDGTIKVWDIRKKG 380
T D +WD SG+ + +L+GH +Y++ ++ G ++A+GS D T K+W +
Sbjct: 26 TGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGK 85
Query: 381 NVETILAHNSIVSQVKFNKQNGGYLVSSG-YDKKVNIFNDGNWIKERSLEGHLDKVMSI- 438
T H + + + FN Q+ LV++G D +++ N + +L GH +++S+
Sbjct: 86 CYHTFRGHTAEIVCLSFNPQS--TLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLS 143
Query: 439 -DIVGPDIYSAGWDRSVNKW 457
+ G I + +D +V W
Sbjct: 144 FNTSGDRIITGSFDHTVVVW 163
Score = 54.3 bits (129), Expect = 4e-07
Identities = 45/212 (21%), Positives = 89/212 (41%), Gaps = 4/212 (1%)
Query: 148 VSQNVKNVISKRRDLESKLKQFSLKGMQVIDEKPISEINTSPGGDLMACGSWSGNLSLVD 207
V+ + +K D+++ + ++L+G I ++ + GD + GS+ + + D
Sbjct: 109 VATGSMDTTAKLWDIQNGEEVYTLRGHSA----EIISLSFNTSGDRIITGSFDHTVVVWD 164
Query: 208 NSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFA 267
+ +IS ++ D I + D ++D+ + V L +D
Sbjct: 165 ADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEIL 224
Query: 268 QVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDA 327
I + S D T + + I EGH E+ +SF+ G+ + T D
Sbjct: 225 DSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDK 284
Query: 328 IALIWDIRSGKNIMSLQGHSKPIYSVDWSQNG 359
A IWD ++G+ + L+GH+ I+S ++ G
Sbjct: 285 TARIWDAQTGQCLQVLEGHTDEIFSCAFNYKG 316
>Hs5031817 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 655
Score = 92.8 bits (229), Expect = 9e-19
Identities = 69/241 (28%), Positives = 108/241 (44%), Gaps = 9/241 (3%)
Query: 191 GDLMACGSWSGNLSLVDNSLSKIYCNRSLSG--TKISGLDWSVDSKNIFVCTHDGRIVIY 248
G L+A G ++L S++K C SL+G + + + + + I + G I ++
Sbjct: 33 GRLLATGGDDCRVNLW--SINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 90
Query: 249 DSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEV 308
D ++ L A + HP F+ S S D L D ++ + GHS V
Sbjct: 91 DLEAAKILRTLMGLKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAV 150
Query: 309 FSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGD 368
L F DG +++A D +WD+ +GK + GH+ P+ V++ N Y LASGS D
Sbjct: 151 RCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Query: 369 GTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSL 428
GTI+ WD+ K V I V V FN G + SG + ++ W ER
Sbjct: 211 GTIRFWDLEKFQVVSRIEGEPGPVRSVLFNPD--GCCLYSGCQDSLRVY---GWEPERCF 265
Query: 429 E 429
+
Sbjct: 266 D 266
>Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 92.4 bits (228), Expect = 1e-18
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 6/211 (2%)
Query: 253 ETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAP-ILIQEGHSAEVFSL 311
+ + +L ++ + HP S + S FD+ +L + +GHS V L
Sbjct: 56 QAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMEL 115
Query: 312 SFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL-ASGSGDGT 370
++ DGS++ +A D +WD +G+ + L+GH+ + S ++ G QL +GS DGT
Sbjct: 116 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 175
Query: 371 IKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEG 430
+K+WDIRKK ++T +++ V FN ++S G D + +++ ++ G
Sbjct: 176 VKLWDIRKKAAIQTFQNTYQVLA-VTFN-DTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 233
Query: 431 HLDKV--MSIDIVGPDIYSAGWDRSVNKWGV 459
H D V +S+ G + S D +V W V
Sbjct: 234 HADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Score = 63.5 bits (153), Expect = 6e-10
Identities = 41/154 (26%), Positives = 76/154 (48%), Gaps = 6/154 (3%)
Query: 227 LDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCN---SFIGSTSF 283
L ++ D +F + D + ++DS VK L K F C+P + + S
Sbjct: 115 LHYNTDGSMLFSASTDKTVAVWDSETGERVKRL-KGHTSFVN-SCYPARRGPQLVCTGSD 172
Query: 284 DKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSL 343
D T L D K+A I + ++ +V +++F++ + + G+D +WD+R K ++
Sbjct: 173 DGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 231
Query: 344 QGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIR 377
+GH+ + + S G L S + D T++VWD+R
Sbjct: 232 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 265
Score = 56.2 bits (134), Expect = 1e-07
Identities = 42/187 (22%), Positives = 84/187 (44%), Gaps = 12/187 (6%)
Query: 238 VCT--HDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQ 295
VCT DG + ++D + ++ ++N + V + + I S D + D +
Sbjct: 167 VCTGSDDGTVKLWDIRKKAAIQT-FQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 225
Query: 296 APILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIR----SGKNIMSLQGH----S 347
GH+ V LS ++GS + + +D +WD+R + + QG+
Sbjct: 226 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 285
Query: 348 KPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVS 407
K + WS +G ++A+GS D + VWD + + + H +++V F+ ++S
Sbjct: 286 KNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDE-PIIIS 344
Query: 408 SGYDKKV 414
+ DK++
Sbjct: 345 ASSDKRL 351
>YCR084c [R] KOG0266 WD40 repeat-containing protein
Length = 713
Score = 91.7 bits (226), Expect = 2e-18
Identities = 54/159 (33%), Positives = 85/159 (52%), Gaps = 10/159 (6%)
Query: 310 SLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDG 369
S+ F DG ++T D + IWDI + K +M LQGH + IYS+D+ +G +L SGSGD
Sbjct: 448 SVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDR 507
Query: 370 TIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIF-NDGNWIKER-- 426
T+++WD+R G L+ V+ V + +G Y+ + D+ V ++ ++ ++ ER
Sbjct: 508 TVRIWDLR-TGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLD 566
Query: 427 ----SLEGHLDKVMSIDIV--GPDIYSAGWDRSVNKWGV 459
S GH D V S+ G + S DRSV W +
Sbjct: 567 SENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNL 605
Score = 58.5 bits (140), Expect = 2e-08
Identities = 52/217 (23%), Positives = 89/217 (40%), Gaps = 22/217 (10%)
Query: 262 NDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVS 321
+D V P F+ + + D+ + D + ++I +GH +++SL + G +
Sbjct: 442 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLV 501
Query: 322 TAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDI----- 376
+ D IWD+R+G+ ++L +G +A+GS D ++VWD
Sbjct: 502 SGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL 561
Query: 377 --RKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN------------DGNW 422
R E+ H V V F + +G +VS D+ V ++N +
Sbjct: 562 VERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG 620
Query: 423 IKERSLEGHLDKVMSIDIVGPDIY--SAGWDRSVNKW 457
E + GH D V+S+ D Y S DR V W
Sbjct: 621 TCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFW 657
>Hs16554627 [R] KOG0266 WD40 repeat-containing protein
Length = 334
Score = 91.3 bits (225), Expect = 3e-18
Identities = 73/274 (26%), Positives = 126/274 (45%), Gaps = 7/274 (2%)
Query: 169 FSLKGMQVIDEKPISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTK--ISG 226
++LK K +S + SP G+ +A S + + K +++SG K IS
Sbjct: 35 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISD 92
Query: 227 LDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKT 286
+ WS DS + + D + I+D +K L + +P ++ I S SFD++
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 287 WILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSL-QG 345
+ D + HS V ++ F+ DGSL+ ++ D + IWD SG+ + +L
Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212
Query: 346 HSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNS--IVSQVKFNKQNGG 403
+ P+ V +S NG + + + D T+K+WD K ++T H + F+ G
Sbjct: 213 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK 272
Query: 404 YLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMS 437
++VS D V I+N + L+GH D V+S
Sbjct: 273 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIS 306
Score = 73.9 bits (180), Expect = 5e-13
Identities = 45/157 (28%), Positives = 76/157 (47%), Gaps = 3/157 (1%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH+ V S+ F +G ++++ D + IW GK ++ GH I V WS + L
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNW 422
S S D T+K+WD+ ++T+ H++ V FN Q+ +VS +D+ V I++
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTG 161
Query: 423 IKERSLEGHLDKVMSIDI--VGPDIYSAGWDRSVNKW 457
++L H D V ++ G I S+ +D W
Sbjct: 162 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 198
Score = 55.1 bits (131), Expect = 2e-07
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Query: 342 SLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQN 401
+L GH+K + SV +S NG LAS S D IK+W +TI H +S V ++ +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-SD 98
Query: 402 GGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPD---IYSAGWDRSVNKWG 458
LVS+ DK + I++ + ++L+GH + V + P I S +D SV W
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF-NPQSNLIVSGSFDESVRIWD 157
Query: 459 V 459
V
Sbjct: 158 V 158
>Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 90.1 bits (222), Expect = 6e-18
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 6/211 (2%)
Query: 253 ETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAP-ILIQEGHSAEVFSL 311
+ + +L ++ + HP S + S FD+ +L + +GHS V L
Sbjct: 56 QAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMEL 115
Query: 312 SFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLA-SGSGDGT 370
++ DGS++ +A D +WD +G+ + L+GH+ + S ++ QL +GS DGT
Sbjct: 116 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARKSPQLVCTGSDDGT 175
Query: 371 IKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEG 430
+K+WDIRKK ++T +++ V FN ++S G D + +++ ++ G
Sbjct: 176 VKLWDIRKKAAIQTFQNTYQVLA-VTFN-DTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 233
Query: 431 HLDKV--MSIDIVGPDIYSAGWDRSVNKWGV 459
H D V +S+ G + S D +V W V
Sbjct: 234 HADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Score = 63.5 bits (153), Expect = 6e-10
Identities = 41/154 (26%), Positives = 76/154 (48%), Gaps = 6/154 (3%)
Query: 227 LDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNS---FIGSTSF 283
L ++ D +F + D + ++DS VK L K F C+P + + S
Sbjct: 115 LHYNTDGSMLFSASTDKTVAVWDSETGERVKRL-KGHTSFVN-SCYPARKSPQLVCTGSD 172
Query: 284 DKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSL 343
D T L D K+A I + ++ +V +++F++ + + G+D +WD+R K ++
Sbjct: 173 DGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 231
Query: 344 QGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIR 377
+GH+ + + S G L S + D T++VWD+R
Sbjct: 232 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 265
Score = 56.2 bits (134), Expect = 1e-07
Identities = 42/187 (22%), Positives = 84/187 (44%), Gaps = 12/187 (6%)
Query: 238 VCT--HDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQ 295
VCT DG + ++D + ++ ++N + V + + I S D + D +
Sbjct: 167 VCTGSDDGTVKLWDIRKKAAIQT-FQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 225
Query: 296 APILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIR----SGKNIMSLQGH----S 347
GH+ V LS ++GS + + +D +WD+R + + QG+
Sbjct: 226 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 285
Query: 348 KPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVS 407
K + WS +G ++A+GS D + VWD + + + H +++V F+ ++S
Sbjct: 286 KNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDE-PIIIS 344
Query: 408 SGYDKKV 414
+ DK++
Sbjct: 345 ASSDKRL 351
>7290331 [R] KOG0266 WD40 repeat-containing protein
Length = 361
Score = 89.0 bits (219), Expect = 1e-17
Identities = 70/273 (25%), Positives = 128/273 (46%), Gaps = 7/273 (2%)
Query: 169 FSLKGMQVIDEKPISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTK--ISG 226
++LK K +S + SP G+ +A S + + K +++SG K IS
Sbjct: 62 YTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISD 119
Query: 227 LDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKT 286
+ WS DS+ + + D + +++ ++K L + +P ++ I S SFD++
Sbjct: 120 VAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 179
Query: 287 WILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSL-QG 345
+ D + HS V ++ F+ DGSL+ ++ D + IWD SG+ + +L
Sbjct: 180 VRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 239
Query: 346 HSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNS--IVSQVKFNKQNGG 403
+ P+ V +S NG + + + D T+K+WD K ++T H + F+ G
Sbjct: 240 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK 299
Query: 404 YLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVM 436
++VS D V I+N + + L+GH D V+
Sbjct: 300 WIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVL 332
Score = 75.5 bits (184), Expect = 2e-13
Identities = 59/239 (24%), Positives = 113/239 (46%), Gaps = 8/239 (3%)
Query: 200 SGNLSLVDNSLSKIYCNRSLSGT------KISGLDWSVDSKNIFVCTHDGRIVIYDSGDE 253
S N S + S + N +L T +S + +S + + + + D I I+ + D
Sbjct: 45 SSNSSASNKSSLSVKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDG 104
Query: 254 TTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSF 313
K + + + V + + S S DKT + + + +GHS VF +F
Sbjct: 105 KFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNF 164
Query: 314 HNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKV 373
+ +L+ + D IWD+R+GK + +L HS P+ +V ++++G + S S DG ++
Sbjct: 165 NPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 224
Query: 374 WDIRKKGNVETIL-AHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGH 431
WD ++T++ N VS VKF+ NG Y++++ D + +++ ++ GH
Sbjct: 225 WDTASGQCLKTLIDDDNPPVSFVKFS-PNGKYILAATLDNTLKLWDYSKGKCLKTYTGH 282
Score = 74.7 bits (182), Expect = 3e-13
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 3/157 (1%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH+ V ++ F +G ++++ D + IW GK ++ GH I V WS + L
Sbjct: 70 GHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 129
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNW 422
SGS D T+KVW++ +++T+ H++ V FN Q+ +VS +D+ V I++
Sbjct: 130 VSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTG 188
Query: 423 IKERSLEGHLDKVMSIDI--VGPDIYSAGWDRSVNKW 457
++L H D V ++ G I S+ +D W
Sbjct: 189 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 225
>At1g04510 [R] KOG0289 mRNA splicing factor
Length = 535
Score = 88.6 bits (218), Expect = 2e-17
Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 10/260 (3%)
Query: 161 DLESKLKQFSLKGMQVIDEKPISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLS 220
D K Q S + ++ I ++ D++A G L D +I +
Sbjct: 216 DALEKFTQLSSHPLHKTNKPGIFSMDILHSKDVIATGGIDTTAVLFDRPSGQILSTLTGH 275
Query: 221 GTKISGLDWSVDSKNIFVCTHDGRIVIY---DSGDETTVKILYKNDARFAQVRCHPCNSF 277
K++ + + D+ + + D + I+ + G+ T+ L + A V H N +
Sbjct: 276 SKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHATNKY 335
Query: 278 IGSTSFDKTWILIDTVKQ---APILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDI 334
S S D TW D A + + + +FH DG ++ T +I IWD+
Sbjct: 336 FVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHPDGLILGTGTAQSIVKIWDV 395
Query: 335 RSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQ 394
+S N+ GH+ I S+ +S+NGY LA+ + DG +++WD+RK N T ++ +
Sbjct: 396 KSQANVAKFGGHNGEITSISFSENGYFLATAALDG-VRLWDLRKLKNFRTFDFPDA--NS 452
Query: 395 VKFNKQNGGYLVSSGYDKKV 414
V+F+ +G YL + D +V
Sbjct: 453 VEFD-HSGSYLGIAASDIRV 471
>7302720 [R] KOG0266 WD40 repeat-containing protein
Length = 307
Score = 87.4 bits (215), Expect = 4e-17
Identities = 64/233 (27%), Positives = 116/233 (49%), Gaps = 6/233 (2%)
Query: 206 VDNSLSKIYC-NRSLSGTK--ISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKN 262
++NS+S Y SL G ++GL +S + +N+ + D + ++D ++ L +
Sbjct: 38 LENSMSPGYAIKHSLLGHSGCVTGLKFSSNGENLVSSSGDRLLKLWDLSATRCIQSLAGH 97
Query: 263 DARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVST 322
V I S S D T L D + + + EGHS FS F+ +L+++
Sbjct: 98 GDGVNDVAWSAAG-LIASCSDDMTVRLWDARSKLCVKVLEGHSRYSFSCCFNPQANLLAS 156
Query: 323 AGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNV 382
D +WD+R+GK + + H PI SVD+ ++G + S DG +++WD +
Sbjct: 157 TSFDETVRLWDVRTGKTLKIVHAHQDPITSVDFHRDGNIFVTSSYDGLVRLWDSSTGHVL 216
Query: 383 ETILAHNSI-VSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDK 434
+T++ ++I V VKF+ NG Y++SS + + ++N R+ GHL++
Sbjct: 217 KTLVDVDNIPVGYVKFS-PNGRYILSSTLNNTLRLWNYKKPKCMRTYRGHLNE 268
>Hs19913371 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 514
Score = 85.9 bits (211), Expect = 1e-16
Identities = 67/257 (26%), Positives = 113/257 (43%), Gaps = 16/257 (6%)
Query: 173 GMQVIDEKPISEINTSPGGDLMACGSWSG--NLSLVDNSLSKIYCNRSLSGTKISGLDWS 230
G V K ++ ++ + G L+A GS+ G + D +L+ I L W+
Sbjct: 219 GQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLGQHK---GPIFALKWN 275
Query: 231 VDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILI 290
I D +I+D+ + + A V N+F S S D +
Sbjct: 276 KKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVC 334
Query: 291 DTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPI 350
+ PI +GH+ EV ++ + G+L+++ D IW ++ + LQ H+K I
Sbjct: 335 KLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEI 394
Query: 351 YSVDWSQNG---------YQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQN 401
Y++ WS G LAS S D T+++WD+ + + T+ H V V F+ +
Sbjct: 395 YTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFS-PD 453
Query: 402 GGYLVSSGYDKKVNIFN 418
G YL S +DK V+I+N
Sbjct: 454 GRYLASGSFDKCVHIWN 470
Score = 65.9 bits (159), Expect = 1e-10
Identities = 46/206 (22%), Positives = 84/206 (40%), Gaps = 53/206 (25%)
Query: 304 HSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSG-------------------------- 337
H +F+L ++ G+ + +AG+D +IWD +G
Sbjct: 265 HKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFAS 324
Query: 338 ---------------KNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNV 382
+ I + QGH+ + ++ W G LAS S D T+K+W +++ V
Sbjct: 325 CSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCV 384
Query: 383 ETILAHNSIVSQVKFNKQNGG--------YLVSSGYDKKVNIFNDGNWIKERSLEGHLDK 434
+ AHN + +K++ G L S+ +D V +++ I +L H +
Sbjct: 385 HDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEP 444
Query: 435 VMSIDIVGPD---IYSAGWDRSVNKW 457
V S+ PD + S +D+ V+ W
Sbjct: 445 VYSV-AFSPDGRYLASGSFDKCVHIW 469
Score = 60.5 bits (145), Expect = 5e-09
Identities = 40/156 (25%), Positives = 75/156 (47%), Gaps = 18/156 (11%)
Query: 299 LIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQ-------------- 344
++ GH +EVF +++ L+++ D+ A IW++ S Q
Sbjct: 163 VVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDV 222
Query: 345 GHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILA-HNSIVSQVKFNKQNGG 403
+K + S+DW+ G LA+GS DG ++W K GN+ + L H + +K+NK+ G
Sbjct: 223 PSNKDVTSLDWNSEGTLLATGSYDGFARIW--TKDGNLASTLGQHKGPIFALKWNKK-GN 279
Query: 404 YLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSID 439
+++S+G DK I++ ++ H + +D
Sbjct: 280 FILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVD 315
Score = 58.9 bits (141), Expect = 2e-08
Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 10/165 (6%)
Query: 223 KISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHP--------- 273
+++ + W + C+ D + I+ + V L ++ ++ P
Sbjct: 351 EVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPN 410
Query: 274 CNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWD 333
N + S SFD T L D + I H V+S++F DG +++ D IW+
Sbjct: 411 ANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWN 470
Query: 334 IRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRK 378
++G + S +G + I+ V W+ G ++ + + DG++ V D+RK
Sbjct: 471 TQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVCVLDLRK 514
Score = 53.9 bits (128), Expect = 5e-07
Identities = 37/155 (23%), Positives = 72/155 (45%), Gaps = 5/155 (3%)
Query: 307 EVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGS 366
+V SL ++++G+L++T D A IW + G +L H PI+++ W++ G + S
Sbjct: 227 DVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAG 285
Query: 367 GDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKER 426
D T +WD + H++ V + Q+ S D +++ G +
Sbjct: 286 VDKTTIIWDAHTGEAKQQFPFHSAPALDVDW--QSNNTFASCSTDMCIHVCKLGQDRPIK 343
Query: 427 SLEGHLDKVMSI--DIVGPDIYSAGWDRSVNKWGV 459
+ +GH ++V +I D G + S D ++ W +
Sbjct: 344 TFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM 378
>7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 347
Score = 85.1 bits (209), Expect = 2e-16
Identities = 61/192 (31%), Positives = 86/192 (44%), Gaps = 6/192 (3%)
Query: 272 HPCNSFIGSTSFDKTWILIDTVKQAP-ILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIAL 330
HP + S+ FD+ + + ++ GHS V F DGS + T D
Sbjct: 64 HPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLA 123
Query: 331 IWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ-LASGSGDGTIKVWDIRKKGNVETILAHN 389
WDI +G+ +GH + SV S+ G Q L SGS D TIK+WD RKK T L
Sbjct: 124 FWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHT-LESP 182
Query: 390 SIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKV--MSIDIVGPDIYS 447
V+ V F G ++S G D +V I++ L GH D + MS+ G I +
Sbjct: 183 FQVTAVCFG-DTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILT 241
Query: 448 AGWDRSVNKWGV 459
D ++ W V
Sbjct: 242 NAMDNTLRVWDV 253
Score = 78.2 bits (191), Expect = 2e-14
Identities = 44/167 (26%), Positives = 77/167 (45%), Gaps = 2/167 (1%)
Query: 295 QAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDI-RSGKNIMSLQGHSKPIYSV 353
QAPI+ EGH E+F+ FH +G L+ ++G D IW + +N+M++ GHS +
Sbjct: 45 QAPIMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEA 104
Query: 354 DWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKK 413
++ +G + + S D T+ WDI H + V+ V+ +++ L S D+
Sbjct: 105 HFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRT 164
Query: 414 VNIFNDGNWIKERSLEGHLD-KVMSIDIVGPDIYSAGWDRSVNKWGV 459
+ I++ +LE + G + S G D V W +
Sbjct: 165 IKIWDARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDI 211
Score = 55.1 bits (131), Expect = 2e-07
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 13/137 (9%)
Query: 285 KTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIR----SGKNI 340
K W D KQA + GHS + +S +G + T +D +WD+R + +
Sbjct: 207 KIW---DIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCV 263
Query: 341 MSLQGHS----KPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVK 396
QGH K + WS ++ SGS D + +WD+ + + + HN V+ V
Sbjct: 264 KVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVD 323
Query: 397 FNKQNGGYLVSSGYDKK 413
F+ + L+ SG K
Sbjct: 324 FSPKEP--LILSGSSDK 338
Score = 51.2 bits (121), Expect = 3e-06
Identities = 53/217 (24%), Positives = 89/217 (40%), Gaps = 11/217 (5%)
Query: 232 DSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQV--RCHPCNSFIGSTSFDKTWIL 289
D +IF C+ D + +D + +K F + S S D+T +
Sbjct: 109 DGSHIFTCSTDKTLAFWDIATGQRQR-RFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKI 167
Query: 290 IDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKP 349
D K+ E +V ++ F + G V + G+D IWDIR + L+GHS
Sbjct: 168 WDARKKHAAHTLES-PFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDT 226
Query: 350 IYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETIL------AHNSIVSQVKFNKQNGG 403
I + S G + + + D T++VWD+R E + HN + ++ G
Sbjct: 227 ITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGS 286
Query: 404 YLVSSG-YDKKVNIFNDGNWIKERSLEGHLDKVMSID 439
++SG D+ V I++ L GH V ++D
Sbjct: 287 DKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVD 323
>CE00901 [R] KOG0266 WD40 repeat-containing protein
Length = 376
Score = 84.7 bits (208), Expect = 3e-16
Identities = 67/251 (26%), Positives = 116/251 (45%), Gaps = 50/251 (19%)
Query: 180 KPISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTK--ISGLDWSVDSKNIF 237
K IS SP G + G+ S + ++ ++ + C R+L+G K ++ + WS DS
Sbjct: 88 KSISSAKFSPCGKYL--GTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS---- 141
Query: 238 VCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAP 297
RC + S S DKT + + V
Sbjct: 142 --------------------------------RC------VVSASDDKTLKIFEIVTSRM 163
Query: 298 ILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQ 357
+GH+ VF +F+ SLV + D IWD+++G I +L HS P+ +V +++
Sbjct: 164 TKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNR 223
Query: 358 NGYQLASGSGDGTIKVWDIRKKGNVETIL-AHNSIVSQVKFNKQNGGYLVSSGYDKKVNI 416
+G +ASGS DG +++WD ++T++ N V+ VKF+ NG Y+++S D + +
Sbjct: 224 DGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFS-PNGKYILASNLDSTLKL 282
Query: 417 --FNDGNWIKE 425
F+ G +K+
Sbjct: 283 WDFSKGKTLKQ 293
Score = 51.6 bits (122), Expect = 2e-06
Identities = 42/195 (21%), Positives = 85/195 (43%), Gaps = 6/195 (3%)
Query: 186 NTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRI 245
N +P L+ GS+ ++ + D +S + ++ D I ++DG +
Sbjct: 178 NFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLV 237
Query: 246 VIYDSGDETTVKILYKND-ARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGH 304
I+D+ + +K L ++ A V+ P +I +++ D T L D K + GH
Sbjct: 238 RIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGH 297
Query: 305 SAE---VFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
+F+ G + + D IW++++ + + L+GH++P+ + D
Sbjct: 298 ENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNI 357
Query: 362 LASGS--GDGTIKVW 374
+ASG+ D I +W
Sbjct: 358 IASGALEPDNKIHIW 372
>Hs9506645 [R] KOG0266 WD40 repeat-containing protein
Length = 330
Score = 84.3 bits (207), Expect = 3e-16
Identities = 54/196 (27%), Positives = 103/196 (52%), Gaps = 2/196 (1%)
Query: 224 ISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSF 283
+S + +S + + + + D I+I+ + D K LY ++ + V +S + S S
Sbjct: 44 VSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRLVSASD 103
Query: 284 DKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSL 343
DKT L D + +GHS VF +F+ +L+ + D IW++++GK + +L
Sbjct: 104 DKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTL 163
Query: 344 QGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETIL-AHNSIVSQVKFNKQNG 402
HS P+ +V ++ +G + SGS DG ++WD ++T++ N VS VKF+ NG
Sbjct: 164 SAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFS-PNG 222
Query: 403 GYLVSSGYDKKVNIFN 418
Y++++ D + +++
Sbjct: 223 KYILTATLDNTLKLWD 238
Score = 77.0 bits (188), Expect = 5e-14
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 3/157 (1%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH+ V S+ F +G ++++ D + +IW GK +L GH+ I V WS + +L
Sbjct: 39 GHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRL 98
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNW 422
S S D T+K+WD+R ++T+ H++ V FN + ++S +D+ V I+
Sbjct: 99 VSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPS-NLIISGSFDETVKIWEVKTG 157
Query: 423 IKERSLEGHLDKVMSI--DIVGPDIYSAGWDRSVNKW 457
++L H D V ++ + G I S +D W
Sbjct: 158 KCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIW 194
Score = 52.4 bits (124), Expect = 1e-06
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
Query: 342 SLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQN 401
+L GH++ + SV +S NG LAS S D I +W +T+ HN +S V ++ +
Sbjct: 36 TLVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWS-SD 94
Query: 402 GGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPD--IYSAGWDRSVNKWGV 459
LVS+ DK + +++ + ++L+GH + V + P I S +D +V W V
Sbjct: 95 SSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEV 154
>SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 643
Score = 84.0 bits (206), Expect = 4e-16
Identities = 59/245 (24%), Positives = 108/245 (44%), Gaps = 16/245 (6%)
Query: 188 SPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLS-------------GTKISGLDWSVDSK 234
SP ++ACG + L K +S S + G +S D+K
Sbjct: 333 SPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTTFSPDNK 392
Query: 235 NIFVCTHDGRIVIYDSGDETTVKILYK-NDARFAQVRCHPCNSFIGSTSFDKTWILIDTV 293
+ C+ D ++ S D T + YK + V P + + S D+T L
Sbjct: 393 YLLSCSEDASARLW-SVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCD 451
Query: 294 KQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSV 353
P+ + GH ++V ++FH + + V T D +WD+ G ++ GH++P+ +V
Sbjct: 452 HIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAV 511
Query: 354 DWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKK 413
+ +G+ +AS +G I +WDI ++T+ H + + F++++ LVS G D
Sbjct: 512 AIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRES-TVLVSGGSDCT 570
Query: 414 VNIFN 418
V ++
Sbjct: 571 VRAWD 575
Score = 73.9 bits (180), Expect = 5e-13
Identities = 43/154 (27%), Positives = 78/154 (49%), Gaps = 13/154 (8%)
Query: 269 VRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAI 328
V HP ++++ + S DKT L D + + + GH+ V +++ DG +++A + +
Sbjct: 469 VTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGL 528
Query: 329 ALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAH 388
+WDI +G+ I +++GH IYS+ +S+ L SG D T++ WD+ K +
Sbjct: 529 IHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDVFKTN-------Y 581
Query: 389 NSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNW 422
N+ VS V + + K + FN+ NW
Sbjct: 582 NNPVSSSLTGS------VVTPFSAKTSTFNEVNW 609
>7303687 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 704
Score = 84.0 bits (206), Expect = 4e-16
Identities = 52/178 (29%), Positives = 89/178 (49%), Gaps = 2/178 (1%)
Query: 269 VRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAI 328
VR P + S S+DKT L T + + GH ++V + FH + + V+T D
Sbjct: 498 VRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRT 557
Query: 329 ALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAH 388
+WD +G+++ + GH + S+ +S G LASGS D I +WD+ V T+L H
Sbjct: 558 VRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRH 617
Query: 389 NSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIY 446
S V+ + F++ +G L ++G D + ++ D + + E + H+ D D+Y
Sbjct: 618 TSTVTTITFSR-DGTVLAAAGLDNNLTLW-DFHKVTEDYISNHITVSHHQDENDEDVY 673
Score = 67.0 bits (162), Expect = 6e-11
Identities = 37/168 (22%), Positives = 83/168 (49%), Gaps = 2/168 (1%)
Query: 239 CTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPI 298
C++D ++ + +++ + + V+ HP ++++ + S D+T L D + +
Sbjct: 510 CSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSV 569
Query: 299 LIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQN 358
+ GH V SL+F G +++ +D +IWD+ +G + +L H+ + ++ +S++
Sbjct: 570 RLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRD 629
Query: 359 GYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLV 406
G LA+ D + +WD K E ++++ VS + YL+
Sbjct: 630 GTVLAAAGLDNNLTLWDFHKV--TEDYISNHITVSHHQDENDEDVYLM 675
Score = 61.6 bits (148), Expect = 2e-09
Identities = 46/180 (25%), Positives = 76/180 (41%), Gaps = 3/180 (1%)
Query: 280 STSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKN 339
S S D T L + + ++ GH V+ + F G + D A +W S +
Sbjct: 467 SCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQA 526
Query: 340 IMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNK 399
+ GH + V + N +A+GS D T+++WD +V + H VS + F+
Sbjct: 527 LRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFS- 585
Query: 400 QNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIV--GPDIYSAGWDRSVNKW 457
G YL S D + I++ N +L H V +I G + +AG D ++ W
Sbjct: 586 ACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLW 645
Score = 60.8 bits (146), Expect = 4e-09
Identities = 36/157 (22%), Positives = 74/157 (46%), Gaps = 3/157 (1%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH+ V+ +F + +L+ + D+ +W + + +++ +GH P++ V ++ +GY
Sbjct: 448 GHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYF 507
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNW 422
S S D T ++W + + H S V V+F+ N Y+ + D+ V ++++
Sbjct: 508 VSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFH-PNSNYVATGSSDRTVRLWDNMTG 566
Query: 423 IKERSLEGHLDKVMSI--DIVGPDIYSAGWDRSVNKW 457
R + GH V S+ G + S D ++ W
Sbjct: 567 QSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIW 603
Score = 53.1 bits (126), Expect = 8e-07
Identities = 41/127 (32%), Positives = 56/127 (43%), Gaps = 3/127 (2%)
Query: 333 DIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIV 392
D RSG+ SL GH+ P+Y ++ L S S D TI++W + V T H V
Sbjct: 436 DDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPV 495
Query: 393 SQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIYSA--GW 450
V+F +G Y VS YDK ++ + R GHL V + Y A
Sbjct: 496 WDVRF-APHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSS 554
Query: 451 DRSVNKW 457
DR+V W
Sbjct: 555 DRTVRLW 561
>At3g49660 [R] KOG0266 WD40 repeat-containing protein
Length = 317
Score = 83.2 bits (204), Expect = 8e-16
Identities = 62/239 (25%), Positives = 116/239 (47%), Gaps = 5/239 (2%)
Query: 224 ISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSF 283
IS + +S D++ I + D + ++D + +K L + V +P ++ I S SF
Sbjct: 74 ISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSF 133
Query: 284 DKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSL 343
D+T + D + + HS V ++ F+ DGSL+ ++ D + IWD +G + +L
Sbjct: 134 DETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTL 193
Query: 344 -QGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVK--FNKQ 400
+ P+ V +S NG + G+ D T+++W+I ++T H + + F+
Sbjct: 194 IDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVT 253
Query: 401 NGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPD--IYSAGWDRSVNKW 457
NG +VS D V+++ + + LEGH + VM++ + I S D++V W
Sbjct: 254 NGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 74.7 bits (182), Expect = 3e-13
Identities = 43/148 (29%), Positives = 77/148 (51%), Gaps = 6/148 (4%)
Query: 278 IGSTSFDKT--WILIDTVKQA---PILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIW 332
+ S S DKT I+T+ P+ GH + ++F +D + +A D +W
Sbjct: 39 LASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLW 98
Query: 333 DIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIV 392
D+ +G I +L GH+ + V+++ + SGS D T+++WD+ ++ + AH+ V
Sbjct: 99 DVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPV 158
Query: 393 SQVKFNKQNGGYLVSSGYDKKVNIFNDG 420
+ V FN+ +G +VSS YD I++ G
Sbjct: 159 TAVDFNR-DGSLIVSSSYDGLCRIWDSG 185
Score = 60.8 bits (146), Expect = 4e-09
Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 4/199 (2%)
Query: 185 INTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGR 244
+N +P +++ GS+ + + D + K ++ +D++ D I ++DG
Sbjct: 119 VNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGL 178
Query: 245 IVIYDSGDETTVKILYKND-ARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEG 303
I+DSG VK L ++ + VR P FI + D T L + + G
Sbjct: 179 CRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTG 238
Query: 304 HSAEVFSLSFH---NDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGY 360
H + +S +G + + D +W++ S K + L+GH++ + +V
Sbjct: 239 HVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTEN 298
Query: 361 QLASGSGDGTIKVWDIRKK 379
+ASGS D T+++W +K+
Sbjct: 299 LIASGSLDKTVRIWTQKKE 317
>Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 589
Score = 82.8 bits (203), Expect = 1e-15
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 3/208 (1%)
Query: 232 DSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFA-QVRCHPCNSFIGSTSFDKTWILI 290
DS + C+ D I +D G T +LY+ A + P + + S S D+T L
Sbjct: 353 DSSGLLSCSEDMSIRYWDLGSFTNT-VLYQGHAYPVWDLDISPYSLYFASGSHDRTARLW 411
Query: 291 DTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPI 350
+ P+ I GH A+V + FH + + ++T D +W + G ++ GH P+
Sbjct: 412 SFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPV 471
Query: 351 YSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGY 410
S+ +S NG LAS D +K+WD+ + + H ++ + F+ + G + S+
Sbjct: 472 LSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS-PDSGLIASASM 530
Query: 411 DKKVNIFNDGNWIKERSLEGHLDKVMSI 438
D V +++ N +G +++ +
Sbjct: 531 DNSVRVWDIRNTYCSAPADGSSSELVGV 558
Score = 72.0 bits (175), Expect = 2e-12
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 3/160 (1%)
Query: 300 IQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNG 359
I GH V+S F D S + + D WD+ S N + QGH+ P++ +D S
Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYS 396
Query: 360 YQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFND 419
ASGS D T ++W + + H + V VKF+ N YL + DK V +++
Sbjct: 397 LYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFH-PNSNYLATGSTDKTVRLWSA 455
Query: 420 GNWIKERSLEGHLDKVMSIDIV--GPDIYSAGWDRSVNKW 457
R GH V+S+ G + SAG D+ + W
Sbjct: 456 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 495
>At2g33340 [R] KOG0289 mRNA splicing factor
Length = 540
Score = 82.8 bits (203), Expect = 1e-15
Identities = 58/256 (22%), Positives = 113/256 (43%), Gaps = 28/256 (10%)
Query: 161 DLESKLKQFSLKGMQVIDEKPISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLS 220
D + Q S + ++ I ++ D++A G L D +I +
Sbjct: 204 DTLERFTQLSSHPLHKTNKPGICSMDILHSKDVIATGGVDATAVLFDRPSGQILSTLTGH 263
Query: 221 GTKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGS 280
K++ + + DS + + D + V HP N + S
Sbjct: 264 SKKVTSVKFVGDSDLVLTASAD----------------------KVRAVTVHPTNKYFVS 301
Query: 281 TSFDKTWILIDTVKQAPI--LIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGK 338
S D TW D + + + + + + + +FH DG ++ T ++ IWD++S
Sbjct: 302 ASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQA 361
Query: 339 NIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFN 398
N+ GH+ + ++ +S+NGY LA+ + DG +++WD+RK N ++ L+ ++ + V+F+
Sbjct: 362 NVAKFDGHTGEVTAISFSENGYFLATAAEDG-VRLWDLRKLRNFKSFLSADA--NSVEFD 418
Query: 399 KQNGGYLVSSGYDKKV 414
+G YL + D KV
Sbjct: 419 -PSGSYLGIAASDIKV 433
>SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 502
Score = 82.0 bits (201), Expect = 2e-15
Identities = 55/164 (33%), Positives = 79/164 (47%), Gaps = 6/164 (3%)
Query: 260 YKNDARFAQVRCHPCNSFIG----STSFDKTWILIDTVKQA-PILIQEGHSAEVFSLSFH 314
+ ++ R A+ R C G S S D IL D K PI GH V SF
Sbjct: 339 FSDERRKAKERYEACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFS 398
Query: 315 NDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVW 374
DG ++TA D+ +WD ++GK + +L+GH +Y WS + L S S D T+KVW
Sbjct: 399 PDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVW 458
Query: 375 DIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN 418
D+R K + H V V ++ +G + S G DK V I++
Sbjct: 459 DVRSKKMKFDLPGHEDQVFAVDWS-PDGQRVASGGADKAVRIWS 501
Score = 79.7 bits (195), Expect = 8e-15
Identities = 50/176 (28%), Positives = 91/176 (51%), Gaps = 10/176 (5%)
Query: 282 SFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNI- 340
S D T L D Q PI +GH+ V +++ D S+++T +D WD + G I
Sbjct: 154 SGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIG 213
Query: 341 MSLQGHSKPIYSVDW-------SQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVS 393
+L+ H+KPI ++ W Y LASGS D T+++W+++ + + T+ H + ++
Sbjct: 214 DALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPIT 273
Query: 394 QVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIYSAG 449
V++ QN ++ SS YDK + I++ + L+GH +V + + + +G
Sbjct: 274 CVRWGGQN--WIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLSTEHVLRSG 327
Score = 63.5 bits (153), Expect = 6e-10
Identities = 63/271 (23%), Positives = 119/271 (43%), Gaps = 11/271 (4%)
Query: 190 GGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYD 249
G L+A GS + + + L + S I+ + W + I+ ++D I I+D
Sbjct: 238 GPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQNW-IYSSSYDKTIRIWD 296
Query: 250 SGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVF 309
+ D + IL + AR + + S ++D T K + + E +
Sbjct: 297 AKDGKCLHILKGHAARVNHLSLST-EHVLRSGAYDHT-----DFKPKSFSDERRKAKERY 350
Query: 310 SLSFHNDGSLVSTAGLDAIALIWDI-RSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGD 368
G + +A D ++WD +S K I + GH K + +S +G +A+ S D
Sbjct: 351 EACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFD 410
Query: 369 GTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSL 428
++++WD + + T+ H + V Q ++ + LVSS D + +++ + + L
Sbjct: 411 SSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSR-LLVSSSQDTTLKVWDVRSKKMKFDL 469
Query: 429 EGHLDKVMSIDIV--GPDIYSAGWDRSVNKW 457
GH D+V ++D G + S G D++V W
Sbjct: 470 PGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 59.3 bits (142), Expect = 1e-08
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 9/164 (5%)
Query: 303 GHSAEVFSLSFH-NDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
GH + S F + S + T D A +WD + I +++GH+ + V W+ +
Sbjct: 132 GHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASI 191
Query: 362 LASGSGDGTIKVWDIRKKGNV-ETILAHNSIV-----SQVKFNKQNGGYLVSSG-YDKKV 414
+A+GS D TI+ WD +K + + + H + + +G YL++SG D V
Sbjct: 192 IATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTV 251
Query: 415 NIFNDGNWIKERSLEGHLDKVMSIDIVGPD-IYSAGWDRSVNKW 457
I+N +L GH + + G + IYS+ +D+++ W
Sbjct: 252 RIWNVKLRTLLFTLSGHTAPITCVRWGGQNWIYSSSYDKTIRIW 295
>Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 522
Score = 82.0 bits (201), Expect = 2e-15
Identities = 69/274 (25%), Positives = 117/274 (42%), Gaps = 26/274 (9%)
Query: 173 GMQVIDEKPISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYC-NRSLSGT------KIS 225
G V K ++ ++ + G L+A GS+ G ++I+ N +L+ T I
Sbjct: 229 GHDVPSNKDVTSLDWNSDGTLLAMGSYDG--------FARIWTENGNLASTLGQHKGPIF 280
Query: 226 GLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDK 285
L W+ + D +I+D+ + + A V N S S D
Sbjct: 281 ALKWNKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQN-NMTFASCSTDM 339
Query: 286 TWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQG 345
+ P+ +GH+ EV ++ + G L+++ D IW ++ + LQ
Sbjct: 340 CIHVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQA 399
Query: 346 HSKPIYSVDWSQNG---------YQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVK 396
HSK IY++ WS G LAS S D T+++WD+ + T++ H V V
Sbjct: 400 HSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVA 459
Query: 397 FNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEG 430
F+ +G YL S +DK V+I+N + S +G
Sbjct: 460 FS-PDGKYLASGSFDKYVHIWNTQSGSLVHSYQG 492
Score = 63.9 bits (154), Expect = 5e-10
Identities = 43/155 (27%), Positives = 77/155 (48%), Gaps = 18/155 (11%)
Query: 300 IQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQ----------GH--- 346
+ GH +EVF +++ L+++ D+ A IW++ N S Q GH
Sbjct: 174 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 233
Query: 347 -SKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILA-HNSIVSQVKFNKQNGGY 404
+K + S+DW+ +G LA GS DG ++W + GN+ + L H + +K+NK+ G Y
Sbjct: 234 SNKDVTSLDWNSDGTLLAMGSYDGFARIW--TENGNLASTLGQHKGPIFALKWNKK-GNY 290
Query: 405 LVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSID 439
++S+G DK I++ ++ H + +D
Sbjct: 291 VLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVD 325
Score = 62.8 bits (151), Expect = 1e-09
Identities = 43/205 (20%), Positives = 84/205 (40%), Gaps = 51/205 (24%)
Query: 304 HSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGK------------------------- 338
H +F+L ++ G+ V +AG+D +IWD +G+
Sbjct: 275 HKGPIFALKWNKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFAS 334
Query: 339 ----------------NIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNV 382
+ + QGH+ + ++ W +G LAS S D T+K+W +++ V
Sbjct: 335 CSTDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACV 394
Query: 383 ETILAHNSIVSQVKF--------NKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDK 434
+ AH+ + +K+ N + L S+ +D V +++ + +L H +
Sbjct: 395 HDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEP 454
Query: 435 VMSIDIV--GPDIYSAGWDRSVNKW 457
V S+ G + S +D+ V+ W
Sbjct: 455 VYSVAFSPDGKYLASGSFDKYVHIW 479
Score = 54.7 bits (130), Expect = 3e-07
Identities = 36/163 (22%), Positives = 69/163 (42%), Gaps = 10/163 (6%)
Query: 223 KISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNS------ 276
+++ + W + C+ D + I+ + V L + ++ P
Sbjct: 361 EVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPN 420
Query: 277 ---FIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWD 333
+ S SFD T L D + H V+S++F DG +++ D IW+
Sbjct: 421 SSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWN 480
Query: 334 IRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDI 376
+SG + S QG + I+ V W+ G ++ + + DG++ V D+
Sbjct: 481 TQSGSLVHSYQG-TGGIFEVCWNARGDKVGASASDGSVCVLDL 522
>CE11192 [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 925
Score = 82.0 bits (201), Expect = 2e-15
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 10/185 (5%)
Query: 279 GSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGK 338
GST+ W + ++ ++ Q+ HS + + + DGSL++T D IW+ RS
Sbjct: 337 GSTAQLVVW---EWQSESYVMKQQAHSLRITTAEYSPDGSLMATGAEDGKVKIWNSRSSF 393
Query: 339 NIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFN 398
++ H+ + +V W+Q+G + S S DGT++ D+++ N T++
Sbjct: 394 CTVTFDEHTSGVTAVKWTQSGRAILSASLDGTVRAHDLKRYRNFRTLVCPEP-TQLATLA 452
Query: 399 KQNGGYLVSSGYDKKVNI----FNDGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRSV 454
G LV +G + NI F G+ + L GH + SIDI G I S WDR++
Sbjct: 453 VDKAGDLVIAGAKEVFNIYIWSFETGHLLD--ILSGHESAISSIDIHGNHIVSGSWDRTI 510
Query: 455 NKWGV 459
W +
Sbjct: 511 KMWTI 515
>At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 974
Score = 81.3 bits (199), Expect = 3e-15
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 2/176 (1%)
Query: 243 GRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQE 302
G I ++D + V+ + + + V HP F+ S S D + DT K+ I +
Sbjct: 29 GVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYK 88
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH+ + ++ F DG V + GLD + +WD+ +GK + + H PI S+D+ + L
Sbjct: 89 GHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLL 148
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN 418
A+GS D T+K WD+ + T + V + F+ G + G D + +++
Sbjct: 149 ATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPD--GQTLFCGLDDGLKVYS 202
Score = 76.3 bits (186), Expect = 9e-14
Identities = 37/116 (31%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH++ V S++F+++ LV + +WD+ K + + GH +V++ G L
Sbjct: 5 GHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFL 64
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN 418
ASGS D ++VWD RKKG ++T H +S ++F+ +G ++VS G D V +++
Sbjct: 65 ASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFS-PDGRWVVSGGLDNVVKVWD 119
Score = 53.5 bits (127), Expect = 6e-07
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 5/120 (4%)
Query: 341 MSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQ 400
MSL GH+ P+ SV ++ + +G+ G IK+WD+ + V H S S V+F+
Sbjct: 1 MSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFH-P 59
Query: 401 NGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPD---IYSAGWDRSVNKW 457
G +L S D + +++ ++ +GH + +I+ PD + S G D V W
Sbjct: 60 FGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEF-SPDGRWVVSGGLDNVVKVW 118
>At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 282
Score = 80.9 bits (198), Expect = 4e-15
Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 5/191 (2%)
Query: 190 GGDLMACGSWSGN--LSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCT--HDGRI 245
GGD W+ SL+ N Y +SL G + + DS + V G I
Sbjct: 54 GGDDYKVNLWAIGKPTSLMKNDAIAFYW-QSLCGHTSAVDSVAFDSAEVLVLAGASSGVI 112
Query: 246 VIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHS 305
++D + V+ + + + V HP F+ S S D + D K+ I +GHS
Sbjct: 113 KLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHS 172
Query: 306 AEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASG 365
+ ++ F DG V + GLD + +WD+ +GK + + H PI S+D+ + LA+G
Sbjct: 173 RGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATG 232
Query: 366 SGDGTIKVWDI 376
S D T+K WD+
Sbjct: 233 SADRTVKFWDL 243
Score = 78.2 bits (191), Expect = 2e-14
Identities = 38/116 (32%), Positives = 65/116 (55%), Gaps = 1/116 (0%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH++ V S++F + LV + +WD+ K + + GH +V++ G L
Sbjct: 86 GHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFL 145
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN 418
ASGS D +K+WDIRKKG ++T H+ +S ++F +G ++VS G D V +++
Sbjct: 146 ASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFT-PDGRWVVSGGLDNVVKVWD 200
Score = 57.4 bits (137), Expect = 4e-08
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 18/171 (10%)
Query: 242 DGRIVIYDSGDETTVKILYKNDAR--FAQVRCHPCNSFIGSTSFDKTWILI--------- 290
D ++ ++ G T+ L KNDA + Q C S + S +FD +L+
Sbjct: 57 DYKVNLWAIGKPTS---LMKNDAIAFYWQSLCGH-TSAVDSVAFDSAEVLVLAGASSGVI 112
Query: 291 ---DTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHS 347
D + + GH + ++ FH G +++ DA IWDIR I + +GHS
Sbjct: 113 KLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHS 172
Query: 348 KPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFN 398
+ I ++ ++ +G + SG D +KVWD+ + H + + F+
Sbjct: 173 RGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFH 223
>7296209 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 700
Score = 80.9 bits (198), Expect = 4e-15
Identities = 70/294 (23%), Positives = 118/294 (39%), Gaps = 65/294 (22%)
Query: 188 SPGGDLMACGSWSGNLSLVDNSLSKIYCNRSL-------------SGTKISGLDWSVDSK 234
+P DL+A GS + D S + N+ + S ++ LDW+ D
Sbjct: 364 NPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEVPSNKDVTSLDWNCDGS 423
Query: 235 NIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDT-- 292
+ ++DG I+ + D L ++ ++ + C ++I S DKT I+ D
Sbjct: 424 LLATGSYDGYARIWKT-DGRLASTLGQHKGPIFALKWNKCGNYILSAGVDKTTIIWDAST 482
Query: 293 --------------------VKQA-------------------PILIQEGHSAEVFSLSF 313
QA PI +GH+ EV ++ +
Sbjct: 483 GQCTQQFAFHSAPALDVDWQTNQAFASCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAIKW 542
Query: 314 HNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNG---------YQLAS 364
G L+++ D IW + + LQ HSK IY++ WS G LAS
Sbjct: 543 CPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILAS 602
Query: 365 GSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN 418
S D T+++WD+ + + T+ H V V F+ +G +L S +DK V+I++
Sbjct: 603 ASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFS-PDGKHLASGSFDKCVHIWS 655
Score = 59.3 bits (142), Expect = 1e-08
Identities = 37/165 (22%), Positives = 75/165 (45%), Gaps = 10/165 (6%)
Query: 223 KISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPC-------- 274
+++ + W + + C+ D + I+ + L + ++ P
Sbjct: 536 EVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPN 595
Query: 275 -NSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWD 333
N + S SFD T L D + + I H+ V+S++F DG +++ D IW
Sbjct: 596 TNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIWS 655
Query: 334 IRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRK 378
++G+ + S +G + I+ V W+ G ++ + + DG++ V D+RK
Sbjct: 656 TQTGQLVHSYKG-TGGIFEVCWNSKGTKVGASASDGSVFVLDLRK 699
Score = 56.2 bits (134), Expect = 1e-07
Identities = 40/141 (28%), Positives = 72/141 (50%), Gaps = 19/141 (13%)
Query: 293 VKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQ-------- 344
+ ++ + GH +EVF +++ L+++ D+ A IWD+ S N S Q
Sbjct: 343 IPESKARVLRGHESEVFICAWNPSRDLLASGSGDSTARIWDM-SDANTNSNQLVLRHCIQ 401
Query: 345 ------GHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILA-HNSIVSQVKF 397
+K + S+DW+ +G LA+GS DG ++W + G + + L H + +K+
Sbjct: 402 KGGAEVPSNKDVTSLDWNCDGSLLATGSYDGYARIW--KTDGRLASTLGQHKGPIFALKW 459
Query: 398 NKQNGGYLVSSGYDKKVNIFN 418
NK G Y++S+G DK I++
Sbjct: 460 NK-CGNYILSAGVDKTTIIWD 479
>YBR198c [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 798
Score = 80.5 bits (197), Expect = 5e-15
Identities = 68/243 (27%), Positives = 113/243 (45%), Gaps = 13/243 (5%)
Query: 220 SGTKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYK-NDARFAQVRCHPCNSFI 278
SGT S +S D+K + + D + ++ S D T + YK ++ V P +
Sbjct: 525 SGTVYS-TSFSPDNKYLLSGSEDKTVRLW-SMDTHTALVSYKGHNHPVWDVSFSPLGHYF 582
Query: 279 GSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGK 338
+ S D+T L P+ I GH +V +SFH +G V T D +WD+ +G
Sbjct: 583 ATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGD 642
Query: 339 NIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAH-NSIVSQVKF 397
++ GH+ P+ S+ +G L++GS DG I VWDI ++ + H + + + +
Sbjct: 643 SVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSY 702
Query: 398 NKQNGGYLVSSGYDKKVNIFNDGNWIKERSLE------GHLDKVMSIDIVGPDIYSAGWD 451
+K+ G L+S G D V +++ E S E G+L V + + DI G
Sbjct: 703 SKE-GNVLISGGADHTVRVWDLKKATTEPSAEPDEPFIGYLGDVTA--SINQDIKEYGRR 759
Query: 452 RSV 454
R+V
Sbjct: 760 RTV 762
Score = 71.6 bits (174), Expect = 2e-12
Identities = 56/234 (23%), Positives = 99/234 (41%), Gaps = 10/234 (4%)
Query: 229 WSVDSKNIFVCTHDGRIVIY--DSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKT 286
WS+D ++ ++ I + D ++ T K L + P N ++ S S DKT
Sbjct: 493 WSLDGSSL----NNPNIALNNNDKDEDPTCKTLVGHSGTVYSTSFSPDNKYLLSGSEDKT 548
Query: 287 WILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGH 346
L ++ +GH+ V+ +SF G +TA D A +W + GH
Sbjct: 549 VRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGH 608
Query: 347 SKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLV 406
+ V + NG + +GS D T ++WD+ +V L H + V + +G +L
Sbjct: 609 LNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAV-CPDGRWLS 667
Query: 407 SSGYDKKVNIFNDGNWIKERSLEGHLDKV---MSIDIVGPDIYSAGWDRSVNKW 457
+ D +N+++ G + + + GH +S G + S G D +V W
Sbjct: 668 TGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVW 721
>Hs5032159 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 577
Score = 80.5 bits (197), Expect = 5e-15
Identities = 67/257 (26%), Positives = 109/257 (42%), Gaps = 16/257 (6%)
Query: 173 GMQVIDEKPISEINTSPGGDLMACGSWSG--NLSLVDNSLSKIYCNRSLSGTKISGLDWS 230
G V K ++ ++ + G L+A GS+ G + D +L+ I L W+
Sbjct: 282 GHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTLGQHK---GPIFALKWN 338
Query: 231 VDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILI 290
I D +I+D+ + + A V N+ S S D +
Sbjct: 339 RKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQN-NTTFASCSTDMCIHVC 397
Query: 291 DTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPI 350
P+ +GH+ EV ++ + G L+++ D IW ++ I LQ H+K I
Sbjct: 398 RLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEI 457
Query: 351 YSVDWSQNG---------YQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQN 401
Y++ WS G LAS S D T+++WDI + T+ H V V F+ +
Sbjct: 458 YTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFS-PD 516
Query: 402 GGYLVSSGYDKKVNIFN 418
G YL S +DK V+I+N
Sbjct: 517 GKYLASGSFDKCVHIWN 533
Score = 65.1 bits (157), Expect = 2e-10
Identities = 43/155 (27%), Positives = 78/155 (49%), Gaps = 18/155 (11%)
Query: 300 IQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQ----------GH--- 346
+ GH +EVF +++ L+++ D+ A IW++ N S Q GH
Sbjct: 227 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 286
Query: 347 -SKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILA-HNSIVSQVKFNKQNGGY 404
+K + S+DW+ NG LA+GS DG ++W + GN+ + L H + +K+N++ G Y
Sbjct: 287 SNKDVTSLDWNTNGTLLATGSYDGFARIW--TEDGNLASTLGQHKGPIFALKWNRK-GNY 343
Query: 405 LVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSID 439
++S+G DK I++ ++ H + +D
Sbjct: 344 ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVD 378
Score = 64.7 bits (156), Expect = 3e-10
Identities = 42/205 (20%), Positives = 85/205 (40%), Gaps = 51/205 (24%)
Query: 304 HSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSG-------------------------- 337
H +F+L ++ G+ + +AG+D +IWD +G
Sbjct: 328 HKGPIFALKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFAS 387
Query: 338 ---------------KNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNV 382
+ + + QGH+ + ++ W +G LAS S D T+K+W ++++ +
Sbjct: 388 CSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCI 447
Query: 383 ETILAHNSIVSQVKF--------NKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDK 434
+ AHN + +K+ N + L S+ +D V +++ + +L H +
Sbjct: 448 HDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEP 507
Query: 435 VMSIDIV--GPDIYSAGWDRSVNKW 457
V S+ G + S +D+ V+ W
Sbjct: 508 VYSVAFSPDGKYLASGSFDKCVHIW 532
Score = 60.5 bits (145), Expect = 5e-09
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 10/165 (6%)
Query: 223 KISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPC-------- 274
+++ + W + C+ D + I+ E + L ++ ++ P
Sbjct: 414 EVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPN 473
Query: 275 -NSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWD 333
N + S SFD T L D + H V+S++F DG +++ D IW+
Sbjct: 474 SNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWN 533
Query: 334 IRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRK 378
+SG + S +G + I+ V W+ G ++ + + DG++ V D+RK
Sbjct: 534 TQSGNLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLDLRK 577
Score = 60.1 bits (144), Expect = 7e-09
Identities = 40/165 (24%), Positives = 76/165 (45%), Gaps = 11/165 (6%)
Query: 227 LDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKT 286
+DW ++ C+ D I + G + VK + ++ P + S S D T
Sbjct: 377 VDWQ-NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMT 435
Query: 287 WILIDTVKQAPILIQEGHSAEVFSLSFH---------NDGSLVSTAGLDAIALIWDIRSG 337
+ ++ I + H+ E++++ + N ++++A D+ +WDI G
Sbjct: 436 LKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERG 495
Query: 338 KNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNV 382
+L H +P+YSV +S +G LASGS D + +W+ + GN+
Sbjct: 496 VCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWN-TQSGNL 539
>Hs21071067 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 800
Score = 80.1 bits (196), Expect = 6e-15
Identities = 64/237 (27%), Positives = 106/237 (44%), Gaps = 25/237 (10%)
Query: 200 SGNLSLVDNS----LSKIYCNRSLSGTKIS--------GLDWSVDSKNIFVCTHDGRIVI 247
+ +LSL+D L +I ++ S KI G +S D + + DG + +
Sbjct: 510 ASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRL 569
Query: 248 YDSGDETTVKILYKN------DARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQ 301
+ S T + YK D +F+ P + S D+ L T P+ I
Sbjct: 570 W-SLQTFTCLVGYKGHNYPVWDTQFS-----PYGYYFVSGGHDRVARLWATDHYQPLRIF 623
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
GH A+V FH + + V+T D +WD+ +G + GH PI+S+ +S NG
Sbjct: 624 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 683
Query: 362 LASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN 418
LA+G+ DG + +WDI V + H V ++F++ +G L S D V +++
Sbjct: 684 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR-DGEILASGSMDNTVRLWD 739
Score = 75.9 bits (185), Expect = 1e-13
Identities = 38/109 (34%), Positives = 63/109 (56%)
Query: 270 RCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIA 329
R HP ++++ + S D+T L D + + I GH + SL+F +G ++T D
Sbjct: 634 RFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRV 693
Query: 330 LIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRK 378
L+WDI G + L+GH+ + S+ +S++G LASGS D T+++WD K
Sbjct: 694 LLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIK 742
Score = 71.2 bits (173), Expect = 3e-12
Identities = 51/213 (23%), Positives = 91/213 (41%), Gaps = 3/213 (1%)
Query: 247 IYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSA 306
I D + +KILY + P +++ S+S D T L ++ +GH+
Sbjct: 527 IMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNY 586
Query: 307 EVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGS 366
V+ F G + G D +A +W + + GH + + N +A+GS
Sbjct: 587 PVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGS 646
Query: 367 GDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKER 426
D T+++WD+ V H + + F+ NG +L + D +V +++ G+ +
Sbjct: 647 ADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDIGHGLMVG 705
Query: 427 SLEGHLDKVMSIDIV--GPDIYSAGWDRSVNKW 457
L+GH D V S+ G + S D +V W
Sbjct: 706 ELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 738
>Hs20357529 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 80.1 bits (196), Expect = 6e-15
Identities = 49/201 (24%), Positives = 93/201 (45%), Gaps = 9/201 (4%)
Query: 217 RSLSG--TKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPC 274
R+L G KI + W DS+ + + DG+++I+DS V + + P
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 275 NSFIGSTSFDKTWILIDT-VKQAPILIQE---GHSAEVFSLSFHNDGSLVSTAGLDAIAL 330
+F+ D + ++ + + GH+ + F +D +++++G D
Sbjct: 109 GNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCA 167
Query: 331 IWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNS 390
+WDI +G+ + GHS + S+ + +G SG+ D +IK+WD+R +T + H S
Sbjct: 168 LWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHES 227
Query: 391 IVSQVKFNKQNGGYLVSSGYD 411
++ V F GY ++G D
Sbjct: 228 DINAVAFFP--NGYAFTTGSD 246
>At3g18130 [T] KOG0279 G protein beta subunit-like protein
Length = 326
Score = 80.1 bits (196), Expect = 6e-15
Identities = 74/272 (27%), Positives = 128/272 (46%), Gaps = 24/272 (8%)
Query: 182 ISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTK-ISGLDWSVDSKNIFVCT 240
+ ++ S G GSW G L L D + + R + TK + + +S D++ I +
Sbjct: 66 VEDVVLSSDGQFALSGSWDGELRLWDLATGET-TRRFVGHTKDVLSVAFSTDNRQIVSAS 124
Query: 241 HDGRIVIYDSGDETTVKILYKNDARFAQVRC-----HPCNSFIGSTSFDKT---WILIDT 292
D I ++++ E I + D V C + I S S+DKT W L +
Sbjct: 125 RDRTIKLWNTLGECKYTIS-EGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNC 183
Query: 293 VKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYS 352
+ ++ GHS + +++ DGSL ++ G D + L+WD+ GK + SL+ S I+S
Sbjct: 184 KLRNSLV---GHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGS-IIHS 239
Query: 353 VDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDK 412
+ +S N Y L + + + +I++WD+ K VE + + + + K GG V +G K
Sbjct: 240 LCFSPNRYWLCAAT-ENSIRIWDLESKSVVEDL----KVDLKSEAEKNEGG--VGTGNQK 292
Query: 413 KVNIFNDGNWIKERS--LEGHLDKVMSIDIVG 442
KV NW + S G+ D V+ + +G
Sbjct: 293 KVIYCTSLNWSADGSTLFSGYTDGVVRVWGIG 324
Score = 63.9 bits (154), Expect = 5e-10
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 7/161 (4%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GHS V + +DG + D +WD+ +G+ GH+K + SV +S + Q+
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQI 120
Query: 363 ASGSGDGTIKVWDI--RKKGNVETILAHNSIVSQVKFNKQN-GGYLVSSGYDKKVNIFND 419
S S D TIK+W+ K + H VS V+F+ +VS+ +DK V ++N
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL 180
Query: 420 GNWIKERSLEGHLDKVMSIDIVGPD---IYSAGWDRSVNKW 457
N SL GH + ++ V PD S G D + W
Sbjct: 181 QNCKLRNSLVGHSGYLNTV-AVSPDGSLCASGGKDGVILLW 220
Score = 58.9 bits (141), Expect = 2e-08
Identities = 47/172 (27%), Positives = 76/172 (43%), Gaps = 13/172 (7%)
Query: 300 IQEGHSAEVFSLSFHNDGS-LVSTAGLDAIALIWDIRS-----GKNIMSLQGHSKPIYSV 353
I H+ V +++ D S ++ TA D ++W + G L GHS + V
Sbjct: 10 IMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDV 69
Query: 354 DWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKK 413
S +G SGS DG +++WD+ + H V V F+ N +VS+ D+
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDN-RQIVSASRDRT 128
Query: 414 VNIFNDGNWIKERSLE--GHLDKV----MSIDIVGPDIYSAGWDRSVNKWGV 459
+ ++N K E GH + V S + + P I SA WD++V W +
Sbjct: 129 IKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL 180
>Hs11055998 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 79.7 bits (195), Expect = 8e-15
Identities = 74/294 (25%), Positives = 120/294 (40%), Gaps = 56/294 (19%)
Query: 217 RSLSG--TKISGLDWSVDSKNIFVCTHDGRIVIYDS------------------------ 250
R+L G KI + W DS+ + + DG+++I+DS
Sbjct: 49 RTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPS 108
Query: 251 ------GDETTVKILYKNDARFAQVRCH----------PCNSFIG-----STSFDKTWIL 289
G + +Y R VR C F+ ++S D T L
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCAL 168
Query: 290 IDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKP 349
D GHS +V SLS D + DA + +WDIR G S GH
Sbjct: 169 WDIETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSD 228
Query: 350 IYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSI---VSQVKFNKQNGGYLV 406
I +V + NGY A+GS D T +++D+R + + +H++I ++ V F+K G L+
Sbjct: 229 INAVSFFPNGYAFATGSDDATCRLFDLRADQEL-LLYSHDNIICGITSVAFSK--SGRLL 285
Query: 407 SSGYDK-KVNIFNDGNWIKERSLEGHLDKVMSIDIV--GPDIYSAGWDRSVNKW 457
+GYD N+++ + L GH ++V + + G + + WD + W
Sbjct: 286 LAGYDDFNCNVWDTLKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIW 339
>SPAC630.14c [R] KOG0266 WD40 repeat-containing protein
Length = 586
Score = 79.3 bits (194), Expect = 1e-14
Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 9/174 (5%)
Query: 290 IDTVKQAPILIQEGHSAE----VFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQG 345
++T K +L +E E V S++F DG ++T D IWDI + L G
Sbjct: 315 VETGKLITLLQEESSKREGDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTG 374
Query: 346 HSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYL 405
H + IYS+D+S++G L SGSGD T+ +WD+ + G + IL + V+ V F+ +G ++
Sbjct: 375 HEQEIYSLDFSKDGKTLVSGSGDRTVCLWDV-EAGEQKLILHTDDGVTTVMFS-PDGQFI 432
Query: 406 VSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIV--GPDIYSAGWDRSVNKW 457
+ DK + I+ + E+ L GH + V S+ G + S D ++ W
Sbjct: 433 AAGSLDKVIRIWTSSGTLVEQ-LHGHEESVYSVAFSPDGKYLVSGSLDNTIKLW 485
Score = 76.6 bits (187), Expect = 7e-14
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 15/229 (6%)
Query: 224 ISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSF 283
+ + +S D K + D +I I+D + ++L ++ + + S S
Sbjct: 337 VRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSG 396
Query: 284 DKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSL 343
D+T L D LI V ++ F DG ++ LD + IW SG + L
Sbjct: 397 DRTVCLWDVEAGEQKLILHTDDG-VTTVMFSPDGQFIAAGSLDKVIRIWT-SSGTLVEQL 454
Query: 344 QGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNV------------ETILAHNSI 391
GH + +YSV +S +G L SGS D TIK+W+++ NV +T H
Sbjct: 455 HGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDF 514
Query: 392 VSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDI 440
+ V + +G +++S D+ + ++ + + +L+GH + V+S+ +
Sbjct: 515 ILSVTVS-PDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAV 562
Score = 73.6 bits (179), Expect = 6e-13
Identities = 63/244 (25%), Positives = 105/244 (42%), Gaps = 22/244 (9%)
Query: 182 ISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSG--TKISGLDWSVDSKNIFVC 239
+ + SP G +A G + + D + ++Y R L+G +I LD+S D K +
Sbjct: 337 VRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVY--RLLTGHEQEIYSLDFSKDGKTLVSG 394
Query: 240 THDGRIVIYD--SGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAP 297
+ D + ++D +G++ K++ D V P FI + S DK I I T
Sbjct: 395 SGDRTVCLWDVEAGEQ---KLILHTDDGVTTVMFSPDGQFIAAGSLDKV-IRIWTSSGTL 450
Query: 298 ILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNI------------MSLQG 345
+ GH V+S++F DG + + LD +W+++ N+ + G
Sbjct: 451 VEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTG 510
Query: 346 HSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYL 405
H I SV S +G + SGS D TI+ W + T+ HN+ V V + +
Sbjct: 511 HKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFA 570
Query: 406 VSSG 409
SG
Sbjct: 571 TGSG 574
>CE17845 [R] KOG0286 G-protein beta subunit
Length = 356
Score = 79.3 bits (194), Expect = 1e-14
Identities = 68/287 (23%), Positives = 126/287 (43%), Gaps = 53/287 (18%)
Query: 223 KISGLDWSVDSKNIFVCTHDGRIVIYDSGDE----------------------------- 253
K+ +DWS+D ++I + DG+++++D
Sbjct: 70 KVLCMDWSLDKRHIVSSSQDGKVIVWDGFTTNKEHALTMPTTWVMACAFSPSSQMIACGG 129
Query: 254 -----TTVKILYKNDA--RFAQVRCHP----CNSFIGSTSF------DKTWILIDTVKQA 296
+ V + +++D + QV H C +F+ S + D T + D
Sbjct: 130 LDNKCSVVPLSFEDDIIQKKRQVATHTSYMSCCTFLRSDNLILTGSGDSTCAIWDVESGQ 189
Query: 297 PILIQEGHSAEVFSLSFH--NDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVD 354
I GH+ +VF++ + G+ +AG D +L+WDIRSG+ + S +GH I +V
Sbjct: 190 LIQNFHGHTGDVFAIDVPKCDTGNTFISAGADKHSLVWDIRSGQCVQSFEGHEADINTVR 249
Query: 355 WSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVK-FNKQNGGYLVSSGY-DK 412
+ NG A+GS D T +++D+R V + SI+ V + G ++ +GY D
Sbjct: 250 FHPNGDAFATGSDDATCRLFDLRADRQV-CVYEKESILFPVNGVDFSLSGRILFAGYGDY 308
Query: 413 KVNIFNDGNWIKERSLEGHLDKVMSIDIV--GPDIYSAGWDRSVNKW 457
+V +++ + L GH +++ + G + SA WD ++ W
Sbjct: 309 RVGVWDSLKCARHSVLYGHENRISCLRTSPDGTAVCSASWDCTIRIW 355
>At4g29830 [R] KOG4155 FOG: WD40 repeat
Length = 321
Score = 79.0 bits (193), Expect = 1e-14
Identities = 60/208 (28%), Positives = 94/208 (44%), Gaps = 18/208 (8%)
Query: 267 AQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLD 326
A + HP S+S D + D A I + E +EV+ + F G++++ AG
Sbjct: 64 AALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVAGGS 123
Query: 327 AIAL-IWDIRSGKNIMSLQ-------------GHSKPIYSVDWSQNGYQLASGSGDGTIK 372
+ ++ +WD S + I +L K + SV WS NG +LA GS DGTI
Sbjct: 124 SASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDGTIC 183
Query: 373 VWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHL 432
V+D+ + + + HN V + F+ + L S D VN+ + S+ GH
Sbjct: 184 VFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHT 243
Query: 433 DKVMSIDIVGPD---IYSAGWDRSVNKW 457
V+S+D PD I + DR+V W
Sbjct: 244 SWVLSVD-ASPDGGAIATGSSDRTVRLW 270
Score = 65.1 bits (157), Expect = 2e-10
Identities = 44/143 (30%), Positives = 71/143 (48%), Gaps = 6/143 (4%)
Query: 282 SFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIM 341
S D T + D + + EGH+ V SL F V +G D + GK ++
Sbjct: 177 SMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLL 236
Query: 342 -SLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQ 400
S+ GH+ + SVD S +G +A+GS D T+++WD++ + ++T+ HN V V F
Sbjct: 237 GSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPP 296
Query: 401 NG-----GYLVSSGYDKKVNIFN 418
G G L S DK V++++
Sbjct: 297 GGTGVRAGRLASVSDDKSVSLYD 319
Score = 52.0 bits (123), Expect = 2e-06
Identities = 38/147 (25%), Positives = 67/147 (44%), Gaps = 1/147 (0%)
Query: 179 EKPISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWS-VDSKNIF 237
+K + + SP G +ACGS G + + D SK+ + L +S VD + +F
Sbjct: 158 KKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLF 217
Query: 238 VCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAP 297
+ DG + ++D+ +T + + + + V P I + S D+T L D +A
Sbjct: 218 SGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAA 277
Query: 298 ILIQEGHSAEVFSLSFHNDGSLVSTAG 324
I H+ +V+S++F G AG
Sbjct: 278 IQTMSNHNDQVWSVAFRPPGGTGVRAG 304
>At4g02730 [R] KOG0266 WD40 repeat-containing protein
Length = 333
Score = 79.0 bits (193), Expect = 1e-14
Identities = 49/164 (29%), Positives = 85/164 (50%), Gaps = 2/164 (1%)
Query: 256 VKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHN 315
+K L + A + V+ + + S S DKT IL + I EGHS+ + L++ +
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSS 95
Query: 316 DGSLVSTAGLDAIALIWDIRSGKNIMS-LQGHSKPIYSVDWSQNGYQLASGSGDGTIKVW 374
D +A D IWD RS + L+GH+ ++ V+++ + SGS D TI++W
Sbjct: 96 DSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIW 155
Query: 375 DIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN 418
+++ V I AH+ +S V FN+ +G +VS+ +D I++
Sbjct: 156 EVKTGKCVRMIKAHSMPISSVHFNR-DGSLIVSASHDGSCKIWD 198
Score = 75.9 bits (185), Expect = 1e-13
Identities = 76/285 (26%), Positives = 130/285 (44%), Gaps = 10/285 (3%)
Query: 182 ISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTH 241
IS + S G+L+A S + L + + + IS L WS DS +
Sbjct: 46 ISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASD 105
Query: 242 DGRIVIYDSGDE-TTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILI 300
D + I+D+ +K+L + V +P ++ I S SFD+T + + + +
Sbjct: 106 DCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRM 165
Query: 301 QEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYS-VDWSQNG 359
+ HS + S+ F+ DGSL+ +A D IWD + G + +L P S +S NG
Sbjct: 166 IKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNG 225
Query: 360 YQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQV--KFNKQNGGYLVSSGYDKKVNIF 417
+ + D T+K+ + ++ H + V + F+ NG Y+VS D V ++
Sbjct: 226 KFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLW 285
Query: 418 N-DGNWIKERSLEGHLDKVMSIDI--VGPDIYSAG--WDRSVNKW 457
+ I +R LEGH D V+S+ V +I S+G D+++ W
Sbjct: 286 DLQARNILQR-LEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 75.1 bits (183), Expect = 2e-13
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 4/159 (2%)
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
EGH+A + + F NDG+L+++A +D ++W + I +GHS I + WS + +
Sbjct: 40 EGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHY 99
Query: 362 LASGSGDGTIKVWDIRKKGN-VETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDG 420
S S D T+++WD R ++ + H + V V FN + +VS +D+ + I+
Sbjct: 100 TCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPS-NLIVSGSFDETIRIWEVK 158
Query: 421 NWIKERSLEGHLDKVMSIDI--VGPDIYSAGWDRSVNKW 457
R ++ H + S+ G I SA D S W
Sbjct: 159 TGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIW 197
>Hs13376840 [R] KOG4155 FOG: WD40 repeat
Length = 305
Score = 78.2 bits (191), Expect = 2e-14
Identities = 67/254 (26%), Positives = 115/254 (44%), Gaps = 11/254 (4%)
Query: 168 QFSLKGMQVIDEKPISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGL 227
Q+SL+G Q+ + ++ S + A S ++ L D K + L
Sbjct: 57 QWSLEGHQL----GVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTL 112
Query: 228 DWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDAR---FAQVRCHPCNSFIGSTSFD 284
+S DS+ + TH G++ I+ G E+ K Y D R + P ++ S + D
Sbjct: 113 AFSPDSQYLATGTHVGKVNIF--GVESGKKE-YSLDTRGKFILSIAYSPDGKYLASGAID 169
Query: 285 KTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQ 344
+ D + EGH+ + SL+F D L+ TA D I+D++ +L
Sbjct: 170 GIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLS 229
Query: 345 GHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGY 404
GH+ + +V + + S S D ++KVWD+ + V T H V VK+N NG
Sbjct: 230 GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYN-GNGSK 288
Query: 405 LVSSGYDKKVNIFN 418
+VS G D++++I++
Sbjct: 289 IVSVGDDQEIHIYD 302
Score = 73.9 bits (180), Expect = 5e-13
Identities = 45/150 (30%), Positives = 79/150 (52%), Gaps = 3/150 (2%)
Query: 308 VFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSG 367
+ S+++ DG +++ +D I I+DI +GK + +L+GH+ PI S+ +S + L + S
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 368 DGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERS 427
DG IK++D++ T+ H S V V F + + VSS DK V +++ G +
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD-THFVSSSSDKSVKVWDVGTRTCVHT 269
Query: 428 LEGHLDKVMSIDI--VGPDIYSAGWDRSVN 455
H D+V + G I S G D+ ++
Sbjct: 270 FFDHQDQVWGVKYNGNGSKIVSVGDDQEIH 299
>At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 922
Score = 78.2 bits (191), Expect = 2e-14
Identities = 52/168 (30%), Positives = 83/168 (48%), Gaps = 7/168 (4%)
Query: 294 KQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSV 353
K IL GHS+ + S++F LV+ +WD+ K + +L GH SV
Sbjct: 48 KPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISV 107
Query: 354 DWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKK 413
D+ G ASGS D +K+WDIRKKG + T H V+ ++F +G ++VS G D
Sbjct: 108 DFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFT-PDGRWVVSGGEDNI 166
Query: 414 VNIFN--DGNWIKERSLEGHLDKVMSIDIVGPD--IYSAGWDRSVNKW 457
V +++ G + E + H ++ S+D + + + DR+V W
Sbjct: 167 VKVWDLTAGKLLTE--FKSHEGQIQSLDFHPHEFLLATGSADRTVKFW 212
Score = 77.0 bits (188), Expect = 5e-14
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 5/197 (2%)
Query: 225 SGLDW-SVDSKNIFVCTH--DGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGST 281
SG+D + D+ + V G I ++D + V+ L + + V HP F S
Sbjct: 60 SGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASG 119
Query: 282 SFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIM 341
S D + D K+ I +GH+ V L F DG V + G D I +WD+ +GK +
Sbjct: 120 SLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLT 179
Query: 342 SLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQN 401
+ H I S+D+ + + LA+GS D T+K WD+ + + + V + FN
Sbjct: 180 EFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPD- 238
Query: 402 GGYLVSSGYDKKVNIFN 418
G V G + + IF+
Sbjct: 239 -GKTVLCGLQESLKIFS 254
Score = 58.9 bits (141), Expect = 2e-08
Identities = 48/157 (30%), Positives = 68/157 (42%), Gaps = 4/157 (2%)
Query: 304 HSAEVFSLSFHNDGSLVS-TAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
HSA V L S V T G D +W I I+SL GHS I SV + + +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLV 74
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNW 422
A+G+ GTIK+WD+ + V T+ H S V F+ G + S D + I++
Sbjct: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFH-PFGEFFASGSLDTNLKIWDIRKK 133
Query: 423 IKERSLEGHLD--KVMSIDIVGPDIYSAGWDRSVNKW 457
+ +GH V+ G + S G D V W
Sbjct: 134 GCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVW 170
Score = 58.2 bits (139), Expect = 3e-08
Identities = 36/168 (21%), Positives = 73/168 (43%), Gaps = 2/168 (1%)
Query: 242 DGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQ 301
D ++ ++ G + LY + + V + + + T L D + +
Sbjct: 38 DHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTL 97
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
GH + S+ FH G ++ LD IWDIR I + +GH++ + + ++ +G
Sbjct: 98 TGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRW 157
Query: 362 LASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSG 409
+ SG D +KVWD+ + +H + + F+ +L+++G
Sbjct: 158 VVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHE--FLLATG 203
>At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 823
Score = 78.2 bits (191), Expect = 2e-14
Identities = 49/166 (29%), Positives = 80/166 (47%), Gaps = 3/166 (1%)
Query: 294 KQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSV 353
K IL GHS+ + S++F LV+ +WD+ K + +L GH SV
Sbjct: 141 KPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSV 200
Query: 354 DWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKK 413
++ G ASGS D +K+WDIRKKG + T H V+ ++F +G ++VS G D
Sbjct: 201 NFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFT-PDGRWIVSGGEDNV 259
Query: 414 VNIFNDGNWIKERSLEGHLDKVMSIDIVGPD--IYSAGWDRSVNKW 457
V +++ + H K+ S+D + + + D++V W
Sbjct: 260 VKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFW 305
Score = 75.9 bits (185), Expect = 1e-13
Identities = 41/134 (30%), Positives = 66/134 (48%)
Query: 243 GRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQE 302
G I ++D + V+ L + + V HP F S S D + D K+ I +
Sbjct: 174 GTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYK 233
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH+ V L F DG + + G D + +WD+ +GK + + H I S+D+ + + L
Sbjct: 234 GHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLL 293
Query: 363 ASGSGDGTIKVWDI 376
A+GS D T+K WD+
Sbjct: 294 ATGSADKTVKFWDL 307
Score = 61.2 bits (147), Expect = 3e-09
Identities = 39/178 (21%), Positives = 79/178 (43%), Gaps = 3/178 (1%)
Query: 242 DGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQ 301
D ++ ++ G + LY + + V + + + T L D + +
Sbjct: 131 DHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTL 190
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
GH + S++FH G ++ LD IWDIR I + +GH++ + + ++ +G
Sbjct: 191 TGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRW 250
Query: 362 LASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSG-YDKKVNIFN 418
+ SG D +KVWD+ + +H + + F+ +L+++G DK V ++
Sbjct: 251 IVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHE--FLLATGSADKTVKFWD 306
Score = 58.9 bits (141), Expect = 2e-08
Identities = 49/157 (31%), Positives = 68/157 (43%), Gaps = 4/157 (2%)
Query: 304 HSAEVFSLSFHNDGSLVS-TAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
HSA V L S V T G D +W I I+SL GHS I SV + + +
Sbjct: 108 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLV 167
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNW 422
A+G+ GTIK+WD+ + V T+ H S V F+ G + S D + I++
Sbjct: 168 AAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFH-PFGEFFASGSLDTNLKIWDIRKK 226
Query: 423 IKERSLEGHLD--KVMSIDIVGPDIYSAGWDRSVNKW 457
+ +GH V+ G I S G D V W
Sbjct: 227 GCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVW 263
>7292465 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 1326
Score = 78.2 bits (191), Expect = 2e-14
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 7/182 (3%)
Query: 278 IGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSG 337
I S S D T + V + GH+ V+S G+++ + D +WD+ SG
Sbjct: 1008 IVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQM--SGNIIISGSTDRTLKVWDMDSG 1065
Query: 338 KNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKF 397
+ +LQGH+ + + +G ++ SGS D T++VWDI + + ++ H + V V++
Sbjct: 1066 ACVHTLQGHTSTVRCMHL--HGSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQY 1123
Query: 398 NKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRSVNKW 457
+ G +VS YD V I++ +L+GH ++V S+ G + S D S+ W
Sbjct: 1124 D---GKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGLHVVSGSLDTSIRVW 1180
Query: 458 GV 459
V
Sbjct: 1181 DV 1182
Score = 65.1 bits (157), Expect = 2e-10
Identities = 57/229 (24%), Positives = 101/229 (43%), Gaps = 10/229 (4%)
Query: 191 GDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYDS 250
G+++ GS L + D + C +L G + + + + D + ++D
Sbjct: 1045 GNIIISGSTDRTLKVWD--MDSGACVHTLQGHTSTVRCMHLHGSKVVSGSRDATLRVWDI 1102
Query: 251 GDETTVKILYKNDARFAQVRCHPCNS-FIGSTSFDKTWILIDTVKQAPILIQEGHSAEVF 309
+ + +L A VRC + I S ++D + +Q + +GH+ V+
Sbjct: 1103 EQGSCLHVLV---GHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVY 1159
Query: 310 SLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDG 369
SL F DG V + LD +WD+ +G +L GH ++ QN L SG+ D
Sbjct: 1160 SLQF--DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQN--ILVSGNADS 1215
Query: 370 TIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN 418
T+KVWDI ++T+ N S V + N ++V+S D V +++
Sbjct: 1216 TVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRFVVTSSDDGTVKLWD 1264
Score = 62.4 bits (150), Expect = 1e-09
Identities = 45/184 (24%), Positives = 85/184 (45%), Gaps = 7/184 (3%)
Query: 276 SFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIR 335
+ I S S D+T + D A + +GH++ V + H GS V + DA +WDI
Sbjct: 1046 NIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLH--GSKVVSGSRDATLRVWDIE 1103
Query: 336 SGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQV 395
G + L GH + V + +G + SG+ D +K+W ++ + T+ H + V +
Sbjct: 1104 QGSCLHVLVGHLAAVRCVQY--DGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSL 1161
Query: 396 KFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRSVN 455
+F+ G ++VS D + +++ + +L GH +++ + S D +V
Sbjct: 1162 QFD---GLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQNILVSGNADSTVK 1218
Query: 456 KWGV 459
W +
Sbjct: 1219 VWDI 1222
>Hs21071065 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 745
Score = 77.8 bits (190), Expect = 3e-14
Identities = 53/192 (27%), Positives = 89/192 (45%), Gaps = 6/192 (3%)
Query: 229 WSVDSKNIFVCTHDGRIVIYDS-GDETTVKILYKNDARFAQVRC-HPCNSFIGSTSFDKT 286
WSV K + + + D D+ +I+ + A ++ H + S S D+
Sbjct: 497 WSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRL 556
Query: 287 WILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGH 346
W T P+ I GH A+V FH + + V+T D +WD+ +G + GH
Sbjct: 557 WA---TDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGH 613
Query: 347 SKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLV 406
PI+S+ +S NG LA+G+ DG + +WDI V + H V ++F++ +G L
Sbjct: 614 KGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR-DGEILA 672
Query: 407 SSGYDKKVNIFN 418
S D V +++
Sbjct: 673 SGSMDNTVRLWD 684
Score = 75.9 bits (185), Expect = 1e-13
Identities = 38/109 (34%), Positives = 63/109 (56%)
Query: 270 RCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIA 329
R HP ++++ + S D+T L D + + I GH + SL+F +G ++T D
Sbjct: 579 RFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRV 638
Query: 330 LIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRK 378
L+WDI G + L+GH+ + S+ +S++G LASGS D T+++WD K
Sbjct: 639 LLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIK 687
Score = 60.8 bits (146), Expect = 4e-09
Identities = 47/207 (22%), Positives = 84/207 (39%), Gaps = 16/207 (7%)
Query: 253 ETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLS 312
++TV++ + V+ S I S D ++D + + I GHS V+ S
Sbjct: 491 DSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGAS 550
Query: 313 FHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIK 372
F D +W + + GH + + N +A+GS D T++
Sbjct: 551 FSPDR-------------LWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 597
Query: 373 VWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHL 432
+WD+ V H + + F+ NG +L + D +V +++ G+ + L+GH
Sbjct: 598 LWDVLNGNCVRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDIGHGLMVGELKGHT 656
Query: 433 DKVMSIDIV--GPDIYSAGWDRSVNKW 457
D V S+ G + S D +V W
Sbjct: 657 DTVCSLRFSRDGEILASGSMDNTVRLW 683
>CE02186 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 77.4 bits (189), Expect = 4e-14
Identities = 72/294 (24%), Positives = 121/294 (40%), Gaps = 56/294 (19%)
Query: 217 RSLSG--TKISGLDWSVDSKNIFVCTHDGRIVIYDS------------------------ 250
R+L G KI + W+ DS+N+ + DG+++++DS
Sbjct: 49 RTLRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 251 ------GDETTVKILYKNDARFAQVRCH----------PCNSFIG-----STSFDKTWIL 289
G + +Y R VR C F+ ++S D T L
Sbjct: 109 GSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMTCAL 168
Query: 290 IDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKP 349
D GH+ +V SLS D + DA A +WDIR G + GH
Sbjct: 169 WDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESD 228
Query: 350 IYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSI---VSQVKFNKQNGGYLV 406
I +V + +G A+GS D T +++DIR + + +H++I ++ V F+K G L+
Sbjct: 229 INAVAFFPSGNAFATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSK--SGRLL 285
Query: 407 SSGYDK-KVNIFNDGNWIKERSLEGHLDKVMSIDIV--GPDIYSAGWDRSVNKW 457
+GYD N+++ + L GH ++V + + G + + WD + W
Sbjct: 286 FAGYDDFNCNVWDSMRQERAGVLAGHDNRVSCLGVTEDGMAVCTGSWDSFLKIW 339
>At1g18080 [T] KOG0279 G protein beta subunit-like protein
Length = 327
Score = 77.4 bits (189), Expect = 4e-14
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 15/213 (7%)
Query: 182 ISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTK-ISGLDWSVDSKNIFVCT 240
+ ++ S G GSW G L L D + + R + TK + + +S+D++ I +
Sbjct: 66 VEDVVLSSDGQFALSGSWDGELRLWDLAAG-VSTRRFVGHTKDVLSVAFSLDNRQIVSAS 124
Query: 241 HDGRIVIYDSGDETTVKILYKNDARFAQVRC-----HPCNSFIGSTSFDKT---WILIDT 292
D I ++++ E I + V C + I S S+DKT W L +
Sbjct: 125 RDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC 184
Query: 293 VKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYS 352
++ + GH+ V +++ DGSL ++ G D + L+WD+ GK + SL+ +S I++
Sbjct: 185 KLRSTLA---GHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANS-VIHA 240
Query: 353 VDWSQNGYQLASGSGDGTIKVWDIRKKGNVETI 385
+ +S N Y L + + G IK+WD+ K VE +
Sbjct: 241 LCFSPNRYWLCAATEHG-IKIWDLESKSIVEDL 272
Score = 63.5 bits (153), Expect = 6e-10
Identities = 50/162 (30%), Positives = 74/162 (44%), Gaps = 8/162 (4%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GHS V + +DG + D +WD+ +G + GH+K + SV +S + Q+
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQI 120
Query: 363 ASGSGDGTIKVWDIR---KKGNVETILAHNSIVSQVKFNKQN-GGYLVSSGYDKKVNIFN 418
S S D TIK+W+ K E H VS V+F+ +VS+ +DK V ++N
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWN 180
Query: 419 DGNWIKERSLEGHLDKVMSIDIVGPD---IYSAGWDRSVNKW 457
N +L GH V ++ V PD S G D V W
Sbjct: 181 LSNCKLRSTLAGHTGYVSTV-AVSPDGSLCASGGKDGVVLLW 221
Score = 58.9 bits (141), Expect = 2e-08
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 315 NDGSLVSTAGLDAIALIWDIRS-----GKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDG 369
++ ++ +A D ++W + G L GHS + V S +G SGS DG
Sbjct: 26 DNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG 85
Query: 370 TIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN---DGNWIKER 426
+++WD+ + + H V V F+ N +VS+ D+ + ++N + +
Sbjct: 86 ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDN-RQIVSASRDRTIKLWNTLGECKYTISE 144
Query: 427 SLEGHLDKV----MSIDIVGPDIYSAGWDRSVNKWGV 459
EGH D V S + + P I SA WD++V W +
Sbjct: 145 GGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNL 181
>YMR116c [T] KOG0279 G protein beta subunit-like protein
Length = 319
Score = 77.0 bits (188), Expect = 5e-14
Identities = 61/193 (31%), Positives = 87/193 (44%), Gaps = 15/193 (7%)
Query: 280 STSFDKT---WILI--DTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDI 334
S S DKT W L D P+ +GHS V + DG+ +A D +WD+
Sbjct: 35 SASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDV 94
Query: 335 RSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQ 394
+G+ GH + SVD + + SGS D TIKVW I K + T+L HN VSQ
Sbjct: 95 ATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI-KGQCLATLLGHNDWVSQ 153
Query: 395 VKF-----NKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPD---IY 446
V+ + ++S+G DK V +N + E GH + ++ PD I
Sbjct: 154 VRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTL-TASPDGTLIA 212
Query: 447 SAGWDRSVNKWGV 459
SAG D + W +
Sbjct: 213 SAGKDGEIMLWNL 225
>Hs11321585 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 76.6 bits (187), Expect = 7e-14
Identities = 72/293 (24%), Positives = 117/293 (39%), Gaps = 54/293 (18%)
Query: 217 RSLSG--TKISGLDWSVDSKNIFVCTHDGRIVIYDS------------------------ 250
R+L G KI + W DS+ + + DG+++I+DS
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 251 ------GDETTVKILYKNDARFAQVRCH----------PCNSFIG-----STSFDKTWIL 289
G + +Y R VR C F+ ++S D T L
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCAL 168
Query: 290 IDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKP 349
D GH+ +V SLS D L + DA A +WD+R G + GH
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD 228
Query: 350 IYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSI--VSQVKFNKQNGGYLVS 407
I ++ + NG A+GS D T +++D+R + T N I ++ V F+K G L+
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK--SGRLLL 286
Query: 408 SGYDK-KVNIFNDGNWIKERSLEGHLDKVMSIDIV--GPDIYSAGWDRSVNKW 457
+GYD N+++ + L GH ++V + + G + + WD + W
Sbjct: 287 AGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
>ECU02g1400 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 408
Score = 76.6 bits (187), Expect = 7e-14
Identities = 65/281 (23%), Positives = 122/281 (43%), Gaps = 6/281 (2%)
Query: 181 PISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCT 240
P++ + +P G + G+ +G +L + + + G++WS +F+ +
Sbjct: 99 PVNIVRWTPDGRRLMSGTATGEFTLWNGYGCNFETILQAHESPVRGMEWS--PSGLFLIS 156
Query: 241 HDG-RIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPIL 299
D I+ Y ++I+ + + +S S S D T + D+++
Sbjct: 157 SDNFGIIKYWHPSMNNIQIIQGHTEAVRDLSFSHNDSKFCSASDDSTIKIWDSIEAKEES 216
Query: 300 IQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNG 359
+ GH+ +V + +H SL+++AG D + +WD R+ + + +L H I ++ W +
Sbjct: 217 VLRGHNWDVRAAQWHKYKSLIASAGKDNLVKMWDPRTAEELCTLHHHKNTILALKWMGDE 276
Query: 360 YQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFND 419
L +G D IK+ DIR +V T H V+ + + VS G + + +
Sbjct: 277 NYLLTGGKDQVIKMVDIRTMTDVFTYKNHKKEVTSIGTHPCIPDIFVSGGTEGGIYFWQA 336
Query: 420 GNWIK-ERSLEGHLDKVMSIDI--VGPDIYSAGWDRSVNKW 457
+ E EGH V S+D VG + S D+SV W
Sbjct: 337 YTQVPLEVIEEGHEGTVWSLDYHPVGHILASGSVDQSVRFW 377
>Hs22052079 [R] KOG0266 WD40 repeat-containing protein
Length = 426
Score = 76.3 bits (186), Expect = 9e-14
Identities = 61/241 (25%), Positives = 114/241 (46%), Gaps = 17/241 (7%)
Query: 232 DSKNIFVCTHDGRIVIYDSGDETTVKILYK--NDARFAQVRCHPCNSFIGST-SFDKTWI 288
DS + ++D + +D T K+L+K D + P ++ S D
Sbjct: 156 DSSRVIAASYDKTVRAWDL---ETGKLLWKVRYDTFIVSCKFSPDGKYVVSGFDVDHGIC 212
Query: 289 LIDTVKQAPI-LIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSL-QGH 346
++D + +I++ H+ + S F D V++ LD IWD+ S ++++ + H
Sbjct: 213 IMDAENITTVSVIKDHHTRSITSCCFDPDSQRVASVSLDRCIKIWDVTSQATLLTITKAH 272
Query: 347 SKPIYSVDWSQNGYQLASGSGDGTIKVWDI-----RKKGNVETIL-AHNSIVSQVKFNKQ 400
S I + ++ +G+ L + S D +K+W++ R G T++ H VS F +
Sbjct: 273 SNAISNCCFTFSGHFLCTSSWDKNLKIWNVHTGEFRNCGACVTLMQGHEGSVSSCHFARD 332
Query: 401 NGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPD--IYSAGWDRSVNKWG 458
+ +L+S G+D+ V I++ ++ SL+GH D VM + I I SA DR++ W
Sbjct: 333 SS-FLISGGFDRTVAIWDVAEGYRKLSLKGHNDWVMDVAISNNKKWILSASKDRTMRLWN 391
Query: 459 V 459
+
Sbjct: 392 I 392
Score = 62.0 bits (149), Expect = 2e-09
Identities = 43/181 (23%), Positives = 80/181 (43%), Gaps = 7/181 (3%)
Query: 232 DSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNS-FIGSTSFDKTWILI 290
DS+ + + D I I+D + T+ + K + C + F+ ++S+DK +
Sbjct: 241 DSQRVASVSLDRCIKIWDVTSQATLLTITKAHSNAISNCCFTFSGHFLCTSSWDKNLKIW 300
Query: 291 DTVKQ------APILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQ 344
+ A + + +GH V S F D S + + G D IWD+ G +SL+
Sbjct: 301 NVHTGEFRNCGACVTLMQGHEGSVSSCHFARDSSFLISGGFDRTVAIWDVAEGYRKLSLK 360
Query: 345 GHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGY 404
GH+ + V S N + S S D T+++W+I + + ++ + V ++ Y
Sbjct: 361 GHNDWVMDVAISNNKKWILSASKDRTMRLWNIEEIDEIPLVIKYKKAVGLKLKQEKKEAY 420
Query: 405 L 405
L
Sbjct: 421 L 421
>Hs8922428 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 485
Score = 75.9 bits (185), Expect = 1e-13
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 297 PILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWS 356
P+ GH A + + F D +V++A D +WD R+GK + SL+GH +Y + WS
Sbjct: 364 PLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWS 423
Query: 357 QNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNI 416
+ L SGS D T+KVWD++ + + H V V ++ +G + S G DK + I
Sbjct: 424 ADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWS-PDGQRVASGGKDKCLRI 482
Query: 417 F 417
+
Sbjct: 483 W 483
Score = 73.6 bits (179), Expect = 6e-13
Identities = 36/113 (31%), Positives = 61/113 (53%)
Query: 262 NDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVS 321
+ A QV P + + S SFDK+ L D + GH A V+ +++ D L+
Sbjct: 371 HQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV 430
Query: 322 TAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVW 374
+ D+ +WD+++ K M L GH+ +Y+VDWS +G ++ASG D +++W
Sbjct: 431 SGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 73.2 bits (178), Expect = 8e-13
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 6/162 (3%)
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
EGHS V S++F G +++ D WD+ + + +GH + S+ WS +G +
Sbjct: 111 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKK 170
Query: 362 LASGSGDGTIKVWDIRKKGNV-ETILAHNSIVSQVKFNKQNGG----YLVSSGYDKKVNI 416
LASG +G I +WD V T+ H+ ++ + + + Y+ SS D V I
Sbjct: 171 LASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRI 230
Query: 417 FNDGNWIKERSLEGHLDKVMSIDIVGPD-IYSAGWDRSVNKW 457
++ ER L GH V + G +YSA DR++ W
Sbjct: 231 WDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVW 272
Score = 67.0 bits (162), Expect = 6e-11
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 10/166 (6%)
Query: 273 PCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIW 332
P ++ S S D T D + P +GH V S+S+ DG +++ + L+W
Sbjct: 124 PTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQILLW 183
Query: 333 DIRSGKNI-MSLQGHSKPIYSVDW-----SQNGYQLASGSGDGTIKVWDIRKKGNVETIL 386
D +GK + +L GHSK I + W + +AS S DG++++WD G E IL
Sbjct: 184 DPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWD-TTAGRCERIL 242
Query: 387 -AHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGH 431
H V+ +++ G L S+ D+ + ++ + + R+L+GH
Sbjct: 243 TGHTQSVTCLRWG--GDGLLYSASQDRTIKVWRAHDGVLCRTLQGH 286
>At2g43770 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 343
Score = 75.9 bits (185), Expect = 1e-13
Identities = 41/169 (24%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 295 QAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSG-KNIMSLQGHSKPIYSV 353
+API++ GH + V+++ F+ G+L+++ D +W + KN M L+GH I +
Sbjct: 43 EAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDL 102
Query: 354 DWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKK 413
W+ +G Q+ S S D T++ WD+ ++ + H+S V+ ++ ++S D
Sbjct: 103 HWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGT 162
Query: 414 VNIFNDGNWIKER-SLEGHLDK----VMSIDIVGPDIYSAGWDRSVNKW 457
+++ +++R +++ DK +S I++ G D V W
Sbjct: 163 AKLWD----MRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVW 207
Score = 56.2 bits (134), Expect = 1e-07
Identities = 34/131 (25%), Positives = 57/131 (42%), Gaps = 12/131 (9%)
Query: 277 FIGSTSFD-KTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIR 335
F G D K W D K + EGH + +S DGS + T G+D +WD+R
Sbjct: 196 FTGGVDNDVKVW---DLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMR 252
Query: 336 ----SGKNIMSLQGHS----KPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILA 387
+ + +GH K + WS +G ++ +GS D + +WD + + +
Sbjct: 253 PYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPG 312
Query: 388 HNSIVSQVKFN 398
H V++ F+
Sbjct: 313 HTGSVNECVFH 323
Score = 53.5 bits (127), Expect = 6e-07
Identities = 64/261 (24%), Positives = 108/261 (40%), Gaps = 18/261 (6%)
Query: 188 SPGGDLMACGSWSGNLSL--VDNSLSKIYCNRSLSGTKISGLD--WSVDSKNIFVCTHDG 243
+P G L+A GS + L V L G K + LD W+ D I + D
Sbjct: 62 NPAGTLIASGSHDREIFLWRVHGDCKNFMV---LKGHKNAILDLHWTSDGSQIVSASPDK 118
Query: 244 RIVIYDSGDETTVKILYKNDARFAQVRCHPCNS--FIGSTSFDKTWILIDTVKQAPILIQ 301
+ +D +K + ++ + F C I S S D T L D ++Q +
Sbjct: 119 TVRAWDVETGKQIKKMAEHSS-FVNSCCPTRRGPPLIISGSDDGTAKLWD-MRQRGAIQT 176
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
++ ++SF + + T G+D +WD+R G+ M+L+GH I + S +G
Sbjct: 177 FPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSY 236
Query: 362 LASGSGDGTIKVWDIRKKGNVETIL------AHNSIVSQVKFNKQNGGYLVSSG-YDKKV 414
L + D + VWD+R + HN + +K + G V++G D+ V
Sbjct: 237 LLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMV 296
Query: 415 NIFNDGNWIKERSLEGHLDKV 435
+I++ + L GH V
Sbjct: 297 HIWDTTSRRTIYKLPGHTGSV 317
>Hs9257257 [Z] KOG0318 WD40 repeat stress protein/actin interacting protein
Length = 606
Score = 75.5 bits (184), Expect = 2e-13
Identities = 74/296 (25%), Positives = 118/296 (39%), Gaps = 39/296 (13%)
Query: 188 SPGGDLMACGSWSGNLSLVDNSLSKI---YCNRSLSGTKISGLDWSVDSKNIFVCTHD-- 242
+P G +A G SG L + D + + Y + +G KI + W+ DSK I V
Sbjct: 67 APSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAG-KIKDIAWTEDSKRIAVVGEGRE 125
Query: 243 --GRIVIYDSGDET-----------TVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWIL 289
G + ++DSG +V I R A C +F F + +
Sbjct: 126 KFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPPFKFKFTI 185
Query: 290 IDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQG---H 346
D HS V + F DG+ +TA D I+D ++G+ + +L G H
Sbjct: 186 GD------------HSRFVNCVRFSPDGNRFATASADGQIYIYDGKTGEKVCALGGSKAH 233
Query: 347 SKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLV 406
IY++ WS + L S SGD T K+WD+ V T ++++ Q +L+
Sbjct: 234 DGGIYAISWSPDSTHLLSASGDKTSKIWDVSVNSVVSTFPMGSTVLDQQLGCLWQKDHLL 293
Query: 407 SSGYDKKVNIFNDGNWIKE-RSLEGHLDKVMSIDIVGPD----IYSAGWDRSVNKW 457
S +N + N K ++GH + + + IYS D +N W
Sbjct: 294 SVSLSGYINYLDRNNPSKPLHVIKGHSKSIQCLTVHKNGGKSYIYSGSHDGHINYW 349
>Hs4827056 [Z] KOG0318 WD40 repeat stress protein/actin interacting protein
Length = 534
Score = 75.5 bits (184), Expect = 2e-13
Identities = 74/296 (25%), Positives = 118/296 (39%), Gaps = 39/296 (13%)
Query: 188 SPGGDLMACGSWSGNLSLVDNSLSKI---YCNRSLSGTKISGLDWSVDSKNIFVCTHD-- 242
+P G +A G SG L + D + + Y + +G KI + W+ DSK I V
Sbjct: 67 APSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAG-KIKDIAWTEDSKRIAVVGEGRE 125
Query: 243 --GRIVIYDSGDET-----------TVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWIL 289
G + ++DSG +V I R A C +F F + +
Sbjct: 126 KFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPPFKFKFTI 185
Query: 290 IDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQG---H 346
D HS V + F DG+ +TA D I+D ++G+ + +L G H
Sbjct: 186 GD------------HSRFVNCVRFSPDGNRFATASADGQIYIYDGKTGEKVCALGGSKAH 233
Query: 347 SKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLV 406
IY++ WS + L S SGD T K+WD+ V T ++++ Q +L+
Sbjct: 234 DGGIYAISWSPDSTHLLSASGDKTSKIWDVSVNSVVSTFPMGSTVLDQQLGCLWQKDHLL 293
Query: 407 SSGYDKKVNIFNDGNWIKE-RSLEGHLDKVMSIDIVGPD----IYSAGWDRSVNKW 457
S +N + N K ++GH + + + IYS D +N W
Sbjct: 294 SVSLSGYINYLDRNNPSKPLHVIKGHSKSIQCLTVHKNGGKSYIYSGSHDGHINYW 349
>At5g67320 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 613
Score = 75.5 bits (184), Expect = 2e-13
Identities = 72/305 (23%), Positives = 124/305 (40%), Gaps = 45/305 (14%)
Query: 172 KGMQVIDEKPISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSV 231
KG K ++ ++ + G L+A GS G + + ++ S I L W+
Sbjct: 317 KGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLN-GELISTLSKHKGPIFSLKWNK 375
Query: 232 DSKNIFVCTHDGRIVIYDSGDET-----------TVKILYKNDARFAQVRCHPCNSFIGS 280
+ + D V++D E T+ + ++N+ FA +
Sbjct: 376 KGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFA------------T 423
Query: 281 TSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNI 340
+S D L + P GH EV + + GSL+++ D+ A IW+I+ +
Sbjct: 424 SSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFV 483
Query: 341 MSLQGHSKPIYSVDWSQNG---------YQLASGSGDGTIKVWDIRKKGNVETILAHNSI 391
L+ H+K IY++ WS G LAS S D T+K+WD + + H
Sbjct: 484 HDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREP 543
Query: 392 VSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWD 451
V + F+ NG Y+ S DK ++I++ IKE K++ I+ W+
Sbjct: 544 VYSLAFSP-NGEYIASGSLDKSIHIWS----IKE-------GKIVKTYTGNGGIFEVCWN 591
Query: 452 RSVNK 456
+ NK
Sbjct: 592 KEGNK 596
Score = 63.9 bits (154), Expect = 5e-10
Identities = 42/164 (25%), Positives = 81/164 (48%), Gaps = 19/164 (11%)
Query: 293 VKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDI--------RSGKNIMSL- 343
+ + + I EGH++EV + ++ SL+++ DA A IW I +G+NI +L
Sbjct: 253 IPNSDVRILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALI 312
Query: 344 --------QGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQV 395
SK + ++DW+ G LA+GS DG ++W + + + T+ H + +
Sbjct: 313 LKHAKGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLNGE-LISTLSKHKGPIFSL 371
Query: 396 KFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSID 439
K+NK+ G YL++ D+ +++ ++ E H + +D
Sbjct: 372 KWNKK-GDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVD 414
Score = 62.8 bits (151), Expect = 1e-09
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 305 SAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLAS 364
S +V +L ++ +G+L++T D A IW + +G+ I +L H PI+S+ W++ G L +
Sbjct: 324 SKDVTTLDWNGEGTLLATGSCDGQARIWTL-NGELISTLSKHKGPIFSLKWNKKGDYLLT 382
Query: 365 GSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIK 424
GS D T VWD++ + + H+ V + +N +S D + + G
Sbjct: 383 GSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDW--RNNVSFATSSTDSMIYLCKIGETRP 440
Query: 425 ERSLEGHLDKVMSI--DIVGPDIYSAGWDRSVNKWGV 459
++ GH +V + D G + S D + W +
Sbjct: 441 AKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNI 477
Score = 59.3 bits (142), Expect = 1e-08
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 13/165 (7%)
Query: 304 HSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLA 363
H +FSL ++ G + T +D A++WD+++ + + HS P VDW +N A
Sbjct: 364 HKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDW-RNNVSFA 422
Query: 364 SGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWI 423
+ S D I + I + +T H V+ VK++ G L S D I+N
Sbjct: 423 TSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWD-PTGSLLASCSDDSTAKIWNIKQST 481
Query: 424 KERSLEGHLDKVMSI--DIVGP---------DIYSAGWDRSVNKW 457
L H ++ +I GP + SA +D +V W
Sbjct: 482 FVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLW 526
Score = 58.2 bits (139), Expect = 3e-08
Identities = 40/164 (24%), Positives = 71/164 (42%), Gaps = 10/164 (6%)
Query: 223 KISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNS------ 276
+++ + W + C+ D I++ T V L ++ +R P
Sbjct: 450 EVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPN 509
Query: 277 ---FIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWD 333
+ S SFD T L D + GH V+SL+F +G +++ LD IW
Sbjct: 510 KQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWS 569
Query: 334 IRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIR 377
I+ GK + + G+ I+ V W++ G ++A+ D ++ V D R
Sbjct: 570 IKEGKIVKTYTGNGG-IFEVCWNKEGNKIAACFADNSVCVLDFR 612
>SPBC354.03 [R] KOG0266 WD40 repeat-containing protein
Length = 380
Score = 75.1 bits (183), Expect = 2e-13
Identities = 58/239 (24%), Positives = 111/239 (46%), Gaps = 12/239 (5%)
Query: 214 YCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHP 273
YC ++ + S + + I + DG I I+ + L+ + +QV+
Sbjct: 47 YCTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWAT 106
Query: 274 CNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWD 333
+ ++ S S DKT + D K+ + +GH+ V S+ F+ G+L+ + D IW+
Sbjct: 107 GSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWN 166
Query: 334 IRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAH-NSIV 392
++ G + L HS+PI SV S +G A+ S DG ++WD+ ++T++ N +
Sbjct: 167 LQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPL 226
Query: 393 SQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWD 451
S ++F +N YL+ S + ++ +++ R + H++ YS WD
Sbjct: 227 SNLQFT-ENRKYLLVSNLNSQIRLWDYRRNRVVRIFDSHVN----------TRYSMSWD 274
Score = 73.6 bits (179), Expect = 6e-13
Identities = 50/211 (23%), Positives = 101/211 (47%), Gaps = 1/211 (0%)
Query: 179 EKPISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFV 238
EK ++ ++ SP +A S G + + ++ C IS + W+ SK +
Sbjct: 54 EKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLAS 113
Query: 239 CTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPI 298
+ D I I+D +V+ L + + + +P + + S S+D+T + + +
Sbjct: 114 ASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCL 173
Query: 299 LIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSL-QGHSKPIYSVDWSQ 357
+ HS + S+S DG+L +TA D +A IWD+ SG+ + +L + + P+ ++ +++
Sbjct: 174 RMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQFTE 233
Query: 358 NGYQLASGSGDGTIKVWDIRKKGNVETILAH 388
N L + + I++WD R+ V +H
Sbjct: 234 NRKYLLVSNLNSQIRLWDYRRNRVVRIFDSH 264
>CE21113 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 809
Score = 75.1 bits (183), Expect = 2e-13
Identities = 53/236 (22%), Positives = 96/236 (40%), Gaps = 2/236 (0%)
Query: 181 PISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCT 240
P+ + SP G + G +G +L + + + I L W+ + + +
Sbjct: 135 PVYSVCWSPEGKRLITGCQTGEFTLWNGTAFNFETILQAHDSAIRALKWASNEQWLLSAD 194
Query: 241 HDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILI 300
G + + D + P + + S D T + D + +
Sbjct: 195 QGGYVKYWQPNMNNAHMFSAHKDEAIRGLAFAPTDVKFATASDDGTARVWDFARYTEERV 254
Query: 301 QEGHSAEVFSLSFHNDGSLVSTAGLDAI--ALIWDIRSGKNIMSLQGHSKPIYSVDWSQN 358
GH AEV + +H L++T D IWD +SG + +LQ H + +V++++N
Sbjct: 255 LRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWDPKSGSCLATLQEHKSSVMAVEFNKN 314
Query: 359 GYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKV 414
G L +G D +K++DIR + T AH V + ++ + G VS G D +
Sbjct: 315 GNWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVISLAWHPIHEGLFVSGGGDGSI 370
>YNL317w [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 465
Score = 73.9 bits (180), Expect = 5e-13
Identities = 55/248 (22%), Positives = 106/248 (42%), Gaps = 8/248 (3%)
Query: 182 ISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTH 241
+ E TS D+M ++ G +++ + + + I + W+ + + + V T+
Sbjct: 54 VVEPETSYTIDIMPPNAYRGRDRVINLPSKFTHLSSNKVKHVIPAIQWTPEGRRLVVATY 113
Query: 242 DGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFD---KTWIL-IDTVKQAP 297
G ++++ T ++ +D+ ++ + ++ S D K W VK+
Sbjct: 114 SGEFSLWNASSFTFETLMQAHDSAVTTMKYSHDSDWMISGDADGMIKIWQPNFSMVKE-- 171
Query: 298 ILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQ 357
I H+ + ++F ++ S T D I IW+ +GK L GH + S DW
Sbjct: 172 --IDAAHTESIRDMAFSSNDSKFVTCSDDNILKIWNFSNGKQERVLSGHHWDVKSCDWHP 229
Query: 358 NGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIF 417
+AS S D +K+WD R + +IL V + +F G L++ DK +F
Sbjct: 230 EMGLIASASKDNLVKLWDPRSGNCISSILKFKHTVLKTRFQPTKGNLLMAISKDKSCRVF 289
Query: 418 NDGNWIKE 425
+ +KE
Sbjct: 290 DIRYSMKE 297
>YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 515
Score = 73.9 bits (180), Expect = 5e-13
Identities = 52/160 (32%), Positives = 82/160 (50%), Gaps = 17/160 (10%)
Query: 274 CNSFIGSTSF-------DKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLD 326
C++F TS D T + D Q P+ +GH V +S+ DG +++T +D
Sbjct: 148 CSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMD 207
Query: 327 AIALIWDIRSGKNI-MSLQGHSKPIYSVDWSQ-------NGYQLASGSGDGTIKVWDIRK 378
+WD +SG+ + +L+GHSK I S+ W + +LAS S DGTIK+WD
Sbjct: 208 NTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVS 267
Query: 379 KGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN 418
+ T+ H + VS VK+ Q G L S +D+ V +++
Sbjct: 268 RVCQYTMSGHTNSVSCVKWGGQ--GLLYSGSHDRTVRVWD 305
Score = 70.9 bits (172), Expect = 4e-12
Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 2/139 (1%)
Query: 280 STSFDKTWILIDTVKQA-PILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGK 338
+ S D T L + +K PI GH V ++F DG + +A D +WD R GK
Sbjct: 376 TASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGK 435
Query: 339 NIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFN 398
I + +GH +Y V WS + L S S D T+KVWD+R + + H V V ++
Sbjct: 436 FISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWS 495
Query: 399 KQNGGYLVSSGYDKKVNIF 417
+G + S G DK V ++
Sbjct: 496 -VDGKRVCSGGKDKMVRLW 513
Score = 65.5 bits (158), Expect = 2e-10
Identities = 33/102 (32%), Positives = 54/102 (52%)
Query: 273 PCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIW 332
P +I S SFD + L D I GH A V+ +++ +D L+ + D +W
Sbjct: 412 PDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVW 471
Query: 333 DIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVW 374
D+R+ K + L GH +Y+VDWS +G ++ SG D +++W
Sbjct: 472 DVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 63.9 bits (154), Expect = 5e-10
Identities = 45/168 (26%), Positives = 81/168 (47%), Gaps = 13/168 (7%)
Query: 303 GHSAEVFSLSF--HNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGY 360
GH + + +F H +V+ AG D A IWD + + +L+GH + V WS +G
Sbjct: 141 GHGSTILCSAFAPHTSSRMVTGAG-DNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGE 199
Query: 361 QLASGSGDGTIKVWDIRKKGNV--ETILAHNSIVSQVKF------NKQNGGYLVSSGYDK 412
+A+GS D TI++WD K G + + H+ ++ + + + L SS D
Sbjct: 200 VIATGSMDNTIRLWD-PKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDG 258
Query: 413 KVNIFNDGNWIKERSLEGHLDKVMSIDIVGPD-IYSAGWDRSVNKWGV 459
+ I++ + + + ++ GH + V + G +YS DR+V W +
Sbjct: 259 TIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQGLLYSGSHDRTVRVWDI 306
>SPBP22H7.07 [A] KOG0285 Pleiotropic regulator 1
Length = 473
Score = 73.9 bits (180), Expect = 5e-13
Identities = 62/235 (26%), Positives = 104/235 (43%), Gaps = 9/235 (3%)
Query: 224 ISG-LDW----SVDSKNIFVCTHDG--RIVIYDSGDETTVKILYKNDARFAQVRCHPCNS 276
ISG L W V+ N + CT G I I+D L + A + P +
Sbjct: 159 ISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHP 218
Query: 277 FIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRS 336
++ S DK D I GH + V++L H ++ TAG DA+A +WD+R+
Sbjct: 219 YLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRT 278
Query: 337 GKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVK 396
+N+ L GH + S+ + Q+ +GS D TI++WD+ + T+ H V +
Sbjct: 279 RQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALS 338
Query: 397 FNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWD 451
+ + S + K F +G ++ + EGH V ++ I ++ +G D
Sbjct: 339 LHPDEFTFASGSSDNIKHWKFPEGAFM--GNFEGHNAIVNTLSINSDNVMFSGAD 391
>CE14894 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 793
Score = 73.9 bits (180), Expect = 5e-13
Identities = 50/177 (28%), Positives = 90/177 (50%), Gaps = 11/177 (6%)
Query: 291 DTVKQAPILI----QEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIM----S 342
D V+Q P L H +V + +L++T G+D + +W + + K + +
Sbjct: 459 DFVEQLPKLTCSSTMVAHGKDVNCVDISESDALIATGGMDKLVKLWQVDTHKMQLGIAGT 518
Query: 343 LQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNG 402
L GH + + V +++N ++LAS SGD TIK+W+I +K ++TI H+ V +V F +N
Sbjct: 519 LSGHRRGVGDVKFAKNSHKLASCSGDMTIKIWNISEKSCLQTISGHSCAVFRVIF-ARND 577
Query: 403 GYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSI--DIVGPDIYSAGWDRSVNKW 457
L+S+ + I+ E S++ H DK+ S+ + + +AG D + W
Sbjct: 578 SQLISADSAGIIKIWTIKTADCECSIDAHTDKIWSLSKNHNESEFVTAGTDGRIVVW 634
>7301796 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 436
Score = 73.9 bits (180), Expect = 5e-13
Identities = 67/258 (25%), Positives = 107/258 (40%), Gaps = 21/258 (8%)
Query: 213 IYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCH 272
+Y SG ++ + S I + DG ++ + ++ Y + A H
Sbjct: 144 VYLQSGGSGNNLTTFS-IIFSDKIVTGSFDGTAKVWSATSGQSLCTFYGHTAELVAAEFH 202
Query: 273 PCNS-FIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALI 331
P + I + S D + + D + H AEV + F+ DG ++ T D A I
Sbjct: 203 PVDGKSIATASLDGSARIYDVETSHELQQLTHHGAEVIAARFNRDGQMLLTGSFDHSAAI 262
Query: 332 WDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILA--HN 389
WD+RS L+GHS + + W+ +G +A+GS D T ++WD RK + E LA H+
Sbjct: 263 WDVRSKSLGHQLRGHSAELSNCVWNFSGSLIATGSLDNTARIWDTRKL-DQELYLAARHS 321
Query: 390 SIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLE--------GHLDKVMSI--D 439
V V F+ G L + D + W E S E GH D+V +
Sbjct: 322 DEVLDVSFDAA-GQLLATCSSDCTARV-----WRLEGSSELEMLSLMAGHSDEVSKVCFS 375
Query: 440 IVGPDIYSAGWDRSVNKW 457
G + +A D + W
Sbjct: 376 PSGCMLLTASADNTARLW 393
Score = 60.1 bits (144), Expect = 7e-09
Identities = 52/223 (23%), Positives = 91/223 (40%), Gaps = 6/223 (2%)
Query: 191 GDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYDS 250
G +A S G+ + D S + G ++ ++ D + + + D I+D
Sbjct: 206 GKSIATASLDGSARIYDVETSHELQQLTHHGAEVIAARFNRDGQMLLTGSFDHSAAIWDV 265
Query: 251 GDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVK-QAPILIQEGHSAEVF 309
++ L + A + + S I + S D T + DT K + + HS EV
Sbjct: 266 RSKSLGHQLRGHSAELSNCVWNFSGSLIATGSLDNTARIWDTRKLDQELYLAARHSDEVL 325
Query: 310 SLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQ---GHSKPIYSVDWSQNGYQLASGS 366
+SF G L++T D A +W + + L GHS + V +S +G L + S
Sbjct: 326 DVSFDAAGQLLATCSSDCTARVWRLEGSSELEMLSLMAGHSDEVSKVCFSPSGCMLLTAS 385
Query: 367 GDGTIKVWDIRKKGNVETILA-HNSIVSQVKFNKQNGGYLVSS 408
D T ++W + + G +LA H V ++ L +S
Sbjct: 386 ADNTARLW-LTESGQCSQVLAGHEGEVFSCAYSYAGDAILTAS 427
Score = 54.3 bits (129), Expect = 4e-07
Identities = 39/173 (22%), Positives = 78/173 (44%), Gaps = 24/173 (13%)
Query: 282 SFDKTWILIDTVKQAPILIQEGHSAEVFSLSFH---------NDGS-------------L 319
S+D+T +I+T I GH VFS+ F+ + GS
Sbjct: 106 SYDRTCHVINTQTAQVEHILSGHDNVVFSVGFNFPHWLVYLQSGGSGNNLTTFSIIFSDK 165
Query: 320 VSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQ-NGYQLASGSGDGTIKVWDIRK 378
+ T D A +W SG+++ + GH+ + + ++ +G +A+ S DG+ +++D+
Sbjct: 166 IVTGSFDGTAKVWSATSGQSLCTFYGHTAELVAAEFHPVDGKSIATASLDGSARIYDVET 225
Query: 379 KGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGH 431
++ + H + V +FN+ +G L++ +D I++ + L GH
Sbjct: 226 SHELQQLTHHGAEVIAARFNR-DGQMLLTGSFDHSAAIWDVRSKSLGHQLRGH 277
>7290895 [R] KOG0286 G-protein beta subunit
Length = 358
Score = 73.9 bits (180), Expect = 5e-13
Identities = 76/314 (24%), Positives = 129/314 (40%), Gaps = 58/314 (18%)
Query: 202 NLSLVDNSLSKI-YCN----RSLSG--TKISGLDWSVDSKNIFVCTHDGRIVIYDS---- 250
NLS + L +I Y N + L G K+ DWS D ++I + DGR++I+D+
Sbjct: 44 NLSNIAERLEQIAYVNIKPRKVLKGHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAFTTN 103
Query: 251 -----------------------------GDETTVKILYKNDARFAQVR----------- 270
++ TV + ++ A+ R
Sbjct: 104 KEHAVTMPTTWIMACAYAPSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSC 163
Query: 271 CHPCNSF--IGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSF--HNDGSLVSTAGLD 326
C NS I + S D T L D + GHS +V ++ + G+ + D
Sbjct: 164 CIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCD 223
Query: 327 AIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETIL 386
+A IWD+RSG + S +GH + SV + G +A+GS D + +++D+R V
Sbjct: 224 RMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADREVAVFA 283
Query: 387 AHNSIVSQVKFNKQNGGYLVSSGY-DKKVNIFNDGNWIKERSLEGHLDKVMSIDIV--GP 443
+ I + G L+ +GY D VN+++ + L GH +KV + + G
Sbjct: 284 KESIIFGVNSVDFSVSGRLLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQVSPDGT 343
Query: 444 DIYSAGWDRSVNKW 457
+ + WD ++ W
Sbjct: 344 ALSTGSWDYTIRVW 357
>7299285 [R] KOG4155 FOG: WD40 repeat
Length = 331
Score = 73.6 bits (179), Expect = 6e-13
Identities = 54/237 (22%), Positives = 101/237 (41%), Gaps = 2/237 (0%)
Query: 182 ISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTH 241
+ + S G +A S + L D S + + +S +K + +
Sbjct: 88 VVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFGPVDLWTVQFSPCNKYVISGLN 147
Query: 242 DGRIVIYDSGDETTVKILYKNDARFA-QVRCHPCNSFIGSTSFDKTWILIDTVKQAPILI 300
DG+I +Y + L + ++ + P +I S + D + D +
Sbjct: 148 DGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQT 207
Query: 301 QEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGY 360
EGH+ V SL F + L+ TA D ++D+ + +L GH+ + V +S++G
Sbjct: 208 LEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGK 267
Query: 361 QLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIF 417
AS S D ++K+WD ++ + T H V V+++ N + S+ DK +NI+
Sbjct: 268 HFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVRYSPGN-DKVASASEDKSLNIY 323
Score = 58.5 bits (140), Expect = 2e-08
Identities = 36/137 (26%), Positives = 65/137 (47%)
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
+GH+ V S++ +DG ++++ LD+ +WD RSG L +++V +S
Sbjct: 82 KGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFGPVDLWTVQFSPCNKY 141
Query: 362 LASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGN 421
+ SG DG I ++ + +T+ A N + +G Y+ S D + IF+
Sbjct: 142 VISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIFDVAA 201
Query: 422 WIKERSLEGHLDKVMSI 438
++LEGH V S+
Sbjct: 202 GKVVQTLEGHAMPVRSL 218
>7293146 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 73.6 bits (179), Expect = 6e-13
Identities = 72/296 (24%), Positives = 122/296 (40%), Gaps = 60/296 (20%)
Query: 217 RSLSG--TKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKI---------------- 258
R+L G KI + W DS+N+ + DG+++++DS TT K+
Sbjct: 49 RTLRGHLAKIYAMHWGNDSRNLVSASQDGKLIVWDS--HTTNKVHAIPLRSSWVMTCAYA 106
Query: 259 ----------------LYKNDARFAQVRCH----------PCNSFIG-----STSFDKTW 287
+Y R VR C F+ ++S D +
Sbjct: 107 PSGSYVACGGLDNMCSIYNLKTREGNVRVSRELPGHGGYLSCCRFLDDNQIVTSSGDMSC 166
Query: 288 ILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHS 347
L D + GH+ +V +LS + DA A +WDIR G + GH
Sbjct: 167 GLWDIETGLQVTSFLGHTGDVMALSLAPQCKTFVSGACDASAKLWDIREGVCKQTFPGHE 226
Query: 348 KPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSI---VSQVKFNKQNGGY 404
I +V + NG A+GS D T +++DIR + + +H++I ++ V F+K G
Sbjct: 227 SDINAVTFFPNGQAFATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSK--SGR 283
Query: 405 LVSSGYDK-KVNIFNDGNWIKERSLEGHLDKVMSIDIV--GPDIYSAGWDRSVNKW 457
L+ +GYD N+++ + L GH ++V + + G + + WD + W
Sbjct: 284 LLLAGYDDFNCNVWDTMKAERSGILAGHDNRVSCLGVTENGMAVATGSWDSFLRVW 339
>7303694 [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 949
Score = 73.2 bits (178), Expect = 8e-13
Identities = 51/245 (20%), Positives = 110/245 (44%), Gaps = 14/245 (5%)
Query: 223 KISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTS 282
+++ +++ +K + V G +Y+ D + L +D + + ++ S
Sbjct: 310 QLTAANYNTRTKVLVVAFSSGAFYLYELPDVNMIHSLSISDYPISAALFNCTGDWVALAS 369
Query: 283 FDKTWILI-DTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIM 341
+ +L+ + + I+ Q+GHS+E+ +++ +DG ++T G D+ +W+ +S +
Sbjct: 370 REIGQLLVWEWQSEQYIMKQQGHSSEMTCIAYSSDGQFIATGGEDSKVKLWNTQSSFCFV 429
Query: 342 SLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQN 401
+ H+ + + +S+N L S S DGT++ +D+ + N T + N +
Sbjct: 430 TFSEHTSGVTGIQFSRNKKFLVSSSLDGTVRAFDVNRYRNFRTFTSPNPAQFSCVAVDYS 489
Query: 402 GGYLVSSGYDKKVNIFNDGNWIKERS-----LEGHLDKVMSIDI----VGPDIYSAGWDR 452
G +V+ G D +F+ W + + GH V+SI + S WD+
Sbjct: 490 GELVVAGGQD----VFDIFLWSVKTGKLLEIISGHEGPVVSIAFSPVATSSTLVSGSWDK 545
Query: 453 SVNKW 457
+V W
Sbjct: 546 TVKIW 550
Score = 51.6 bits (122), Expect = 2e-06
Identities = 60/284 (21%), Positives = 120/284 (42%), Gaps = 8/284 (2%)
Query: 177 IDEKPISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLS-GTKISGLDWSVDSKN 235
I + PIS + GD +A S LV S+ Y + ++++ + +S D +
Sbjct: 348 ISDYPISAALFNCTGDWVALASREIGQLLVWEWQSEQYIMKQQGHSSEMTCIAYSSDGQF 407
Query: 236 IFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQ 295
I D ++ ++++ ++ + ++ F+ S+S D T D +
Sbjct: 408 IATGGEDSKVKLWNTQSSFCFVTFSEHTSGVTGIQFSRNKKFLVSSSLDGTVRAFDVNRY 467
Query: 296 APILIQEGHSAEVFS-LSFHNDGSLVSTAGLDAIAL-IWDIRSGKNIMSLQGHSKPIYSV 353
+ FS ++ G LV G D + +W +++GK + + GH P+ S+
Sbjct: 468 RNFRTFTSPNPAQFSCVAVDYSGELVVAGGQDVFDIFLWSVKTGKLLEIISGHEGPVVSI 527
Query: 354 DWSQ--NGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYD 411
+S L SGS D T+K+W+ + + + S V+ V F+ +G + +
Sbjct: 528 AFSPVATSSTLVSGSWDKTVKIWNCLESNSEHETIDAVSDVTNVTFS-PSGEEIAVATLS 586
Query: 412 KKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRSVN 455
+ IF+ + + ++EG D +S + DI +A + N
Sbjct: 587 GNITIFDIKSAGQVTTIEGRND--LSAGRLETDIITARKNAQAN 628
>At3g21540 [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 949
Score = 72.8 bits (177), Expect = 1e-12
Identities = 87/401 (21%), Positives = 171/401 (41%), Gaps = 24/401 (5%)
Query: 75 ILSDPKARERVTRLVESTSKDQTKIDTERSKVDDED----EEFYTPASQQLIEMRKFLII 130
+L + +A+++ R + K +K+ E S + E E +S ++++ K L +
Sbjct: 292 VLDEAEAKQKAKRRLRRKEKKSSKVGDENSTANGEASAKIELADAVSSPTVLDVFKLLQV 351
Query: 131 YSMQRSKXXXXXXXXXXVSQNVKNVISKRRDLESKLKQFSLKGMQVIDEKPISEINTSPG 190
R K +++ + + + L+ +SLK + + K ++ +
Sbjct: 352 IRAGR-KISSFSFCPTAPKESLGTLALSLNN--NSLEFYSLKSSE--NAKTVTIEHQGHR 406
Query: 191 GDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSV--------DSKNIFVCTHD 242
D+ + N L+ S S++ +G+ + +D +K V T
Sbjct: 407 SDVRSVTLSEDNTLLMSTSHSEVKIWNPSTGSCLRTIDSGYGLCSLIVPQNKYGIVGTKS 466
Query: 243 GRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFD---KTWILIDTVKQAPIL 299
G + I D G T V+ + + + P +S + S D K W T K
Sbjct: 467 GVLEIIDIGSATKVEEVKAHGGTIWSITPIPNDSGFVTVSADHEVKFWEYQATKKLTVSN 526
Query: 300 IQEGH-SAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQN 358
++ + +V +++ D ++ A LD+ ++ + S K +SL GH P+ +D S +
Sbjct: 527 VKSMKMNDDVLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSD 586
Query: 359 GYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN 418
G + +GS D +K+W + ++I AH V VKF +N YL S G D+ V ++
Sbjct: 587 GELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKF-VRNTHYLFSIGKDRLVKYWD 645
Query: 419 DGNWIKERSLEGHLDKV--MSIDIVGPDIYSAGWDRSVNKW 457
+ +LEGH ++ ++I G + + DRS+ +W
Sbjct: 646 ADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRW 686
Score = 54.3 bits (129), Expect = 4e-07
Identities = 34/160 (21%), Positives = 76/160 (47%), Gaps = 1/160 (0%)
Query: 242 DGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQ 301
DG I I+D+ T + +R + S + S S D IL D V ++ +
Sbjct: 85 DGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRL 144
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
GH +V L F + G + ++ D +WD+ + + + GH ++SVD
Sbjct: 145 RGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERY 204
Query: 362 LASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQN 401
+ +GS D ++ + +++ + ++++ +S +++K ++++
Sbjct: 205 VVTGSADQELRFYAVKEYSSNGSLVS-DSNANEIKASEEH 243
Score = 53.1 bits (126), Expect = 8e-07
Identities = 38/137 (27%), Positives = 65/137 (46%), Gaps = 2/137 (1%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
G S V S++ + SLV+ D IWD G ++ H + ++ +++ G L
Sbjct: 63 GPSLAVTSIA-SSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSML 121
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNW 422
ASGS D I +WD+ + + + H V+ + F G LVSS DK + +++
Sbjct: 122 ASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVF-LDGGKKLVSSSKDKFLRVWDLETQ 180
Query: 423 IKERSLEGHLDKVMSID 439
+ + GH +V S+D
Sbjct: 181 HCMQIVSGHHSEVWSVD 197
>7293756 [R] KOG0286 G-protein beta subunit
Length = 346
Score = 72.8 bits (177), Expect = 1e-12
Identities = 60/286 (20%), Positives = 115/286 (39%), Gaps = 52/286 (18%)
Query: 223 KISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTS 282
K++ + ++ DS++ + DG+++I+D+ V+I+ A V P +F+
Sbjct: 61 KVNSVHFAGDSRHCVTGSLDGKLIIWDTWTANKVQIIPLRSAWVMTVAFSPSGNFVACGG 120
Query: 283 FDKTWILIDTVKQ----APILIQE--GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRS 336
D + D + +++E G+ + S F +DG L++ +G D WD+
Sbjct: 121 MDNQCTVYDVNNRDASGVAKMVKELMGYEGFLSSCRFLDDGHLITGSG-DMKICHWDLEK 179
Query: 337 GKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVK 396
G M GH+ I + S + +GS D T K+WD+R++G+ + H+ VS V
Sbjct: 180 GVKTMDFNGHAGDIAGLSLSPDMKTYITGSVDKTAKLWDVREEGHKQMFFGHDMDVSSVC 239
Query: 397 FN-------------------------------------------KQNGGYLVSSGYDKK 413
++ +G YL+ G +
Sbjct: 240 YHPSGFGFASCSEDQTARMYDLRADQQIAQYEPPQKNTGFTSCALSTSGRYLMCGGIEGN 299
Query: 414 VNIFNDGNWIKERSLEGHLDKVMSIDIV--GPDIYSAGWDRSVNKW 457
V+ ++ +L GH +++ I + G + S WD+ V W
Sbjct: 300 VHSWDTMKQRHTGTLSGHENRITCISLCPNGMCLASTSWDQQVRLW 345
Score = 52.8 bits (125), Expect = 1e-06
Identities = 59/247 (23%), Positives = 103/247 (40%), Gaps = 28/247 (11%)
Query: 188 SPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGT-----KISGLDWSVDSKNIFVCTHD 242
SP G+ +ACG ++ D + NR SG ++ G + + S D
Sbjct: 110 SPSGNFVACGGMDNQCTVYDVN------NRDASGVAKMVKELMGYEGFLSSCRFL---DD 160
Query: 243 GRIVIYDSGD--------ETTVKILYKND--ARFAQVRCHPCNSFIGSTSFDKTWILIDT 292
G ++ SGD E VK + N A + P + S DKT L D
Sbjct: 161 GHLIT-GSGDMKICHWDLEKGVKTMDFNGHAGDIAGLSLSPDMKTYITGSVDKTAKLWDV 219
Query: 293 VKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSK--PI 350
++ + GH +V S+ +H G ++ D A ++D+R+ + I + K
Sbjct: 220 REEGHKQMFFGHDMDVSSVCYHPSGFGFASCSEDQTARMYDLRADQQIAQYEPPQKNTGF 279
Query: 351 YSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGY 410
S S +G L G +G + WD K+ + T+ H + ++ + NG L S+ +
Sbjct: 280 TSCALSTSGRYLMCGGIEGNVHSWDTMKQRHTGTLSGHENRITCISL-CPNGMCLASTSW 338
Query: 411 DKKVNIF 417
D++V ++
Sbjct: 339 DQQVRLW 345
Score = 50.1 bits (118), Expect = 7e-06
Identities = 37/169 (21%), Positives = 73/169 (42%), Gaps = 12/169 (7%)
Query: 300 IQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNG 359
I +GH +V S+ F D T LD +IWD + + + S + +V +S +G
Sbjct: 54 ILKGHINKVNSVHFAGDSRHCVTGSLDGKLIIWDTWTANKVQIIPLRSAWVMTVAFSPSG 113
Query: 360 YQLASGSGDGTIKVWDIRKKG------NVETILAHNSIVSQVKFNKQNGGYLVSSGYDKK 413
+A G D V+D+ + V+ ++ + +S +F + G+L++ D K
Sbjct: 114 NFVACGGMDNQCTVYDVNNRDASGVAKMVKELMGYEGFLSSCRF--LDDGHLITGSGDMK 171
Query: 414 VNIFNDGNWIKERSLEGHLDKVMSIDIVGPDI---YSAGWDRSVNKWGV 459
+ ++ +K GH + + + PD+ + D++ W V
Sbjct: 172 ICHWDLEKGVKTMDFNGHAGDIAGLSL-SPDMKTYITGSVDKTAKLWDV 219
>SPBC32H8.07 [R] KOG0286 G-protein beta subunit
Length = 305
Score = 72.4 bits (176), Expect = 1e-12
Identities = 66/294 (22%), Positives = 128/294 (43%), Gaps = 8/294 (2%)
Query: 170 SLKGMQVIDEK--PISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGL 227
+++G +V+ K I +I+ S G + S + L + D S I
Sbjct: 10 NIQGTRVLKNKLGKIPDIDISTDGKYLLSASTNDVLLVWDLHTSNKVAFFEAPSVWIMTC 69
Query: 228 DWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTW 287
+S +K+I + V+YD+ + A F + + + + S DKT
Sbjct: 70 AFSPSTKSIAAGGLNNFCVVYDTSVPDADPVELVGHAGFVSCCKYVDDGHLLTGSGDKTC 129
Query: 288 ILIDTVKQAPILIQEGHSAEVFSLSF-HNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGH 346
+ D + I + +GH ++ SL F ++ +L T G D +A +WD+R+ + G+
Sbjct: 130 MFWDIEQAKAISVLKGHEMDIVSLDFLPSNPNLFVTGGCDKLAKLWDLRAAYCCATFPGN 189
Query: 347 SKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNV-ETILAHNSIVSQVKFNKQNGGYL 405
+ I S+ + + +G+ DG + +DIR + + +S ++ V F+K G L
Sbjct: 190 TSDINSISFFPSNADFVTGAEDGIARCFDIRASAEIFQYSSPSSSPINSVLFSK--SGKL 247
Query: 406 VSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIV--GPDIYSAGWDRSVNKW 457
+ DK +++ + SL GH +++ S+ + G + + WD V W
Sbjct: 248 LFIAKDKTCEVWDSISSKTITSLTGHENRISSLALTSDGTMLATGSWDECVRLW 301
>Hs5729852 [R] KOG0286 G-protein beta subunit
Length = 353
Score = 72.4 bits (176), Expect = 1e-12
Identities = 64/290 (22%), Positives = 115/290 (39%), Gaps = 53/290 (18%)
Query: 221 GTKISGLDWSVDSKNIFVCTHDGRIVIYDS-----GDETTVKILYKNDARFAQVRC---- 271
G K+ +DW D + I + DG+++++DS T+ + +A C
Sbjct: 63 GNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIAC 122
Query: 272 ----HPCN-----------------------SFIGSTSF------------DKTWILIDT 292
+ C+ +++ + SF D T L D
Sbjct: 123 GGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDV 182
Query: 293 VKQAPILIQEGHSAEVFSLSF--HNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPI 350
+ GH A+V L G+ + G D A++WD+RSG+ + + + H I
Sbjct: 183 ESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDI 242
Query: 351 YSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGY 410
SV + +G ASGS D T +++D+R V + I + G L+ +GY
Sbjct: 243 NSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGY 302
Query: 411 -DKKVNIFNDGNWIKERSLEGHLDKVMSIDIV--GPDIYSAGWDRSVNKW 457
D +N+++ + L GH ++V ++ + G S WD ++ W
Sbjct: 303 NDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 352
>Hs20336270 [R] KOG0286 G-protein beta subunit
Length = 395
Score = 72.4 bits (176), Expect = 1e-12
Identities = 64/290 (22%), Positives = 115/290 (39%), Gaps = 53/290 (18%)
Query: 221 GTKISGLDWSVDSKNIFVCTHDGRIVIYDS-----GDETTVKILYKNDARFAQVRC---- 271
G K+ +DW D + I + DG+++++DS T+ + +A C
Sbjct: 105 GNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIAC 164
Query: 272 ----HPCN-----------------------SFIGSTSF------------DKTWILIDT 292
+ C+ +++ + SF D T L D
Sbjct: 165 GGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDV 224
Query: 293 VKQAPILIQEGHSAEVFSLSF--HNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPI 350
+ GH A+V L G+ + G D A++WD+RSG+ + + + H I
Sbjct: 225 ESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDI 284
Query: 351 YSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGY 410
SV + +G ASGS D T +++D+R V + I + G L+ +GY
Sbjct: 285 NSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGY 344
Query: 411 -DKKVNIFNDGNWIKERSLEGHLDKVMSIDIV--GPDIYSAGWDRSVNKW 457
D +N+++ + L GH ++V ++ + G S WD ++ W
Sbjct: 345 NDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 394
>7302979 [S] KOG0295 WD40 repeat-containing protein
Length = 411
Score = 72.4 bits (176), Expect = 1e-12
Identities = 76/316 (24%), Positives = 130/316 (41%), Gaps = 32/316 (10%)
Query: 167 KQFSLKGMQVIDEKPISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISG 226
++FSL G + I+ + P LM S + + D + RSL G S
Sbjct: 100 EKFSLTGHRA----SITRVIFHPIFALMVSASEDATIRIWDFETGEY--ERSLKGHTDSV 153
Query: 227 LDWSVDS--KNIFVCTHDGRIVIYDSGDE-TTVKILYKNDARFAQVRCHPCNSFIGSTSF 283
D + D+ K + C+ D I ++D +K ++ +D + V P ++ S S
Sbjct: 154 QDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASR 213
Query: 284 DKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSL 343
D+T + + + GH V + H +GS+ +T D +W S + L
Sbjct: 214 DRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVEL 273
Query: 344 QGHSKPIYSVDWS--------------------QNGYQLASGSGDGTIKVWDIRKKGNVE 383
+ H + + W+ G LASGS D TI++WD+ +
Sbjct: 274 RDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLL 333
Query: 384 TILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDI--V 441
T+ H++ V + F+ G YLVS+ DK + +++ N ++L H SID
Sbjct: 334 TLSGHDNWVRGLAFH-PGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKA 392
Query: 442 GPDIYSAGWDRSVNKW 457
P + S D++V W
Sbjct: 393 HPYVISGSVDQTVKVW 408
Score = 57.4 bits (137), Expect = 4e-08
Identities = 34/106 (32%), Positives = 52/106 (48%)
Query: 272 HPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALI 331
H F+ S S DKT + D +L GH V L+FH G + +A D +
Sbjct: 306 HHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRV 365
Query: 332 WDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIR 377
WD+R+ + + +L H S+D+ + + SGS D T+KVW+ R
Sbjct: 366 WDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
>Hs4557741 [S] KOG0295 WD40 repeat-containing protein
Length = 410
Score = 72.0 bits (175), Expect = 2e-12
Identities = 53/184 (28%), Positives = 86/184 (45%), Gaps = 7/184 (3%)
Query: 278 IGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSG 337
+G K WI K A GH + V + FH S++ +A DA +WD +G
Sbjct: 85 LGQKRDPKEWIPRPPEKYA----LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG 140
Query: 338 KNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKF 397
+L+GH+ + + + +G LAS S D TIK+WD + + T+ H+ VS V
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 398 NKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSI--DIVGPDIYSAGWDRSVN 455
NG ++VS+ DK + ++ ++ GH + V + + G I S D++V
Sbjct: 201 -MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259
Query: 456 KWGV 459
W V
Sbjct: 260 VWVV 263
Score = 66.6 bits (161), Expect = 7e-11
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Query: 272 HPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALI 331
HP S + S S D T + D +GH+ V +SF + G L+++ D +
Sbjct: 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Query: 332 WDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSI 391
WD + + I ++ GH + SV NG + S S D TIK+W+++ V+T H
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 236
Query: 392 VSQVKFNKQNGGYLVSSGYDKKVNIF 417
V V+ N Q+G + S D+ V ++
Sbjct: 237 VRMVRPN-QDGTLIASCSNDQTVRVW 261
Score = 58.2 bits (139), Expect = 3e-08
Identities = 59/259 (22%), Positives = 108/259 (40%), Gaps = 27/259 (10%)
Query: 182 ISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGT--KISGLDWSVDSKNIFVC 239
+ +I+ G L+A S + L D C R++ G +S + + +I
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWD--FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSA 210
Query: 240 THDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKT---WILIDTVKQA 296
+ D I +++ VK + VR + + I S S D+T W++ +A
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Query: 297 PILIQEGHSAEVFSLSFHNDGSLVSTA------------------GLDAIALIWDIRSGK 338
+ E H E S + + S +S A D +WD+ +G
Sbjct: 271 ELREHE-HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 329
Query: 339 NIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFN 398
+M+L GH + V + G + S + D T++VWD + K ++T+ AH V+ + F+
Sbjct: 330 CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH 389
Query: 399 KQNGGYLVSSGYDKKVNIF 417
K Y+V+ D+ V ++
Sbjct: 390 K-TAPYVVTGSVDQTVKVW 407
Score = 52.0 bits (123), Expect = 2e-06
Identities = 28/101 (27%), Positives = 50/101 (48%)
Query: 277 FIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRS 336
F+ S S DKT + D ++ GH V + FH+ G + + D +WD ++
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 337 GKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIR 377
+ + +L H + S+D+ + + +GS D T+KVW+ R
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>YCR057c [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 923
Score = 71.6 bits (174), Expect = 2e-12
Identities = 58/227 (25%), Positives = 101/227 (43%), Gaps = 16/227 (7%)
Query: 243 GRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILI-DTVKQAPILIQ 301
G +YD D T ++ L V + ++ S +L+ + ++ IL Q
Sbjct: 282 GEFRLYDLPDFTLIQQLSMGQNPVNTVSVNQTGEWLAFGSSKLGQLLVYEWQSESYILKQ 341
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
+GH SL++ DGS V TA D +WDI SG + + + H+ + +V +++ G
Sbjct: 342 QGHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQV 401
Query: 362 LASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFN---KQNGGYLVSSG----YDKKV 414
+ S S DGT++ WD+ + N T +++FN G +V +G +D V
Sbjct: 402 MFSSSLDGTVRAWDLIRYRNFRTFTG----TERIQFNCLAVDPSGEVVCAGSLDNFDIHV 457
Query: 415 NIFNDGNWIKERSLEGHLDKV--MSIDIVGPDIYSAGWDRSVNKWGV 459
G + +L GH V +S + SA WD+++ W +
Sbjct: 458 WSVQTGQLLD--ALSGHEGPVSCLSFSQENSVLASASWDKTIRIWSI 502
Score = 65.5 bits (158), Expect = 2e-10
Identities = 60/272 (22%), Positives = 120/272 (44%), Gaps = 10/272 (3%)
Query: 166 LKQFSLKGMQVIDEKPISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSG-TKI 224
L F+L + + P++ ++ + G+ +A GS LV S+ Y +
Sbjct: 289 LPDFTLIQQLSMGQNPVNTVSVNQTGEWLAFGSSKLGQLLVYEWQSESYILKQQGHFDST 348
Query: 225 SGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFD 284
+ L +S D + + DG+I ++D + ++ + V+ + S+S D
Sbjct: 349 NSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQVMFSSSLD 408
Query: 285 KTWILIDTVKQAPILIQEGHSAEVFS-LSFHNDGSLVSTAGLDAIAL-IWDIRSGKNIMS 342
T D ++ G F+ L+ G +V LD + +W +++G+ + +
Sbjct: 409 GTVRAWDLIRYRNFRTFTGTERIQFNCLAVDPSGEVVCAGSLDNFDIHVWSVQTGQLLDA 468
Query: 343 LQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDI-RKKGNVETILAHNSIVSQVKFNKQN 401
L GH P+ + +SQ LAS S D TI++W I + VE I ++ +++ + +
Sbjct: 469 LSGHEGPVSCLSFSQENSVLASASWDKTIRIWSIFGRSQQVEPIEVYSDVLALSM--RPD 526
Query: 402 GGYLVSSGYDKKVNIFNDGNWIKERSLEGHLD 433
G + S +++IFN I++ G++D
Sbjct: 527 GKEVAVSTLKGQISIFN----IEDAKQVGNID 554
>7300397 [S] KOG0300 WD40 repeat-containing protein
Length = 487
Score = 71.6 bits (174), Expect = 2e-12
Identities = 52/188 (27%), Positives = 94/188 (49%), Gaps = 13/188 (6%)
Query: 282 SFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIM 341
S+D+T IL D P+ GH E+ +S H LV TA D +WD R +
Sbjct: 297 SWDRTAILWDVETGLPLQPLTGHDHELTHVSAHPTQRLVVTASRDTTFRLWDFREAIPAV 356
Query: 342 SL-QGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQ 400
S+ QGH++ + S ++++ ++ SGS D TIKVW++R + + +S V+++ +
Sbjct: 357 SVFQGHTETVTSSVFARDD-KVVSGSDDRTIKVWELRNMRSALATIRTDSSVNRLAVS-- 413
Query: 401 NGGYLVSSGYDKKVNIFNDGNW----IKERSLEGHLDKVMSI-----DIVGPDIYSAGWD 451
GG + ++++ +F+ + S +GH V S+ ++ D++S G+D
Sbjct: 414 TGGIIAIPHDNRQIRLFDLNGQRVARLPRTSRQGHRRMVSSVAWAEEPLLDCDLFSCGFD 473
Query: 452 RSVNKWGV 459
R V W +
Sbjct: 474 RRVFGWSI 481
Score = 50.8 bits (120), Expect = 4e-06
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH ++ ++ ++ TA D A IW + S + ++ QGH+ + S+ + Q +
Sbjct: 158 GHKDGIWQVAAKAGQPIIGTASADHTACIWGVESARCLLQYQGHAGSVNSIKFHQQRDLV 217
Query: 363 ASGSGDGTIKV------WDIRKKGN 381
+GSGDGT + W++ KKG+
Sbjct: 218 LTGSGDGTAHIWQAAVNWEVPKKGH 242
>Hs4504053 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 71.2 bits (173), Expect = 3e-12
Identities = 72/302 (23%), Positives = 126/302 (40%), Gaps = 72/302 (23%)
Query: 217 RSLSG--TKISGLDWSVDSKNIFVCTHDGRIVIYDS------------------------ 250
R+L G KI + W+ DSK + + DG+++++DS
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 251 -------------------GDETTVKILYKNDARFAQVRCHPC----NSFIGSTSFDKTW 287
E VK+ + A + C C ++ I ++S D T
Sbjct: 109 GNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSC--CRFLDDNNIVTSSGDTTC 166
Query: 288 IL--IDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQG 345
L I+T +Q + + GH+ + SL+ D +L + DA A +WD+R G + G
Sbjct: 167 ALWDIETGQQKTVFV--GHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTG 224
Query: 346 HSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSI---VSQVKFNKQNG 402
H I ++ + NG + +GS D + +++D+R + +H SI ++ V F+
Sbjct: 225 HESDINAICFFPNGEAICTGSDDASCRLFDLRADQEL-ICFSHESIICGITSVAFSL--S 281
Query: 403 GYLVSSGYDKKVNIFNDGNWIKERS-----LEGHLDKVMSIDIV--GPDIYSAGWDRSVN 455
G L+ +GYD FN W +S L GH ++V + + G + + WD +
Sbjct: 282 GRLLFAGYDD----FNCNVWDSMKSERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLK 337
Query: 456 KW 457
W
Sbjct: 338 IW 339
>At1g52360 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 926
Score = 71.2 bits (173), Expect = 3e-12
Identities = 60/204 (29%), Positives = 96/204 (46%), Gaps = 5/204 (2%)
Query: 242 DGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQ-APILI 300
D I +Y+ VK+ + V HP ++ S+S D L D K A I
Sbjct: 78 DMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQI 137
Query: 301 QEGHSAEVFSLSFH-NDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNG 359
EGHS V ++F+ D + ++A LD IW++ S +L H K + VD+ G
Sbjct: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
Query: 360 YQ--LASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIF 417
+ L +GS D T KVWD + K V+T+ H VS V F+ + +++ D V I+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPEL-PIIITGSEDGTVRIW 256
Query: 418 NDGNWIKERSLEGHLDKVMSIDIV 441
+ + E +L L++V +I +
Sbjct: 257 HATTYRLENTLNYGLERVWAIGYI 280
>At1g48630 [T] KOG0279 G protein beta subunit-like protein
Length = 326
Score = 71.2 bits (173), Expect = 3e-12
Identities = 69/270 (25%), Positives = 121/270 (44%), Gaps = 20/270 (7%)
Query: 182 ISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTK-ISGLDWSVDSKNIFVCT 240
+ ++ S G GSW G L L D + + R + TK + + +S D++ I +
Sbjct: 66 VQDVVLSSDGQFALSGSWDGELRLWDLATGES-TRRFVGHTKDVLSVAFSTDNRQIVSAS 124
Query: 241 HDGRIVIYDSGDETTVKILYKNDARFAQVRC-----HPCNSFIGSTSFDKT---WILIDT 292
D I ++++ E I + D V C + I S S+DKT W L +
Sbjct: 125 RDRTIKLWNTLGECKYTIS-EADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNC 183
Query: 293 VKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYS 352
+ + GHS + +++ DGSL ++ G D + L+WD+ GK + SL+ S I+S
Sbjct: 184 KLRNTLA---GHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGS-IIHS 239
Query: 353 VDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDK 412
+ +S N Y L + + + +I++WD+ K VE + ++ G Y
Sbjct: 240 LCFSPNRYWLCAAT-ENSIRIWDLESKSVVEDLKVDLKAEAEKTDGSTGIGNKTKVIYCT 298
Query: 413 KVNIFNDGNWIKERSLEGHLDKVMSIDIVG 442
+N DGN + G+ D V+ + +G
Sbjct: 299 SLNWSADGNTL----FSGYTDGVIRVWGIG 324
Score = 64.7 bits (156), Expect = 3e-10
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GHS V + +DG + D +WD+ +G++ GH+K + SV +S + Q+
Sbjct: 61 GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQI 120
Query: 363 ASGSGDGTIKVWDI--RKKGNVETILAHNSIVSQVKFNKQN-GGYLVSSGYDKKVNIFND 419
S S D TIK+W+ K + H VS V+F+ +VS+ +DK V ++N
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL 180
Query: 420 GNWIKERSLEGHLDKVMSIDIVGPD---IYSAGWDRSVNKW 457
N +L GH + ++ V PD S G D + W
Sbjct: 181 QNCKLRNTLAGHSGYLNTV-AVSPDGSLCASGGKDGVILLW 220
Score = 56.2 bits (134), Expect = 1e-07
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 315 NDGSLVSTAGLDAIALIWDIRS-----GKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDG 369
++ ++ T+ D ++W + G + GHS + V S +G SGS DG
Sbjct: 26 DNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDG 85
Query: 370 TIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKE--RS 427
+++WD+ + + H V V F+ N +VS+ D+ + ++N K
Sbjct: 86 ELRLWDLATGESTRRFVGHTKDVLSVAFSTDN-RQIVSASRDRTIKLWNTLGECKYTISE 144
Query: 428 LEGHLDKV----MSIDIVGPDIYSAGWDRSVNKWGV 459
+GH + V S + + P I SA WD++V W +
Sbjct: 145 ADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL 180
>CE27713 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 331
Score = 70.9 bits (172), Expect = 4e-12
Identities = 34/122 (27%), Positives = 63/122 (50%), Gaps = 1/122 (0%)
Query: 296 APILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDI-RSGKNIMSLQGHSKPIYSVD 354
AP ++ +GH E+++ F +DGS +++AG D +W++ +N L+GH I V
Sbjct: 27 APTMVLQGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVK 86
Query: 355 WSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKV 414
++ + L S D T++VWD+ + +H IV+ V N++ + S+ D V
Sbjct: 87 FNADSSHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMICSASDDGTV 146
Query: 415 NI 416
+
Sbjct: 147 MV 148
Score = 68.9 bits (167), Expect = 1e-11
Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 14/192 (7%)
Query: 276 SFIGSTSFDKTWILIDTVKQAP-ILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDI 334
SF+ S +D+ L + + + +GH + + F+ D S + +AG D +WD+
Sbjct: 49 SFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVKFNADSSHLVSAGTDKTVRVWDM 108
Query: 335 RSGKNIMSLQGHSKPIYSVDWSQNGYQ-LASGSGDGTIKVWDIRKKGNVETILAHNSIVS 393
+G I + + H+ + SVD ++ G Q + S S DGT+ V D+R K + + +
Sbjct: 109 ETGSCIRNFKSHTDIVNSVDVNRRGPQMICSASDDGTVMVHDMRSKEAAKKFICKYQ-QT 167
Query: 394 QVKFNKQNGGYLVSSGYDKKVNIF----NDGNWIKERSLEGHLDKVMSIDIV--GPDIYS 447
V FN ++ G D ++ ++ ND ++ L GH D + S+ + G + S
Sbjct: 168 AVTFN-DAADNVICGGIDNQIKVWDMLRNDVRYV----LSGHRDTITSLSVSHNGNFLLS 222
Query: 448 AGWDRSVNKWGV 459
D S+ W +
Sbjct: 223 NSMDCSLMSWDI 234
>7292737 [A] KOG0285 Pleiotropic regulator 1
Length = 482
Score = 70.9 bits (172), Expect = 4e-12
Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 3/225 (1%)
Query: 185 INTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGR 244
I PG + A G+ + + D + K+ + + + + G+ S +F C D +
Sbjct: 178 IAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLFSCGEDRQ 237
Query: 245 IVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGH 304
+ +D ++ + + + + HP + ++ D T + D +A + GH
Sbjct: 238 VKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHTLTGH 297
Query: 305 SAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLAS 364
+ V S+ + T D+ +WD+ +GK++ +L H K + S+ + Y AS
Sbjct: 298 TNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHPSLYMFAS 357
Query: 365 GSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSG 409
S D IK W + V+ I H SIV+ + N + G LVS G
Sbjct: 358 ASPD-NIKQWRCPEGKFVQNISGHTSIVNCMAANSE--GVLVSGG 399
Score = 53.1 bits (126), Expect = 8e-07
Identities = 41/157 (26%), Positives = 61/157 (38%), Gaps = 3/157 (1%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH V ++ +T D + IWD+ SGK +SL GH + V S L
Sbjct: 170 GHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYL 229
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNW 422
S D +K WD+ + H S V + + L +SG D I++
Sbjct: 230 FSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALH-PTIDVLATSGRDSTARIWDMRTK 288
Query: 423 IKERSLEGHLDKVMSI--DIVGPDIYSAGWDRSVNKW 457
+L GH + V S+ P I + D +V W
Sbjct: 289 ANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLW 325
>YBR175w [R] KOG0266 WD40 repeat-containing protein
Length = 315
Score = 70.5 bits (171), Expect = 5e-12
Identities = 57/184 (30%), Positives = 94/184 (50%), Gaps = 12/184 (6%)
Query: 245 IVIYDSGDETTVKILYKNDAR-FAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEG 303
I+IYD T + L + AR F+++ P I + S D + +I + + G
Sbjct: 36 ILIYDINRRTVSQTLVTSHARPFSELCWSPDGQCIATASDDFSVEIIH-LSYGLLHTFIG 94
Query: 304 HSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ-L 362
H+A V SL+F+ G+L+ T+ +D IWD +G + ++ HS+ + SVD N L
Sbjct: 95 HTAPVISLTFNRKGNLLFTSSMDESIKIWDTLNGSLMKTISAHSEAVVSVDVPMNDSSIL 154
Query: 363 ASGSGDGTIKVWDIRKKGNVETIL------AHNSIV--SQVKFNKQNGGYLVSSGYDKKV 414
+SGS DG I+++D ++T+ N +V SQVKF+ +N YL+ D V
Sbjct: 155 SSGSYDGLIRIFDAETGHCLKTLTYDKDWKRENGVVPISQVKFS-ENARYLLVKSLDGVV 213
Query: 415 NIFN 418
I++
Sbjct: 214 KIWD 217
>SPAC29E6.01 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 506
Score = 70.5 bits (171), Expect = 5e-12
Identities = 58/244 (23%), Positives = 103/244 (41%), Gaps = 19/244 (7%)
Query: 228 DWSVDSKNIFVCTHDGRIVIYDSGDETTVK-------ILYKNDARFAQVRCHPC---NSF 277
D+ +++ +D I++ S D T ILYK V C +
Sbjct: 216 DFRATLDSVYCVQYDDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNL 275
Query: 278 IGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSG 337
+ S S D T I+ D + P+ + GH+ V + + + ++ D A +W + +
Sbjct: 276 LVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSEN--YIISSSRDHTARVWRLDAT 333
Query: 338 KNIMS----LQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVS 393
+ L+GH + SV +S + + S D T++ WDI + I AH ++
Sbjct: 334 SPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIA 393
Query: 394 QVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRS 453
++N G ++VS D + IF + R L+GH D + ++ I S G+D +
Sbjct: 394 CAQYN---GKFIVSGSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRFNDEKIVSGGYDGT 450
Query: 454 VNKW 457
V W
Sbjct: 451 VRIW 454
Score = 55.5 bits (132), Expect = 2e-07
Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 9/150 (6%)
Query: 316 DGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWD 375
D ++ + D +WD+ S + L GHS + +D+ + L SGS D TI +WD
Sbjct: 230 DDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWD 289
Query: 376 IRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN-DGNWIKE---RSLEGH 431
+ + ++ H V V ++ Y++SS D ++ D E L GH
Sbjct: 290 WQNRRPLKVYFGHTDNVLGVVVSE---NYIISSSRDHTARVWRLDATSPAEACMHVLRGH 346
Query: 432 LDKVMSIDIVGPD--IYSAGWDRSVNKWGV 459
L V S+ I +A DR++ W +
Sbjct: 347 LASVNSVQYSSKTGLIVTASSDRTLRTWDI 376
>Hs4757988 [R] KOG0645 WD40 repeat protein
Length = 339
Score = 70.5 bits (171), Expect = 5e-12
Identities = 47/167 (28%), Positives = 82/167 (48%), Gaps = 8/167 (4%)
Query: 299 LIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSG--KNIMSLQGHSKPIYSVDWS 356
++ EGH V +++ G+ +++A DA IW + + +L+GH + SV W+
Sbjct: 55 VLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWA 114
Query: 357 QNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFN--KQNGGYLVSSGYDKKV 414
+G LA+ S D ++ VW++ ++ E + NS VK + L S+ YD V
Sbjct: 115 PSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTV 174
Query: 415 NIF--NDGNWIKERSLEGHLDKVMSI--DIVGPDIYSAGWDRSVNKW 457
++ + +W+ +LEGH V S+ D G + S DR+V W
Sbjct: 175 KLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIW 221
Score = 65.5 bits (158), Expect = 2e-10
Identities = 61/276 (22%), Positives = 108/276 (39%), Gaps = 48/276 (17%)
Query: 179 EKPISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSG--TKISGLDWSVDSKNI 236
++ + ++ SP G+ +A S+ + + C +L G ++ + W+ +
Sbjct: 61 QRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLL 120
Query: 237 FVCTHDGRIVIYDSGDETT---VKILYKNDARFAQVRCHPCNSFIGSTSFDKT------- 286
C+ D + +++ +E V +L + V HP + S S+D T
Sbjct: 121 ATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREE 180
Query: 287 ---WILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIW----------- 332
W+ T+ EGH + V+SL+F G +++ D IW
Sbjct: 181 EDDWVCCATL--------EGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGV 232
Query: 333 ----DIRSGKNIMSLQG-HSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETIL- 386
S K I +L G HS+ IY + W Q LA+ GD I+V+ + +
Sbjct: 233 ACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTF 292
Query: 387 --------AHNSIVSQVKFNKQNGGYLVSSGYDKKV 414
AH+ V+ V +N + G L S D +V
Sbjct: 293 SLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEV 328
>Hs16117781 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 707
Score = 70.5 bits (171), Expect = 5e-12
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 7/186 (3%)
Query: 274 CNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWD 333
C + I S S D T + V + GH+ V+S ++ ++ + D +W+
Sbjct: 390 CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWN 447
Query: 334 IRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVS 393
+G+ I +L GH+ + + + ++ SGS D T++VWDI + ++ H + V
Sbjct: 448 AETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 505
Query: 394 QVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRS 453
V+++ G +VS YD V +++ +L+GH ++V S+ G + S D S
Sbjct: 506 CVQYD---GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTS 562
Query: 454 VNKWGV 459
+ W V
Sbjct: 563 IRVWDV 568
Score = 63.9 bits (154), Expect = 5e-10
Identities = 38/120 (31%), Positives = 65/120 (53%), Gaps = 10/120 (8%)
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
+GH+ V+SL F DG V + LD +WD+ +G I +L GH ++ N
Sbjct: 538 QGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--I 593
Query: 362 LASGSGDGTIKVWDIRKKGNVETILA---HNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN 418
L SG+ D T+K+WDI+ ++T+ H S V+ ++FNK ++++S D V +++
Sbjct: 594 LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK---NFVITSSDDGTVKLWD 650
>Hs16117779 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 627
Score = 70.5 bits (171), Expect = 5e-12
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 7/186 (3%)
Query: 274 CNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWD 333
C + I S S D T + V + GH+ V+S ++ ++ + D +W+
Sbjct: 310 CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWN 367
Query: 334 IRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVS 393
+G+ I +L GH+ + + + ++ SGS D T++VWDI + ++ H + V
Sbjct: 368 AETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 425
Query: 394 QVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRS 453
V+++ G +VS YD V +++ +L+GH ++V S+ G + S D S
Sbjct: 426 CVQYD---GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTS 482
Query: 454 VNKWGV 459
+ W V
Sbjct: 483 IRVWDV 488
Score = 63.9 bits (154), Expect = 5e-10
Identities = 38/120 (31%), Positives = 65/120 (53%), Gaps = 10/120 (8%)
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
+GH+ V+SL F DG V + LD +WD+ +G I +L GH ++ N
Sbjct: 458 QGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--I 513
Query: 362 LASGSGDGTIKVWDIRKKGNVETILA---HNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN 418
L SG+ D T+K+WDI+ ++T+ H S V+ ++FNK ++++S D V +++
Sbjct: 514 LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK---NFVITSSDDGTVKLWD 570
>CE27762 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 585
Score = 70.5 bits (171), Expect = 5e-12
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 17/229 (7%)
Query: 243 GRIVIYDSGDETTV-------KILYKNDARFAQVRCHP-CNSFIGSTSFDKTWILIDTVK 294
GR ++ S D T +L+ + VRC S + + S D T + D
Sbjct: 306 GRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVES 365
Query: 295 QAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVD 354
+ GH A V + F DG+ V + G D IW+ +G+ I +L GH+ +YS+
Sbjct: 366 GRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLL 423
Query: 355 WSQNGYQLASGSGDGTIKVWDI-RKKGN--VETILAHNSIVSQVKFNKQNGGYLVSSGYD 411
+ + SGS D +I+VWD R +G V + H S+ S ++ G LVS D
Sbjct: 424 FESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQL---RGNILVSCNAD 480
Query: 412 KKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPD-IYSAGWDRSVNKWGV 459
V +++ L GH + S+ G + + ++ D +V W +
Sbjct: 481 SHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDI 529
Score = 69.3 bits (168), Expect = 1e-11
Identities = 52/239 (21%), Positives = 103/239 (42%), Gaps = 19/239 (7%)
Query: 235 NIFVCTHDGRIVIYDSGDETTVKI--LYKNDARFAQV---------RCHPCNSFIGSTSF 283
++ C V+ D+ T+K+ + K + + V + C +I S S
Sbjct: 255 HVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGST 314
Query: 284 DKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSL 343
D+T + TV + + +GH++ V ++ GS++ T D +WD+ SG+++ +L
Sbjct: 315 DRTVKVWSTVDGSLLHTLQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESGRHLATL 372
Query: 344 QGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGG 403
GH + V + +G + SG D T+K+W+ + T+ HN+ V + F +
Sbjct: 373 HGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESER-S 429
Query: 404 YLVSSGYDKKVNIFNDGNWIKERS---LEGHLDKVMSIDIVGPDIYSAGWDRSVNKWGV 459
+ S D + +++ + L+GH + + G + S D V W +
Sbjct: 430 IVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDI 488
Score = 61.6 bits (148), Expect = 2e-09
Identities = 46/181 (25%), Positives = 78/181 (42%), Gaps = 7/181 (3%)
Query: 277 FIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRS 336
++ + +K W + A + GH V + +D LV T D +W I
Sbjct: 228 YLRADKIEKNWNANPIMGSA---VLRGHEDHVITCMQIHDDVLV-TGSDDNTLKVWCIDK 283
Query: 337 GKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVK 396
G+ + +L GH+ +++ SQ G + SGS D T+KVW + T+ H S V+
Sbjct: 284 GEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGH---TSTVR 340
Query: 397 FNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRSVNK 456
G LV+ D + +++ + +L GH V + G + S G+D +V
Sbjct: 341 CMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKI 400
Query: 457 W 457
W
Sbjct: 401 W 401
Score = 53.5 bits (127), Expect = 6e-07
Identities = 34/153 (22%), Positives = 69/153 (44%), Gaps = 6/153 (3%)
Query: 241 HDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFD---KTWILIDTVKQAP 297
+D + I+++ ++ L ++ R + S + S S D + W Q
Sbjct: 394 YDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQEC 453
Query: 298 ILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQ 357
+ + +GH++ + G+++ + D+ +WDI G + L GH I S+ W
Sbjct: 454 VALLQGHTSLTSGMQLR--GNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFG 511
Query: 358 NGYQLASGSGDGTIKVWDIRKKGNVETILAHNS 390
+A+ S DGT+K+WDI + + ++ +S
Sbjct: 512 RN-MVATSSDDGTVKLWDIERGALIRDLVTLDS 543
>CE25007 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 587
Score = 70.5 bits (171), Expect = 5e-12
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 17/229 (7%)
Query: 243 GRIVIYDSGDETTV-------KILYKNDARFAQVRCHP-CNSFIGSTSFDKTWILIDTVK 294
GR ++ S D T +L+ + VRC S + + S D T + D
Sbjct: 308 GRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVES 367
Query: 295 QAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVD 354
+ GH A V + F DG+ V + G D IW+ +G+ I +L GH+ +YS+
Sbjct: 368 GRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLL 425
Query: 355 WSQNGYQLASGSGDGTIKVWDI-RKKGN--VETILAHNSIVSQVKFNKQNGGYLVSSGYD 411
+ + SGS D +I+VWD R +G V + H S+ S ++ G LVS D
Sbjct: 426 FESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQL---RGNILVSCNAD 482
Query: 412 KKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPD-IYSAGWDRSVNKWGV 459
V +++ L GH + S+ G + + ++ D +V W +
Sbjct: 483 SHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDI 531
Score = 69.3 bits (168), Expect = 1e-11
Identities = 52/239 (21%), Positives = 103/239 (42%), Gaps = 19/239 (7%)
Query: 235 NIFVCTHDGRIVIYDSGDETTVKI--LYKNDARFAQV---------RCHPCNSFIGSTSF 283
++ C V+ D+ T+K+ + K + + V + C +I S S
Sbjct: 257 HVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGST 316
Query: 284 DKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSL 343
D+T + TV + + +GH++ V ++ GS++ T D +WD+ SG+++ +L
Sbjct: 317 DRTVKVWSTVDGSLLHTLQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESGRHLATL 374
Query: 344 QGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGG 403
GH + V + +G + SG D T+K+W+ + T+ HN+ V + F +
Sbjct: 375 HGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESER-S 431
Query: 404 YLVSSGYDKKVNIFNDGNWIKERS---LEGHLDKVMSIDIVGPDIYSAGWDRSVNKWGV 459
+ S D + +++ + L+GH + + G + S D V W +
Sbjct: 432 IVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDI 490
Score = 61.6 bits (148), Expect = 2e-09
Identities = 46/181 (25%), Positives = 78/181 (42%), Gaps = 7/181 (3%)
Query: 277 FIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRS 336
++ + +K W + A + GH V + +D LV T D +W I
Sbjct: 230 YLRADKIEKNWNANPIMGSA---VLRGHEDHVITCMQIHDDVLV-TGSDDNTLKVWCIDK 285
Query: 337 GKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVK 396
G+ + +L GH+ +++ SQ G + SGS D T+KVW + T+ H S V+
Sbjct: 286 GEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGH---TSTVR 342
Query: 397 FNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRSVNK 456
G LV+ D + +++ + +L GH V + G + S G+D +V
Sbjct: 343 CMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKI 402
Query: 457 W 457
W
Sbjct: 403 W 403
Score = 53.5 bits (127), Expect = 6e-07
Identities = 34/153 (22%), Positives = 69/153 (44%), Gaps = 6/153 (3%)
Query: 241 HDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFD---KTWILIDTVKQAP 297
+D + I+++ ++ L ++ R + S + S S D + W Q
Sbjct: 396 YDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQEC 455
Query: 298 ILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQ 357
+ + +GH++ + G+++ + D+ +WDI G + L GH I S+ W
Sbjct: 456 VALLQGHTSLTSGMQLR--GNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFG 513
Query: 358 NGYQLASGSGDGTIKVWDIRKKGNVETILAHNS 390
+A+ S DGT+K+WDI + + ++ +S
Sbjct: 514 RN-MVATSSDDGTVKLWDIERGALIRDLVTLDS 545
>CE06090 [T] KOG0279 G protein beta subunit-like protein
Length = 325
Score = 70.5 bits (171), Expect = 5e-12
Identities = 50/174 (28%), Positives = 82/174 (46%), Gaps = 17/174 (9%)
Query: 302 EGHSAEVFSLSFH--NDGSLVSTAGLDAIALIWDIRS---------GKNIMSLQGHSKPI 350
EGH+ V ++ + ND + V ++ D L+WD+ S G+ + SL GH+ +
Sbjct: 13 EGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFV 72
Query: 351 YSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGY 410
V S +G SGS D T+++WD+ + + ++H V V F+ N +VS
Sbjct: 73 SDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNR-QIVSGSR 131
Query: 411 DKKVNIFNDGNWIKERSLEG-HLDKVMSIDIV----GPDIYSAGWDRSVNKWGV 459
DK + ++N K + H D V ++ P I SAGWD+ V W +
Sbjct: 132 DKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNL 185
Score = 70.1 bits (170), Expect = 7e-12
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 15/192 (7%)
Query: 280 STSFDKTWILIDTVKQAPI---------LIQEGHSAEVFSLSFHNDGSLVSTAGLDAIAL 330
S+S DKT ++ D AP+ GH+ V + +DG + D
Sbjct: 35 SSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLR 94
Query: 331 IWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWD-IRKKGNVETILAHN 389
+WD+ G + H+K + SV +S + Q+ SGS D +IK+W+ + + T H
Sbjct: 95 LWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHT 154
Query: 390 SIVSQVKFNKQN-GGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPD---I 445
VS V+F+ N +VS+G+DK V ++N GN + + GH V ++ V PD
Sbjct: 155 DWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTV-TVSPDGSLC 213
Query: 446 YSAGWDRSVNKW 457
S G D W
Sbjct: 214 ASGGKDGQAMLW 225
Score = 65.1 bits (157), Expect = 2e-10
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 13/211 (6%)
Query: 182 ISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTK-ISGLDWSVDSKNIFVCT 240
+S++ S G GSW L L D + + + +S TK + + +S D++ I +
Sbjct: 72 VSDVVISSDGQFALSGSWDKTLRLWDLNQG-VSTRQFISHTKDVLSVAFSADNRQIVSGS 130
Query: 241 HDGRIVIYDSGDETTVKIL------YKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVK 294
D I ++++ + I + + RF+ P G K W L +
Sbjct: 131 RDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRL 190
Query: 295 QAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVD 354
+ + GH+ V +++ DGSL ++ G D A++WD+ GK++ +L G+ I ++
Sbjct: 191 KTNHI---GHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGND-VINAMS 246
Query: 355 WSQNGYQLASGSGDGTIKVWDIRKKGNVETI 385
+S N Y L + G +IK+WD+ K +E +
Sbjct: 247 FSPNRYWLCAAVG-SSIKIWDLEDKKEIEEL 276
>7294830 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 942
Score = 70.5 bits (171), Expect = 5e-12
Identities = 65/255 (25%), Positives = 116/255 (45%), Gaps = 2/255 (0%)
Query: 187 TSPGGDLMACGSWS-GNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRI 245
TSP +++ C ++S GN L ++S SL +K+ + + KN+
Sbjct: 549 TSPSDEVVICATFSEGNSMLALGTVSSKVYVFSLKPSKLVQVKAAQWLKNLDTGMAGVDK 608
Query: 246 VIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHS 305
+ D + T + LY + +P + F+ + S D + L + + ++I GH
Sbjct: 609 DMIDPIKKFTRRTLYGHQGPVYGCSFNPEDRFLITCSEDFSVRLWCLLSWSCVVIFSGHL 668
Query: 306 AEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASG 365
A V + F G +TA D A +W + K LQGH + + N + +A+G
Sbjct: 669 APVCFVVFAPRGYYFATASDDCTARVWMQDNTKPARILQGHLAELGVCLFHPNRHYMATG 728
Query: 366 SGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKE 425
S D T+++WDI K V H S ++ + ++ G YLVS G D + I++ N I
Sbjct: 729 SADCTVRIWDIVKAVQVRIFRGHKSRITALIYS-ICGRYLVSGGDDNLIMIWDTANEILM 787
Query: 426 RSLEGHLDKVMSIDI 440
+ + H + +++I
Sbjct: 788 QFFDHHKASINTMEI 802
Score = 60.5 bits (145), Expect = 5e-09
Identities = 64/281 (22%), Positives = 120/281 (41%), Gaps = 28/281 (9%)
Query: 162 LESKLKQFSLKGMQVIDEKPISEINTSPGGDLMACGSWSGNLSLVDNSLS---KIYCNRS 218
+ SK+ FSLK +++ K + G ++ VD + K + R+
Sbjct: 573 VSSKVYVFSLKPSKLVQVKAAQWLKNLDTG-----------MAGVDKDMIDPIKKFTRRT 621
Query: 219 LSGTK--ISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNS 276
L G + + G ++ + + + C+ D + ++ + V I + A V P
Sbjct: 622 LYGHQGPVYGCSFNPEDRFLITCSEDFSVRLWCLLSWSCVVIFSGHLAPVCFVVFAPRGY 681
Query: 277 FIGSTSFDKT---WILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWD 333
+ + S D T W+ D K A IL +GH AE+ FH + ++T D IWD
Sbjct: 682 YFATASDDCTARVWMQ-DNTKPARIL--QGHLAELGVCLFHPNRHYMATGSADCTVRIWD 738
Query: 334 IRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVS 393
I + +GH I ++ +S G L SG D I +WD + ++ H + ++
Sbjct: 739 IVKAVQVRIFRGHKSRITALIYSICGRYLVSGGDDNLIMIWDTANEILMQFFDHHKASIN 798
Query: 394 QVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDK 434
++ + N LV G D ++ + W E+ ++ +L++
Sbjct: 799 TMEISLDN-NILVVGGQDCQLTL-----WDFEQVIKNYLNR 833
>At5g25150 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 700
Score = 70.1 bits (170), Expect = 7e-12
Identities = 44/163 (26%), Positives = 78/163 (46%), Gaps = 17/163 (10%)
Query: 263 DARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVST 322
DA+F+ P + S S D+T + + P+ I GH ++V +H + + ++T
Sbjct: 465 DAQFS-----PFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDV---DWHPNCNYIAT 516
Query: 323 AGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNV 382
D +WD+++G+ + GH + S+ S +G +ASG DGTI +WD+ +
Sbjct: 517 GSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCI 576
Query: 383 ETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKE 425
++ HNS V + Y V GYD + + +W+ E
Sbjct: 577 TPLMGHNSCVWSL-------SYRVVQGYD--IEWYGFLSWVVE 610
Score = 64.3 bits (155), Expect = 4e-10
Identities = 46/178 (25%), Positives = 78/178 (42%), Gaps = 4/178 (2%)
Query: 273 PCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIW 332
P F+ S+S D T L T A ++ +GH+ V+ F G ++ D A IW
Sbjct: 428 PPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIW 487
Query: 333 DIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIV 392
+ + + + GH + VDW N +A+GS D T+++WD++ V + H S+V
Sbjct: 488 SMDRIQPLRIMAGH---LSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMV 544
Query: 393 SQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIYSAGW 450
+ + +G Y+ S D + +++ L GH V S+ Y W
Sbjct: 545 LSLAMS-PDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYRVVQGYDIEW 601
Score = 62.4 bits (150), Expect = 1e-09
Identities = 38/149 (25%), Positives = 66/149 (43%), Gaps = 4/149 (2%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GHS V+S +F G V ++ D +W + N++ +GH+ P++ +S G+
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYF 475
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNW 422
AS S D T ++W + + + + H S V N Y+ + DK V +++
Sbjct: 476 ASCSHDRTARIWSMDRIQPLRIMAGHLSDVDW----HPNCNYIATGSSDKTVRLWDVQTG 531
Query: 423 IKERSLEGHLDKVMSIDIVGPDIYSAGWD 451
R GH V+S+ + Y A D
Sbjct: 532 ECVRIFIGHRSMVLSLAMSPDGRYMASGD 560
Score = 52.8 bits (125), Expect = 1e-06
Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 25/148 (16%)
Query: 312 SFHNDGSLVSTAGLDAIALIWDI----RSGKNIMS--------------------LQGHS 347
S +DGSLV+ D+ +WD+ ++G + L GHS
Sbjct: 359 SISHDGSLVAGGFSDSSIKVWDMAKIGQAGSGALQAENDSSDQSIGPNGRRSYTLLLGHS 418
Query: 348 KPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVS 407
P+YS +S G + S S D TI++W + N+ HN V +F+ G Y S
Sbjct: 419 GPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFS-PFGHYFAS 477
Query: 408 SGYDKKVNIFNDGNWIKERSLEGHLDKV 435
+D+ I++ R + GHL V
Sbjct: 478 CSHDRTARIWSMDRIQPLRIMAGHLSDV 505
>YLR222c [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 817
Score = 69.3 bits (168), Expect = 1e-11
Identities = 43/160 (26%), Positives = 82/160 (50%), Gaps = 5/160 (3%)
Query: 301 QEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGY 360
+ H ++ +LS + S+ +TA D IW++ +G+ +L H + ++ V + Q
Sbjct: 487 RHAHEKDINALSVSPNDSIFATASYDKTCKIWNLENGELEATLANHKRGLWDVSFCQYDK 546
Query: 361 QLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKF-NKQNGGYLVSSGYDKKVNIFND 419
LA+ SGD T+K+W + ++T+ H + V + F NKQ L+S G D + I++
Sbjct: 547 LLATSSGDKTVKIWSLDTFSVMKTLEGHTNAVQRCSFINKQK--QLISCGADGLIKIWDC 604
Query: 420 GNWIKERSLEGHLDKVMSIDIV--GPDIYSAGWDRSVNKW 457
+ ++L+GH +++ ++ + G I SA D W
Sbjct: 605 SSGECLKTLDGHNNRLWALSTMNDGDMIVSADADGVFQFW 644
Score = 50.4 bits (119), Expect = 5e-06
Identities = 34/123 (27%), Positives = 61/123 (48%), Gaps = 9/123 (7%)
Query: 305 SAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDW----SQNGY 360
S+ + L + +L++ G D ++ DI +G S +GH I S+ + + +
Sbjct: 102 SSPSYILDADSTSTLLAVGGTDGSIIVVDIENGYITHSFKGHGGTISSLKFYGQLNSKIW 161
Query: 361 QLASGSGDGTIKVWDIRKKGNVETILAHNSIVS-----QVKFNKQNGGYLVSSGYDKKVN 415
LASG +G +KVWD+ K+ + T+ H S V +V N + L+S G D +N
Sbjct: 162 LLASGDTNGMVKVWDLVKRKCLHTLQEHTSAVRGLDIIEVPDNDEPSLNLLSGGRDDIIN 221
Query: 416 IFN 418
+++
Sbjct: 222 LWD 224
>At1g29260 [U] KOG0277 Peroxisomal targeting signal type 2 receptor
Length = 317
Score = 69.3 bits (168), Expect = 1e-11
Identities = 64/245 (26%), Positives = 112/245 (45%), Gaps = 20/245 (8%)
Query: 229 WSVDSKNIFVCT-HDGRIVIYDSG---DETTVKILYKNDARFAQVRCHPC--NSFIGSTS 282
WS ++ + DG + IYD+ ++ ++ V +P +SF+ S S
Sbjct: 68 WSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSFLTS-S 126
Query: 283 FDKTWILIDTVKQAPILIQEGHSAEVFSLSFH-NDGSLVSTAGLDAIALIWDIRSGKNIM 341
+D T L + A + + H+ V+ ++ G + ++A D IWD+R + M
Sbjct: 127 WDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTM 186
Query: 342 SLQGHSKPIYSVDWSQ-NGYQLASGSGDGTIKVWDIRK-KGNVETILAHNSIVSQVKFNK 399
+ H I S DW++ + LA+ S D T+KVWD+R + + + H V +VKF+
Sbjct: 187 IIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSP 246
Query: 400 QNGGYLVSSGYDKKVNIFNDGNWIKERSLEG----HLDKVMSID---IVGPDIYSAGWDR 452
+ S YD V ++ +++ E +L G H + + ID +V + S GWD
Sbjct: 247 HRRSLIASCSYDMSVCLW---DYMVEDALVGRYDHHTEFAVGIDMSVLVEGLMASTGWDE 303
Query: 453 SVNKW 457
V W
Sbjct: 304 LVYVW 308
>7297305 [T] KOG0279 G protein beta subunit-like protein
Length = 318
Score = 69.3 bits (168), Expect = 1e-11
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 14/190 (7%)
Query: 280 STSFDKTWILI------DTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWD 333
S S DKT I+ DT P GHS + + +DG+ + D +WD
Sbjct: 33 SASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSDGNYALSGSWDQTLRLWD 92
Query: 334 IRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETIL--AHNSI 391
+ +GK +GH+K + SV +S + Q+ SGS D TIK+W+ + TI H
Sbjct: 93 LAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAECKF-TIQEDGHTDW 151
Query: 392 VSQVKFNKQNGG-YLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPD---IYS 447
VS V+F+ + +VS G+D+ V ++N N + + GH + ++ V PD S
Sbjct: 152 VSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGH-NGYLNTVTVSPDGSLCTS 210
Query: 448 AGWDRSVNKW 457
G D W
Sbjct: 211 GGKDSKALLW 220
Score = 68.9 bits (167), Expect = 1e-11
Identities = 56/209 (26%), Positives = 97/209 (45%), Gaps = 9/209 (4%)
Query: 182 ISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTH 241
IS++ S G+ GSW L L D + K + + +S D++ I +
Sbjct: 67 ISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSR 126
Query: 242 DGRIVIYDSGDETTVKILYKNDARFAQVRC-----HPCNSFIGSTSFDKTWILIDTVKQA 296
D I ++++ E K + D V C + N I S +D+T + +
Sbjct: 127 DKTIKLWNTLAEC--KFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCK 184
Query: 297 PILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWS 356
GH+ + +++ DGSL ++ G D+ AL+WD+ GKN+ +L+ H+ I ++ +S
Sbjct: 185 LKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE-HNDIINALCFS 243
Query: 357 QNGYQLASGSGDGTIKVWDIRKKGNVETI 385
N Y L G +IK+WD+ K VE +
Sbjct: 244 PNRYWLCVAYGP-SIKIWDLACKKTVEEL 271
>7296695 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 439
Score = 69.3 bits (168), Expect = 1e-11
Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 4/243 (1%)
Query: 181 PISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCT 240
PI + +P G + G+ SG +L + + + WS + +
Sbjct: 148 PIFTLAWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDISVRTMVWSHNDSWMVTGD 207
Query: 241 HDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILI 300
H G + + S + VK+ + + P +S S S D T + D ++ +
Sbjct: 208 HGGYVKYWQS-NMNNVKMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERV 266
Query: 301 QEGHSAEVFSLSFHNDGSLVSTAGLD--AIALIWDIRSGKNIMSLQGHSKPIYSVDWSQN 358
GH A+V + +H ++ + D IWD +SG + +L H + + W+ N
Sbjct: 267 LRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLKWNDN 326
Query: 359 GYQLASGSGDGTIKVWDIRK-KGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIF 417
G L + S D +K++DIR + V+ H S V ++ + G S G D + +
Sbjct: 327 GNWLVTASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFW 386
Query: 418 NDG 420
N G
Sbjct: 387 NVG 389
Score = 56.6 bits (135), Expect = 8e-08
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 23/219 (10%)
Query: 224 ISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSF 283
I G+ +S + DG + I+D ++L + A V HP I S S
Sbjct: 232 IRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERVLRGHGADVKCVHWHPQKGMIVSGSK 291
Query: 284 D-----KTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRS-G 337
D K W D + H + V L ++++G+ + TA D + ++DIR+
Sbjct: 292 DNQQPIKIW---DPKSGIALATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLFDIRNLR 348
Query: 338 KNIMSLQGHSKPIYSVDWSQNGYQL-ASGSGDGTIKVWDI-----RKKGNVETILAHNSI 391
+ + +GH K SV W L SG DG+I W++ ++ G VET AH+SI
Sbjct: 349 EEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGRSTDKEIGCVET--AHDSI 406
Query: 392 VSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEG 430
V + ++ G+++ SG + F W + R +G
Sbjct: 407 VWTLAWHPL--GHILCSGSNDHTIKF----WTRNRPGDG 439
Score = 49.7 bits (117), Expect = 9e-06
Identities = 33/141 (23%), Positives = 61/141 (42%), Gaps = 4/141 (2%)
Query: 300 IQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNG 359
I + H V ++ + ++ S + T W N+ Q H + I + +S
Sbjct: 183 ILQAHDISVRTMVWSHNDSWMVTGDHGGYVKYWQSNMN-NVKMYQAHKEAIRGISFSPTD 241
Query: 360 YQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKK--VNIF 417
+ SGS DGT+++WD + + H + V V ++ Q G +VS D + + I+
Sbjct: 242 SKFVSGSDDGTLRIWDFMRCQEERVLRGHGADVKCVHWHPQK-GMIVSGSKDNQQPIKIW 300
Query: 418 NDGNWIKERSLEGHLDKVMSI 438
+ + I +L H VM +
Sbjct: 301 DPKSGIALATLHAHKSTVMDL 321
>ECU11g1750 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 556
Score = 68.9 bits (167), Expect = 1e-11
Identities = 44/159 (27%), Positives = 72/159 (44%), Gaps = 3/159 (1%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GHS V+ L F + + ++ D +W + + + H+ P++ VD + N Y
Sbjct: 320 GHSGPVYGLKFFSSNKFLVSSSQDCTVCLWSLDLLCLLAVYKAHAFPVWCVDVAPNDYFF 379
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNW 422
ASG+GD VW + I++ S V+ VKF+ N YL + D +V + +
Sbjct: 380 ASGAGDRQAIVWSVMTSKPERLIISSLSDVTAVKFH-PNSSYLFTGSSDHRVRMHDISTA 438
Query: 423 IKERSLEGHLDKVMSIDI--VGPDIYSAGWDRSVNKWGV 459
R GH D V +D+ G + S DR+V W +
Sbjct: 439 SVVRIFCGHTDTVTCMDVSHCGKFLASGSKDRTVLLWDI 477
Score = 60.8 bits (146), Expect = 4e-09
Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 2/162 (1%)
Query: 242 DGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQ 301
D + +++ +++ + + V+ HP +S++ + S D + D + + I
Sbjct: 385 DRQAIVWSVMTSKPERLIISSLSDVTAVKFHPNSSYLFTGSSDHRVRMHDISTASVVRIF 444
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
GH+ V + + G +++ D L+WDI+S K + GH ++SV + G
Sbjct: 445 CGHTDTVTCMDVSHCGKFLASGSKDRTVLLWDIQSSKLLGKYVGHENTVFSVSFCFYGSV 504
Query: 362 LASGSGDGTIKVWD--IRKKGNVETILAHNSIVSQVKFNKQN 401
LAS D ++++WD K G + T N+ + VKF +N
Sbjct: 505 LASCGADNSVRLWDRTDHKGGCLGTYYTKNTPLLCVKFGYRN 546
Score = 55.8 bits (133), Expect = 1e-07
Identities = 63/256 (24%), Positives = 105/256 (40%), Gaps = 34/256 (13%)
Query: 193 LMACG---SWSGNLSLVDNSLSKIYCNRSLSGTKIS------------------------ 225
LMACG S+ SL + SL K+ + L+ + I
Sbjct: 267 LMACGFKDSYVEVYSLTNESLKKLKSSSELAKSDIKTLNEEKFEEVGSSYKLVGHSGPVY 326
Query: 226 GLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRC---HPCNSFIGSTS 282
GL + +K + + D + ++ S D + +YK A V C P + F S +
Sbjct: 327 GLKFFSSNKFLVSSSQDCTVCLW-SLDLLCLLAVYK--AHAFPVWCVDVAPNDYFFASGA 383
Query: 283 FDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMS 342
D+ I+ + P + ++V ++ FH + S + T D + DI + +
Sbjct: 384 GDRQAIVWSVMTSKPERLIISSLSDVTAVKFHPNSSYLFTGSSDHRVRMHDISTASVVRI 443
Query: 343 LQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNG 402
GH+ + +D S G LASGS D T+ +WDI+ + + H + V V F G
Sbjct: 444 FCGHTDTVTCMDVSHCGKFLASGSKDRTVLLWDIQSSKLLGKYVGHENTVFSVSFCFY-G 502
Query: 403 GYLVSSGYDKKVNIFN 418
L S G D V +++
Sbjct: 503 SVLASCGADNSVRLWD 518
>At5g16750 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 876
Score = 68.9 bits (167), Expect = 1e-11
Identities = 70/262 (26%), Positives = 120/262 (45%), Gaps = 21/262 (8%)
Query: 215 CNRSLSGTK--ISGLDWSVDSK-NIFVCT--HDGRIVIYDSGDETTVKI-LYKNDARFAQ 268
C+ L+G K + LD V S N+ + T D + ++++ ++ + + N A
Sbjct: 393 CSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAV 452
Query: 269 VRCHPCNSFIGSTSFDKT---WIL--IDTVKQAPILIQE-----GHSAEVFSLSFHNDGS 318
SF S S D+T W L I + PI ++ H ++ S++ + S
Sbjct: 453 AFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDS 512
Query: 319 LVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRK 378
LV T D A IW + ++++L+GH + I+SV++S + + SGD T+K+W I
Sbjct: 513 LVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISD 572
Query: 379 KGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSI 438
++T H S V + F +G VS G D + ++N + + H DKV ++
Sbjct: 573 GSCLKTFEGHTSSVLRASF-ITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWAL 631
Query: 439 DIVGPD---IYSAGWDRSVNKW 457
VG I + G D +N W
Sbjct: 632 -AVGKKTEMIATGGGDAVINLW 652
Score = 67.4 bits (163), Expect = 4e-11
Identities = 59/237 (24%), Positives = 100/237 (41%), Gaps = 50/237 (21%)
Query: 188 SPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVI 247
S G +AC +++VD++ S + ++ L S D K +F H +I +
Sbjct: 28 SSDGSFIACAC-GDVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRV 86
Query: 248 YDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAE 307
+D T+K + ++W +GH
Sbjct: 87 WDL---ETLKCI-------------------------RSW--------------KGHEGP 104
Query: 308 VFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDW--SQNGYQLASG 365
V ++ H G L++TAG D L+WD+ G +GH + S+ + N L SG
Sbjct: 105 VMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISG 164
Query: 366 SGDGTIKVWDIRKKGNVETILA----HNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN 418
S D T++VWD+ K + LA H S V+ + + ++G L S+G DK VN+++
Sbjct: 165 SDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALS-EDGLTLFSAGRDKVVNLWD 220
Score = 65.5 bits (158), Expect = 2e-10
Identities = 49/176 (27%), Positives = 80/176 (44%), Gaps = 7/176 (3%)
Query: 289 LIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSK 348
++D+ + EG S + +L+ D L+ +AG +WD+ + K I S +GH
Sbjct: 44 IVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEG 103
Query: 349 PIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFN-KQNGGYLVS 407
P+ + +G LA+ D + VWD+ H +VS + F+ N L+S
Sbjct: 104 PVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILIS 163
Query: 408 SGYDKKVNIF--NDGNWIKE--RSLEGHLDKVMSIDIV--GPDIYSAGWDRSVNKW 457
D V ++ N N K+ +E H V SI + G ++SAG D+ VN W
Sbjct: 164 GSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLW 219
>7303631 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 680
Score = 68.9 bits (167), Expect = 1e-11
Identities = 41/157 (26%), Positives = 81/157 (51%), Gaps = 3/157 (1%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
G ++SL+ + G+++ + + I IWD R+ M L+GH++ + + S +G Q+
Sbjct: 164 GSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRRMKLRGHTENVRCLVVSPDGNQV 223
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNW 422
SGS DGTIKVW++ ++ V+TI H V + + +N Y++S D+ + + N
Sbjct: 224 VSGSSDGTIKVWNLGQQRCVQTIHVHKEGVWSLLMS-ENFQYIISGSRDRNIIVTEMRNP 282
Query: 423 IKERSLEGHLDKVMSI--DIVGPDIYSAGWDRSVNKW 457
+ + V+S+ +I +++ W+ + W
Sbjct: 283 SNKTLVCEEQAPVLSLGYNIDKTGVWATTWNSDIRCW 319
Score = 56.2 bits (134), Expect = 1e-07
Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 14/136 (10%)
Query: 315 NDGSLVSTAGLDAIALIWDIR---SGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTI 371
N+G L S AG DAI +W+ R S K I S++ H+ + + NG L S S D T+
Sbjct: 39 NNGKLYS-AGRDAIIRVWNTRTDSSEKYIQSMEHHNDWVNDIVLCCNGRNLISASCDTTV 97
Query: 372 KVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN---------DGNW 422
KVW+ +K + T+ H V + + K + S+G DK + +++ N
Sbjct: 98 KVWNAQKGFCMSTLRTHRDYVQALAYAKDR-EQVASAGLDKAIFLWDVNTLTALTASNNT 156
Query: 423 IKERSLEGHLDKVMSI 438
+ SL G D + S+
Sbjct: 157 VTTSSLTGSKDSIYSL 172
>CE17294 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 473
Score = 68.6 bits (166), Expect = 2e-11
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH V + F D +++A D +W R+GK + SL+GH P+Y V WS + L
Sbjct: 358 GHMQLVNQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAWSADSRLL 417
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIF 417
SGS D T+KV++++ K + H V V ++ + G +VS G DK + ++
Sbjct: 418 VSGSADSTLKVFELKTKSLYYDLPGHGDEVFTVDWSPE-GTKVVSGGKDKVLKLW 471
Score = 57.4 bits (137), Expect = 4e-08
Identities = 49/211 (23%), Positives = 83/211 (39%), Gaps = 29/211 (13%)
Query: 253 ETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLS 312
ETT+K++Y+ A F C++ I GH V S
Sbjct: 76 ETTLKLVYQPQAVFRVRPVTRCSASI-----------------------PGHGEPVISAQ 112
Query: 313 FHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIK 372
F DG +++ D IWDI + + + H + + WS + ++AS +G I
Sbjct: 113 FSPDGRGLASGSGDQTMRIWDIELELPLHTCKSHKSWVLCIAWSPDATKIASACKNGEIC 172
Query: 373 VWDIRKKGNV-ETILAHNSIVSQVKFNKQNGG----YLVSSGYDKKVNIFNDGNWIKERS 427
+W+ + + +T+ H ++ + + + L S G D + I++ R
Sbjct: 173 IWNAKTGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIWDTVQGTVVRC 232
Query: 428 LEGHLDKVMSIDIVGPD-IYSAGWDRSVNKW 457
L GH V + G IYS DR+V W
Sbjct: 233 LSGHTASVTCLRWGGEGLIYSGSQDRTVKMW 263
Score = 50.8 bits (120), Expect = 4e-06
Identities = 69/282 (24%), Positives = 115/282 (40%), Gaps = 37/282 (13%)
Query: 193 LMACGSWSGNLSLVDNSLSKIYCNRSLSG--TKISGLDWSVDSKNIFVCTHDGRIVIYDS 250
L +CG GN+ + D + R LSG ++ L W G +IY
Sbjct: 210 LASCGK-DGNIFIWDTVQGTVV--RCLSGHTASVTCLRWG------------GEGLIYSG 254
Query: 251 GDETTVKILYKNDA---RFAQVRCHPCNSFIGSTSF---------DKTWILIDTVKQAPI 298
+ TVK+ +D R H N+ +T + K I DTV++
Sbjct: 255 SQDRTVKMWRADDGVMCRNMTGHAHWINTLALNTDYALRTSCFEPSKRCIKPDTVEECQK 314
Query: 299 LIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGK-NIMSLQGHSKPIYSVDWSQ 357
+ Q + A +L LVS + D +W+ + K +I + GH + + V +S
Sbjct: 315 VAQTRYEA---ALEIAGGERLVSGSD-DFTLFMWNPKETKQSINRMTGHMQLVNQVVFSP 370
Query: 358 NGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIF 417
+ +AS S D ++K+W R + ++ H V QV ++ + LVS D + +F
Sbjct: 371 DTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAWS-ADSRLLVSGSADSTLKVF 429
Query: 418 NDGNWIKERSLEGHLDKVMSID--IVGPDIYSAGWDRSVNKW 457
L GH D+V ++D G + S G D+ + W
Sbjct: 430 ELKTKSLYYDLPGHGDEVFTVDWSPEGTKVVSGGKDKVLKLW 471
>At5g52820 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 473
Score = 68.6 bits (166), Expect = 2e-11
Identities = 33/102 (32%), Positives = 56/102 (54%)
Query: 273 PCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIW 332
P +I S SFDK+ L + + + + GH V+ +S+ D L+ + D+ IW
Sbjct: 370 PDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIW 429
Query: 333 DIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVW 374
+IR+ K L GH+ +++VDWS +G ++ SG D +K+W
Sbjct: 430 EIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 68.6 bits (166), Expect = 2e-11
Identities = 43/139 (30%), Positives = 71/139 (50%), Gaps = 2/139 (1%)
Query: 280 STSFDKTWILID-TVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGK 338
S S D T L + +V + P GH V + F DG +++A D +W+ +G+
Sbjct: 334 SGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQ 393
Query: 339 NIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFN 398
+ +GH P+Y V WS + L SGS D T+K+W+IR K + + H V V ++
Sbjct: 394 FVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWS 453
Query: 399 KQNGGYLVSSGYDKKVNIF 417
+G +VS G D+ + ++
Sbjct: 454 -PDGEKVVSGGKDRVLKLW 471
Score = 54.7 bits (130), Expect = 3e-07
Identities = 44/166 (26%), Positives = 75/166 (44%), Gaps = 16/166 (9%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH+ V +SF DG +++ D +WD+ + + + +GH + +V WS +G L
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHL 166
Query: 363 ASGSGDGTIKVWDIRKKGNVE--TILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDG 420
SGS G I W+ KKG +E + H ++ + + + +SS + V DG
Sbjct: 167 VSGSKSGEICCWN-PKKGELEGSPLTGHKKWITGISWEPVH----LSSPCRRFVTSSKDG 221
Query: 421 N---W---IKER--SLEGHLDKVMSIDIVGPD-IYSAGWDRSVNKW 457
+ W +K+ L GH V + G IY+ D ++ W
Sbjct: 222 DARIWDITLKKSIICLSGHTLAVTCVKWGGDGIIYTGSQDCTIKMW 267
Score = 50.8 bits (120), Expect = 4e-06
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 8/165 (4%)
Query: 273 PCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIW 332
P + S S D T L D + P+ +GH V ++++ DG + + W
Sbjct: 119 PDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCW 178
Query: 333 DIRSGKNIMS-LQGHSKPIYSVDW-----SQNGYQLASGSGDGTIKVWDIRKKGNVETIL 386
+ + G+ S L GH K I + W S + + S DG ++WDI K ++ +
Sbjct: 179 NPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLS 238
Query: 387 AHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGH 431
H V+ VK+ G + + D + ++ R L+GH
Sbjct: 239 GHTLAVTCVKWG--GDGIIYTGSQDCTIKMWETTQGKLIRELKGH 281
>SPBC713.04c [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 854
Score = 68.2 bits (165), Expect = 2e-11
Identities = 61/272 (22%), Positives = 119/272 (43%), Gaps = 4/272 (1%)
Query: 165 KLKQFSLKGMQVIDEKPISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSG-TK 223
+L F++ I + I + + GD +A GS LV S+ Y + S
Sbjct: 282 ELPSFTMLYQLSITQSNIDTLTVNSTGDWIAIGSSKLGQLLVWEWQSESYVLKQQSHYDA 341
Query: 224 ISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSF 283
+S L +S D + I DG+I ++D + ++ + + + + + S+S
Sbjct: 342 LSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSL 401
Query: 284 DKTWILIDTVKQAPILIQEGHSAEVFS-LSFHNDGSLVSTAGLDAIAL-IWDIRSGKNIM 341
D + D ++ S FS ++ G +V D+ + +W +++G+ +
Sbjct: 402 DGSVRAWDLIRYRNFRTFTAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFMWSVQTGQLLE 461
Query: 342 SLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQN 401
+L GH P+ S+ ++ +G LASGS D T+++WDI + + L S V + F+
Sbjct: 462 TLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIWDIFSRSGIVEPLPIPSDVLSLAFHPDG 521
Query: 402 GGYLVSSGYDKKVNIFNDGNWIKERSLEGHLD 433
V+S D ++ +N + ++G D
Sbjct: 522 KEVCVAS-LDGQLTFWNVQEGKQTSLIDGRKD 552
Score = 64.7 bits (156), Expect = 3e-10
Identities = 50/193 (25%), Positives = 87/193 (44%), Gaps = 26/193 (13%)
Query: 287 WILIDTVKQAPILI-----------QEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIR 335
WI I + K +L+ Q+ H + +L + +DG + T D +WD+
Sbjct: 310 WIAIGSSKLGQLLVWEWQSESYVLKQQSHYDALSTLQYSSDGQRIITGADDGKIKVWDMN 369
Query: 336 SGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQV 395
SG I++ H+ + + +S+ G L S S DG+++ WD+ + N T A S+V
Sbjct: 370 SGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYRNFRTFTA----PSRV 425
Query: 396 KFN---KQNGGYLVSSGYDKKVNIF----NDGNWIKERSLEGHLDKV--MSIDIVGPDIY 446
+F+ G +V +G IF G ++ +L GH V +S + G +
Sbjct: 426 QFSCIAVDPSGEIVCAGSQDSFEIFMWSVQTGQLLE--TLAGHEGPVSSLSFNSSGSLLA 483
Query: 447 SAGWDRSVNKWGV 459
S WD++V W +
Sbjct: 484 SGSWDKTVRIWDI 496
>SPAC18B11.10 [R] KOG0266 WD40 repeat-containing protein
Length = 614
Score = 68.2 bits (165), Expect = 2e-11
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 7/153 (4%)
Query: 308 VFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSG 367
V +++F DG + T D +WD+ + K GH + IYS+D+S NG + SGSG
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSG 422
Query: 368 DGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERS 427
D T ++WD+ + + N + + N ++ D+ + +++ + ER
Sbjct: 423 DRTARLWDVETGQCILKLEIENGVTAIA--ISPNDQFIAVGSLDQIIRVWSVSGTLVER- 479
Query: 428 LEGHLDKVMSIDIVGPD---IYSAGWDRSVNKW 457
LEGH + V SI PD + S D+++ W
Sbjct: 480 LEGHKESVYSI-AFSPDSSILLSGSLDKTIKVW 511
Score = 63.9 bits (154), Expect = 5e-10
Identities = 59/251 (23%), Positives = 104/251 (40%), Gaps = 36/251 (14%)
Query: 182 ISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTH 241
+ I SP G + G+ + L D S K+ S I LD+S H
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFS----------H 412
Query: 242 DGRIVIYDSGDETT-----------VKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILI 290
+GR ++ SGD T +K+ +N + P + FI S D+ I +
Sbjct: 413 NGRFIVSGSGDRTARLWDVETGQCILKLEIENGV--TAIAISPNDQFIAVGSLDQI-IRV 469
Query: 291 DTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNI---------- 340
+V + EGH V+S++F D S++ + LD +W++++ +++
Sbjct: 470 WSVSGTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGI 529
Query: 341 --MSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFN 398
+ GH+ + SV S + SGS D +++ WD++ + T H + V V F+
Sbjct: 530 CKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFS 589
Query: 399 KQNGGYLVSSG 409
+ SG
Sbjct: 590 PDGRQFASGSG 600
Score = 57.4 bits (137), Expect = 4e-08
Identities = 52/222 (23%), Positives = 96/222 (42%), Gaps = 15/222 (6%)
Query: 229 WSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWI 288
+S D K + T D +I ++D + + ++ + FI S S D+T
Sbjct: 368 FSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTAR 427
Query: 289 LIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSK 348
L D IL E + V +++ + ++ LD I +W + SG + L+GH +
Sbjct: 428 LWDVETGQCILKLEIENG-VTAIAISPNDQFIAVGSLDQIIRVWSV-SGTLVERLEGHKE 485
Query: 349 PIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNV------------ETILAHNSIVSQVK 396
+YS+ +S + L SGS D TIKVW+++ +V T H V V
Sbjct: 486 SVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVA 545
Query: 397 FNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSI 438
+ + + +S D+ + ++ + +GH + V+S+
Sbjct: 546 VS-PDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISV 586
>SPAC144.13c [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 556
Score = 68.2 bits (165), Expect = 2e-11
Identities = 61/244 (25%), Positives = 118/244 (48%), Gaps = 16/244 (6%)
Query: 224 ISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSF 283
++ L W ++ V TH+G + I+D+ T K +V N + S+
Sbjct: 294 VTSLRWVQRGTHLAVGTHNGSVEIWDAA---TCKKTRTMSGHTERVGALSWNDHVLSSGG 350
Query: 284 DKTWILIDTVKQAP---ILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNI 340
IL V+ AP + H EV L ++++ +L+++ G D ++WD K +
Sbjct: 351 RDNHILHRDVR-APEHYFRVLTAHRQEVCGLEWNSNENLLASGGNDNALMVWDKFEEKPL 409
Query: 341 MSLQGHSKPIYSVDWS--QNGYQLASGSG--DGTIKVWDIRKKGNVETILAHNSIVSQVK 396
S H + ++ WS Q G LASG G D TIK+W+ ++G++ + S V +
Sbjct: 410 YSFHNHIAAVKAITWSPHQRGI-LASGGGTADRTIKLWN-TQRGSMLHNIDTGSQVCNLL 467
Query: 397 FNKQNGGYLVSSGY-DKKVNIFNDGNWIKERSLEGHLDKVMSIDIV--GPDIYSAGWDRS 453
++KQ ++ + G+ + +V ++N + + +L+GH D+V+ + + G +I + D +
Sbjct: 468 WSKQTNEFISTHGFMENEVALWNYPSVSRVGTLKGHTDRVLYLAMSPNGENIVTGAADET 527
Query: 454 VNKW 457
+ W
Sbjct: 528 LRFW 531
>Hs4505731 [U] KOG0277 Peroxisomal targeting signal type 2 receptor
Length = 323
Score = 68.2 bits (165), Expect = 2e-11
Identities = 53/201 (26%), Positives = 95/201 (46%), Gaps = 15/201 (7%)
Query: 229 WSVDSKNIFV-CTHDGRIVIYDSGDETTVKILYKNDAR------FAQVRCHPCNSFIGST 281
WS +++++ + C+ DG + ++D+ +YK A+ ++Q R + S
Sbjct: 75 WSENNEHVLITCSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSVDWSQTRGE---QLVVSG 131
Query: 282 SFDKTWILIDTVKQAPILIQEGHSAEVFSL--SFHNDGSLVSTAGLDAIALIWDIRSGKN 339
S+D+T L D + GH + ++S S H G S +G D IWD+++
Sbjct: 132 SWDQTVKLWDPTVGKSLCTFRGHESIIYSTIWSPHIPGCFASASG-DQTLRIWDVKAAGV 190
Query: 340 IMSLQGHSKPIYSVDWSQ-NGYQLASGSGDGTIKVWDIRK-KGNVETILAHNSIVSQVKF 397
+ + H I S DW + N L +G+ D +++ WD+R + V +L H + +VKF
Sbjct: 191 RIVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKF 250
Query: 398 NKQNGGYLVSSGYDKKVNIFN 418
+ + L S YD V +N
Sbjct: 251 SPFHASVLASCSYDFTVRFWN 271
Score = 66.2 bits (160), Expect = 9e-11
Identities = 51/176 (28%), Positives = 82/176 (45%), Gaps = 8/176 (4%)
Query: 243 GRIVIYDSGDETTVKILYK---NDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQA-PI 298
G ++I D DE +++ ND F + + S D + L DT K A P+
Sbjct: 46 GTLLILDP-DEAGLRLFRSFDWNDGLFDVTWSENNEHVLITCSGDGSLQLWDTAKAAGPL 104
Query: 299 LIQEGHSAEVFSLSFHNDGS--LVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWS 356
+ + H+ EV+S+ + LV + D +WD GK++ + +GH IYS WS
Sbjct: 105 QVYKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHESIIYSTIWS 164
Query: 357 QN-GYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYD 411
+ AS SGD T+++WD++ G I AH + + + K N LV+ D
Sbjct: 165 PHIPGCFASASGDQTLRIWDVKAAGVRIVIPAHQAEILSCDWCKYNENLLVTGAVD 220
>CE28600 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 665
Score = 68.2 bits (165), Expect = 2e-11
Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 21/255 (8%)
Query: 215 CNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPC 274
C+R LSG S L D++ I + D + ++D +K L + +R
Sbjct: 254 CSRILSGHTGSVLCLQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRF--A 311
Query: 275 NSFIGSTSFDKTWILIDTVKQAPILIQE---GHSAEVFSLSFHNDGSLVSTAGLDAIALI 331
N + + S D++ + D V I I+ GH A V + F +D +VS +G D +
Sbjct: 312 NGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDF-DDRYIVSASG-DRTIKV 369
Query: 332 WDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSI 391
W + + + + +L GH + I + + G + SGS D TI++WDI + + H +
Sbjct: 370 WSMDTLEFVRTLAGHRRGIACLQY--RGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEEL 427
Query: 392 VSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEG---------HLDKVMSIDIVG 442
V ++F+++ +VS YD K+ +++ + R+L H +V +
Sbjct: 428 VRCIRFDEKR---IVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFDD 484
Query: 443 PDIYSAGWDRSVNKW 457
I S+ D ++ W
Sbjct: 485 FQIVSSSHDDTILIW 499
Score = 59.3 bits (142), Expect = 1e-08
Identities = 62/230 (26%), Positives = 92/230 (39%), Gaps = 14/230 (6%)
Query: 232 DSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPC-NSFIGSTSFDKTWILI 290
D I D I I+D D + +IL V C N I S S D T +
Sbjct: 231 DDDKIVSGLRDNTIKIWDRKDYSCSRIL---SGHTGSVLCLQYDNRVIISGSSDATVRVW 287
Query: 291 DTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMS---LQGHS 347
D I H V L F N ++ T D +WD+ S ++I L GH
Sbjct: 288 DVETGECIKTLIHHCEAVLHLRFAN--GIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHR 345
Query: 348 KPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVS 407
+ VD+ + S SGD TIKVW + V T+ H ++ +++ G +VS
Sbjct: 346 AAVNVVDFDDR--YIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYR---GRLVVS 400
Query: 408 SGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRSVNKW 457
D + +++ + + R LEGH + V I I S +D + W
Sbjct: 401 GSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKRIVSGAYDGKIKVW 450
Score = 57.0 bits (136), Expect = 6e-08
Identities = 38/163 (23%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 300 IQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNG 359
I GH+ V L + D ++ + DA +WD+ +G+ I +L H + + + ++ NG
Sbjct: 257 ILSGHTGSVLCLQY--DNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA-NG 313
Query: 360 YQLASGSGDGTIKVWDIRKKGNV---ETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNI 416
+ S D +I VWD+ ++ ++ H + V+ V F+ + Y+VS+ D+ + +
Sbjct: 314 IMVTC-SKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDR---YIVSASGDRTIKV 369
Query: 417 FNDGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRSVNKWGV 459
++ R+L GH + + G + S D ++ W +
Sbjct: 370 WSMDTLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDI 412
Score = 54.3 bits (129), Expect = 4e-07
Identities = 45/170 (26%), Positives = 77/170 (44%), Gaps = 12/170 (7%)
Query: 294 KQAPILIQEGHSAEVFSLSFHNDGSLVSTAGL-DAIALIWDIRSGKNIMSLQGHSKPIYS 352
K I Q +S V+ L + +D +VS GL D IWD + L GH+ +
Sbjct: 211 KMTRINCQSENSKGVYCLQYDDD-KIVS--GLRDNTIKIWDRKDYSCSRILSGHTGSVLC 267
Query: 353 VDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDK 412
+ + + SGS D T++VWD+ ++T++ H V ++F G +V+ D+
Sbjct: 268 LQYDNR--VIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRF---ANGIMVTCSKDR 322
Query: 413 KVNIF---NDGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRSVNKWGV 459
+ ++ + + R L GH V +D I SA DR++ W +
Sbjct: 323 SIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSM 372
>7303130 [R] KOG0645 WD40 repeat protein
Length = 335
Score = 68.2 bits (165), Expect = 2e-11
Identities = 53/213 (24%), Positives = 88/213 (40%), Gaps = 15/213 (7%)
Query: 259 LYKNDARFAQVRCHPCNSFIGSTSFDKT---WILIDTVKQAPILIQEGHSAEVFSLSFHN 315
L + R V HP + S DK W L ++ +GH + + +
Sbjct: 10 LQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRWSP 69
Query: 316 DGSLVSTAGLDAIALIWDIRSGKNIMS--LQGHSKPIYSVDWSQNGYQLASGSGDGTIKV 373
G +++A DA IW SG+ + L+GH + SV WS++G LA+ S D ++ +
Sbjct: 70 CGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWI 129
Query: 374 WDIRKKGNVE---TILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN----DGNWIKER 426
W++ E + H V +V ++ L S+ YD + +F D +W
Sbjct: 130 WEVAGDDEFECAAVLNPHTQDVKRVVWHPTK-DILASASYDNTIKMFAEEPIDNDWDCTA 188
Query: 427 SLEGHLDKVMSIDI--VGPDIYSAGWDRSVNKW 457
+L H V ID G + S D ++ W
Sbjct: 189 TLTSHTSTVWGIDFDADGERLVSCSDDTTIKIW 221
Score = 64.7 bits (156), Expect = 3e-10
Identities = 61/276 (22%), Positives = 109/276 (39%), Gaps = 40/276 (14%)
Query: 179 EKPISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSG--TKISGLDWSVDSKNI 236
++ I EI SP G +A S+ ++ S + CN +L G ++ + WS +
Sbjct: 59 KRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLL 118
Query: 237 FVCTHDGRIVIYD-SGDET--TVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTV 293
C+ D + I++ +GD+ +L + +V HP + S S+D T I
Sbjct: 119 ATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDILASASYDNT---IKMF 175
Query: 294 KQAPI-------LIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKN------- 339
+ PI H++ V+ + F DG + + D IW N
Sbjct: 176 AEEPIDNDWDCTATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIWRAYHPGNTAGVATP 235
Query: 340 --------IMSLQG-HSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETIL---- 386
+ ++ G HS+ IY V W + +A+ GD I+++ +
Sbjct: 236 DQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKESSDSKPDEPTFEQI 295
Query: 387 -----AHNSIVSQVKFNKQNGGYLVSSGYDKKVNIF 417
AH+ V+ V++N G L+S D + I+
Sbjct: 296 TAEEGAHDQDVNSVQWNPVVAGQLISCSDDGTIKIW 331
>7298053 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 860
Score = 68.2 bits (165), Expect = 2e-11
Identities = 62/266 (23%), Positives = 123/266 (45%), Gaps = 12/266 (4%)
Query: 194 MACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYDSGDE 253
M C ++G++ +++ ++ + + + + I + D +I +++
Sbjct: 1 MLCALYNGHVHIMNYENQQMVKDFEVCDVPVRSARFVARKNWILTGSDDMQIRVFNYN-- 58
Query: 254 TTVKILYKNDARFAQVRC---HPCNSFIGSTSFDKTWILIDTVKQ-APILIQEGHSAEVF 309
T++ ++ +A +RC HP + ++S D L + K A + EGH+ V
Sbjct: 59 -TLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSDDMLIKLWNWEKMWACQRVFEGHTHYVM 117
Query: 310 SLSFH-NDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ--LASGS 366
+ F+ D + ++A LD +W + S +L+GH K + VD+ G + L SG+
Sbjct: 118 QIVFNPKDNNTFASASLDRTVKVWQLGSNFANFTLEGHEKGVNCVDYYHGGDKPYLISGA 177
Query: 367 GDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKER 426
D +K+WD + K V+T+ H +S V F+ + L S D V I++ G + E
Sbjct: 178 DDRLVKIWDYQNKTCVQTLEGHAQNISAVCFHPELPIVLTGS-EDGTVRIWHSGTYRLET 236
Query: 427 SLEGHLDKVMSIDIV-GPDIYSAGWD 451
L ++V +I + G + + G+D
Sbjct: 237 CLNYGFERVWTISSMRGTNNVALGYD 262
>7295052 [U] KOG0277 Peroxisomal targeting signal type 2 receptor
Length = 339
Score = 68.2 bits (165), Expect = 2e-11
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 316 DGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQ--NGYQLASGSGDGTIKV 373
DGSL GLD + + + ++ LQ H +YS+DW + N + L SGS D T+K+
Sbjct: 92 DGSLQIWCGLDGESASNQLTPKQPLICLQEHKNEVYSLDWGEKWNYHTLLSGSWDCTLKL 151
Query: 374 WDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKE--RSLEGH 431
WD ++ ++ T + HN ++ KF+ S D +N++N ++ + S+E H
Sbjct: 152 WDCNRQNSITTFVGHNDLIYGAKFSPLIANLFASVSTDGHLNLWNSLDFAGKPLMSIEAH 211
Query: 432 LDKVMSID----------IVGPDIYSAGWD 451
+ + D G D GWD
Sbjct: 212 ASEALCCDWSHFDRNVLVTGGSDGLIRGWD 241
Score = 51.6 bits (122), Expect = 2e-06
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 280 STSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHN-DGSLVSTAGLDAIALIWDIR--S 336
S S+D T L D +Q I GH+ ++ F +L ++ D +W+ +
Sbjct: 142 SGSWDCTLKLWDCNRQNSITTFVGHNDLIYGAKFSPLIANLFASVSTDGHLNLWNSLDFA 201
Query: 337 GKNIMSLQGHSKPIYSVDWSQ-NGYQLASGSGDGTIKVWDIRK-KGNVETILAHNSIVSQ 394
GK +MS++ H+ DWS + L +G DG I+ WD+RK + +V + + V +
Sbjct: 202 GKPLMSIEAHASEALCCDWSHFDRNVLVTGGSDGLIRGWDLRKMRTHVFELYSGEFAVRR 261
Query: 395 VKFNKQNGGYLVSSGYDKKVNIFN 418
+ + + L S+ YD I+N
Sbjct: 262 LACSPHSAAVLASANYDFTTRIWN 285
>SPAC12G12.14c [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 509
Score = 67.8 bits (164), Expect = 3e-11
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 4/166 (2%)
Query: 298 ILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQ 357
+ I + H EV ++F + S TA D +W+ + L GH + +VDW
Sbjct: 157 VKIVQAHEMEVRDVAFSPNDSKFVTASDDGSLKVWNFHMSTEELKLTGHGWDVKTVDWHP 216
Query: 358 NGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNG-GYLVSSGYDKKVNI 416
+ LASGS D +K WD R + T+ H + + Q F K G YL + D +
Sbjct: 217 SKGLLASGSKDNLVKFWDPRTGTCIATLHGHKNTIMQASFQKNFGSNYLATVSRDSTCRV 276
Query: 417 FNDGNWIKERSLEGHLDKVMSI--DIVGPDIYSAGW-DRSVNKWGV 459
F+ R L GH V + + P++ + G D SVN + +
Sbjct: 277 FDLRAMKDVRVLRGHEKDVNCVTWHPLYPNLLTTGGSDGSVNHYSL 322
>Hs5174447 [T] KOG0279 G protein beta subunit-like protein
Length = 317
Score = 67.8 bits (164), Expect = 3e-11
Identities = 56/189 (29%), Positives = 86/189 (44%), Gaps = 13/189 (6%)
Query: 280 STSFDKTWILIDTVKQA-----PILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDI 334
S S DKT I+ + P GHS V + +DG + D +WD+
Sbjct: 33 SASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDL 92
Query: 335 RSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRK--KGNVETILAHNSIV 392
+G GH+K + SV +S + Q+ SGS D TIK+W+ K V+ +H+ V
Sbjct: 93 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWV 151
Query: 393 SQVKFNKQNGG-YLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPD---IYSA 448
S V+F+ + +VS G+DK V ++N N + + GH + ++ V PD S
Sbjct: 152 SCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV-TVSPDGSLCASG 210
Query: 449 GWDRSVNKW 457
G D W
Sbjct: 211 GKDGQAMLW 219
Score = 62.8 bits (151), Expect = 1e-09
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 182 ISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTK-ISGLDWSVDSKNIFVCT 240
+S++ S G GSW G L L D + R + TK + + +S D++ I +
Sbjct: 66 VSDVVISSDGQFALSGSWDGTLRLWDLTTGTT-TRRFVGHTKDVLSVAFSSDNRQIVSGS 124
Query: 241 HDGRIVIYDSGDETTVKILYKNDARFAQVRC-----HPCNSFIGSTSFDK---TWILIDT 292
D I ++++ K ++++ V C + N I S +DK W L +
Sbjct: 125 RDKTIKLWNTLG--VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC 182
Query: 293 VKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYS 352
+ + GH+ + +++ DGSL ++ G D A++WD+ GK++ +L G I +
Sbjct: 183 KLKTNHI---GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GDIINA 238
Query: 353 VDWSQNGYQLASGSGDGTIKVWDIRKK 379
+ +S N Y L + +G +IK+WD+ K
Sbjct: 239 LCFSPNRYWLCAATGP-SIKIWDLEGK 264
Score = 55.8 bits (133), Expect = 1e-07
Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 11/151 (7%)
Query: 319 LVSTAGLDAIALIWDIRS-----GKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKV 373
++ +A D ++W + G +L+GHS + V S +G SGS DGT+++
Sbjct: 30 MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRL 89
Query: 374 WDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSL-EGHL 432
WD+ + H V V F+ N +VS DK + ++N K E H
Sbjct: 90 WDLTTGTTTRRFVGHTKDVLSVAFSSDNR-QIVSGSRDKTIKLWNTLGVCKYTVQDESHS 148
Query: 433 DKVMSI----DIVGPDIYSAGWDRSVNKWGV 459
+ V + + P I S GWD+ V W +
Sbjct: 149 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
>At3g15980 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 921
Score = 67.8 bits (164), Expect = 3e-11
Identities = 59/204 (28%), Positives = 94/204 (45%), Gaps = 5/204 (2%)
Query: 242 DGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQ-APILI 300
D I +Y+ VK+ + V HP ++ S+S D L D A I
Sbjct: 81 DMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQI 140
Query: 301 QEGHSAEVFSLSFH-NDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNG 359
EGHS V + F+ D + ++A LD IW++ S +L H K + VD+ G
Sbjct: 141 FEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 200
Query: 360 YQ--LASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIF 417
+ L +GS D T KVWD + K V+T+ H VS V F+ + +++ D V I+
Sbjct: 201 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPEL-PIIITGSEDGTVRIW 259
Query: 418 NDGNWIKERSLEGHLDKVMSIDIV 441
+ + E +L L++V +I +
Sbjct: 260 HATTYRLENTLNYGLERVWAIGYI 283
>At1g79990 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 913
Score = 67.8 bits (164), Expect = 3e-11
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 5/198 (2%)
Query: 245 IVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQ-APILIQEG 303
I +Y+ +K+ + V HP ++ S+S D L D K I EG
Sbjct: 74 IRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEG 133
Query: 304 HSAEVFSLSFH-NDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ- 361
HS V ++F+ D + ++A LD IW++ S +L H K + VD+ G +
Sbjct: 134 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKP 193
Query: 362 -LASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDG 420
L +GS D T KVWD + K V+T+ H VS V F+ + +++ D V I++
Sbjct: 194 YLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPEL-PIIITGSEDGTVRIWHAT 252
Query: 421 NWIKERSLEGHLDKVMSI 438
+ E +L L++V +I
Sbjct: 253 TYRLENTLNYGLERVWAI 270
>Hs4758032 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 906
Score = 67.0 bits (162), Expect = 6e-11
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 9/205 (4%)
Query: 255 TVKILYKNDARFAQVRC---HPCNSFIGSTSFDKTWILIDTVKQ-APILIQEGHSAEVFS 310
T++ ++ +A +RC HP FI ++S D L D K+ + + EGH+ V
Sbjct: 88 TLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQ 147
Query: 311 LSFH-NDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ--LASGSG 367
+ + D + ++A LD +W + S +L+GH K + +D+ G + L SG+
Sbjct: 148 IVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGAD 207
Query: 368 DGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERS 427
D +K+WD + K V+T+ H VS F+ + +++ D V I++ + E +
Sbjct: 208 DRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPEL-PIIITGSEDGTVRIWHSSTYRLEST 266
Query: 428 LEGHLDKVMSI-DIVGPDIYSAGWD 451
L +++V + + G + + G+D
Sbjct: 267 LNYGMERVWCVASLRGSNNVALGYD 291
>At4g15900 [A] KOG0285 Pleiotropic regulator 1
Length = 486
Score = 67.0 bits (162), Expect = 6e-11
Identities = 38/139 (27%), Positives = 65/139 (46%)
Query: 275 NSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDI 334
++++ S DK D + I GH + V+ L+ H ++ T G D++ +WDI
Sbjct: 230 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDI 289
Query: 335 RSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQ 394
R+ I +L GH + SV Q+ +GS D TIK WD+R + T+ H V
Sbjct: 290 RTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRA 349
Query: 395 VKFNKQNGGYLVSSGYDKK 413
+ + + + +S + K
Sbjct: 350 MTLHPKENAFASASADNTK 368
Score = 58.5 bits (140), Expect = 2e-08
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 1/146 (0%)
Query: 273 PCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIW 332
P N + + S D+T + D L GH +V L+ N + + +AG D W
Sbjct: 186 PSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCW 245
Query: 333 DIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIV 392
D+ K I S GH +Y + L +G D +VWDIR K + + H++ V
Sbjct: 246 DLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTV 305
Query: 393 SQVKFNKQNGGYLVSSGYDKKVNIFN 418
V F + +V+ +D + ++
Sbjct: 306 CSV-FTRPTDPQVVTGSHDTTIKFWD 330
>At5g64730 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 343
Score = 66.2 bits (160), Expect = 9e-11
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 5/163 (3%)
Query: 294 KQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSV 353
K+A IL +GH V + F+ DG+ T G D +W+ G I + + H + + V
Sbjct: 9 KEAHIL--KGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDV 66
Query: 354 DWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKK 413
+ + + S GD + WD+ + H+ V+ VKFN + +VS+G+D+
Sbjct: 67 HVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFN-DSSSVVVSAGFDRS 125
Query: 414 VNIFNDGNWIKE--RSLEGHLDKVMSIDIVGPDIYSAGWDRSV 454
+ +++ + E + ++ LD VMS+ + +I D +V
Sbjct: 126 LRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTEIIGGSVDGTV 168
>At1g49040 [T] KOG2127 Calmodulin-binding protein CRAG contains DENN domain
Length = 1264
Score = 66.2 bits (160), Expect = 9e-11
Identities = 57/214 (26%), Positives = 104/214 (47%), Gaps = 10/214 (4%)
Query: 230 SVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSF--IGSTSFDKTW 287
S D I + D ++++D + T ++L + +QV C S + + + D T
Sbjct: 983 SSDRGKIVSGSDDLSVIVWD---KQTTQLLEELKGHDSQVSCVKMLSGERVLTAAHDGTV 1039
Query: 288 ILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHS 347
+ D + S+ + SL + + +++ AG D +A IWDIRSGK + L+GH+
Sbjct: 1040 KMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHT 1099
Query: 348 KPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILA-HNSIVSQVKFNKQNGGYLV 406
K I S+ ++ L +GS D T +VW + +G+ + +LA H V V+++ + G +
Sbjct: 1100 KWIRSIRMVED--TLITGSDDWTARVWSV-SRGSCDAVLACHAGPVQSVEYSPFDKGIIT 1156
Query: 407 SSGYDKKVNIFNDGNWIK-ERSLEGHLDKVMSID 439
S ND IK +++ H ++SI+
Sbjct: 1157 GSADGLLRFWENDEGGIKCVKNITLHSSSILSIN 1190
Score = 60.5 bits (145), Expect = 5e-09
Identities = 38/158 (24%), Positives = 80/158 (50%), Gaps = 4/158 (2%)
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
+GH+ V ++S +D + + D ++WD ++ + + L+GH + V +G +
Sbjct: 973 KGHTGTVRAIS--SDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKML-SGER 1029
Query: 362 LASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGN 421
+ + + DGT+K+WD+R V T+ +S + ++++ G L ++G D NI++ +
Sbjct: 1030 VLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTG-ILAAAGRDTVANIWDIRS 1088
Query: 422 WIKERSLEGHLDKVMSIDIVGPDIYSAGWDRSVNKWGV 459
+ L+GH + SI +V + + D + W V
Sbjct: 1089 GKQMHKLKGHTKWIRSIRMVEDTLITGSDDWTARVWSV 1126
>SPBC32F12.02 [R] KOG4155 FOG: WD40 repeat
Length = 302
Score = 65.9 bits (159), Expect = 1e-10
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 3/185 (1%)
Query: 230 SVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWIL 289
S D + I + DGRI ++D+ + + L + P FI S L
Sbjct: 112 SPDGQTIAFTSVDGRIAVWDNPSDCKISELDTKGKFGLCIDYSPNGRFIVSGHQTGQLFL 171
Query: 290 IDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKP 349
I T + GH++ V S++F +L++ AG + I+D+ SG + L+GH+
Sbjct: 172 ISTETGRLFHVLSGHTSPVRSVAFSPGSTLLAAAGDSKMITIYDVLSGDQVGQLRGHAAW 231
Query: 350 IYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSG 409
I++V ++ G L S +G IK+WDI + T + + V + K G++V +G
Sbjct: 232 IFAVAFNPVGDLLLSADVEGKIKIWDIDTMECISTQSETDGAIWAVAWYK--NGFIV-AG 288
Query: 410 YDKKV 414
DK +
Sbjct: 289 ADKSI 293
>At5g13480 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 679
Score = 65.9 bits (159), Expect = 1e-10
Identities = 55/221 (24%), Positives = 91/221 (40%), Gaps = 26/221 (11%)
Query: 182 ISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTH 241
I+ + +P G + GS SG +L + I + WS ++N V
Sbjct: 126 INRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWS-HNENYMVSGD 184
Query: 242 DGRIVIYDSGDETTVKI---LYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPI 298
DG + Y + VK +K R ++ F+G + ++ +
Sbjct: 185 DGGTLKYWQNNMNNVKANKTAHKESIRDLRI------GFLGYIGKG-----VIEIRFGVM 233
Query: 299 LIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQN 358
GH +V S+ +H SL+ + G D + +WD RSG+ + SL GH + SV W+QN
Sbjct: 234 PCNAGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQN 293
Query: 359 GYQLASGSGDGTIK-----------VWDIRKKGNVETILAH 388
G L + S D IK ++DIR +++ H
Sbjct: 294 GNWLLTASKDQIIKHLYDTYACNLQLYDIRTMKELQSFRGH 334
Score = 49.7 bits (117), Expect = 9e-06
Identities = 26/75 (34%), Positives = 40/75 (52%), Gaps = 1/75 (1%)
Query: 345 GHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGY 404
GH + SVDW L SG D +K+WD R + ++ H +IV VK+N QNG +
Sbjct: 238 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWN-QNGNW 296
Query: 405 LVSSGYDKKVNIFND 419
L+++ D+ + D
Sbjct: 297 LLTASKDQIIKHLYD 311
>Hs22043515 [S] KOG0295 WD40 repeat-containing protein
Length = 414
Score = 65.5 bits (158), Expect = 2e-10
Identities = 35/114 (30%), Positives = 57/114 (49%), Gaps = 4/114 (3%)
Query: 273 PCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIW 332
P + S D+ W ++ K +L GH+ + FH G ++T+ D +W
Sbjct: 3 PHKDILVSCGEDRLWKVLGLPKCNVLLTGFGHTDWLSDCCFHPSGDKLATSSGDTTVKLW 62
Query: 333 DIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETIL 386
D+ G I++ +GHS+ ++S W G +AS S D T K+WD+ N ET+L
Sbjct: 63 DLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDV----NSETVL 112
>YPL151c [A] KOG0285 Pleiotropic regulator 1
Length = 451
Score = 64.7 bits (156), Expect = 3e-10
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 272 HPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALI 331
HP ++ S S DKT D K I GH + V ++S H L++TAG D++ +
Sbjct: 194 HP---YLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKL 250
Query: 332 WDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHN 389
WD+R+ +++L GH PI V + Q+ S S D T+++WD+ G +L H+
Sbjct: 251 WDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDV-VAGKTMKVLTHH 307
Score = 52.8 bits (125), Expect = 1e-06
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 3/146 (2%)
Query: 316 DGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWD 375
D T D +WD+ +GK +L GH + V S L S S D T+K WD
Sbjct: 151 DNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRHPYLFSVSEDKTVKCWD 210
Query: 376 IRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKV 435
+ K + H S V V + + ++G D + +++ I +L GH +
Sbjct: 211 LEKNQIIRDYYGHLSGVRTVSIH-PTLDLIATAGRDSVIKLWDMRTRIPVITLVGHKGPI 269
Query: 436 MSIDI--VGPDIYSAGWDRSVNKWGV 459
+ V P + S+ D +V W V
Sbjct: 270 NQVQCTPVDPQVVSSSTDATVRLWDV 295
>Hs19913369 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 808
Score = 64.7 bits (156), Expect = 3e-10
Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 6/147 (4%)
Query: 297 PILIQEG-----HSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIY 351
PIL+Q H ++ S++ + L++T D A +W + + + GH + ++
Sbjct: 466 PILLQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLW 525
Query: 352 SVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYD 411
V +S LA+ S DGTIK+W ++ ++T H++ V +V F G L+SSG D
Sbjct: 526 CVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAF-VSRGTQLLSSGSD 584
Query: 412 KKVNIFNDGNWIKERSLEGHLDKVMSI 438
V ++ N R+L+ H DKV +
Sbjct: 585 GLVKLWTIKNNECVRTLDAHEDKVWGL 611
Score = 52.0 bits (123), Expect = 2e-06
Identities = 34/158 (21%), Positives = 70/158 (43%), Gaps = 1/158 (0%)
Query: 262 NDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVS 321
+D V P + + + S D+T L + + + GH ++ + F +++
Sbjct: 478 HDKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLA 537
Query: 322 TAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGN 381
TA D +W ++ + + +GH + V + G QL S DG +K+W I+
Sbjct: 538 TASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNNEC 597
Query: 382 VETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFND 419
V T+ AH V + ++ + + ++ D +V ++ D
Sbjct: 598 VRTLDAHEDKVWGLHCSRLD-DHALTGASDSRVILWKD 634
>ECU04g1250 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 371
Score = 64.7 bits (156), Expect = 3e-10
Identities = 55/190 (28%), Positives = 89/190 (45%), Gaps = 9/190 (4%)
Query: 227 LDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKT 286
LDWS + FV G V + D+ +V ++ + + V+ +G++ D T
Sbjct: 85 LDWSATN---FVVIGLGESVYGYNVDDKSVTEIHAGENYISSVKSSGNILCVGTS--DGT 139
Query: 287 WILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGH 346
LID + H+A V SLS++ G+++S+ +DIRSG+ I + GH
Sbjct: 140 IRLIDISVNKEVHKARNHNARVSSLSWN--GNVISSGDKAGRLCNFDIRSGR-ISVVGGH 196
Query: 347 SKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLV 406
S+ I + WS + LASG D I++W + N +T+ H S V + + G L
Sbjct: 197 SQEICGLAWSADMKYLASGGNDNVIRIWQL-GNNNSQTLSGHKSAVKALAWCPWRSGILT 255
Query: 407 SSGYDKKVNI 416
S G K + I
Sbjct: 256 SGGGAKDMTI 265
>CE29560 [S] KOG0300 WD40 repeat-containing protein
Length = 486
Score = 64.3 bits (155), Expect = 4e-10
Identities = 46/187 (24%), Positives = 93/187 (49%), Gaps = 9/187 (4%)
Query: 280 STSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSG-K 338
+ S+D+T + D K + I GH +E+ S H++ LV T+ D+ +WD R +
Sbjct: 297 TASWDRTANVWDVEKGEVVNILSGHESELNHCSTHSNQKLVLTSSKDSTFRLWDFREAIQ 356
Query: 339 NIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFN 398
++ QGH + SV ++ + Y++ S S D T+K+WD+R + +S ++V +
Sbjct: 357 SVAVFQGHQDSVTSVSFNTD-YRIVSSSDDATVKIWDLRNMRTPLATIRLSSPANRVAIS 415
Query: 399 KQNGGYLVSSGYDKKVNIFN-DGNWIKERSLEGHLDKVMSI-----DIVGPDIYSAGWDR 452
K + + ++ V I++ +GN + +++++ + ++ +AG+DR
Sbjct: 416 KSHPVIAIPMD-NRHVRIYDLNGNRLPRMPNRRCHERMVTCCAWLDEHPANNLLTAGFDR 474
Query: 453 SVNKWGV 459
V W V
Sbjct: 475 MVAAWKV 481
Score = 55.5 bits (132), Expect = 2e-07
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 3/125 (2%)
Query: 295 QAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVD 354
+ P++ GH A V + G + TA D A +WD+ G+ + L GH +
Sbjct: 270 RVPVMRLTGHRAPVSCCEWLAGGQQMVTASWDRTANVWDVEKGEVVNILSGHESELNHCS 329
Query: 355 WSQNGYQLASGSGDGTIKVWDIRKK-GNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKK 413
N + + S D T ++WD R+ +V H V+ V FN +VSS D
Sbjct: 330 THSNQKLVLTSSKDSTFRLWDFREAIQSVAVFQGHQDSVTSVSFNTDY--RIVSSSDDAT 387
Query: 414 VNIFN 418
V I++
Sbjct: 388 VKIWD 392
>CE26861 [S] KOG0300 WD40 repeat-containing protein
Length = 484
Score = 64.3 bits (155), Expect = 4e-10
Identities = 46/187 (24%), Positives = 93/187 (49%), Gaps = 9/187 (4%)
Query: 280 STSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSG-K 338
+ S+D+T + D K + I GH +E+ S H++ LV T+ D+ +WD R +
Sbjct: 295 TASWDRTANVWDVEKGEVVNILSGHESELNHCSTHSNQKLVLTSSKDSTFRLWDFREAIQ 354
Query: 339 NIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFN 398
++ QGH + SV ++ + Y++ S S D T+K+WD+R + +S ++V +
Sbjct: 355 SVAVFQGHQDSVTSVSFNTD-YRIVSSSDDATVKIWDLRNMRTPLATIRLSSPANRVAIS 413
Query: 399 KQNGGYLVSSGYDKKVNIFN-DGNWIKERSLEGHLDKVMSI-----DIVGPDIYSAGWDR 452
K + + ++ V I++ +GN + +++++ + ++ +AG+DR
Sbjct: 414 KSHPVIAIPMD-NRHVRIYDLNGNRLPRMPNRRCHERMVTCCAWLDEHPANNLLTAGFDR 472
Query: 453 SVNKWGV 459
V W V
Sbjct: 473 MVAAWKV 479
Score = 55.5 bits (132), Expect = 2e-07
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 3/125 (2%)
Query: 295 QAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVD 354
+ P++ GH A V + G + TA D A +WD+ G+ + L GH +
Sbjct: 268 RVPVMRLTGHRAPVSCCEWLAGGQQMVTASWDRTANVWDVEKGEVVNILSGHESELNHCS 327
Query: 355 WSQNGYQLASGSGDGTIKVWDIRKK-GNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKK 413
N + + S D T ++WD R+ +V H V+ V FN +VSS D
Sbjct: 328 THSNQKLVLTSSKDSTFRLWDFREAIQSVAVFQGHQDSVTSVSFNTDY--RIVSSSDDAT 385
Query: 414 VNIFN 418
V I++
Sbjct: 386 VKIWD 390
>7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 481
Score = 63.9 bits (154), Expect = 5e-10
Identities = 37/138 (26%), Positives = 65/138 (46%), Gaps = 1/138 (0%)
Query: 280 STSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKN 339
S S D T L + + GH V + + D L+++A D +W G+
Sbjct: 343 SCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQY 402
Query: 340 IMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNK 399
+ + +GH + +Y+V WS + + SGS D T+KVW ++ K + + H V V +
Sbjct: 403 MATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDW-A 461
Query: 400 QNGGYLVSSGYDKKVNIF 417
+G + S G DK + ++
Sbjct: 462 PDGSRVASGGKDKVIKLW 479
Score = 63.5 bits (153), Expect = 6e-10
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 8/172 (4%)
Query: 273 PCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIW 332
P + + S S D T L D + P GH V +S+ DG +++ +IW
Sbjct: 122 PDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDGKRLASGCKAGSIIIW 181
Query: 333 DIRSGKNI-MSLQGHSKPIYSVDW-----SQNGYQLASGSGDGTIKVWDIRKKGNVETIL 386
D +G+ L GH K I + W +LAS SGDG ++WD++ + I
Sbjct: 182 DPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNIA 241
Query: 387 AHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSI 438
H + V+ V++ G + +S D+ V ++ + I R+ GH V +I
Sbjct: 242 GHTNAVTAVRWG--GAGLIYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNI 291
Score = 55.1 bits (131), Expect = 2e-07
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 10/163 (6%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH+ V SL+F DG+ +++ D +WD+ + + GH + + V W+ +G +L
Sbjct: 110 GHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDGKRL 169
Query: 363 ASGSGDGTIKVWDI---RKKGNVETILAHNSIVSQVKFNKQNGG----YLVSSGYDKKVN 415
ASG G+I +WD ++KG + H ++ + + + L S+ D
Sbjct: 170 ASGCKAGSIIIWDPETGQQKG--RPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCR 227
Query: 416 IFNDGNWIKERSLEGHLDKVMSIDIVGPD-IYSAGWDRSVNKW 457
I++ ++ GH + V ++ G IY++ DR+V W
Sbjct: 228 IWDVKLGQCLMNIAGHTNAVTAVRWGGAGLIYTSSKDRTVKMW 270
>7293188 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 296
Score = 63.9 bits (154), Expect = 5e-10
Identities = 49/164 (29%), Positives = 75/164 (44%), Gaps = 10/164 (6%)
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
+ H + V SL G ++ T G D +W I + MSL GH++ I V ++
Sbjct: 15 KAHDSRVTSLDLGETGRVLVTGGEDRNVNLWAIGQNECFMSLTGHNRSIDCVRFAYKDNF 74
Query: 362 LASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIF---N 418
+ S G I+ WD+ + T+ H V + FN +G Y+VS D V ++ N
Sbjct: 75 VYSADDIGIIRRWDLNSQKIYSTLNGHMKSVRTLDFN-PSGEYVVSGSNDTTVRLWDVQN 133
Query: 419 DGNWIKERSLEGHLDKVMSIDIVGPD---IYSAGWDRSVNKWGV 459
+ N IK GH+ V S+ PD I SAG + S+ W +
Sbjct: 134 ENNCIK--VCRGHMSHVNSVKF-SPDGLWIASAGLEGSILIWDI 174
Score = 57.8 bits (138), Expect = 3e-08
Identities = 61/219 (27%), Positives = 95/219 (42%), Gaps = 19/219 (8%)
Query: 182 ISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTH 241
++ ++ G ++ G N++L ++ + C SL+G S K+ FV +
Sbjct: 21 VTSLDLGETGRVLVTGGEDRNVNLW--AIGQNECFMSLTGHNRSIDCVRFAYKDNFVYSA 78
Query: 242 DGRIVIYDSGDETTVKILYKNDARFAQVRC---HPCNSFIGSTSFDKTWILIDTVKQAP- 297
D I I D + KI + VR +P ++ S S D T L D +
Sbjct: 79 DD-IGIIRRWDLNSQKIYSTLNGHMKSVRTLDFNPSGEYVVSGSNDTTVRLWDVQNENNC 137
Query: 298 ILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHS--KPIYSVDW 355
I + GH + V S+ F DG +++AGL+ LIWDIR K IM I V +
Sbjct: 138 IKVCRGHMSHVNSVKFSPDGLWIASAGLEGSILIWDIRKSKQIMEFIADPPVTAITCVQF 197
Query: 356 SQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQ 394
+ LA+G DGT+ ++D L H +VSQ
Sbjct: 198 HPFEFLLAAGRVDGTVSIYD----------LEHQQLVSQ 226
>YLR129w [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 943
Score = 63.5 bits (153), Expect = 6e-10
Identities = 58/248 (23%), Positives = 97/248 (38%), Gaps = 18/248 (7%)
Query: 189 PGGDLMACGSWSGNLSLVDNSLSKIYCN-RSLSGTKISGLDWSVDSKNIFVCTHDGRIVI 247
PGG L+ G+ +G L L D + S + I LD + D K + + D +
Sbjct: 440 PGGLLVILGTRNGELQLFDLASSSLLDTIEDAHDAAIWSLDLTSDGKRLVTGSADKTVKF 499
Query: 248 YDSGDETTV------------KILYKNDARFAQ----VRCHPCNSFIGSTSFDKTWILID 291
+D E ++ K+ + VR P + ++ + D T +
Sbjct: 500 WDFKVENSLVPGTKNKFLPVLKLHHDTTLELTDDILCVRVSPDDRYLAISLLDNTVKVFF 559
Query: 292 TVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIY 351
L GH V S+ D ++ T+ D IW + G SL H I
Sbjct: 560 LDSMKFYLSLYGHKLPVLSIDISFDSKMIITSSADKNIKIWGLDFGDCHKSLFAHQDSIM 619
Query: 352 SVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYD 411
+V + + S S D +K WD K ++ + AH S V + +GG++VSS +D
Sbjct: 620 NVKFLPQSHNFFSCSKDAVVKYWDGEKFECIQKLYAHQSEVWALAV-ATDGGFVVSSSHD 678
Query: 412 KKVNIFND 419
+ I+ +
Sbjct: 679 HSIRIWEE 686
Score = 55.5 bits (132), Expect = 2e-07
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Query: 285 KTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQ 344
K W D + + +L GH A + L F G+ + + D+ ++WD+ + L+
Sbjct: 104 KVW---DLMSKTVLLNFNGHKAAITLLQFDGTGTRLISGSKDSNIIVWDLVGEVGLYKLR 160
Query: 345 GHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGY 404
H I W Q L S S DG IK+WD++ +ET +AH +
Sbjct: 161 SHKDSITGF-WCQGEDWLISTSKDGMIKLWDLKTHQCIETHIAHTGECWGLAVKDD---L 216
Query: 405 LVSSGYDKKVNIF 417
L+++G D +V I+
Sbjct: 217 LITTGTDSQVKIW 229
Score = 52.0 bits (123), Expect = 2e-06
Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 2/152 (1%)
Query: 306 AEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASG 365
AE L H D L++ D + +WD+ S +++ GH I + + G +L SG
Sbjct: 80 AECTYLEAHKDTDLLAVGYADGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGTRLISG 139
Query: 366 SGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKE 425
S D I VWD+ + + + +H ++ F Q +L+S+ D + +++
Sbjct: 140 SKDSNIIVWDLVGEVGLYKLRSHKDSIT--GFWCQGEDWLISTSKDGMIKLWDLKTHQCI 197
Query: 426 RSLEGHLDKVMSIDIVGPDIYSAGWDRSVNKW 457
+ H + + + + + G D V W
Sbjct: 198 ETHIAHTGECWGLAVKDDLLITTGTDSQVKIW 229
>CE18578 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 331
Score = 63.5 bits (153), Expect = 6e-10
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
+GHS V L F D S + + G D +WD+ +G + H+ + +V S+ G
Sbjct: 78 KGHSGAVMDLKFTTDSSSLVSCGTDKSVRVWDMETGTCARRFRTHTDFVNAVHPSRRGVT 137
Query: 362 L-ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDG 420
L AS S DGT +V D+R K V+T + + V FN + ++S G D + +++
Sbjct: 138 LVASASDDGTCRVHDMRTKEPVKT-YTNRYQQTAVTFN-DSSDQVISGGIDNVLKVWDMR 195
Query: 421 NWIKERSLEGHLDKVMSIDI--VGPDIYSAGWDRSVNKWGV 459
+L GH D + I + G I S D +V +W +
Sbjct: 196 RDEITYTLTGHRDTITGISLSPSGKFIISNSMDCTVRQWDI 236
Score = 55.8 bits (133), Expect = 1e-07
Identities = 30/117 (25%), Positives = 60/117 (50%), Gaps = 2/117 (1%)
Query: 296 APILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSG-KNIMSLQGHSKPIYSVD 354
AP ++ GH E+++ +F DG+ ++T+G D W++ +N +++GHS + +
Sbjct: 29 APTMVLLGHEGEIYTGAFSPDGTCLATSGYDQKIFFWNVYGECENFSTIKGHSGAVMDLK 88
Query: 355 WSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYD 411
++ + L S D +++VWD+ H V+ V +++ G LV+S D
Sbjct: 89 FTTDSSSLVSCGTDKSVRVWDMETGTCARRFRTHTDFVNAVHPSRR-GVTLVASASD 144
Score = 54.7 bits (130), Expect = 3e-07
Identities = 37/157 (23%), Positives = 71/157 (44%), Gaps = 6/157 (3%)
Query: 224 ISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCN---SFIGS 280
+ L ++ DS ++ C D + ++D T + ++ F HP + + S
Sbjct: 84 VMDLKFTTDSSSLVSCGTDKSVRVWDMETGTCAR-RFRTHTDFVNA-VHPSRRGVTLVAS 141
Query: 281 TSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNI 340
S D T + D + P+ + +++F++ V + G+D + +WD+R +
Sbjct: 142 ASDDGTCRVHDMRTKEPVKTYTNRYQQT-AVTFNDSSDQVISGGIDNVLKVWDMRRDEIT 200
Query: 341 MSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIR 377
+L GH I + S +G + S S D T++ WDIR
Sbjct: 201 YTLTGHRDTITGISLSPSGKFIISNSMDCTVRQWDIR 237
>SPAC6B12.15 [T] KOG0279 G protein beta subunit-like protein
Length = 314
Score = 63.2 bits (152), Expect = 8e-10
Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GHS V + D +A D +WD+ G+ GH+ + SV S + Q+
Sbjct: 61 GHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQV 120
Query: 363 ASGSGDGTIKVWDIRKKGNVETIL---AHNSIVSQVKFNKQNGGY-LVSSGYDKKVNIFN 418
SGS D TIK+W+I GN + + H+ VS V+F+ VS+G+DK V +++
Sbjct: 121 VSGSRDKTIKIWNI--IGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWD 178
Query: 419 DGNWIKERSLEGHLDKVMSIDIVGPD---IYSAGWDRSVNKW 457
+ S GH V ++ I PD S G D ++ W
Sbjct: 179 LETFSLRTSHYGHTGYVSAVTI-SPDGSLCASGGRDGTLMLW 219
Score = 59.3 bits (142), Expect = 1e-08
Identities = 52/167 (31%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGL-DAIALIW-----DIRSGKNIMSLQGHSKPIYSVDW 355
EGHS V SLS + + +G D ++W D+ G L GHS +
Sbjct: 12 EGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCAL 71
Query: 356 SQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVN 415
S + + S S D TI++WD+ K + H S V V + N +VS DK +
Sbjct: 72 SFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDN-RQVVSGSRDKTIK 130
Query: 416 IFN-DGNWIKERSLEGHLDKVMSIDI-VGPD---IYSAGWDRSVNKW 457
I+N GN + GH D V + PD SAGWD++V W
Sbjct: 131 IWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVW 177
Score = 54.7 bits (130), Expect = 3e-07
Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 17/223 (7%)
Query: 182 ISEINTSPGG-DLMACGSWSGNL---SLVDNSLSKIYCNRSLSGTK--ISGLDWSVDSKN 235
++ ++T+P D++ GS ++ +LV + ++ R L+G +S S DS
Sbjct: 18 VTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSFDSHY 77
Query: 236 IFVCTHDGRIVIYD--SGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKT---WILI 290
+ D I ++D G+ T + + +D V P N + S S DKT W +I
Sbjct: 78 ALSASWDKTIRLWDLEKGECTHQFVGHTSDV--LSVSISPDNRQVVSGSRDKTIKIWNII 135
Query: 291 DTVKQAPILIQEGHSAEVFSLSF--HNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSK 348
K + GHS V + F + D +AG D +WD+ + S GH+
Sbjct: 136 GNCKYT--ITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTG 193
Query: 349 PIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSI 391
+ +V S +G ASG DGT+ +WD+ + ++ ++ A +I
Sbjct: 194 YVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKANI 236
>Hs5803221 [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 943
Score = 63.2 bits (152), Expect = 8e-10
Identities = 50/240 (20%), Positives = 110/240 (45%), Gaps = 20/240 (8%)
Query: 234 KNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILID-- 291
+ + + T G++ +YD ++ + +D + P + DK+ D
Sbjct: 467 RQVVIGTKTGKLQLYDLASGNLLETIDAHDGALWSMSLSPDQRGFVTGGADKSVKFWDFE 526
Query: 292 ------------TVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKN 339
+VKQ L + +V +S+ + L++ + LD I+ + + K
Sbjct: 527 LVKDENSTQKRLSVKQTRTLQLD---EDVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKF 583
Query: 340 IMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNK 399
+SL GH P+ +D S +G +A+GS D +K+W + +++ AH+ V ++F
Sbjct: 584 FLSLYGHKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVP 643
Query: 400 QNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKV--MSIDIVGPDIYSAGWDRSVNKW 457
++ + ++G D K+ ++ + ++LEGH ++ +++ G + S+ D+S+ W
Sbjct: 644 KSHLFF-TAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLW 702
Score = 60.5 bits (145), Expect = 5e-09
Identities = 44/171 (25%), Positives = 79/171 (45%), Gaps = 3/171 (1%)
Query: 291 DTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPI 350
D K ILI +G EV L DG ++ D I+ + SG+ ++ GH I
Sbjct: 51 DLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAI 110
Query: 351 YSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGY 410
++ + Q G +LASGS D I VWD+ + + + H ++Q F ++ LV+SG
Sbjct: 111 TTLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREK-NLLVTSGK 169
Query: 411 DKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPD--IYSAGWDRSVNKWGV 459
D V ++ +++ GH +V + ++ + + + D + W +
Sbjct: 170 DTMVKWWDLDTQHCFKTMVGHRTEVWGLVLLSEEKRLITGASDSELRVWDI 220
Score = 53.5 bits (127), Expect = 6e-07
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 331 IWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRK-KGNVETILAHN 389
IWD+R G+ I+ LQG + + + S +G LA G DG+I+++ + +GNV T H
Sbjct: 49 IWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNV-TFNGHK 107
Query: 390 SIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKV 435
+ ++ +K++ Q GG L S D + +++ N L+GH D +
Sbjct: 108 AAITTLKYD-QLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAI 152
>Hs18677720 [R] KOG0266 WD40 repeat-containing protein
Length = 421
Score = 63.2 bits (152), Expect = 8e-10
Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 7/150 (4%)
Query: 313 FHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNG-YQLASGSGDGTI 371
F D L++T + IWD+ +GK +++L H++ + + ++ +G L S S D T+
Sbjct: 136 FGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTL 195
Query: 372 KVWDIRKKGNVETIL-AHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEG 430
+VWD++ GN+ +L H + V F+ + L S G K V ++N + R LEG
Sbjct: 196 RVWDLKDDGNMMKVLRGHQNWVYSCAFS-PDSSMLCSVGASKAVFLWNMDKYTMIRKLEG 254
Query: 431 HLDKVMSIDIVGPD---IYSAGWDRSVNKW 457
H V++ D PD + +A +D V W
Sbjct: 255 HHHDVVACDF-SPDGALLATASYDTRVYIW 283
Score = 56.2 bits (134), Expect = 1e-07
Identities = 53/215 (24%), Positives = 89/215 (40%), Gaps = 17/215 (7%)
Query: 193 LMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFV-CTHDGRIVIYDSG 251
L+A G +G + + D K+ N + L ++ D I V + D + ++D
Sbjct: 142 LLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLK 201
Query: 252 DE-TTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFS 310
D+ +K+L + P +S + S K L + K I EGH +V +
Sbjct: 202 DDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVA 261
Query: 311 LSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKP--------------IYSVDWS 356
F DG+L++TA D IWD +G +M GH P + SV +S
Sbjct: 262 CDFSPDGALLATASYDTRVYIWDPHNGDILMEF-GHLFPPPTPIFAGGANDRWVRSVSFS 320
Query: 357 QNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSI 391
+G +AS + D ++ W I + V+ N +
Sbjct: 321 HDGLHVASLADDKMVRFWRIDEDYPVQVAPLSNGL 355
>ECU07g0750 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 384
Score = 63.2 bits (152), Expect = 8e-10
Identities = 46/165 (27%), Positives = 86/165 (51%), Gaps = 10/165 (6%)
Query: 226 GLDWS-VDSKNIFVCTHDGRIVIYDSGDETT----VKILYKNDARFAQVRCHPCNSFIGS 280
GL W+ ++ + C G + ++D E++ +L +++ + + S
Sbjct: 163 GLSWNHLNPGELAGCGEGGEVCVFDVSQESSSISPTVVLRRHETAVNDCAFSFFDKKLLS 222
Query: 281 TSFDKTWILI-DTVKQAPI-LIQEGHSAEVFSLSFHN-DGSLVSTAGLDAIALIWDIRS- 336
++ D +++ DT + I I+E H++++ S+ F DG++++T+ D +WD RS
Sbjct: 223 SAGDGGMVVLWDTRSEDCIHAIEEAHTSDILSVRFSPLDGNVIATSSCDGSVKVWDRRSL 282
Query: 337 GKNIMSLQGHSKPIYSVDWS-QNGYQLASGSGDGTIKVWDIRKKG 380
+ + L GHSK + SV+WS N LASGS D + VWD+ + G
Sbjct: 283 SQPLHILLGHSKDVVSVEWSPHNDKVLASGSTDRRVIVWDLGQAG 327
Score = 57.8 bits (138), Expect = 3e-08
Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 296 APILIQEGHSAEVFSLSFHN-DGSLVSTAGLDAIALIWDIRSGKNIMSLQ-GHSKPIYSV 353
+P ++ H V +F D L+S+AG + ++WD RS I +++ H+ I SV
Sbjct: 196 SPTVVLRRHETAVNDCAFSFFDKKLLSSAGDGGMVVLWDTRSEDCIHAIEEAHTSDILSV 255
Query: 354 DWSQ-NGYQLASGSGDGTIKVWDIRKKGN-VETILAHNSIVSQVKFNKQNGGYLVSSGYD 411
+S +G +A+ S DG++KVWD R + +L H+ V V+++ N L S D
Sbjct: 256 RFSPLDGNVIATSSCDGSVKVWDRRSLSQPLHILLGHSKDVVSVEWSPHNDKVLASGSTD 315
Query: 412 KKVNIFNDG 420
++V +++ G
Sbjct: 316 RRVIVWDLG 324
>At2g47990 [S] KOG0310 Conserved WD40 repeat-containing protein
Length = 530
Score = 63.2 bits (152), Expect = 8e-10
Identities = 36/123 (29%), Positives = 58/123 (46%), Gaps = 5/123 (4%)
Query: 308 VFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWS-QNGYQLASGS 366
V S+ F +DG+L + L + ++DI+ + +L+ HS P V + Q+ L SG
Sbjct: 96 VSSVCFRSDGALFAACDLSGVVQVFDIKERMALRTLRSHSAPARFVKYPVQDKLHLVSGG 155
Query: 367 GDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIF----NDGNW 422
DG +K WD+ + +L H V + N LV+ YD V ++ + NW
Sbjct: 156 DDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDARVHTSNW 215
Query: 423 IKE 425
I E
Sbjct: 216 IAE 218
>SPAC821.08c [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 488
Score = 62.8 bits (151), Expect = 1e-09
Identities = 51/197 (25%), Positives = 87/197 (43%), Gaps = 10/197 (5%)
Query: 227 LDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDAR--FAQVRCHPCNSFIGSTSFD 284
LDWS + N+ + + ++++ D +V L + D A V+ SF+ +
Sbjct: 186 LDWS--NLNVVAVALERNVYVWNA-DSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN 242
Query: 285 KTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIR-SGKNIMSL 343
+ D Q + GH A V LS++ ++S+ D+R + I +L
Sbjct: 243 GLVDIYDVESQTKLRTMAGHQARVGCLSWNRH--VLSSGSRSGAIHHHDVRIANHQIGTL 300
Query: 344 QGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGG 403
QGHS + + W +G QLASG D +++WD R T HN+ V V +
Sbjct: 301 QGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSN 360
Query: 404 YLVSSG--YDKKVNIFN 418
L + G DK+++ +N
Sbjct: 361 LLATGGGTMDKQIHFWN 377
Score = 62.4 bits (150), Expect = 1e-09
Identities = 59/249 (23%), Positives = 111/249 (43%), Gaps = 16/249 (6%)
Query: 222 TKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGST 281
T ++ + WS D + V +G + IYD +T ++ + + AR V C N + S+
Sbjct: 222 TYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQAR---VGCLSWNRHVLSS 278
Query: 282 SFDKTWILIDTVKQA--PILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKN 339
I V+ A I +GHS+EV L++ +DG +++ G D + IWD RS
Sbjct: 279 GSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIP 338
Query: 340 IMSLQGHSKPIYSV---DWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVK 396
+ H+ + +V W N G+ D I W+ V T+ A + + S +
Sbjct: 339 KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLI- 397
Query: 397 FNKQNGGYLVSSGY-DKKVNI--FNDGNWIKERSLEGHLDKVMSIDIVGPD---IYSAGW 450
++ + + + G+ D ++I ++ K+ + H +V+ + PD + +A
Sbjct: 398 WSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVL-YSALSPDGRILSTAAS 456
Query: 451 DRSVNKWGV 459
D ++ W V
Sbjct: 457 DENLKFWRV 465
>Hs4759276 [A] KOG0299 U3 snoRNP-associated protein (contains WD40 repeats)
Length = 475
Score = 62.8 bits (151), Expect = 1e-09
Identities = 40/161 (24%), Positives = 78/161 (47%), Gaps = 9/161 (5%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GHS+ V ++ +DG +++ + LIW+ +S +++ + GH + + + + +QL
Sbjct: 197 GHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRRGTHQL 256
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNW 422
S S D ++KVW++ + VET+ H V+ + + + + G D V ++
Sbjct: 257 YSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRE-CCVTAGGRDGTVRVWK---- 311
Query: 423 IKERS---LEGHLDKVMSIDIVGPD-IYSAGWDRSVNKWGV 459
I E S GH + I ++ + + S D SV WG+
Sbjct: 312 IPEESQLVFYGHQGSIDCIHLINEEHMVSGADDGSVALWGL 352
Score = 62.8 bits (151), Expect = 1e-09
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 14/183 (7%)
Query: 290 IDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSL------ 343
I A I + GH + L D S + +A D + W + SG+ + +
Sbjct: 131 IQAPASADIRVLRGHQLSITCLVVTPDDSAIFSAAKDCSIIKWSVESGRKLHVIPRAKKG 190
Query: 344 -----QGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFN 398
GHS + + S +G LASG I +W+ + ++ T H VS + F
Sbjct: 191 AEGKPPGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAF- 249
Query: 399 KQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPD--IYSAGWDRSVNK 456
++ L S+ +D+ V ++N +L GH D V ++D + + + + G D +V
Sbjct: 250 RRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVTAGGRDGTVRV 309
Query: 457 WGV 459
W +
Sbjct: 310 WKI 312
>Hs4502477 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 569
Score = 62.8 bits (151), Expect = 1e-09
Identities = 55/244 (22%), Positives = 105/244 (42%), Gaps = 29/244 (11%)
Query: 235 NIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPC---------NSFIGSTSFDK 285
++ +D R++I S D +TV++ N H C N + + S D+
Sbjct: 309 SVLCLQYDERVIITGSSD-STVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDR 367
Query: 286 TWILIDTVKQAPILIQE---GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMS 342
+ + D I ++ GH A V + F +D +VS +G D +W+ + + + +
Sbjct: 368 SIAVWDMASPTDITLRRVLVGHRAAVNVVDF-DDKYIVSASG-DRTIKVWNTSTCEFVRT 425
Query: 343 LQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNG 402
L GH + I + + + SGS D TI++WDI + + H +V ++F+ +
Sbjct: 426 LNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR- 482
Query: 403 GYLVSSGYDKKVNIFN---------DGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRS 453
+VS YD K+ +++ + R+L H +V + I S+ D +
Sbjct: 483 --IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDT 540
Query: 454 VNKW 457
+ W
Sbjct: 541 ILIW 544
Score = 57.8 bits (138), Expect = 3e-08
Identities = 36/163 (22%), Positives = 76/163 (46%), Gaps = 10/163 (6%)
Query: 300 IQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNG 359
I GH+ V L + D ++ T D+ +WD+ +G+ + +L H + + + + N
Sbjct: 302 ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRF--NN 357
Query: 360 YQLASGSGDGTIKVWDIRKKGNV---ETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNI 416
+ + S D +I VWD+ ++ ++ H + V+ V F+ + Y+VS+ D+ + +
Sbjct: 358 GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKV 414
Query: 417 FNDGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRSVNKWGV 459
+N R+L GH + + + S D ++ W +
Sbjct: 415 WNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI 457
Score = 55.1 bits (131), Expect = 2e-07
Identities = 63/254 (24%), Positives = 103/254 (39%), Gaps = 17/254 (6%)
Query: 208 NSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFA 267
+SL +I+C RS + + L + D + I D I I+D +IL
Sbjct: 255 HSLQRIHC-RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRIL---TGHTG 308
Query: 268 QVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAE-VFSLSFHNDGSLVSTAGLD 326
V C + + T + + + V +L H E V L F+N ++ T D
Sbjct: 309 SVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKD 366
Query: 327 AIALIWDIRSGKNIMS---LQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVE 383
+WD+ S +I L GH + VD+ + S SGD TIKVW+ V
Sbjct: 367 RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWNTSTCEFVR 424
Query: 384 TILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGP 443
T+ H ++ +++ + +VS D + +++ R LEGH + V I
Sbjct: 425 TLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 481
Query: 444 DIYSAGWDRSVNKW 457
I S +D + W
Sbjct: 482 RIVSGAYDGKIKVW 495
>Hs16117783 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 605
Score = 62.8 bits (151), Expect = 1e-09
Identities = 55/244 (22%), Positives = 105/244 (42%), Gaps = 29/244 (11%)
Query: 235 NIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPC---------NSFIGSTSFDK 285
++ +D R++I S D +TV++ N H C N + + S D+
Sbjct: 345 SVLCLQYDERVIITGSSD-STVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDR 403
Query: 286 TWILIDTVKQAPILIQE---GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMS 342
+ + D I ++ GH A V + F +D +VS +G D +W+ + + + +
Sbjct: 404 SIAVWDMASPTDITLRRVLVGHRAAVNVVDF-DDKYIVSASG-DRTIKVWNTSTCEFVRT 461
Query: 343 LQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNG 402
L GH + I + + + SGS D TI++WDI + + H +V ++F+ +
Sbjct: 462 LNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR- 518
Query: 403 GYLVSSGYDKKVNIFN---------DGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRS 453
+VS YD K+ +++ + R+L H +V + I S+ D +
Sbjct: 519 --IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDT 576
Query: 454 VNKW 457
+ W
Sbjct: 577 ILIW 580
Score = 57.8 bits (138), Expect = 3e-08
Identities = 36/163 (22%), Positives = 76/163 (46%), Gaps = 10/163 (6%)
Query: 300 IQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNG 359
I GH+ V L + D ++ T D+ +WD+ +G+ + +L H + + + + N
Sbjct: 338 ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRF--NN 393
Query: 360 YQLASGSGDGTIKVWDIRKKGNV---ETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNI 416
+ + S D +I VWD+ ++ ++ H + V+ V F+ + Y+VS+ D+ + +
Sbjct: 394 GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKV 450
Query: 417 FNDGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRSVNKWGV 459
+N R+L GH + + + S D ++ W +
Sbjct: 451 WNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI 493
Score = 55.1 bits (131), Expect = 2e-07
Identities = 63/254 (24%), Positives = 103/254 (39%), Gaps = 17/254 (6%)
Query: 208 NSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFA 267
+SL +I+C RS + + L + D + I D I I+D +IL
Sbjct: 291 HSLQRIHC-RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRIL---TGHTG 344
Query: 268 QVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAE-VFSLSFHNDGSLVSTAGLD 326
V C + + T + + + V +L H E V L F+N ++ T D
Sbjct: 345 SVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKD 402
Query: 327 AIALIWDIRSGKNIMS---LQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVE 383
+WD+ S +I L GH + VD+ + S SGD TIKVW+ V
Sbjct: 403 RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWNTSTCEFVR 460
Query: 384 TILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGP 443
T+ H ++ +++ + +VS D + +++ R LEGH + V I
Sbjct: 461 TLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 517
Query: 444 DIYSAGWDRSVNKW 457
I S +D + W
Sbjct: 518 RIVSGAYDGKIKVW 531
>At2g01330 [Z] KOG0318 WD40 repeat stress protein/actin interacting protein
Length = 611
Score = 62.8 bits (151), Expect = 1e-09
Identities = 74/319 (23%), Positives = 132/319 (41%), Gaps = 44/319 (13%)
Query: 171 LKGMQVIDEK--PISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCN--RSLSGTKISG 226
L+ +QV E ++ SP G+ +A SG + + + N R L+G ++
Sbjct: 47 LQDVQVYGEHGYAVTVARYSPNGEWIASADVSGTVRVWGTHNGFVLKNEFRVLAG-RVDD 105
Query: 227 LDWSVDSKNIFVCTHDG------RIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGS 280
L WS D I V + DG R +DSG+ T+ + R P F +
Sbjct: 106 LQWSFDGLRI-VASGDGKGKSLVRSFAWDSGN--TMGDFDGHSRRVLSCAFKPTRPFRIA 162
Query: 281 TSFDKTWILIDTVKQAPILIQEGH---SAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSG 337
T + L++ P H S V + + DG+ T D +I+D ++G
Sbjct: 163 TCGED--FLVNFYDGPPFKFHSSHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTG 220
Query: 338 KNIMSL---QGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQ 394
+ L GH IY+V WS + ++ + S D + KVW++ + G + S++
Sbjct: 221 DKVGELASEDGHKGSIYAVSWSPDSKRVLTVSADKSAKVWEVAEDGTI------GSVIKT 274
Query: 395 VKFNKQNGG------------YLVSSGYDKKVNIFNDGNWIK-ERSLEGHLDKVMSIDIV 441
+ F + G +L++ +++F+ + K L GH+ V S+ ++
Sbjct: 275 LSFMESGGAEDMLVGCLWQNDHLITVSLGGTMSLFSADDMDKPPLLLSGHIKNVTSLAVL 334
Query: 442 GPD---IYSAGWDRSVNKW 457
G + I S +D + KW
Sbjct: 335 GENQKTILSCSYDGLIVKW 353
>SPBC3D6.12 [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 922
Score = 62.4 bits (150), Expect = 1e-09
Identities = 56/285 (19%), Positives = 117/285 (40%), Gaps = 19/285 (6%)
Query: 188 SPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVI 247
S D++ G+ +G+L L + + C R++ + + + K I G + +
Sbjct: 405 SANHDVILSGA-NGSLKLWNKKTTS--CIRTIECGYVLAASFINNDKCIVSAYKSGELEV 461
Query: 248 YDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKT---WILIDTVKQAPILIQE-- 302
YD + ++ + +D + ++ + S D T W L + P ++
Sbjct: 462 YDIASSSLIERIQAHDGAIWDLAVGHDGTYFATASADHTVKLWSLKSSFDFVPGTTRKVT 521
Query: 303 ----------GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYS 352
+ +V ++ DG V+ + LD ++ + S K ++L GH P+ S
Sbjct: 522 TLKLEQTRQIDFTDDVLAVKISPDGRFVAASLLDNTVKVYYLDSLKFFLNLYGHKLPVLS 581
Query: 353 VDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDK 412
+D S + L + S D +K+W + ++I AH + +V F + S D+
Sbjct: 582 MDISYDSKLLVTCSADKNVKIWGLDFGDCHKSIFAHQDSIMEVTFQPDTYNFFTCS-KDR 640
Query: 413 KVNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRSVNKW 457
+V ++ ++ L GH +V ++ + + S D S+ W
Sbjct: 641 EVRYWDGKSFDLILKLRGHHSEVWALAVGPTFVVSGSHDHSIRLW 685
>Hs4505895 [A] KOG0285 Pleiotropic regulator 1
Length = 514
Score = 62.4 bits (150), Expect = 1e-09
Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 2/149 (1%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH + V+ L H ++ T D+ A IWD+R+ ++ +L GH+ + +V Q+
Sbjct: 286 GHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQI 345
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNW 422
+GS D TI++WD+ T+ H V V + ++ + S + K F DG++
Sbjct: 346 ITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIKQWKFPDGSF 405
Query: 423 IKERSLEGHLDKVMSIDIVGPDIYSAGWD 451
I ++L GH + ++ + + +G D
Sbjct: 406 I--QNLSGHNAIINTLTVNSDGVLVSGAD 432
Score = 56.6 bits (135), Expect = 8e-08
Identities = 44/194 (22%), Positives = 82/194 (41%), Gaps = 7/194 (3%)
Query: 269 VRC---HPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGL 325
VRC P N + + S D+T + D L GH + V + + + G
Sbjct: 207 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE 266
Query: 326 DAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETI 385
D WD+ K I GH +Y +D L + S D T ++WD+R K +V T+
Sbjct: 267 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTL 326
Query: 386 LAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPDI 445
H + V+ V+ +++ +D + +++ +L H V ++ ++ P
Sbjct: 327 SGHTNAVATVRCQAAE-PQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAV-VLHPRH 384
Query: 446 Y--SAGWDRSVNKW 457
Y ++G ++ +W
Sbjct: 385 YTFASGSPDNIKQW 398
Score = 51.2 bits (121), Expect = 3e-06
Identities = 50/212 (23%), Positives = 87/212 (40%), Gaps = 11/212 (5%)
Query: 224 ISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSF 283
+ GLD + C+ D I+D + +V L + A VRC I + S
Sbjct: 291 VYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSH 350
Query: 284 DKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSL 343
D T L D V + H V ++ H ++ D I W G I +L
Sbjct: 351 DTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIKQ-WKFPDGSFIQNL 409
Query: 344 QGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETI--------LAHNSIVSQV 395
GH+ I ++ + +G L SG+ +GT+ +WD R N + + L S +
Sbjct: 410 SGHNAIINTLTVNSDGV-LVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFAC 468
Query: 396 KFNKQNGGYLVSSGYDKKVNIFNDGNWIKERS 427
F+ Q+ L+++ DK + ++ + + E +
Sbjct: 469 AFD-QSESRLLTAEADKTIKVYREDDTATEET 499
>CE27127 [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 929
Score = 62.4 bits (150), Expect = 1e-09
Identities = 84/422 (19%), Positives = 178/422 (41%), Gaps = 47/422 (11%)
Query: 69 DRLSDL--ILSDPKARERVTRLVESTSKDQTKIDTERSKVDDEDEE---FYTPASQQLI- 122
D+++D+ + S+ ++ +R+T+ ++S + T DT DD ++ T + ++
Sbjct: 291 DKVADVYRVFSETESAKRLTKKLKSAKRKATS-DTTTVNEDDVAKDVTILVTRIGEMVLP 349
Query: 123 -EMRKFLIIYSMQRSKXXXXXXXXXXVSQNVKNVISKRRDLESKLKQFSLKGMQVIDE-- 179
+++ ++ S++ ++ ++ N + + + +E+ + +D+
Sbjct: 350 HKIKWIDVVRSVKTNENTLIYKWYALLTDNTVHWV--KMSIETTSNSVECDSVGNLDKLG 407
Query: 180 --KPISEINTSPGGDLMACGS------WS-----GNLSLVDNSLSKIYCNRSLSGTKISG 226
+ + + S L+A G WS +L+L DN + I + G
Sbjct: 408 HREDVRALCVSSSSSLLASGGGNEVIVWSTHSLRSSLTLTDNDIKDIVAVNFVPGDNY-- 465
Query: 227 LDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKT 286
I +G I +++ V+ + ++ P N + S DKT
Sbjct: 466 ---------ILTGGKNGEIGVFELSSAELVETRKAHTGAIWTIQNSPDNEGFITASADKT 516
Query: 287 -----WILIDTVKQAPILIQEGHSAEV----FSLSFHNDGSLVSTAGLDAIALIWDIRSG 337
++L+ + I I+E E+ + SF DG + A L+ ++ + +
Sbjct: 517 VRFWSFVLVTEGSRKRISIKEQKVLELPDEALAASFSADGKFLVVALLNNTCSVYFVNTL 576
Query: 338 KNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKF 397
K +SL GHS P+ VD + + +GS D ++KVW + ++ AH+ V+ V F
Sbjct: 577 KFFVSLYGHSLPVTCVDIAPSSKLCVTGSVDKSVKVWGLDFGDCHKSFHAHDDAVTSVLF 636
Query: 398 NKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGH-LD-KVMSIDIVGPDIYSAGWDRSVN 455
S+G D K+ ++ +I + L+ H LD + ++ G ++SA D+S+
Sbjct: 637 CPGEEQLFWSAGKDGKIKQWDAVKFIMVQVLDRHTLDIRCLAQFTNGSVMFSASHDKSIR 696
Query: 456 KW 457
W
Sbjct: 697 CW 698
Score = 53.5 bits (127), Expect = 6e-07
Identities = 29/98 (29%), Positives = 49/98 (49%), Gaps = 2/98 (2%)
Query: 297 PILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWS 356
PI+ GH V + F +DG L +T G D + ++WDI + + + L GH + + + +
Sbjct: 96 PIMFS-GHKKAVNCIEFSSDGLLFATGGKDGVIVLWDILAERGMFRLHGHKESVTQMKFV 154
Query: 357 QNGYQLASGSGDGTIKVWDIRKKGNVETIL-AHNSIVS 393
+ + S S D IK W I + T++ + N I S
Sbjct: 155 RGDRFIISTSKDSLIKFWSIASQSCFYTVMDSRNEIYS 192
>At2g16780 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 415
Score = 62.4 bits (150), Expect = 1e-09
Identities = 39/139 (28%), Positives = 77/139 (55%), Gaps = 4/139 (2%)
Query: 298 ILIQEGHSAEVFSLSFH-NDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWS 356
+ + EGH + + +S+H + +L +AG D +IWD R+ + ++ H + + + ++
Sbjct: 210 MFVYEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFN 269
Query: 357 Q-NGYQLASGSGDGTIKVWDIRK-KGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKV 414
N + LA+ S D T+ ++D+RK + + +H V QV+++ + L SSG D+++
Sbjct: 270 PFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRL 329
Query: 415 NIFNDGNWIKERSLEGHLD 433
++ D N + E LE LD
Sbjct: 330 MVW-DLNRVGEEQLEIELD 347
>At1g71840 [S] KOG0296 Angio-associated migratory cell protein (contains WD40
repeats)
Length = 390
Score = 62.4 bits (150), Expect = 1e-09
Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 8/227 (3%)
Query: 224 ISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSF 283
+S L +S D + + DG + I+D+ T +L A VR HP + + S
Sbjct: 107 VSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSE 166
Query: 284 DKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSL 343
D + + + K+A + + GH+ V F DG L+ T DA ++W+ ++
Sbjct: 167 DCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCHPY--- 223
Query: 344 QGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNG- 402
H++ + +D + N SGS DG++ + +I V ++ +H V VKF+ +
Sbjct: 224 --HTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSAT 281
Query: 403 -GYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIYSA 448
+ G DKK+ I+ D R + H + V S+ +G Y A
Sbjct: 282 IPLAATGGMDKKLIIW-DLQHSTPRFICEHEEGVTSLTWIGTSKYLA 327
Score = 54.7 bits (130), Expect = 3e-07
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH V L+F DG L+++ GLD + I+D SG L G I V W G+ +
Sbjct: 102 GHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIV 161
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYD 411
+GS D ++ +W+ K+ + HN V+ F G L+ +G D
Sbjct: 162 LAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPD--GKLICTGSD 208
Score = 50.4 bits (119), Expect = 5e-06
Identities = 28/85 (32%), Positives = 47/85 (54%), Gaps = 2/85 (2%)
Query: 303 GHSAEVFSLSFH-NDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
GH E+++L+ D +LV+T G D A +W I +G L GH + + +S +G
Sbjct: 59 GHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQL 118
Query: 362 LASGSGDGTIKVWDIRKKGNVETIL 386
LASG DG ++++D G ++ +L
Sbjct: 119 LASGGLDGVVQIFD-ASSGTLKCVL 142
>SPAC57A10.05c [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 605
Score = 62.0 bits (149), Expect = 2e-09
Identities = 44/184 (23%), Positives = 82/184 (43%), Gaps = 6/184 (3%)
Query: 276 SFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIR 335
+ + S S+D T L + + + EGHS+ V L F D + + +D IW+ R
Sbjct: 284 NILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF--DQCKLISGSMDKTIRIWNYR 341
Query: 336 SGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQV 395
+ + I L GH+ + + + L SGS D T+K+W G T+ H V+ V
Sbjct: 342 TSECISILHGHTDSVLCLTFDST--LLVSGSADCTVKLWHF-SGGKRITLRGHTGPVNSV 398
Query: 396 KFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRSVN 455
+ + G ++S D + I++ + H+ V S+ + ++S D ++
Sbjct: 399 RIIRDR-GLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSRLFSCSLDGTIK 457
Query: 456 KWGV 459
+W +
Sbjct: 458 QWDI 461
Score = 58.2 bits (139), Expect = 3e-08
Identities = 54/218 (24%), Positives = 90/218 (40%), Gaps = 8/218 (3%)
Query: 240 THDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPIL 299
++D I +++ V +L + + ++ C GS DKT + + I
Sbjct: 290 SYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCKLISGS--MDKTIRIWNYRTSECIS 347
Query: 300 IQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNG 359
I GH+ V L+F D +L+ + D +W GK I +L+GH+ P+ SV ++
Sbjct: 348 ILHGHTDSVLCLTF--DSTLLVSGSADCTVKLWHFSGGKRI-TLRGHTGPVNSVRIIRDR 404
Query: 360 YQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFND 419
+ SGS D TIK+W + + T AH V + L S D + ++
Sbjct: 405 GLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSR---LFSCSLDGTIKQWDI 461
Query: 420 GNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRSVNKW 457
+L GH++ V I + S D V W
Sbjct: 462 EKKKCVHTLFGHIEGVWEIAADHLRLISGAHDGVVKVW 499
Score = 52.0 bits (123), Expect = 2e-06
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 20/161 (12%)
Query: 311 LSFHNDG--------SLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
LS H+DG +++++ DA +W++ + + + L+GHS + + + Q +L
Sbjct: 269 LSGHSDGVMCLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQ--CKL 326
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNI--FNDG 420
SGS D TI++W+ R + + H V + F+ LVS D V + F+ G
Sbjct: 327 ISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDST---LLVSGSADCTVKLWHFSGG 383
Query: 421 NWIKERSLEGHLDKVMSIDIVGPD--IYSAGWDRSVNKWGV 459
K +L GH V S+ I+ + S D ++ W +
Sbjct: 384 ---KRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSL 421
>7300980 [R] KOG4155 FOG: WD40 repeat
Length = 743
Score = 62.0 bits (149), Expect = 2e-09
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 269 VRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAI 328
V HP ++I + S D + L + + V L+F DG +++ AG +
Sbjct: 587 VAFHPNGNYIATGSADHSVRLWCATSGKLMRVFADCRQAVTQLAFSPDGKMLAAAGEETK 646
Query: 329 ALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAH 388
I+D+ +G + L+ HS I S+ WS + LA+ DGT+++WDI+K + ++
Sbjct: 647 VRIFDLAAGAQLAELKDHSASISSLSWSTHNRHLATACSDGTLRLWDIKKL----SPMSD 702
Query: 389 NSIVSQVKFNKQNGGYLVSSGYDKKVNIF 417
NS N V+S + V++F
Sbjct: 703 NSSAGSSSSATTNRVLTVNSSCQRLVDVF 731
Score = 50.8 bits (120), Expect = 4e-06
Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 1/139 (0%)
Query: 300 IQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNG 359
I H+ ++ L G V T D A +W + ++ GH++ + V + NG
Sbjct: 534 IYRSHNYPIWCLDESPVGQYVVTGSKDLSARLWSLEKEHALIIYAGHTQDVECVAFHPNG 593
Query: 360 YQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFND 419
+A+GS D ++++W + V+Q+ F+ +G L ++G + KV IF+
Sbjct: 594 NYIATGSADHSVRLWCATSGKLMRVFADCRQAVTQLAFS-PDGKMLAAAGEETKVRIFDL 652
Query: 420 GNWIKERSLEGHLDKVMSI 438
+ L+ H + S+
Sbjct: 653 AAGAQLAELKDHSASISSL 671
>Hs16445438 [R] KOG0644 Uncharacterized conserved protein contains WD40 repeat
and BROMO domains
Length = 2269
Score = 61.6 bits (148), Expect = 2e-09
Identities = 33/115 (28%), Positives = 58/115 (49%), Gaps = 3/115 (2%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH + V+ ++F G + T D + IW +G+ + +L+GHS I + + +
Sbjct: 184 GHLSAVYCVAFDRTGHRIFTGSDDCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTMI 243
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGG---YLVSSGYDKKV 414
A+GS D I+VW +R V + H ++ ++F+ G Y+VS+G D V
Sbjct: 244 AAGSCDKIIRVWCLRTCAPVAVLQGHTGSITSLQFSPMAKGSQRYMVSTGADGTV 298
>Hs16445436 [R] KOG0644 Uncharacterized conserved protein contains WD40 repeat
and BROMO domains
Length = 2320
Score = 61.6 bits (148), Expect = 2e-09
Identities = 33/115 (28%), Positives = 58/115 (49%), Gaps = 3/115 (2%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH + V+ ++F G + T D + IW +G+ + +L+GHS I + + +
Sbjct: 184 GHLSAVYCVAFDRTGHRIFTGSDDCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTMI 243
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGG---YLVSSGYDKKV 414
A+GS D I+VW +R V + H ++ ++F+ G Y+VS+G D V
Sbjct: 244 AAGSCDKIIRVWCLRTCAPVAVLQGHTGSITSLQFSPMAKGSQRYMVSTGADGTV 298
>Hs16306498 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 508
Score = 61.6 bits (148), Expect = 2e-09
Identities = 60/270 (22%), Positives = 116/270 (42%), Gaps = 26/270 (9%)
Query: 205 LVDNSL-----SKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKIL 259
L DNS+ + + C + L+G S L D + I + D + ++D + L
Sbjct: 223 LRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL 282
Query: 260 YKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQE---GHSAEVFSLSFHND 316
++ +R N + + S D++ + D I ++ GH A V + F +D
Sbjct: 283 IHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF-DD 339
Query: 317 GSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDI 376
+VS +G D +W + + + +L GH + I + + + SGS D TI++WDI
Sbjct: 340 KYIVSASG-DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDI 396
Query: 377 RKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN---------DGNWIKERS 427
+ + H +V ++F+ + +VS YD K+ +++ + + R+
Sbjct: 397 ECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRAPASTLCLRT 453
Query: 428 LEGHLDKVMSIDIVGPDIYSAGWDRSVNKW 457
L H +V + I S+ D ++ W
Sbjct: 454 LVEHSGRVFRLQFDEFQIISSSHDDTILIW 483
Score = 56.6 bits (135), Expect = 8e-08
Identities = 40/157 (25%), Positives = 77/157 (48%), Gaps = 10/157 (6%)
Query: 304 HSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLA 363
+S V+ L + +D ++S ++I IWD S + + L GH+ + + + + +
Sbjct: 205 NSKGVYCLQY-DDEKIISGLRDNSIK-IWDKTSLECLKVLTGHTGSVLCLQYDER--VIV 260
Query: 364 SGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWI 423
+GS D T++VWD+ + T++ HN V ++F + G +V+ D+ + +++ +
Sbjct: 261 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRF---SNGLMVTCSKDRSIAVWDMASAT 317
Query: 424 K---ERSLEGHLDKVMSIDIVGPDIYSAGWDRSVNKW 457
R L GH V +D I SA DR++ W
Sbjct: 318 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW 354
Score = 56.2 bits (134), Expect = 1e-07
Identities = 36/160 (22%), Positives = 77/160 (47%), Gaps = 10/160 (6%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH+ V L + D ++ T D+ +WD+ +G+ + +L H++ + + +S NG +
Sbjct: 244 GHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLMV 300
Query: 363 ASGSGDGTIKVWDIRKKGNV---ETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFND 419
S D +I VWD+ ++ ++ H + V+ V F+ + Y+VS+ D+ + +++
Sbjct: 301 TC-SKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWST 356
Query: 420 GNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRSVNKWGV 459
R+L GH + + + S D ++ W +
Sbjct: 357 STCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI 396
Score = 55.1 bits (131), Expect = 2e-07
Identities = 63/254 (24%), Positives = 101/254 (38%), Gaps = 17/254 (6%)
Query: 208 NSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFA 267
++L +I C RS + + L + D + I D I I+D +K+L
Sbjct: 194 HNLQRIQC-RSENSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVL---TGHTG 247
Query: 268 QVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAE-VFSLSFHNDGSLVSTAGLD 326
V C + + T + + + V +L H E V L F N L+ T D
Sbjct: 248 SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN--GLMVTCSKD 305
Query: 327 AIALIWDIRSGKNIMS---LQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVE 383
+WD+ S +I L GH + VD+ + S SGD TIKVW V
Sbjct: 306 RSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVR 363
Query: 384 TILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGP 443
T+ H ++ +++ + +VS D + +++ R LEGH + V I
Sbjct: 364 TLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 420
Query: 444 DIYSAGWDRSVNKW 457
I S +D + W
Sbjct: 421 RIVSGAYDGKIKVW 434
>Hs16306496 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 529
Score = 61.6 bits (148), Expect = 2e-09
Identities = 60/270 (22%), Positives = 116/270 (42%), Gaps = 26/270 (9%)
Query: 205 LVDNSL-----SKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKIL 259
L DNS+ + + C + L+G S L D + I + D + ++D + L
Sbjct: 244 LRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL 303
Query: 260 YKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQE---GHSAEVFSLSFHND 316
++ +R N + + S D++ + D I ++ GH A V + F +D
Sbjct: 304 IHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF-DD 360
Query: 317 GSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDI 376
+VS +G D +W + + + +L GH + I + + + SGS D TI++WDI
Sbjct: 361 KYIVSASG-DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDI 417
Query: 377 RKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN---------DGNWIKERS 427
+ + H +V ++F+ + +VS YD K+ +++ + + R+
Sbjct: 418 ECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRAPASTLCLRT 474
Query: 428 LEGHLDKVMSIDIVGPDIYSAGWDRSVNKW 457
L H +V + I S+ D ++ W
Sbjct: 475 LVEHSGRVFRLQFDEFQIISSSHDDTILIW 504
Score = 56.6 bits (135), Expect = 8e-08
Identities = 40/157 (25%), Positives = 77/157 (48%), Gaps = 10/157 (6%)
Query: 304 HSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLA 363
+S V+ L + +D ++S ++I IWD S + + L GH+ + + + + +
Sbjct: 226 NSKGVYCLQY-DDEKIISGLRDNSIK-IWDKTSLECLKVLTGHTGSVLCLQYDER--VIV 281
Query: 364 SGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWI 423
+GS D T++VWD+ + T++ HN V ++F + G +V+ D+ + +++ +
Sbjct: 282 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRF---SNGLMVTCSKDRSIAVWDMASAT 338
Query: 424 K---ERSLEGHLDKVMSIDIVGPDIYSAGWDRSVNKW 457
R L GH V +D I SA DR++ W
Sbjct: 339 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW 375
Score = 56.2 bits (134), Expect = 1e-07
Identities = 36/160 (22%), Positives = 77/160 (47%), Gaps = 10/160 (6%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH+ V L + D ++ T D+ +WD+ +G+ + +L H++ + + +S NG +
Sbjct: 265 GHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLMV 321
Query: 363 ASGSGDGTIKVWDIRKKGNV---ETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFND 419
S D +I VWD+ ++ ++ H + V+ V F+ + Y+VS+ D+ + +++
Sbjct: 322 TC-SKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWST 377
Query: 420 GNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRSVNKWGV 459
R+L GH + + + S D ++ W +
Sbjct: 378 STCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI 417
Score = 55.1 bits (131), Expect = 2e-07
Identities = 63/254 (24%), Positives = 101/254 (38%), Gaps = 17/254 (6%)
Query: 208 NSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFA 267
++L +I C RS + + L + D + I D I I+D +K+L
Sbjct: 215 HNLQRIQC-RSENSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVL---TGHTG 268
Query: 268 QVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAE-VFSLSFHNDGSLVSTAGLD 326
V C + + T + + + V +L H E V L F N L+ T D
Sbjct: 269 SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN--GLMVTCSKD 326
Query: 327 AIALIWDIRSGKNIMS---LQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVE 383
+WD+ S +I L GH + VD+ + S SGD TIKVW V
Sbjct: 327 RSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVR 384
Query: 384 TILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGP 443
T+ H ++ +++ + +VS D + +++ R LEGH + V I
Sbjct: 385 TLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 441
Query: 444 DIYSAGWDRSVNKW 457
I S +D + W
Sbjct: 442 RIVSGAYDGKIKVW 455
>Hs16306494 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 542
Score = 61.6 bits (148), Expect = 2e-09
Identities = 60/270 (22%), Positives = 116/270 (42%), Gaps = 26/270 (9%)
Query: 205 LVDNSL-----SKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKIL 259
L DNS+ + + C + L+G S L D + I + D + ++D + L
Sbjct: 257 LRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL 316
Query: 260 YKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQE---GHSAEVFSLSFHND 316
++ +R N + + S D++ + D I ++ GH A V + F +D
Sbjct: 317 IHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF-DD 373
Query: 317 GSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDI 376
+VS +G D +W + + + +L GH + I + + + SGS D TI++WDI
Sbjct: 374 KYIVSASG-DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDI 430
Query: 377 RKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN---------DGNWIKERS 427
+ + H +V ++F+ + +VS YD K+ +++ + + R+
Sbjct: 431 ECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRAPASTLCLRT 487
Query: 428 LEGHLDKVMSIDIVGPDIYSAGWDRSVNKW 457
L H +V + I S+ D ++ W
Sbjct: 488 LVEHSGRVFRLQFDEFQIISSSHDDTILIW 517
Score = 56.6 bits (135), Expect = 8e-08
Identities = 40/157 (25%), Positives = 77/157 (48%), Gaps = 10/157 (6%)
Query: 304 HSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLA 363
+S V+ L + +D ++S ++I IWD S + + L GH+ + + + + +
Sbjct: 239 NSKGVYCLQY-DDEKIISGLRDNSIK-IWDKTSLECLKVLTGHTGSVLCLQYDER--VIV 294
Query: 364 SGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWI 423
+GS D T++VWD+ + T++ HN V ++F + G +V+ D+ + +++ +
Sbjct: 295 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRF---SNGLMVTCSKDRSIAVWDMASAT 351
Query: 424 K---ERSLEGHLDKVMSIDIVGPDIYSAGWDRSVNKW 457
R L GH V +D I SA DR++ W
Sbjct: 352 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW 388
Score = 56.2 bits (134), Expect = 1e-07
Identities = 36/160 (22%), Positives = 77/160 (47%), Gaps = 10/160 (6%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH+ V L + D ++ T D+ +WD+ +G+ + +L H++ + + +S NG +
Sbjct: 278 GHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLMV 334
Query: 363 ASGSGDGTIKVWDIRKKGNV---ETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFND 419
S D +I VWD+ ++ ++ H + V+ V F+ + Y+VS+ D+ + +++
Sbjct: 335 TC-SKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWST 390
Query: 420 GNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRSVNKWGV 459
R+L GH + + + S D ++ W +
Sbjct: 391 STCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI 430
Score = 55.1 bits (131), Expect = 2e-07
Identities = 63/254 (24%), Positives = 101/254 (38%), Gaps = 17/254 (6%)
Query: 208 NSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFA 267
++L +I C RS + + L + D + I D I I+D +K+L
Sbjct: 228 HNLQRIQC-RSENSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVL---TGHTG 281
Query: 268 QVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAE-VFSLSFHNDGSLVSTAGLD 326
V C + + T + + + V +L H E V L F N L+ T D
Sbjct: 282 SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN--GLMVTCSKD 339
Query: 327 AIALIWDIRSGKNIMS---LQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVE 383
+WD+ S +I L GH + VD+ + S SGD TIKVW V
Sbjct: 340 RSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVR 397
Query: 384 TILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGP 443
T+ H ++ +++ + +VS D + +++ R LEGH + V I
Sbjct: 398 TLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 454
Query: 444 DIYSAGWDRSVNKW 457
I S +D + W
Sbjct: 455 RIVSGAYDGKIKVW 468
>7302082 [A] KOG0640 mRNA cleavage stimulating factor complex; subunit 1
Length = 424
Score = 61.6 bits (148), Expect = 2e-09
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 14/172 (8%)
Query: 256 VKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSA-----EVFS 310
++ LY + + + HP + S S D T L D K + +++ H V
Sbjct: 159 IRTLYDHTDEVSYLEFHPKEHILASASRDGTVKLFDIAKPS---VKKAHKVFTDCEPVLC 215
Query: 311 LSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSL---QGHSKPIYSVDWSQNGYQLASGSG 367
LSFH G V+ + ++D+ + + +S Q H + V +S G A+GS
Sbjct: 216 LSFHPTGDYVAIGTEHNVLRVYDVATTQCFVSAIPSQQHKAGVTCVKYSPTGKLYATGSY 275
Query: 368 DGTIKVWDIRKKGNVETIL-AH-NSIVSQVKFNKQNGGYLVSSGYDKKVNIF 417
DG IK+WD + TI AH + + ++F + NG YL+SSG D V ++
Sbjct: 276 DGDIKIWDGISGRCINTIAEAHGGAAICSLEFTR-NGKYLLSSGMDSLVYLW 326
>SPBC577.09 [KL] KOG4283 Transcription-coupled repair protein CSA contains WD40
domain
Length = 404
Score = 61.2 bits (147), Expect = 3e-09
Identities = 46/165 (27%), Positives = 80/165 (47%), Gaps = 27/165 (16%)
Query: 275 NSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGS------LVSTAGLDAI 328
N S+SFD T + D +QE ++ + + + + S L++TA +
Sbjct: 116 NGIFTSSSFDHTLKVWDVST-----LQEAYTFTMEDMIYSHAWSPIASHCLIATAYRSSS 170
Query: 329 ALIWDIRSGKNIMSLQGHSKPIYSVDWS-QNGYQLASGSGDGTIKVWDIRKKGNV----- 382
+ D++SG SL GH+ + +VDW +N + LASGS DGT ++WDIRK +
Sbjct: 171 IRLCDMQSGSYTHSLSGHTGNVLAVDWCPKNEFVLASGSADGTCRLWDIRKVSSSFACMD 230
Query: 383 ---------ETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN 418
+T ++H V+ + + + YL S G D ++ ++N
Sbjct: 231 LHNKYLPSNQTNISHYGTVNGLAWT-SDARYLASCGTDDRIRVWN 274
>SPBC31F10.13c [DK] KOG0973 Histone transcription regulator HIRA WD repeat
superfamily
Length = 932
Score = 61.2 bits (147), Expect = 3e-09
Identities = 47/191 (24%), Positives = 79/191 (40%), Gaps = 35/191 (18%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRS--------------GKNIMSLQGHSK 348
GH +FS+ H DGS ++T GLD IW + K + + H+
Sbjct: 16 GHRLSIFSIHIHPDGSRIATGGLDGTIRIWSTEAINRENENENENEDLPKQLCCMSTHTG 75
Query: 349 PIYSVDWSQNGYQLASGSGDGTIKVWDIRK----------KGNVET--------ILAHNS 390
+ SV +S NG LASGS D + +W + G T +L H++
Sbjct: 76 TVTSVRFSPNGQYLASGSDDRVVIIWHKEEAIPGLGSTFGSGEKHTENWRSYRRLLGHDN 135
Query: 391 IVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSI--DIVGPDIYSA 448
+ + ++ + +VS G D + ++N + + + +E H V I D G +
Sbjct: 136 DIQDLCWS-YDSQLVVSVGLDSSIIVWNGTTFERLKRIEAHQSHVKGITFDPAGKYFATE 194
Query: 449 GWDRSVNKWGV 459
DR++ W V
Sbjct: 195 SDDRTIKVWRV 205
Score = 51.2 bits (121), Expect = 3e-06
Identities = 40/176 (22%), Positives = 75/176 (41%), Gaps = 22/176 (12%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH ++ L + D LV + GLD+ ++W+ + + + ++ H + + + G
Sbjct: 132 GHDNDIQDLCWSYDSQLVVSVGLDSSIIVWNGTTFERLKRIEAHQSHVKGITFDPAGKYF 191
Query: 363 ASGSGDGTIKVWDIRKKGNVETILA-HNSIVSQVKFNK----QNGGYLVS----SGYDKK 413
A+ S D TIKVW + +TI N+ F + +G ++ + +G
Sbjct: 192 ATESDDRTIKVWRVSDFSIEKTITGPFNNSPLSTYFRRPSWSPDGKHIAAPNAMNGPVSC 251
Query: 414 VNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIY------------SAGWDRSVNKW 457
V+I G W E +L GH + + + P ++ G DRS++ W
Sbjct: 252 VSIIERGTWTSEINLIGH-EGPVEVTAFNPKLFRDKNDKLVCILACGGQDRSLSIW 306
>SPBC1289.11 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 340
Score = 61.2 bits (147), Expect = 3e-09
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 10/207 (4%)
Query: 259 LYKNDARFAQVRCHPCNSFIGSTSFDKT---WILIDTVKQAPILIQEGHSAEVFSLSFHN 315
++ + A R P S+ S D+ W + VK +L G + L +
Sbjct: 46 MFGHTAEVLVARFDPSGSYFASGGMDRQILLWNVFGDVKNYGVL--NGCKGAITDLQWSR 103
Query: 316 DGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL-ASGSGDGTIKVW 374
D +V + D + WD SG+ I +GH+ + ++D + G +L S S D T+KVW
Sbjct: 104 DSRVVYCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVLKVGSELLTSVSDDCTMKVW 163
Query: 375 DIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDK 434
D R K ++TI + + Q G + G D + I++ N L+GH D
Sbjct: 164 DSRSKDCIKTIEEKYPLTAVAI--AQQGTQVFIGGIDGAIKIWDLRNNHCSHVLKGHKDI 221
Query: 435 VMSIDIV--GPDIYSAGWDRSVNKWGV 459
+ S+ I G + S D +V + V
Sbjct: 222 ITSLAISKDGSSLLSNSMDNTVRIFDV 248
Score = 59.7 bits (143), Expect = 9e-09
Identities = 62/267 (23%), Positives = 112/267 (41%), Gaps = 24/267 (8%)
Query: 156 ISKRRDLESKLKQFSLKGMQVIDEKPISEINTSPGGDLMACGSWS-GNLSLVDNSLSKIY 214
+ KR++ ES +K +++ D I+E G L + NL + ++ +
Sbjct: 1 MDKRKESESATNGHLVKRIRIQDSSLITE-----GSVLQRTSDLNVPNLQMFGHTAEVLV 55
Query: 215 CNRSLSGTKIS--GLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCH 272
SG+ + G+D + N+F GD +L ++
Sbjct: 56 ARFDPSGSYFASGGMDRQILLWNVF-------------GDVKNYGVLNGCKGAITDLQWS 102
Query: 273 PCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGS-LVSTAGLDAIALI 331
+ + +S D + D V I +GH+ V +L GS L+++ D +
Sbjct: 103 RDSRVVYCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVLKVGSELLTSVSDDCTMKV 162
Query: 332 WDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSI 391
WD RS I +++ P+ +V +Q G Q+ G DG IK+WD+R + H I
Sbjct: 163 WDSRSKDCIKTIE-EKYPLTAVAIAQQGTQVFIGGIDGAIKIWDLRNNHCSHVLKGHKDI 221
Query: 392 VSQVKFNKQNGGYLVSSGYDKKVNIFN 418
++ + +K +G L+S+ D V IF+
Sbjct: 222 ITSLAISK-DGSSLLSNSMDNTVRIFD 247
Score = 50.8 bits (120), Expect = 4e-06
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 13/196 (6%)
Query: 189 PGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTK--ISGLDWSVDSKNIFVCTHDGRIV 246
P G A G + L+ N + L+G K I+ L WS DS+ ++ + D ++
Sbjct: 60 PSGSYFASGGMDRQI-LLWNVFGDVKNYGVLNGCKGAITDLQWSRDSRVVYCSSSDTHLM 118
Query: 247 IYDSGDETTVKILYKNDARFAQVRCHPC----NSFIGSTSFDKTWILIDTVKQAPI-LIQ 301
+D+ ++ K+ V + + S S D T + D+ + I I+
Sbjct: 119 SWDAVSGQKIR---KHKGHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKDCIKTIE 175
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
E + +++ G+ V G+D IWD+R+ L+GH I S+ S++G
Sbjct: 176 EKYPLTAVAIA--QQGTQVFIGGIDGAIKIWDLRNNHCSHVLKGHKDIITSLAISKDGSS 233
Query: 362 LASGSGDGTIKVWDIR 377
L S S D T++++D++
Sbjct: 234 LLSNSMDNTVRIFDVK 249
>Hs18874090 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 677
Score = 61.2 bits (147), Expect = 3e-09
Identities = 29/112 (25%), Positives = 64/112 (56%), Gaps = 1/112 (0%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
G+ ++SL+ + G+++ + + + +WD R+ +M L+GH+ + ++ +++G Q
Sbjct: 166 GNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQC 225
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKV 414
SGS DGTI++W + ++ + T H+ V ++ N ++ S G D+K+
Sbjct: 226 LSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVN-DAFTHVYSGGRDRKI 276
Score = 57.0 bits (136), Expect = 6e-08
Identities = 42/162 (25%), Positives = 75/162 (45%), Gaps = 12/162 (7%)
Query: 304 HSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRS------GKNIM---SLQGHSKPIYSVD 354
H V +L++ D LV++AGLD +WD+ + N + SL G+ IYS+
Sbjct: 116 HKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLA 175
Query: 355 WSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKV 414
+Q G + SGS + ++VWD R + + H V + N+ +G +S D +
Sbjct: 176 MNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNR-DGTQCLSGSSDGTI 234
Query: 415 NIFNDGNWIKERSLEGHLDKVMSIDI--VGPDIYSAGWDRSV 454
+++ G + H + V ++ + +YS G DR +
Sbjct: 235 RLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKI 276
Score = 55.8 bits (133), Expect = 1e-07
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 15/150 (10%)
Query: 322 TAGLDAIALIWDIRSGKN---IMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRK 378
TAG D+I IW + K I S++ H+ + + NG L S S D T+KVW+ K
Sbjct: 47 TAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHK 106
Query: 379 KGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN---------DGNWIKERSLE 429
+ T+ H V + + K + S+G D+++ +++ N + SL
Sbjct: 107 GFCMSTLRTHKDYVKALAYAKDK-ELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLS 165
Query: 430 GHLDKVMSIDI--VGPDIYSAGWDRSVNKW 457
G+ D + S+ + +G I S ++ + W
Sbjct: 166 GNKDSIYSLAMNQLGTIIVSGSTEKVLRVW 195
>At3g18060 [Z] KOG0318 WD40 repeat stress protein/actin interacting protein
Length = 609
Score = 61.2 bits (147), Expect = 3e-09
Identities = 75/301 (24%), Positives = 125/301 (40%), Gaps = 30/301 (9%)
Query: 181 PISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCN--RSLSGTKISGLDWSVDSKNIFV 238
P + SP G+ +A G SG + + + N + L+G +I L WS D I V
Sbjct: 58 PATVARYSPNGEWIASGDVSGTVRIWGAYNDHVLKNEFKVLAG-RIDDLQWSADGMRI-V 115
Query: 239 CTHDG------RIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDT 292
+ DG R ++DSG + V + R P F T + L++
Sbjct: 116 ASGDGKGKSLVRAFMWDSG--SNVGEFDGHSRRVLSCAIKPTRPFRIVTCGED--FLVNF 171
Query: 293 VKQAPI---LIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGK---NIMSLQGH 346
+ P L HS V + F DGS T D +I+D ++ + + S GH
Sbjct: 172 YEGPPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGH 231
Query: 347 SKPIYSVDWSQNGYQLASGSGDGTIKVWDI--RKKGNVETIL----AHNSIVSQVKFNKQ 400
IY+V WS +G Q+ + S D + K+WDI G++ T L + + +
Sbjct: 232 KGSIYAVSWSPDGKQVLTVSADKSAKIWDISDNGSGSLNTTLNCPGSSGGVDDMLVGCLW 291
Query: 401 NGGYLVSSGYDKKVNIFNDGNWIKER-SLEGHLDKVMSIDIVGPD---IYSAGWDRSVNK 456
++V+ ++IF+ + K GH+ V S+ ++ + I S +D + K
Sbjct: 292 QNDHIVTVSLGGTISIFSASDLDKSPFQFSGHMKNVSSLAVLKGNADYILSGSYDGLICK 351
Query: 457 W 457
W
Sbjct: 352 W 352
>At3g16650 [A] KOG0285 Pleiotropic regulator 1
Length = 477
Score = 61.2 bits (147), Expect = 3e-09
Identities = 47/179 (26%), Positives = 77/179 (42%), Gaps = 3/179 (1%)
Query: 232 DSKNIFVCTH--DGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWIL 289
D N + CT D I I+D L + + + ++++ S DK
Sbjct: 177 DPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKC 236
Query: 290 IDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKP 349
D + I GH V+ L+ H +V T G D++ +WDIR+ I L H
Sbjct: 237 WDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLP-HDSD 295
Query: 350 IYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSS 408
++SV Q+ +GS D TIK WD+R ++ TI H V + + + ++ +S
Sbjct: 296 VFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSAS 354
>7290520 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 478
Score = 61.2 bits (147), Expect = 3e-09
Identities = 78/375 (20%), Positives = 157/375 (41%), Gaps = 24/375 (6%)
Query: 99 IDTERSKVDDEDEEFYTPASQQLIEMRKFLIIYSMQRSKXXXXXXXXXXVSQNVKNVISK 158
ID ++ ++ +E YTPA+++ + F ++ VS + ++
Sbjct: 93 IDDVKTAGEERNENAYTPAAKRSL----FKYQSPTKQDYNGECPYSLSPVSAKSQKLLRS 148
Query: 159 RRDLESKLKQFSLKGM---QVIDEKPISEINTSPGGDL-MACGSWSGNLSLVDNSLSKIY 214
R K+ + K + ++ D+ ++ ++ S L + GS S + ++++
Sbjct: 149 PRKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVLAVGLGSCVYLWSACTSQVTRL- 207
Query: 215 CNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPC 274
C+ S ++ + W+ + V TH G + ++D K + K + A+V
Sbjct: 208 CDLSPDANTVTSVSWNERGNTVAVGTHHGYVTVWDVAAN---KQINKLNGHSARVGALAW 264
Query: 275 NSFIGSTSFDKTWILIDTVKQAPILIQE----GHSAEVFSLSFHNDGSLVSTAGLDAIAL 330
NS I S+ WI I + P L E GH EV L + D +++ G D
Sbjct: 265 NSDILSSGSRDRWI-IQRDTRTPQLQSERRLAGHRQEVCGLKWSPDNQYLASGGNDNRLY 323
Query: 331 IWDIRSGKNIMSLQGHSKPIYSVDWSQNGY-QLASGSG--DGTIKVWDIRKKGNVETILA 387
+W+ S + S H + ++ WS + + LASG G D I+ W+ G +
Sbjct: 324 VWNQHSVNPVQSYTEHMAAVKAIAWSPHHHGLLASGGGTADRCIRFWN-TLTGQPMQCVD 382
Query: 388 HNSIVSQVKFNKQNGGYLVSSGYDK-KVNIFNDGNWIKERSLEGHLDKVMSIDIV--GPD 444
S V + ++K + + + GY + ++ ++ + + L GH +V+ + + G
Sbjct: 383 TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEA 442
Query: 445 IYSAGWDRSVNKWGV 459
I + D ++ W V
Sbjct: 443 IVTGAGDETLRFWNV 457
Score = 50.1 bits (118), Expect = 7e-06
Identities = 45/195 (23%), Positives = 90/195 (46%), Gaps = 8/195 (4%)
Query: 192 DLMACGSWSGNLSLVDNSLSKIYCNRSLSGTK--ISGLDWSVDSKNIFVCTHDGRIVIYD 249
D+++ GS + D ++ R L+G + + GL WS D++ + +D R+ +++
Sbjct: 267 DILSSGSRDRWIIQRDTRTPQLQSERRLAGHRQEVCGLKWSPDNQYLASGGNDNRLYVWN 326
Query: 250 SGDETTVKILYKNDARFAQVRCHPCNSFI---GSTSFDKTWILIDTVKQAPILIQEGHSA 306
V+ ++ A + P + + G + D+ +T+ P+ + S
Sbjct: 327 QHSVNPVQSYTEHMAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGS- 385
Query: 307 EVFSLSFHNDGS-LVSTAGLDAIA-LIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLAS 364
+V +L++ S LVST G L+W S + L GHS + + S +G + +
Sbjct: 386 QVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVT 445
Query: 365 GSGDGTIKVWDIRKK 379
G+GD T++ W++ K
Sbjct: 446 GAGDETLRFWNVFSK 460
>Hs7705377 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 496
Score = 60.8 bits (146), Expect = 4e-09
Identities = 58/254 (22%), Positives = 113/254 (43%), Gaps = 13/254 (5%)
Query: 215 CNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPC 274
C+ S+ G ++ + WS + V TH G + I+D+ + +L + AR + +
Sbjct: 223 CDLSVEGDSVTSVGWSERGNLVAVGTHKGFVQIWDAAAGKKLSMLEGHTARVGALAWNA- 281
Query: 275 NSFIGSTSFDKTWILIDTVKQAPILIQ---EGHSAEVFSLSFHNDGSLVSTAGLDAIALI 331
+ S S D+ IL ++ P+ + +GH EV L + D L+++ G D L+
Sbjct: 282 -EQLSSGSRDR-MILQRDIRTPPLQSERRLQGHRQEVCGLKWSTDHHLLASGGNDNKLLV 339
Query: 332 WDIRSGKNIMSLQGHSKPIYSVDWSQNGY-QLASGSG--DGTIKVWDIRKKGNVETILAH 388
W+ S + H + ++ WS + + LASG G D I+ W+ G +
Sbjct: 340 WNHSSLSPVQQYTEHLAAVKAIAWSPHQHGLLASGGGTADRCIRFWN-TLTGQPLQCIDT 398
Query: 389 NSIVSQVKFNKQNGGYLVSSGYDK-KVNIFNDGNWIKERSLEGHLDKVMSIDIV--GPDI 445
S V + ++K + + GY + ++ ++ + + L GH +V+ + + G I
Sbjct: 399 GSQVCNLAWSKHANELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAI 458
Query: 446 YSAGWDRSVNKWGV 459
+ D ++ W V
Sbjct: 459 VTGAGDETLRFWNV 472
>Hs13375690 [Z] KOG1445 Tumor-specific antigen (contains WD repeats)
Length = 925
Score = 60.8 bits (146), Expect = 4e-09
Identities = 28/86 (32%), Positives = 52/86 (59%), Gaps = 1/86 (1%)
Query: 290 IDTVKQAPILIQEGHSAEVFSLSFHN-DGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSK 348
++ V P + GH+ ++ SL FH ++++++ D IWD+++G + + LQGH
Sbjct: 579 LEEVLTTPETVLTGHTEKICSLRFHPLAANVLASSSYDLTVRIWDLQAGADRLKLQGHQD 638
Query: 349 PIYSVDWSQNGYQLASGSGDGTIKVW 374
I+S+ WS +G QLA+ DG ++V+
Sbjct: 639 QIFSLAWSPDGQQLATVCKDGRVRVY 664
>ECU01g1300 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 423
Score = 60.8 bits (146), Expect = 4e-09
Identities = 62/233 (26%), Positives = 102/233 (43%), Gaps = 25/233 (10%)
Query: 230 SVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWIL 289
S D + I + DGR++ G + V ND ++ S S DKT +
Sbjct: 131 SSDDQTIKIFGMDGRLIRTFVGHKGGVWTFMFND------------KYLVSGSTDKTARI 178
Query: 290 IDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKP 349
D + + GH + V SL ++D ++T DA IW+ R G + L+GH+
Sbjct: 179 WDLWTGCTLCVLIGHKSVVRSLKIYDD--YIATGSRDAEIRIWNFR-GTCLNVLKGHTMS 235
Query: 350 IYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSG 409
+ +D ++ L SGS DG++ +WD R+ + + H+ V V + Y+ S
Sbjct: 236 VRCMDMGES--YLVSGSYDGSVALWDYRRGKLLRYLKPHSLRVYSVSL---SSSYVASGS 290
Query: 410 YDKKVNIFN-DGNWIKERSLEGHLDKVMSIDIVGPD--IYSAGWDRSVNKWGV 459
D V++ DG + S H V+ + VG + S+G D + KW V
Sbjct: 291 LDSSVHVSTLDGK--LQCSYRIHRSLVIWLKFVGSGRFLLSSGADGILCKWDV 341
>At3g44530 [DK] KOG0973 Histone transcription regulator HIRA WD repeat
superfamily
Length = 1051
Score = 60.8 bits (146), Expect = 4e-09
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 333 DIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIV 392
D+ + K +M+L+GH+ + ++WS + LASGS D T+ +W++R + H S+V
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLV 163
Query: 393 SQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDK 434
V ++ G ++ S DK V I+ +W +GH K
Sbjct: 164 KGVTWD-PIGSFIASQSDDKTVIIWRTSDWGMAHRTDGHWAK 204
Score = 56.6 bits (135), Expect = 8e-08
Identities = 50/193 (25%), Positives = 77/193 (38%), Gaps = 21/193 (10%)
Query: 182 ISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTH 241
I I+ P G+ A G G+ VD L I L T L S N
Sbjct: 16 IFSIDVQPNGERFATGG--GDHKSVDKDLQNIDTKERLLAT----LRDHFGSVNCVRWAK 69
Query: 242 DGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQ 301
+ R V S D+ ++ H G+T F + D ++
Sbjct: 70 NSRYVASGSDDQV--------------IQIHERKPGSGTTEFG-SGEAPDVENWKAVMTL 114
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
GH+A+V L++ D S++++ LD IW++R+G L+GH + V W G
Sbjct: 115 RGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSF 174
Query: 362 LASGSGDGTIKVW 374
+AS S D T+ +W
Sbjct: 175 IASQSDDKTVIIW 187
>YOR212w [R] KOG0286 G-protein beta subunit
Length = 423
Score = 60.5 bits (145), Expect = 5e-09
Identities = 45/207 (21%), Positives = 87/207 (41%), Gaps = 13/207 (6%)
Query: 223 KISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTS 282
KIS WS DSK I + DG ++I+DS + + P ++ + S
Sbjct: 94 KISDFRWSRDSKRILSASQDGFMLIWDSASGLKQNAIPLDSQWVLSCAISPSSTLVASAG 153
Query: 283 FDKTWILI-----DTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSG 337
+ + + V Q I +GH+ + + F D + + TA D +WDI
Sbjct: 154 LNNNCTIYRVSKENRVAQNVASIFKGHTCYISDIEF-TDNAHILTASGDMTCALWDIPKA 212
Query: 338 KNIMSLQGHSKPIYSV------DWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSI 391
K + H + ++ + + AS DG +WD R V++ ++S
Sbjct: 213 KRVREYSDHLGDVLALAIPEEPNSENSSNTFASCGSDGYTYIWDSRSPSAVQSFYVNDSD 272
Query: 392 VSQVKFNKQNGGYLVSSGYDKKVNIFN 418
++ ++F K +G +V+ + +N+++
Sbjct: 273 INALRFFK-DGMSIVAGSDNGAINMYD 298
Score = 50.4 bits (119), Expect = 5e-06
Identities = 47/202 (23%), Positives = 89/202 (43%), Gaps = 17/202 (8%)
Query: 177 IDEKPISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNI 236
I E+P SE +++ +CGS G + D+ + ++ + I+ L + D +I
Sbjct: 230 IPEEPNSENSSNT---FASCGS-DGYTYIWDSRSPSAVQSFYVNDSDINALRFFKDGMSI 285
Query: 237 FVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCH----PCNSFIGSTSFDKTWILIDT 292
+ +G I +YD + ++ A F+ R + P +++ + T T
Sbjct: 286 VAGSDNGAINMYDLRSDCSI-------ATFSLFRGYEERTPTPTYMAANMEYNTAQSPQT 338
Query: 293 VKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYS 352
+K + V SL F G L+ + D ++WD+ G+ + L+GH +
Sbjct: 339 LKSTSSSYLDNQG--VVSLDFSASGRLMYSCYTDIGCVVWDVLKGEIVGKLEGHGGRVTG 396
Query: 353 VDWSQNGYQLASGSGDGTIKVW 374
V S +G + +GS D T+K+W
Sbjct: 397 VRSSPDGLAVCTGSWDSTMKIW 418
>At5g15550 [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 433
Score = 60.5 bits (145), Expect = 5e-09
Identities = 64/286 (22%), Positives = 110/286 (38%), Gaps = 73/286 (25%)
Query: 239 CTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPI 298
C+H I+ SG ++V ++ NDA V + + FD + T K
Sbjct: 142 CSH---ILEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAY 198
Query: 299 LIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDI--------------RSGKN----- 339
I GH A V S+S G++V ++ D +W+ R G N
Sbjct: 199 KILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNESTSEGESVSVKKRKGNNQAEES 258
Query: 340 ------IMSLQGHSKPIYSVDW-------------------------------------- 355
+ SL GH++ + SV W
Sbjct: 259 QSEGEAVTSLVGHTQCVSSVVWPEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTV 318
Query: 356 ---SQNGYQLASGSGDGTIKVWDIRKKGNVETIL---AHNSIVSQVKFNKQNGGYLVSSG 409
++ +A+G D ++VWD RK G + +H+S +S K++K + +L+S+
Sbjct: 319 DVGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSAS 378
Query: 410 YDKKVNIFNDGNWIKERSLEGHLDKVMSID-IVGPDIYSAGWDRSV 454
YD K+ +++ ++ H DKV+S D G + S G D ++
Sbjct: 379 YDGKIMLWDLRTAWPLSVIDTHNDKVLSADWWKGESVVSGGADSNL 424
>7300706 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 510
Score = 60.5 bits (145), Expect = 5e-09
Identities = 52/244 (21%), Positives = 102/244 (41%), Gaps = 29/244 (11%)
Query: 235 NIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPC---------NSFIGSTSFDK 285
++ +D +++I S D +TV++ N H C N + + S D+
Sbjct: 252 SVLCLQYDDKVIISGSSD-STVRVWDVNTGEMVNTLIHHCEAVLHLRFNNGMMVTCSKDR 310
Query: 286 TWILIDTVKQAPILIQE---GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMS 342
+ + D + I ++ GH A V + F D + +A D +W S + + +
Sbjct: 311 SIAVWDMTSPSEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWSTSSCEFVRT 368
Query: 343 LQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNG 402
L GH + I + + + SGS D +I++WDI + + H +V ++F+ +
Sbjct: 369 LNGHKRGIACLQYRDR--LVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCIRFDTKR- 425
Query: 403 GYLVSSGYDKKVNIFN---------DGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRS 453
+VS YD K+ +++ N + +L H +V + I S+ D +
Sbjct: 426 --IVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLVEHTGRVFRLQFDEFQIVSSSHDDT 483
Query: 454 VNKW 457
+ W
Sbjct: 484 ILIW 487
Score = 60.5 bits (145), Expect = 5e-09
Identities = 45/158 (28%), Positives = 75/158 (46%), Gaps = 12/158 (7%)
Query: 304 HSAEVFSLSFHNDGSLVSTAGL-DAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
+S V+ L + +DG +VS GL D IWD + + +L GH+ + + + +
Sbjct: 209 NSKGVYCLQY-DDGKIVS--GLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDK--VI 263
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIF---ND 419
SGS D T++VWD+ V T++ H V ++F N G +V+ D+ + ++ +
Sbjct: 264 ISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF---NNGMMVTCSKDRSIAVWDMTSP 320
Query: 420 GNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRSVNKW 457
R L GH V +D I SA DR++ W
Sbjct: 321 SEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW 358
Score = 57.8 bits (138), Expect = 3e-08
Identities = 34/160 (21%), Positives = 76/160 (47%), Gaps = 10/160 (6%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH+ V L + D ++ + D+ +WD+ +G+ + +L H + + + + N +
Sbjct: 248 GHTGSVLCLQY--DDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--NNGMM 303
Query: 363 ASGSGDGTIKVWDIRKKGNV---ETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFND 419
+ S D +I VWD+ + ++ H + V+ V F+++ Y+VS+ D+ + +++
Sbjct: 304 VTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEK---YIVSASGDRTIKVWST 360
Query: 420 GNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRSVNKWGV 459
+ R+L GH + + + S D S+ W +
Sbjct: 361 SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDI 400
Score = 55.8 bits (133), Expect = 1e-07
Identities = 63/249 (25%), Positives = 99/249 (39%), Gaps = 27/249 (10%)
Query: 213 IYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCH 272
+YC + G +SGL D I I+D D VK L + ++
Sbjct: 213 VYCLQYDDGKIVSGL-------------RDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYD 259
Query: 273 PCNSFIGST-SFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALI 331
GS+ S + W ++T + LI H V L F+N ++ T D +
Sbjct: 260 DKVIISGSSDSTVRVWD-VNTGEMVNTLIH--HCEAVLHLRFNN--GMMVTCSKDRSIAV 314
Query: 332 WDIRSGKNIMS---LQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAH 388
WD+ S I L GH + VD+ + + S SGD TIKVW V T+ H
Sbjct: 315 WDMTSPSEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWSTSSCEFVRTLNGH 372
Query: 389 NSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIYSA 448
++ +++ + +VS D + +++ R LEGH + V I I S
Sbjct: 373 KRGIACLQYRDR---LVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCIRFDTKRIVSG 429
Query: 449 GWDRSVNKW 457
+D + W
Sbjct: 430 AYDGKIKVW 438
>Hs4826956 [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 919
Score = 60.1 bits (144), Expect = 7e-09
Identities = 43/168 (25%), Positives = 76/168 (44%), Gaps = 13/168 (7%)
Query: 298 ILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQ 357
+L Q+GH + +L++ DG + T G D +W+ SG ++ HS + V ++
Sbjct: 366 VLKQQGHFNSMVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTFTEHSSGVTGVTFTA 425
Query: 358 NGYQLASGSGDGTIKVWDIRKKGNVETILAHNSI-VSQVKFNKQNGGYLVSSGYDKKVNI 416
GY + + S DGT++ +D+ + N T + S V + G +VS+G I
Sbjct: 426 TGYVVVTSSMDGTVRAFDLHRYRNFRTFTSPRPTQFSCVAVDAS--GEIVSAGAQDSFEI 483
Query: 417 FNDGNWIKERS-----LEGHLDKVMSI--DIVGPDIYSAGWDRSVNKW 457
F W + L GH + + + + + SA WD++V W
Sbjct: 484 FV---WSMQTGRLLDVLSGHEGPISGLCFNPMKSVLASASWDKTVRLW 528
Score = 55.5 bits (132), Expect = 2e-07
Identities = 56/272 (20%), Positives = 114/272 (41%), Gaps = 4/272 (1%)
Query: 165 KLKQFSLKGMQVIDEKPISEINTSPGGDLMACG-SWSGNLSLVDNSLSKIYCNRSLSGTK 223
+L +F+L I ++ I+ + + GD +A G S G L + + +
Sbjct: 316 ELPEFNLIHSLSISDQSIASVAINSSGDWIAFGCSGLGQLLVWEWQSESYVLKQQGHFNS 375
Query: 224 ISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSF 283
+ L +S D + I DG++ ++++ ++ + V + ++S
Sbjct: 376 MVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTFTEHSSGVTGVTFTATGYVVVTSSM 435
Query: 284 DKTWILIDTVKQAPILIQEGHSAEVFS-LSFHNDGSLVSTAGLDAIAL-IWDIRSGKNIM 341
D T D + FS ++ G +VS D+ + +W +++G+ +
Sbjct: 436 DGTVRAFDLHRYRNFRTFTSPRPTQFSCVAVDASGEIVSAGAQDSFEIFVWSMQTGRLLD 495
Query: 342 SLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQN 401
L GH PI + ++ LAS S D T+++WD+ + LA S V F + +
Sbjct: 496 VLSGHEGPISGLCFNPMKSVLASASWDKTVRLWDMFDSWRTKETLALTSDALAVTF-RPD 554
Query: 402 GGYLVSSGYDKKVNIFNDGNWIKERSLEGHLD 433
G L + + ++ ++ N ++ S+EG D
Sbjct: 555 GAELAVATLNSQITFWDPENAVQTGSIEGRHD 586
>CE11944 [Z] KOG0318 WD40 repeat stress protein/actin interacting protein
Length = 600
Score = 60.1 bits (144), Expect = 7e-09
Identities = 62/286 (21%), Positives = 116/286 (39%), Gaps = 16/286 (5%)
Query: 188 SPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLS--GTKISGLDWSVDSKNIFVCTHD--- 242
SP G A G GN+ + D + S ++ + + W +SK I
Sbjct: 68 SPTGFYCASGDTQGNIRIWDTTQSTHILKHTIPVFSGPVKDIAWDSESKRIAAVGEGKER 127
Query: 243 -GRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSF-IGSTSFDKTWILIDTVKQAPILI 300
G + + D+ T+ L V P F I S S D T + +
Sbjct: 128 FGHVFLLDT--TTSNGSLTGQSRTMNSVDFKPTRPFRIISGSDDNTVAIFEGPPFKFKHT 185
Query: 301 QEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQ-----GHSKPIYSVDW 355
+ H V S ++NDGSL ++ G D ++++ G+ + L+ H+ I+++ W
Sbjct: 186 FDHHKKFVQSTRYNNDGSLFASTGSDGTVVLYNGVDGEKVGVLEDAKGVAHTGSIFALAW 245
Query: 356 SQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVN 415
S + ++A+ S D ++K+WD+ + TI+ + I Q L++ +N
Sbjct: 246 SPDQSRIATASADKSVKIWDVSARKLERTIVMGSKIEDQQLGIVWTKSALITVSVSGFLN 305
Query: 416 IFNDGNWIKERSLEGHLDKV--MSIDIVGPDIYSAGWDRSVNKWGV 459
N + E+ +GH + +S G ++SA + + W +
Sbjct: 306 FLNPDDGSVEKIRQGHNKAITALSKSSDGKFLFSADAEGHITTWEI 351
Score = 53.9 bits (128), Expect = 5e-07
Identities = 34/121 (28%), Positives = 66/121 (54%), Gaps = 8/121 (6%)
Query: 304 HSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQG---HSKPIYSVDWSQNGY 360
HSAE+ ++SF +DG ++ L + + + + ++ S H+ + +V WS +
Sbjct: 479 HSAEITAVSFSDDGEYLAVTDLARKVIPYSVSTDFSVTSPNSWTFHTSKVLTVAWSPDNQ 538
Query: 361 QLASGSGDGTIKVWDIRKKGNVETIL--AH-NSIVSQVKFNKQNGGYLVSSGYDKKVNIF 417
+LA+GS D ++ +WD++K G I+ AH S V+ V++ + +VS+G D + +
Sbjct: 539 RLATGSIDTSVIIWDMKKPGEHPVIIKGAHPMSSVNVVRWLDET--TVVSAGQDSNIKFW 596
Query: 418 N 418
N
Sbjct: 597 N 597
>At4g35050 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 424
Score = 60.1 bits (144), Expect = 7e-09
Identities = 38/140 (27%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Query: 297 PILIQEGHSAEVFSLSFH-NDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDW 355
P+ + EGH + + +++H + ++ +AG D +IWD+R+ + ++ H + I + +
Sbjct: 210 PMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSF 269
Query: 356 SQ-NGYQLASGSGDGTIKVWDIRK-KGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKK 413
+ N + LA+ S D T+ ++D+RK + + H V QV+++ + L SSG D++
Sbjct: 270 NPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRR 329
Query: 414 VNIFNDGNWIKERSLEGHLD 433
+ ++ D N + + LE LD
Sbjct: 330 LMVW-DINRVGDEQLEIELD 348
>SPBC244.03 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 796
Score = 59.7 bits (143), Expect = 9e-09
Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 26/220 (11%)
Query: 234 KNIFVCTHDG---RIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKT---- 286
KN FVC D R+ Y++G++ T + + R V HP F+ ++S D T
Sbjct: 68 KNWFVCGSDDFQVRVYNYNTGEKVTQFEAHPDYIRALVV--HPTQPFLLTSSDDMTIKCF 125
Query: 287 -----WILIDTVKQAPILIQEGHSAEVFSLSFH-NDGSLVSTAGLDAIALIWDIRSGKNI 340
W + T EGHS V SL+ + D + +++ LD +W S
Sbjct: 126 NWDMSWKCVQTF--------EGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGSSVAN 177
Query: 341 MSLQGHSKPIYSVDWSQNGYQ--LASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFN 398
+LQ H + + V++ G + L + D IKVWD + K V + H + VS F+
Sbjct: 178 FTLQAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKACVRILEGHTNNVSFAFFH 237
Query: 399 KQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSI 438
+ ++S D V I++ ++ +S LD+ I
Sbjct: 238 SK-FPIIISGSEDGTVKIWHTLSYSLIKSYNFSLDRAWCI 276
>Hs8922679 [R] KOG0275 Conserved WD40 repeat-containing protein
Length = 513
Score = 59.7 bits (143), Expect = 9e-09
Identities = 26/77 (33%), Positives = 44/77 (56%)
Query: 301 QEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGY 360
+ HS V LSF D S + +A D I ++SGK + +GHS + ++Q+G+
Sbjct: 303 ERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGH 362
Query: 361 QLASGSGDGTIKVWDIR 377
+ S S DGT+K+W+++
Sbjct: 363 YIISASSDGTVKIWNMK 379
Score = 57.8 bits (138), Expect = 3e-08
Identities = 31/112 (27%), Positives = 60/112 (52%), Gaps = 2/112 (1%)
Query: 308 VFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQ-GHSKPIYSVDWSQNGYQLASGS 366
V + F D +++T D +W I+SG+ + + HSK + + +S++ Q+ S S
Sbjct: 267 VLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSAS 326
Query: 367 GDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN 418
D TI++ ++ ++ H+S V++ F Q+G Y++S+ D V I+N
Sbjct: 327 FDQTIRIHGLKSGKTLKEFRGHSSFVNEATFT-QDGHYIISASSDGTVKIWN 377
>Hs20548461 [R] KOG0644 Uncharacterized conserved protein contains WD40 repeat
and BROMO domains
Length = 736
Score = 59.7 bits (143), Expect = 9e-09
Identities = 31/112 (27%), Positives = 56/112 (49%), Gaps = 3/112 (2%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH + V+ ++F G + T D + IW G+ + +L+GHS I + + +
Sbjct: 209 GHLSSVYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLI 268
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKF---NKQNGGYLVSSGYD 411
A+GS D ++VW +R V + H++ ++ ++F K YL S+G D
Sbjct: 269 AAGSCDKVVRVWCLRTCAPVAVLQGHSASITSIQFCPSTKGTNRYLTSTGAD 320
>CE29339 [S] KOG0295 WD40 repeat-containing protein
Length = 404
Score = 59.7 bits (143), Expect = 9e-09
Identities = 42/158 (26%), Positives = 75/158 (46%), Gaps = 4/158 (2%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH + + FH +++++ DA +WD +G+ +L+GH+ + + G QL
Sbjct: 104 GHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQL 163
Query: 363 ASGSGDGTIKVWDIRKKGN-VETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGN 421
S S D +IK+WD + + ++++ H VS V F G +++S+ D + ++
Sbjct: 164 VSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTF-LPTGDFVLSASRDHTIKQWDIST 222
Query: 422 WIKERSLEGHLDKVMSIDIV--GPDIYSAGWDRSVNKW 457
+ GH D V I I G SA D++V W
Sbjct: 223 GYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVW 260
>CE20709 [R] KOG1538 Uncharacterized conserved protein WDR10 contains WD40
repeats
Length = 1047
Score = 59.7 bits (143), Expect = 9e-09
Identities = 36/126 (28%), Positives = 63/126 (49%), Gaps = 3/126 (2%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
G ++ L+F DGS + A D ++D+ G + +L+GH +Y+V WS NG
Sbjct: 14 GEQVCIYDLAFKPDGSELLLAA-DNKVYLFDVNEGGQMQTLKGHKDLVYTVAWSHNGELF 72
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNW 422
ASG D + +W+ + +G + +H ++ + FN N L + + + D N
Sbjct: 73 ASGGADKLVILWNEKHEGTLR--YSHTDVIQCMMFNPCNQILLTCALNEFGLWSTADKNV 130
Query: 423 IKERSL 428
IK+RS+
Sbjct: 131 IKQRSV 136
>At4g33270 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 457
Score = 59.7 bits (143), Expect = 9e-09
Identities = 53/250 (21%), Positives = 112/250 (44%), Gaps = 17/250 (6%)
Query: 224 ISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILY-KNDARFAQVRCHPCNSFIGSTS 282
++ ++W+ D +++ V ++ + ++DS ++ L + +R + + N + +
Sbjct: 185 VTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWN--NHILTTGG 242
Query: 283 FDKTWILIDTVKQAPIL-IQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWD--IRSGKN 339
D I D ++PI+ GH+ EV L + G +++ G D + IWD + S +
Sbjct: 243 MDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNS 302
Query: 340 ----IMSLQGHSKPIYSVDW---SQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIV 392
+ L+ H+ + ++ W N G GD TIK W+ + ++ + +
Sbjct: 303 TTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVC 362
Query: 393 SQVKFNKQNGGYLVSSGY-DKKVNIFNDGNWIKERSLEGHLDKV--MSIDIVGPDIYSAG 449
S + ++K L S G+ ++ ++ + +K L GH +V M+ G + SA
Sbjct: 363 S-LLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAA 421
Query: 450 WDRSVNKWGV 459
D ++ W V
Sbjct: 422 GDETLRFWNV 431
Score = 55.8 bits (133), Expect = 1e-07
Identities = 36/153 (23%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 227 LDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDAR--FAQVRCHPCNSFIGSTSFD 284
LDW S N+ D + ++D+ +T +++ ++ + + P + +
Sbjct: 146 LDWG--SANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNN 203
Query: 285 KTWILIDTVKQAPI-LIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIM-S 342
L D+ + ++ GH + V SL+++N +++T G+D + + D+R I+ +
Sbjct: 204 SEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNH--ILTTGGMDGLIINNDVRIRSPIVET 261
Query: 343 LQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWD 375
+GH++ + + WS +G QLASG D + +WD
Sbjct: 262 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWD 294
>At4g33260 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 447
Score = 59.7 bits (143), Expect = 9e-09
Identities = 53/250 (21%), Positives = 112/250 (44%), Gaps = 17/250 (6%)
Query: 224 ISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILY-KNDARFAQVRCHPCNSFIGSTS 282
++ ++W+ D +++ V ++ + ++DS ++ L + +R + + N + +
Sbjct: 175 VTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWN--NHILTTGG 232
Query: 283 FDKTWILIDTVKQAPIL-IQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWD--IRSGKN 339
D I D ++PI+ GH+ EV L + G +++ G D + IWD + S +
Sbjct: 233 MDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNS 292
Query: 340 ----IMSLQGHSKPIYSVDW---SQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIV 392
+ L+ H+ + ++ W N G GD TIK W+ + ++ + +
Sbjct: 293 TTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVC 352
Query: 393 SQVKFNKQNGGYLVSSGY-DKKVNIFNDGNWIKERSLEGHLDKV--MSIDIVGPDIYSAG 449
S + ++K L S G+ ++ ++ + +K L GH +V M+ G + SA
Sbjct: 353 S-LLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAA 411
Query: 450 WDRSVNKWGV 459
D ++ W V
Sbjct: 412 GDETLRFWNV 421
Score = 55.8 bits (133), Expect = 1e-07
Identities = 36/153 (23%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 227 LDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDAR--FAQVRCHPCNSFIGSTSFD 284
LDW S N+ D + ++D+ +T +++ ++ + + P + +
Sbjct: 136 LDWG--SANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNN 193
Query: 285 KTWILIDTVKQAPI-LIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIM-S 342
L D+ + ++ GH + V SL+++N +++T G+D + + D+R I+ +
Sbjct: 194 SEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNH--ILTTGGMDGLIINNDVRIRSPIVET 251
Query: 343 LQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWD 375
+GH++ + + WS +G QLASG D + +WD
Sbjct: 252 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWD 284
>Hs17434629 [ABO] KOG1446 Histone H3 (Lys4) methyltransferase complex and RNA
cleavage factor II complex subunit SWD2
Length = 315
Score = 59.3 bits (142), Expect = 1e-08
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 11/172 (6%)
Query: 210 LSKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQV 269
+++++C S KI+ D+S + + + ++D IV+YD + + LY +
Sbjct: 13 VARVFCENS---DKINCFDFSPNGQTVISSSNDDSIVLYDCQEGKPKRTLYSKKYGVDLI 69
Query: 270 R-CHPCNSFI-GSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDA 327
R H N+ + S D T + I GHS V +LS + + LD
Sbjct: 70 RYTHEANTAVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDDIFISGSLDK 129
Query: 328 IALIWDIRSG--KNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIR 377
+WD+R+ + +MSLQG KP+ S D G LA+G +K++D+R
Sbjct: 130 TIRLWDLRAPNCQGLMSLQG--KPVCSFD--PEGLILAAGVNSEMVKLYDLR 177
>At5g50120 [R] KOG4155 FOG: WD40 repeat
Length = 388
Score = 59.3 bits (142), Expect = 1e-08
Identities = 46/168 (27%), Positives = 76/168 (44%), Gaps = 15/168 (8%)
Query: 304 HSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSL-QGHSKPIYSVDWSQNGYQL 362
H V L+ DG+L+ + D IW K + S H I +V S+NG +
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENG-DI 222
Query: 363 ASGSGDGTIKVW-------DIRKKGN---VETILAHNSIVSQVKFNKQNGGYLVSSGYDK 412
+GS D IKVW +++KK V + HNS ++ + + NG L S G D
Sbjct: 223 YTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSDG 282
Query: 413 KVNIF---NDGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRSVNKW 457
+ ++ + G+ + L GH + V+ + +V + S D++V W
Sbjct: 283 SILVWERDDGGDIVVVGMLRGHTESVLCLAVVSDILCSGSADKTVRLW 330
>SPBC713.05 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 297
Score = 58.9 bits (141), Expect = 2e-08
Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 5/152 (3%)
Query: 311 LSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGT 370
+ ++ G V AG + + +W+++SG I GH I +D + + AS GD
Sbjct: 20 VKYNRTGKYVLAAGNERVVRLWNVKSGACIHEYAGHGHEILDLDLVYDSTKFASCGGDKF 79
Query: 371 IKVWDIRKKGNVETIL-AHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN--DGNWIKERS 427
I+VWD+ G V+ L H + ++ +++N ++ L S +D KV +++ ++ +
Sbjct: 80 IQVWDV-NTGKVDRRLGGHLAQINTIRYN-EDSSILASGSFDSKVRLWDCRSNSFSPIQV 137
Query: 428 LEGHLDKVMSIDIVGPDIYSAGWDRSVNKWGV 459
L D V SIDI I + D ++ + +
Sbjct: 138 LADAKDSVSSIDIAEHLIVTGSTDGTLRTYDI 169
Score = 52.4 bits (124), Expect = 1e-06
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH E+ L D + ++ G D +WD+ +GK L GH I ++ ++++ L
Sbjct: 54 GHGHEILDLDLVYDSTKFASCGGDKFIQVWDVNTGKVDRRLGGHLAQINTIRYNEDSSIL 113
Query: 363 ASGSGDGTIKVWDIR 377
ASGS D +++WD R
Sbjct: 114 ASGSFDSKVRLWDCR 128
>Hs5032027 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 425
Score = 58.9 bits (141), Expect = 2e-08
Identities = 46/140 (32%), Positives = 71/140 (49%), Gaps = 20/140 (14%)
Query: 303 GHSAEVFSLSFHN-DGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVD------- 354
GH+A V +S+H SL + D +IWD RS SKP +SVD
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT-------SKPSHSVDAHTAEVN 277
Query: 355 -WSQNGYQ---LASGSGDGTIKVWDIRK-KGNVETILAHNSIVSQVKFNKQNGGYLVSSG 409
S N Y LA+GS D T+ +WD+R K + + +H + QV+++ N L SSG
Sbjct: 278 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG 337
Query: 410 YDKKVNIFNDGNWIKERSLE 429
D+++N+++ +E+S E
Sbjct: 338 TDRRLNVWDLSKIGEEQSPE 357
>Hs13899346 [R] KOG0302 Ribosome Assembly protein
Length = 446
Score = 58.9 bits (141), Expect = 2e-08
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 11/130 (8%)
Query: 293 VKQAPILIQEGHSAEVFSLSFH-NDGSLVSTAGLDAIALIWDIRSGKN----IMSLQGHS 347
V Q P + GH+ V L + + ++ ++ DA IWDIR+ + + + H
Sbjct: 252 VDQRPFV---GHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHD 308
Query: 348 KPIYSVDWSQNGYQLASGSGDGTIKVWDIR--KKGN-VETILAHNSIVSQVKFNKQNGGY 404
+ + WS+ L SG DG +K+WD+R K G+ V T H + V+ V+++ Q+ G
Sbjct: 309 GDVNVISWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGV 368
Query: 405 LVSSGYDKKV 414
+SG D ++
Sbjct: 369 FAASGADHQI 378
>CE03924 [Z] KOG0318 WD40 repeat stress protein/actin interacting protein
Length = 611
Score = 58.9 bits (141), Expect = 2e-08
Identities = 68/295 (23%), Positives = 116/295 (39%), Gaps = 30/295 (10%)
Query: 187 TSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLS--GTKISGLDWSVDSKNIFVCTHD-- 242
TSP G A G GN+ + D + + ++ + + W +SK I
Sbjct: 67 TSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRE 126
Query: 243 --GRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSF-IGSTSFDKTWILIDTVKQAPIL 299
G + ++D+G T+ L V P F I S S D T + +
Sbjct: 127 RFGHVFLFDTG--TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKS 184
Query: 300 IQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQ-------GHSKPIYS 352
H+ V S+ ++ DGSL ++ G D ++++ G + HS ++
Sbjct: 185 TFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFG 244
Query: 353 VDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGY------LV 406
+ WS +G ++AS S D TIK+W NV T+ +I + Q G LV
Sbjct: 245 LTWSPDGTKIASASADKTIKIW------NVATLKVEKTIPVGTRIEDQQLGIIWTKQALV 298
Query: 407 SSGYDKKVNIFNDGNWIKERSLEGHLDKV--MSIDIVGPDIYSAGWDRSVNKWGV 459
S + +N N ++ GH + +S G ++SA + +N W +
Sbjct: 299 SISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDI 353
Score = 56.6 bits (135), Expect = 8e-08
Identities = 64/259 (24%), Positives = 108/259 (40%), Gaps = 42/259 (16%)
Query: 182 ISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKIS---GLDWSVDSKNIFV 238
I+ I T+ GDL SW +L +V S + +++++ S GL S D +I V
Sbjct: 370 ITGIKTTSKGDLFTV-SWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADG-DIAV 427
Query: 239 CTHDGRIVIYDSGDETTVKILYK-------NDARFAQV-----RCHPCNSFIGSTSFDKT 286
I IY G T V I Y ND +F V + H S S KT
Sbjct: 428 AACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT 487
Query: 287 WILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQG- 345
+ H AE+ S++F N+G+ + + + + + +
Sbjct: 488 IV---------------HPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSW 532
Query: 346 --HSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETIL----AHNSIVSQVKFNK 399
H+ + V WS + +LA+GS D ++ VW++ K + I+ A +S+ S + N+
Sbjct: 533 TFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNE 592
Query: 400 QNGGYLVSSGYDKKVNIFN 418
+VS+G D + +N
Sbjct: 593 TT---IVSAGQDSNIKFWN 608
>At5g54520 [S] KOG0282 mRNA splicing factor
Length = 404
Score = 58.9 bits (141), Expect = 2e-08
Identities = 40/126 (31%), Positives = 66/126 (51%), Gaps = 10/126 (7%)
Query: 341 MSLQGHSKPIYSVDWSQNGYQLASGSG-DGTIKVWDI--RKKGNVETILAHNSIVSQVKF 397
+SL GH+K + ++DWS + L + +G DG + VW++ K V L HN+ V VK+
Sbjct: 101 ISLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKW 160
Query: 398 NKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPD----IYSAGWDRS 453
+KQ G L+S GYD +F+ ++ +S + D+V+ + PD S G S
Sbjct: 161 SKQ-GLSLLSCGYDCTSRLFDVERGVETQSFKE--DEVVGVVKFHPDNCNVFLSGGSKGS 217
Query: 454 VNKWGV 459
+ W +
Sbjct: 218 LRLWDI 223
>SPAC4D7.05 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 328
Score = 58.5 bits (140), Expect = 2e-08
Identities = 32/125 (25%), Positives = 67/125 (53%), Gaps = 6/125 (4%)
Query: 297 PILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWS 356
PI++Q GH + + +++DG L+ + D + +W +G+ + + +GH+ I++ D +
Sbjct: 3 PIILQ-GHERPLTQIKYNHDGDLLFSCAKDKVINVWFSHNGERLGTYEGHTGAIWTCDIN 61
Query: 357 QNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSS----GYDK 412
++ + SG+ D T+++WD+ K G + V +V+FN+ + L + GY
Sbjct: 62 KSSTLMVSGAADNTMRLWDV-KTGKQLYKWEFPTAVKRVEFNEDDTRILAVTEERMGYAG 120
Query: 413 KVNIF 417
V +F
Sbjct: 121 TVTVF 125
>ECU08g1110 [T] KOG0279 G protein beta subunit-like protein
Length = 334
Score = 58.5 bits (140), Expect = 2e-08
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 299 LIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQN 358
L GHS + L DG+++ T G D I IWD S K+I+ L+GH + + V + N
Sbjct: 61 LYDGGHSKRINGLDVSKDGNMMVTVGSDGIGRIWDTESKKSIL-LEGHGRDVLCVSINSN 119
Query: 359 GYQLASGSGDGTIKVW----DIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKV 414
++ +GS D T+ ++ D+ K + + H ++ V F+ L S D V
Sbjct: 120 DTKIVTGSVDRTMNLYNTKGDLVLKMGRDMEMMHRGWINCVTFHPTEESILASGSADGTV 179
Query: 415 NIFN 418
I++
Sbjct: 180 KIWD 183
>At2g21390 [U] KOG0292 Vesicle coat complex COPI alpha subunit
Length = 1218
Score = 58.5 bits (140), Expect = 2e-08
Identities = 43/160 (26%), Positives = 70/160 (42%), Gaps = 3/160 (1%)
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
E S V LSFH + + + +WD R G I H P+ V + +
Sbjct: 6 ETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPL 65
Query: 362 LASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGN 421
SG D IKVW+ + + T+L H + V+F+ +N ++VS+ D+ + I+N +
Sbjct: 66 FVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHEN-PWIVSASDDQTIRIWNWQS 124
Query: 422 WIKERSLEGHLDKVMSIDIVGPD--IYSAGWDRSVNKWGV 459
L GH VM + + SA D++V W +
Sbjct: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 55.5 bits (132), Expect = 2e-07
Identities = 39/162 (24%), Positives = 73/162 (44%), Gaps = 13/162 (8%)
Query: 304 HSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLA 363
H V + FHN L + G D +W+ ++ + + +L GH I +V + +
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIV 109
Query: 364 SGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWI 423
S S D TI++W+ + + + + HN V F+ + +VS+ D+ V +++ G +
Sbjct: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGA-L 167
Query: 424 KERSLEGHLDKVMSIDIVGPDIYSA----------GWDRSVN 455
K++S D +M + D++ G DR VN
Sbjct: 168 KKKS-ASPADDLMRFSQMNSDLFGGVDAIVKYVLEGHDRGVN 208
>7292122 [U] KOG0292 Vesicle coat complex COPI alpha subunit
Length = 1234
Score = 58.5 bits (140), Expect = 2e-08
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 9/163 (5%)
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
E SA V LSFH + + + +WD R + H P+ V + Q
Sbjct: 6 ESKSARVKGLSFHPKRPWILVSLHSGVIQLWDYRMHTLLEKFDEHDGPVRGVAFHQQMPL 65
Query: 362 LASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGN 421
SG D IKVW+ +++ + T+LAH V V F+ + +++S+ D+ + I+ N
Sbjct: 66 FVSGGDDYKIKVWNYKQRRCIFTLLAHLDYVRTVAFHHEY-PWILSASDDQTIRIW---N 121
Query: 422 WIKERS---LEGHLDKVMSIDI--VGPDIYSAGWDRSVNKWGV 459
W L GH VM I SA D++V W +
Sbjct: 122 WQSRNCICVLTGHNHYVMCAQFHPTEDQIVSASLDQTVRVWDI 164
>Hs4885105 [BL] KOG1009 Chromatin assembly complex 1 subunit B/CAC2 (contains
WD40 repeats)
Length = 559
Score = 58.2 bits (139), Expect = 3e-08
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 285 KTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQ 344
+ W ++ T++ GH +V+ + + DG+L+++A +D A+IWD+ G+ I
Sbjct: 117 ENWTVVKTLR--------GHLEDVYDICWATDGNLMASASVDNTAIIWDVSKGQKISIFN 168
Query: 345 GHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKK 379
H + V W G +A+ S D ++V+ I+KK
Sbjct: 169 EHKSYVQGVTWDPLGQYVATLSCDRVLRVYSIQKK 203
Score = 57.4 bits (137), Expect = 4e-08
Identities = 34/155 (21%), Positives = 72/155 (45%), Gaps = 26/155 (16%)
Query: 304 HSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKN---------------------IMS 342
H+ V + F G ++++ G DA+ L+W + K + +
Sbjct: 65 HTKAVNVVRFSPTGEILASGGDDAVILLWKVNDNKEPEQIAFQDEDEAQLNKENWTVVKT 124
Query: 343 LQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNG 402
L+GH + +Y + W+ +G +AS S D T +WD+ K + H S V V ++ G
Sbjct: 125 LRGHLEDVYDICWATDGNLMASASVDNTAIIWDVSKGQKISIFNEHKSYVQGVTWDPL-G 183
Query: 403 GYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMS 437
Y+ + D+ + +++ I+++ + ++ K++S
Sbjct: 184 QYVATLSCDRVLRVYS----IQKKRVAFNVSKMLS 214
>Hs19705568 [R] KOG0288 WD40 repeat protein TipD
Length = 293
Score = 58.2 bits (139), Expect = 3e-08
Identities = 38/138 (27%), Positives = 74/138 (53%), Gaps = 5/138 (3%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
G +A + S+ F + GS + A D + IW + + +L GHS + S + + ++
Sbjct: 23 GSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARI 82
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNW 422
SGS D T+K+WD+R K ++T+ A +S + + +Q ++S +DKK+ ++ +
Sbjct: 83 VSGSHDRTLKLWDLRSKVCIKTVFAGSS-CNDIVCTEQ---CVMSGHFDKKIRFWDIRSE 138
Query: 423 IKERSLEGHLDKVMSIDI 440
R +E L K+ ++D+
Sbjct: 139 SIVREME-LLGKITALDL 155
>Hs14150114 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 315
Score = 58.2 bits (139), Expect = 3e-08
Identities = 40/155 (25%), Positives = 69/155 (43%), Gaps = 13/155 (8%)
Query: 244 RIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEG 303
R+ D G + + D + C C S DKT L + ++ + G
Sbjct: 17 RLKTLDCGQGAVRAVRFNVDGNY----CLTCGS-------DKTLKLWNPLRGTLLRTYSG 65
Query: 304 HSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLA 363
H EV + D S + + G D ++WD+ SG+ + +GH+ + +V +++ +
Sbjct: 66 HGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVIL 125
Query: 364 SGSGDGTIKVWDIRKK--GNVETILAHNSIVSQVK 396
SGS D +I+ WD R + V+T+ VS VK
Sbjct: 126 SGSIDSSIRCWDCRSRRPEPVQTLDEARDGVSSVK 160
Score = 50.8 bits (120), Expect = 4e-06
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 3/152 (1%)
Query: 308 VFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSG 367
V ++ F+ DG+ T G D +W+ G + + GH + S + L SG G
Sbjct: 28 VRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSSLCSGGG 87
Query: 368 DGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKE-- 425
D + +WD+ V H V+ V+FN++ ++S D + ++ + E
Sbjct: 88 DKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEE-ATVILSGSIDSSIRCWDCRSRRPEPV 146
Query: 426 RSLEGHLDKVMSIDIVGPDIYSAGWDRSVNKW 457
++L+ D V S+ + +I + D V ++
Sbjct: 147 QTLDEARDGVSSVKVSDHEILAGSVDGRVRRY 178
>CE18408 [R] KOG4155 FOG: WD40 repeat
Length = 1101
Score = 58.2 bits (139), Expect = 3e-08
Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
Query: 275 NSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDI 334
+S STSFDKT + + P + H+A+V +D + TA D+ A + +
Sbjct: 432 SSLFVSTSFDKTVNVWVFSQSTPTMSLTHHTAKVTCAILTSDDQYLITASADSSAKMIKL 491
Query: 335 RSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQ 394
+G+ + S H+ + S+ + N L +GSGD +++WD+ + + + VS
Sbjct: 492 ETGEVMRSFNDHTGSVVSLQLTSNNQFLITGSGDFVVQMWDVTNGKCISRMGGLMAPVST 551
Query: 395 VKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSI 438
+ N ++V + D+ + +F+ + L GH KV S+
Sbjct: 552 LAIT-SNDAFVVVACEDETLKVFSTVGGQELHELMGHEGKVNSL 594
>YNL006w [R] KOG0315 G-protein beta subunit-like protein (contains WD40
repeats)
Length = 303
Score = 57.8 bits (138), Expect = 3e-08
Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Query: 306 AEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKN--IMSLQGHSKPIYSVDWSQNGYQLA 363
++V L ND L++TAG + L +DIR+ + S +GH + SV + Q+ +
Sbjct: 33 SQVNRLEITNDKKLLATAGHQNVRL-YDIRTTNPNPVASFEGHRGNVTSVSFQQDNRWMV 91
Query: 364 SGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDG 420
+ S DGTIKVWD+R ++ HN+ V++V + N G L+S D + I++ G
Sbjct: 92 TSSEDGTIKVWDVRSP-SIPRNYKHNAPVNEVVIH-PNQGELISCDRDGNIRIWDLG 146
Score = 51.6 bits (122), Expect = 2e-06
Identities = 29/87 (33%), Positives = 42/87 (47%), Gaps = 1/87 (1%)
Query: 290 IDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKP 349
I T P+ EGH V S+SF D + T+ D +WD+RS +I H+ P
Sbjct: 60 IRTTNPNPVASFEGHRGNVTSVSFQQDNRWMVTSSEDGTIKVWDVRS-PSIPRNYKHNAP 118
Query: 350 IYSVDWSQNGYQLASGSGDGTIKVWDI 376
+ V N +L S DG I++WD+
Sbjct: 119 VNEVVIHPNQGELISCDRDGNIRIWDL 145
>Hs4506439 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 425
Score = 57.8 bits (138), Expect = 3e-08
Identities = 46/140 (32%), Positives = 69/140 (48%), Gaps = 20/140 (14%)
Query: 303 GHSAEVFSLSFHN-DGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVD------- 354
GHSA V +++H SL + D +IWD RS SKP + VD
Sbjct: 224 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTT-------SKPSHLVDAHTAEVN 276
Query: 355 -WSQNGYQ---LASGSGDGTIKVWDIRK-KGNVETILAHNSIVSQVKFNKQNGGYLVSSG 409
S N Y LA+GS D T+ +WD+R K + T +H + QV ++ N L SSG
Sbjct: 277 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSG 336
Query: 410 YDKKVNIFNDGNWIKERSLE 429
D+++N+++ +E+S E
Sbjct: 337 TDRRLNVWDLSKIGEEQSAE 356
>CE20751 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 683
Score = 57.8 bits (138), Expect = 3e-08
Identities = 64/253 (25%), Positives = 114/253 (44%), Gaps = 29/253 (11%)
Query: 228 DWSVDSKNIFVCTHDGRIVIYDSGDETTVKIL-YKNDARFAQVRC-------------HP 273
DW D + +C H G+I+I S D TTVK+ + D + + C P
Sbjct: 91 DWVND---MILCGH-GKILISASND-TTVKVWNIERDNKHGFIDCIRTHKDYVSCLAYAP 145
Query: 274 CNSFIGSTSFDKTWILID---TVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIAL 330
S SFD + D K LI G ++SL+ + SLV AG +
Sbjct: 146 IVEKAVSASFDHNIFVYDINANFKTVNNLI--GCKDSIYSLATTPNLSLVLGAGTEKCIR 203
Query: 331 IWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNS 390
++D R+ + IM L+GH+ + ++ + +G + S D TI++WDI ++ + T +AH
Sbjct: 204 LFDPRTNEKIMKLRGHTDNVRALVVNDDGTRALSAGSDATIRLWDIGQQRCIATCIAHEE 263
Query: 391 IVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSL---EGHLDKVMSIDIVGP-DIY 446
V ++ + + + S+G DK V ++ K + L E + K++ + P ++
Sbjct: 264 GVWTLQVD-SSFTTVYSAGKDKMVVKTPLYDFTKSQLLFKEEAPVKKLLLSEKDNPVSLW 322
Query: 447 SAGWDRSVNKWGV 459
W + +W +
Sbjct: 323 VGTWKSDIKRWSI 335
>CE16234 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 417
Score = 57.8 bits (138), Expect = 3e-08
Identities = 36/132 (27%), Positives = 74/132 (55%), Gaps = 5/132 (3%)
Query: 302 EGHSAEVFSLSFH--NDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQ-N 358
+GH + V +++H +DG + + G D LIWD+R+ + HS + + ++ +
Sbjct: 219 KGHESVVEDVAWHVLHDG-VFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYS 277
Query: 359 GYQLASGSGDGTIKVWDIRK-KGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIF 417
+ LA+GS D T+ +WD+R + + + +H + QV+++ N L SSG DK+++++
Sbjct: 278 EFILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVW 337
Query: 418 NDGNWIKERSLE 429
+ +++S E
Sbjct: 338 DLSKIGEDQSAE 349
Score = 56.2 bits (134), Expect = 1e-07
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 13/174 (7%)
Query: 297 PILIQEGHSAEVFSLSFH-NDGSLVSTAGLDAIALIWDIRSGKNIMS-------LQGHSK 348
P++ +GH+ E + LS++ N L+ +A D WDI + +N+ +GH
Sbjct: 164 PLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHES 223
Query: 349 PIYSVDWSQ-NGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVS 407
+ V W + S D + +WD+R I AH++ V+ + FN + L +
Sbjct: 224 VVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILAT 283
Query: 408 SGYDKKVNIFNDGNW-IKERSLEGHLDKVMSIDIVGPD---IYSAGWDRSVNKW 457
DK V +++ N +K S E H D++ + + + S+G D+ ++ W
Sbjct: 284 GSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVW 337
Score = 55.8 bits (133), Expect = 1e-07
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 12/167 (7%)
Query: 226 GLDWSVDSKNIFVCTHDGRIVIY-------DSGDETTVKILYK-NDARFAQVRCHPCNSF 277
GL W+ + + + + D + V + + E K ++K +++ V H +
Sbjct: 177 GLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDG 236
Query: 278 I-GSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGS-LVSTAGLDAIALIWDIR 335
+ GS DK ++ D P + HSAEV L+F+ +++T D +WD+R
Sbjct: 237 VFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLR 296
Query: 336 SGK-NIMSLQGHSKPIYSVDWS-QNGYQLASGSGDGTIKVWDIRKKG 380
+ + + S + H I+ V WS N LAS D + VWD+ K G
Sbjct: 297 NLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIG 343
>CE03286 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 686
Score = 57.8 bits (138), Expect = 3e-08
Identities = 64/253 (25%), Positives = 114/253 (44%), Gaps = 29/253 (11%)
Query: 228 DWSVDSKNIFVCTHDGRIVIYDSGDETTVKIL-YKNDARFAQVRC-------------HP 273
DW D + +C H G+I+I S D TTVK+ + D + + C P
Sbjct: 91 DWVND---MILCGH-GKILISASND-TTVKVWNIERDNKHGFIDCIRTHKDYVSCLAYAP 145
Query: 274 CNSFIGSTSFDKTWILID---TVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIAL 330
S SFD + D K LI G ++SL+ + SLV AG +
Sbjct: 146 IVEKAVSASFDHNIFVYDINANFKTVNNLI--GCKDSIYSLATTPNLSLVLGAGTEKCIR 203
Query: 331 IWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNS 390
++D R+ + IM L+GH+ + ++ + +G + S D TI++WDI ++ + T +AH
Sbjct: 204 LFDPRTNEKIMKLRGHTDNVRALVVNDDGTRALSAGSDATIRLWDIGQQRCIATCIAHEE 263
Query: 391 IVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSL---EGHLDKVMSIDIVGP-DIY 446
V ++ + + + S+G DK V ++ K + L E + K++ + P ++
Sbjct: 264 GVWTLQVD-SSFTTVYSAGKDKMVVKTPLYDFTKSQLLFKEEAPVKKLLLSEKDNPVSLW 322
Query: 447 SAGWDRSVNKWGV 459
W + +W +
Sbjct: 323 VGTWKSDIKRWSI 335
>At4g34460 [R] KOG0286 G-protein beta subunit
Length = 377
Score = 57.8 bits (138), Expect = 3e-08
Identities = 47/197 (23%), Positives = 88/197 (43%), Gaps = 21/197 (10%)
Query: 280 STSFDKTWILIDTVKQAPILI-----QEGHSAEVFSLSFHNDGSLVSTAG-LDAIALIWD 333
++S D+T IL D + Q GH+A+V S+S +G D+ A +WD
Sbjct: 174 TSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWD 233
Query: 334 IRSGKN-IMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAH---- 388
R+ + + GH + +V + +GY+ +GS DGT +++DIR ++ H
Sbjct: 234 TRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGE 293
Query: 389 NSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSL------EGHLDKV--MSIDI 440
N V+ + F+ G L+ +GY + + E L + H +++ + +
Sbjct: 294 NGPVTSIAFSV--SGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSA 351
Query: 441 VGPDIYSAGWDRSVNKW 457
G + + WD ++ W
Sbjct: 352 DGSALCTGSWDSNLKIW 368
Score = 55.1 bits (131), Expect = 2e-07
Identities = 58/219 (26%), Positives = 92/219 (41%), Gaps = 25/219 (11%)
Query: 213 IYCNRSLSGT--KISGLDWSVDSKNIFVCTHDGRIVIYD---SGDETTVKI--LYKNDAR 265
+ C R+L G K+ LDW+ + I + DGR+++++ S +K+ +
Sbjct: 55 LVCCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCA 114
Query: 266 FA----QVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSF--HNDGSL 319
F+ V C +S S T TV + +L GH V + + D L
Sbjct: 115 FSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRML--TGHRGYVSCCQYVPNEDAHL 172
Query: 320 VSTAGLDAIALIWDIRSGKNIMSL-----QGHSKPIYSVDWS-QNGYQLASGSGDGTIKV 373
++++G D ++WD+ +G GH+ + SV S N SGS D T ++
Sbjct: 173 ITSSG-DQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARL 231
Query: 374 WDIRKKGN-VETILAHNSIVSQVKFNKQNGGYLVSSGYD 411
WD R V T H V+ VKF GY +G D
Sbjct: 232 WDTRAASRAVRTFHGHEGDVNTVKFFPD--GYRFGTGSD 268
>At1g15440 [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 900
Score = 57.8 bits (138), Expect = 3e-08
Identities = 40/126 (31%), Positives = 65/126 (50%), Gaps = 4/126 (3%)
Query: 310 SLSFHNDGSLVSTAGLDAIAL-IWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGD 368
SL+ G +V LD+ + +W ++G+ L GH P++ + +S LAS S D
Sbjct: 479 SLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWD 538
Query: 369 GTIKVWDI-RKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERS 427
T+++WD+ KG VET HN V V F + +G L SS D ++N ++ + +
Sbjct: 539 YTVRLWDVFASKGTVET-FRHNHDVLTVAF-RPDGKQLASSTLDGQINFWDTIEGVLMYT 596
Query: 428 LEGHLD 433
+EG D
Sbjct: 597 IEGRRD 602
Score = 57.0 bits (136), Expect = 6e-08
Identities = 42/169 (24%), Positives = 74/169 (42%), Gaps = 11/169 (6%)
Query: 298 ILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQ 357
IL Q+GH +V +++ D L++T D +W++ SG ++ H+ + ++ +
Sbjct: 382 ILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMA 441
Query: 358 NGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIF 417
+ + L S S DGT++ WD ++ N +T V G +V +G IF
Sbjct: 442 DNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTP-RQFVSLTADPSGDVVCAGTLDSFEIF 500
Query: 418 NDGNWIKERS-----LEGHLDKV--MSIDIVGPDIYSAGWDRSVNKWGV 459
W K+ L GH V + + + S+ WD +V W V
Sbjct: 501 ---VWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDV 546
Score = 55.5 bits (132), Expect = 2e-07
Identities = 42/193 (21%), Positives = 79/193 (40%), Gaps = 2/193 (1%)
Query: 185 INTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGR 244
+ SP L+A G+ + + + + + ++ L + D+ ++ + DG
Sbjct: 395 VTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGT 454
Query: 245 IVIYDSGDETTVKILYKNDAR-FAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPIL-IQE 302
+ +D K R F + P + + + D I + + K I I
Sbjct: 455 VRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILS 514
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH A V L F L++++ D +WD+ + K + H+ + +V + +G QL
Sbjct: 515 GHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQL 574
Query: 363 ASGSGDGTIKVWD 375
AS + DG I WD
Sbjct: 575 ASSTLDGQINFWD 587
>7299974 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 430
Score = 57.8 bits (138), Expect = 3e-08
Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 27/175 (15%)
Query: 275 NSFIGSTSFDKT---WILIDTVKQAPIL----IQEGHSAEVFSLSFHN-DGSLVSTAGLD 326
N ++ S S D T W + T K+ ++ I GH+A V +++H SL + D
Sbjct: 194 NGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD 253
Query: 327 AIALIWDIRSGKNIMSLQGHSKPIYSVD--------WSQNGYQ---LASGSGDGTIKVWD 375
+IWD R+ SKP ++VD S N Y LA+GS D T+ +WD
Sbjct: 254 QKLMIWDTRNNNT-------SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 306
Query: 376 IRK-KGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLE 429
+R K + + +H + QV+++ N L SSG D+++++++ +E+S E
Sbjct: 307 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 361
>SPCC16A11.02 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 181
Score = 57.4 bits (137), Expect = 4e-08
Identities = 29/112 (25%), Positives = 55/112 (48%)
Query: 300 IQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNG 359
I++ V +L+ +D + A + I++I SG+ I S++ H P+ ++
Sbjct: 56 IKKDEDDYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTN 115
Query: 360 YQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYD 411
LA+G +G +KVWDI + H ++S + F K ++++SG D
Sbjct: 116 TLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGAD 167
>SPAC9G1.05 [Z] KOG0318 WD40 repeat stress protein/actin interacting protein
Length = 595
Score = 57.4 bits (137), Expect = 4e-08
Identities = 66/294 (22%), Positives = 121/294 (40%), Gaps = 24/294 (8%)
Query: 181 PISEINTSPGGDLMACGSWSGNLSLVDNS-LSKIYCNR--SLSGTKISGLDWSVDSKNIF 237
P + SP G +A G GN+ + D + KI N+ ++SG +I+ LDW DS+ I
Sbjct: 60 PTTVARFSPSGYYVASGDNQGNVRIWDCAGEDKILKNQVTAISG-RITDLDWDGDSQRII 118
Query: 238 VCTHD----GRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTV 293
G DSG+ +V ++ + + V F +T+ D I+
Sbjct: 119 AVGEGKERYGHAFTADSGN--SVGEIFGHSSVVNAVSLRKSRPFRAATASDDN--SINFF 174
Query: 294 KQAPILIQEG---HSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPI 350
P HS V+ + + + ++AG D ++D ++G + + H I
Sbjct: 175 HGTPYRFNRSLRVHSKFVYDVRYSPNDERFASAGADGKVYVFDGKTGDQVYEIDAHKGSI 234
Query: 351 YSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHN--SIVSQVKFNKQNGGYLVSS 408
+S+ WS + Q + S + K+WD + L+ + +V V K + S
Sbjct: 235 FSISWSPDSSQFVTSSAGYSCKIWDANTGSLIREWLSSDKKQLVGTVWPTKDLIIVVNSK 294
Query: 409 GYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPD---IYSAGWDRSVNKWGV 459
G + N + ++ GH + ++ + PD Y+A +D +V W +
Sbjct: 295 G---NLTYLNPSDCKVIDTIYGH-QRSITAATLSPDATHFYTASYDGTVLSWDI 344
>SPAC25H1.08c [S] KOG0296 Angio-associated migratory cell protein (contains WD40
repeats)
Length = 399
Score = 57.4 bits (137), Expect = 4e-08
Identities = 32/107 (29%), Positives = 55/107 (50%), Gaps = 3/107 (2%)
Query: 304 HSAEVFSLSFHN-DGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
H VFS+S + +L ++ G D + IWDI +G+ I L GH I ++DWS +G +
Sbjct: 60 HKDSVFSVSINPVHSNLCASGGGDDLGYIWDITTGEQICQLTGHKDSIVAIDWSFDGTYI 119
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSG 409
A+G D +++W + E I A ++ V + G +++G
Sbjct: 120 ATGGMDSQVRLW--KSSTGFEFITAFETVDEIVWLSWHPKGLFLAAG 164
Score = 49.7 bits (117), Expect = 9e-06
Identities = 24/95 (25%), Positives = 46/95 (48%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL 362
GH + ++ + DG+ ++T G+D+ +W +G ++ I + W G L
Sbjct: 102 GHKDSIVAIDWSFDGTYIATGGMDSQVRLWKSSTGFEFITAFETVDEIVWLSWHPKGLFL 161
Query: 363 ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKF 397
A+G DG+I +W + V+ + H + V+ KF
Sbjct: 162 AAGCNDGSIWMWSLPSGKVVQVMYGHTAPVNAGKF 196
>Hs7656991 [Z] KOG0303 Actin-binding protein Coronin contains WD40 repeats
Length = 474
Score = 57.4 bits (137), Expect = 4e-08
Identities = 29/85 (34%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 297 PILIQEGHSAEVFSLSFHNDG-SLVSTAGLDAIALIWDIRSGKNIMSLQG-HSKPIYSVD 354
P++I EGHS V +++H +++ +AG D +IW++ +G+ +++L HS IY+V
Sbjct: 122 PVVILEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVS 181
Query: 355 WSQNGYQLASGSGDGTIKVWDIRKK 379
W++NG + + S D ++V D RK+
Sbjct: 182 WNRNGSLICTASKDKKVRVIDPRKQ 206
>Hs18599374 [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 423
Score = 57.4 bits (137), Expect = 4e-08
Identities = 44/149 (29%), Positives = 76/149 (50%), Gaps = 6/149 (4%)
Query: 295 QAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVD 354
+ PI+ GH V S+ + +D + +A D +WD+ SG +L G+ K +
Sbjct: 247 RTPIVTLSGHMEAVSSVLW-SDAEEICSASWDHTIRVWDVESGSLKSTLTGN-KVFNCIS 304
Query: 355 WSQNGYQLASGSGDGTIKVWDIR-KKGNVE--TILAHNSIVSQVKFNKQNGGYLVSSGYD 411
+S +LASGS D I++WD R K G++ ++ +H V+ VK++ + L+S D
Sbjct: 305 YSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLD 364
Query: 412 KKVNIFNDGNW-IKERSLEGHLDKVMSID 439
V +++ + L H DKV+S+D
Sbjct: 365 NIVKLWDTRSCKAPLYDLAAHEDKVLSVD 393
>ECU05g0220 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 781
Score = 57.4 bits (137), Expect = 4e-08
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 9/158 (5%)
Query: 278 IGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSG 337
+GS + W D V ++ H E+ + + + L++T D A I D G
Sbjct: 471 VGSDQILQIWDYRDNV-----FMERIHDKEINGVEINEERKLIATCSQDKNAKILDFE-G 524
Query: 338 KNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKF 397
+ + L GH+K ++ V + +N +A+ S D T+K+W I T+ H S V + +F
Sbjct: 525 RVLHVLSGHTKGVWCVSFGKN--LMATCSADTTVKIWKIETFECTGTLSGHRSAVLKAQF 582
Query: 398 NKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKV 435
+ N LVS ++ ++N I E +L+ H D+V
Sbjct: 583 YR-NDEKLVSGCATGEMKVWNVKKKICEMNLDVHRDRV 619
Score = 57.0 bits (136), Expect = 6e-08
Identities = 49/205 (23%), Positives = 93/205 (44%), Gaps = 15/205 (7%)
Query: 185 INTSPGGDLMACGS-------WSGNLSLVDNSLSKIYCNRSLSGTK--ISGLDWSVDSKN 235
++ S GD + GS W +L +N K + ++ + + G++ V +
Sbjct: 407 MSLSISGDFLMTGSRDKKAILWKISLRDAENGQEKSLSLKMINTLENSLGGINGCVLGAS 466
Query: 236 IFVCTHDGRIV-IYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVK 294
IFV +I+ I+D D ++ ++ D V + I + S DK ++D
Sbjct: 467 IFVLVGSDQILQIWDYRDNVFMERIH--DKEINGVEINEERKLIATCSQDKNAKILDFEG 524
Query: 295 QAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVD 354
+ + + GH+ V+ +SF + L++T D IW I + + +L GH +
Sbjct: 525 RV-LHVLSGHTKGVWCVSFGKN--LMATCSADTTVKIWKIETFECTGTLSGHRSAVLKAQ 581
Query: 355 WSQNGYQLASGSGDGTIKVWDIRKK 379
+ +N +L SG G +KVW+++KK
Sbjct: 582 FYRNDEKLVSGCATGEMKVWNVKKK 606
>CE23942 [A] KOG0299 U3 snoRNP-associated protein (contains WD40 repeats)
Length = 550
Score = 57.4 bits (137), Expect = 4e-08
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 18/167 (10%)
Query: 229 WSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWI 288
+S D+K + C + IV ++ G V I+ + R A V P N+ G
Sbjct: 148 FSPDAKYVISCGKESSIVKFNVGTRKVVGIIKRTKKR-AGVPEEPTNAHYG--------- 197
Query: 289 LIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSK 348
+I TV +P + F S D + + + + IW+ S ++I L GH
Sbjct: 198 VIFTVAVSP--------DQKFIASGGFDQVVKAPKNMKILFQIWNFDSLEHIKDLSGHRG 249
Query: 349 PIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQV 395
PI+S+ + L S S D ++K+WDI + G V+T+ H V Q+
Sbjct: 250 PIFSLTFQLKTNNLYSASQDRSVKMWDIDQLGLVDTMYGHQDGVQQI 296
>7301145 [R] KOG0644 Uncharacterized conserved protein contains WD40 repeat
and BROMO domains
Length = 1225
Score = 57.4 bits (137), Expect = 4e-08
Identities = 50/209 (23%), Positives = 91/209 (42%), Gaps = 36/209 (17%)
Query: 213 IYCNRSLSG--TKISGLDWSVDSKNIFVCTH--DGRIVIYDSGDETTVKILYKNDARFAQ 268
+YC+RSL T+++G+ S+ + TH D + + G E K+L D
Sbjct: 116 VYCHRSLRDYCTRLNGV--SLPDSVLTKPTHNLDRVLTGREHGGEVRRKLLVPTDL---- 169
Query: 269 VRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAI 328
+ +T +L TV GH + V+ + F G + T D +
Sbjct: 170 --------------YRRTKLLRRTV---------GHLSSVYCVLFDRTGRYIITGADDLL 206
Query: 329 ALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAH 388
IW G+ + +L+G S I + + + LA+GS D ++VWD++ + + AH
Sbjct: 207 IKIWSAADGRLLATLRGASSEITDIAINLDNTMLAAGSLDHILRVWDMQTTSPIAVLSAH 266
Query: 389 NSIVSQVKF---NKQNGGYLVSSGYDKKV 414
+++ V F + + YLV++ D +
Sbjct: 267 TGMITSVNFCPSPRSDLKYLVTTSTDGSI 295
>7300370 [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 922
Score = 57.4 bits (137), Expect = 4e-08
Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 3/149 (2%)
Query: 308 VFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSG 367
V L+ D ++ LDA ++ + + K +SL GH P+ +D S + + +GS
Sbjct: 542 VLCLAVSPDMKYLAVGLLDATVKVFFLDTFKFYLSLYGHKLPVICLDISYDSNLIVTGSA 601
Query: 368 DGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERS 427
D +KVW + +I AH+ V V+F + + + G D KV ++ N+ K +
Sbjct: 602 DRNVKVWGLNFGDCHRSIFAHDDSVMSVQFIPRTHMFF-TCGKDGKVKQWDGDNFEKILT 660
Query: 428 LEGHLDKV--MSIDIVGPDIYSAGWDRSV 454
L GH+ + +S+ G + + G DR++
Sbjct: 661 LPGHIGEAYCLSVSPNGRYLVTCGSDRTL 689
Score = 50.1 bits (118), Expect = 7e-06
Identities = 56/244 (22%), Positives = 94/244 (37%), Gaps = 18/244 (7%)
Query: 189 PGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIY 248
PG + G SG L +VD + + I ++ + D K + D + I+
Sbjct: 452 PGDRYVLLGMKSGKLLIVDVAAADIVEEIPAHEGELWSIAILPDQKGCVTGSGDTTVKIW 511
Query: 249 -----DSGDETT----VKILYKNDARFAQ-VRC---HPCNSFIGSTSFDKTW--ILIDTV 293
D+G+ + +L+KN + + V C P ++ D T +DT
Sbjct: 512 TFELIDAGEGAAQTKVLSLLHKNTLKLEETVLCLAVSPDMKYLAVGLLDATVKVFFLDTF 571
Query: 294 KQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSV 353
K L GH V L D +L+ T D +W + G S+ H + SV
Sbjct: 572 KF--YLSLYGHKLPVICLDISYDSNLIVTGSADRNVKVWGLNFGDCHRSIFAHDDSVMSV 629
Query: 354 DWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKK 413
+ + + DG +K WD + T+ H + + NG YLV+ G D+
Sbjct: 630 QFIPRTHMFFTCGKDGKVKQWDGDNFEKILTLPGHIGEAYCLSVS-PNGRYLVTCGSDRT 688
Query: 414 VNIF 417
+ +F
Sbjct: 689 LRMF 692
>7291689 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 451
Score = 57.4 bits (137), Expect = 4e-08
Identities = 55/266 (20%), Positives = 118/266 (43%), Gaps = 16/266 (6%)
Query: 204 SLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYKND 263
S V ++++ C+ + I+ + W + + + + T G + I+D+ ++ + L ++
Sbjct: 171 SAVSGQVTRL-CDFNNEDNLITAVSWHGEGRQVAIGTQSGYVTIWDAENQKQINRLEEHS 229
Query: 264 ARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQ---EGHSAEVFSLSFHNDGSLV 320
AR + C + + S S D++ IL ++ P I GH EV L + +
Sbjct: 230 ARVTALAW--CGNRLASGSRDRS-ILQRDIRNPPTHITRCLRGHKLEVCGLQWSPSNRYL 286
Query: 321 STAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQL---ASGSGDGTIKVWDIR 377
++ G D L+W + I + H + ++ WS + L GS D ++ W++
Sbjct: 287 ASGGSDNRLLVWTDDWPEPIYAFDEHKAVVKALGWSPHKSGLLASGGGSADRCLRFWNV- 345
Query: 378 KKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERS-LEGHLDKVM 436
G + + + +S + + + + + + G+ + I +K+ + L GH +V+
Sbjct: 346 LTGKLVKCINTGAQISNLAWARDSRELVTTHGHAQPQVIAWRYPSLKQMARLSGHTQRVL 405
Query: 437 SIDIVGPD---IYSAGWDRSVNKWGV 459
+ V PD I + G D ++ W V
Sbjct: 406 HLS-VSPDNESIVTGGADETLRFWTV 430
>HsM8923075 [R] KOG0266 WD40 repeat-containing protein
Length = 504
Score = 57.0 bits (136), Expect = 6e-08
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 309 FSLSFHNDGSLVSTA--GLDAIALI-WDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASG 365
F L F ++G +++ A D +I ++I SG+ + L GH IY + WS++ + + +
Sbjct: 64 FCLDFSHNGRILAAACASRDGYPIILYEIPSGRFMRELCGHLNIIYDLSWSKDDHYILTS 123
Query: 366 SGDGTIKVWDIR-KKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIF----NDG 420
S DGT ++W N +L+H S V KF+ +V+ YD + I+ +
Sbjct: 124 SSDGTARIWKNEINNTNTFRVLSHPSFVYTAKFHPAVRELVVTGCYDSMIRIWKVEMRED 183
Query: 421 NWIKERSLEGHLDKVMSI--DIVGPDIYSAGWDRSVNKW 457
+ I R + H + S+ D G +YS + W
Sbjct: 184 SAILVRQFDVHKSFINSLCFDTEGHHMYSGDCTGVIVVW 222
>At4g05410 [A] KOG0299 U3 snoRNP-associated protein (contains WD40 repeats)
Length = 504
Score = 57.0 bits (136), Expect = 6e-08
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
+ HS E +L+ +DG ++T G+D IWD+R+ +++ + GH + + + +
Sbjct: 219 KNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSE 278
Query: 362 LASGSGDGTIKVWDIRKK 379
L SGS D T+KVW++ K
Sbjct: 279 LYSGSFDRTVKVWNVEDK 296
Score = 57.0 bits (136), Expect = 6e-08
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 304 HSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKN---------IMSLQG--------- 345
H V S++ +D S +A D + WD+ SGK I+ G
Sbjct: 160 HRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDKYIWPSDEILKSHGMKLREPRNK 219
Query: 346 -HSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGY 404
HS+ ++ S +G LA+G D + +WD+R + +V+ H + VS + F +
Sbjct: 220 NHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCF-RYGTSE 278
Query: 405 LVSSGYDKKVNIFN--DGNWIKERSLEGHLDKVMSIDIVGPD-IYSAGWDRSV 454
L S +D+ V ++N D +I E GH ++++ID + + + G DR++
Sbjct: 279 LYSGSFDRTVKVWNVEDKAFITEN--HGHQGEILAIDALRKERALTVGRDRTM 329
>7302218 [R] KOG0302 Ribosome Assembly protein
Length = 422
Score = 57.0 bits (136), Expect = 6e-08
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 18/166 (10%)
Query: 284 DKTWILIDTVKQAPILIQEGHSAEVFSLSFH-NDGSLVSTAGLDAIALIWDIRSGKNIMS 342
D TW V Q P+ GHS V L + N+ S++++ +D IWD R+
Sbjct: 221 DGTW----KVDQRPLA---GHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKAC 273
Query: 343 L----QGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRK---KGNVETILAHNSIVSQV 395
+ H + + W++N +ASG DG + +WD+R+ K + T H ++ V
Sbjct: 274 MLTCEDAHQSDVNVISWNRNEPFIASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTV 333
Query: 396 KFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIV 441
+++ L S G D ++ ++ + E+ ++ +D + D++
Sbjct: 334 EWSPAEATVLASGGDDDQIALW---DLAVEKDIDQAVDPAQNEDVL 376
>7300458 [R] KOG0275 Conserved WD40 repeat-containing protein
Length = 486
Score = 57.0 bits (136), Expect = 6e-08
Identities = 46/174 (26%), Positives = 76/174 (43%), Gaps = 8/174 (4%)
Query: 285 KTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQ 344
K W +I Q ++ H+ + L F D S V +A D + ++SGK + +
Sbjct: 266 KVWRII--TGQCLRKFEKAHTKGITCLQFSRDNSQVLSASFDYTVRLHGLKSGKMLKEFK 323
Query: 345 GHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETI--LAHNSIVSQVKFNKQNG 402
GHS + ++ +G+ + S S DGT+KVW ++ V T L + V+ V +N
Sbjct: 324 GHSSFVNEATFTPDGHSVLSASSDGTVKVWSLKTTECVATYKPLGNELAVNTVLILPKNP 383
Query: 403 GYLVSSGYDKKVNIFN-DGNWIKERS---LEGHLDKVMSIDIVGPDIYSAGWDR 452
+ + V I N G ++ S EG ++ G IY AG D+
Sbjct: 384 EHFIVCNRSNTVVIMNMQGQIVRSFSSGKREGGAFISATLSPRGEFIYCAGEDQ 437
Score = 50.8 bits (120), Expect = 4e-06
Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 14/172 (8%)
Query: 300 IQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKP--------IY 351
I+ G + V F DG + T +D +W+ +GK L+ ++ +
Sbjct: 186 IKFGQKSHVECAQFSPDGQYLITGSVDGFLEVWNFTTGKVRKDLKYQAQDQFMMMEQAVL 245
Query: 352 SVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETI-LAHNSIVSQVKFNKQNGGYLVSS-G 409
++++S++ +ASG+ DG IKVW I + AH ++ ++F++ N L +S
Sbjct: 246 ALNFSRDSEMVASGAQDGQIKVWRIITGQCLRKFEKAHTKGITCLQFSRDNSQVLSASFD 305
Query: 410 YDKKVNIFNDGNWIKERSLEGHLDKVMSIDIV--GPDIYSAGWDRSVNKWGV 459
Y +++ G +KE +GH V G + SA D +V W +
Sbjct: 306 YTVRLHGLKSGKMLKE--FKGHSSFVNEATFTPDGHSVLSASSDGTVKVWSL 355
>CE20251_2 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 287
Score = 57.0 bits (136), Expect = 6e-08
Identities = 47/218 (21%), Positives = 98/218 (44%), Gaps = 5/218 (2%)
Query: 236 IFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQ 295
I + D +I I+D+ + + + + HP ++ S S D+ + D +
Sbjct: 65 IATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVHPTLPYLISASDDRKIRVWDWENE 124
Query: 296 APILIQ-EGHSAEVFSLSFH-NDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSV 353
+ + + H+ + ++ + D + + LD +W + ++I +L+GH K + V
Sbjct: 125 WRMEQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQESICTLEGHEKGVNCV 184
Query: 354 DWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKK 413
++ G ++ SGS D +I VWDI+ + +ET+ N+ + V F +++S D
Sbjct: 185 EFLTGG-RIVSGSDDCSICVWDIQTQKCIETL--KNAHKNNVTFVTPFKTWIISGAEDST 241
Query: 414 VNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWD 451
V I+N + E+ L + + D + G+D
Sbjct: 242 VKIWNSQTFSLEKELNFEKGRAWCVAAGKSDAIAVGFD 279
>YMR131c [R] KOG0302 Ribosome Assembly protein
Length = 511
Score = 56.6 bits (135), Expect = 8e-08
Identities = 40/174 (22%), Positives = 73/174 (40%), Gaps = 14/174 (8%)
Query: 297 PILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKN--IMSLQGHSKPIYSVD 354
P + S E S + ++ +TAG D IWD RS K+ +S++ + + +
Sbjct: 315 PFTVSNNKSIEDIQWS-RTESTVFATAGCDGYIRIWDTRSKKHKPAISVKASNTDVNVIS 373
Query: 355 WSQN-GYQLASGSGDGTIKVWDIRK--KGNVETILA------HNSIVSQVKFNKQNGGYL 405
WS GY LASG +GT VWD+R+ N + + H ++ + FN + +
Sbjct: 374 WSDKIGYLLASGDDNGTWGVWDLRQFTPSNADAVQPVAQYDFHKGAITSIAFNPLDESIV 433
Query: 406 VSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRSVN--KW 457
D V +++ + ++ + + + P + W + V KW
Sbjct: 434 AVGSEDNTVTLWDLSVEADDEEIKQQAAETKELQEIPPQLLFVHWQKEVKDVKW 487
>YKR036c [R] KOG4155 FOG: WD40 repeat
Length = 659
Score = 56.6 bits (135), Expect = 8e-08
Identities = 34/110 (30%), Positives = 65/110 (58%), Gaps = 11/110 (10%)
Query: 318 SLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIR 377
S ++T D I +WD+R GK + L+GH+ I S+ + +L +GS D ++++WD+R
Sbjct: 516 SALATGTKDGIVRLWDLRVGKPVRLLEGHTDGITSLKFDSE--KLVTGSMDNSVRIWDLR 573
Query: 378 KKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDK-KVNIFN---DGNWI 423
++ ++A++ VS + F+ G L++ G ++ VN+FN D +W+
Sbjct: 574 -TSSILDVIAYDLPVSSLDFD----GKLITVGANEGGVNVFNMERDEHWM 618
>Hs8923881 [R] KOG0266 WD40 repeat-containing protein
Length = 404
Score = 56.6 bits (135), Expect = 8e-08
Identities = 41/145 (28%), Positives = 74/145 (50%), Gaps = 8/145 (5%)
Query: 319 LVSTAGL-DAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNG-YQLASGSGDGTIKVWDI 376
LV GL D IW++++G +++L GH + + ++ +G L S S D T+++WD+
Sbjct: 124 LVLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDL 183
Query: 377 RKKG-NVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKV 435
K G ++ + H V + + L S+ +K V +++ ++ R LEGH V
Sbjct: 184 NKHGKQIQVLSGHLQWVYCCSIS-PDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSV 242
Query: 436 MSIDIVGPD---IYSAGWDRSVNKW 457
+S D PD + +A +D +V W
Sbjct: 243 VSCDF-SPDSALLVTASYDTNVIMW 266
Score = 55.5 bits (132), Expect = 2e-07
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 3/133 (2%)
Query: 298 ILIQEGHSAEVFSLSFHNDGSLVS-TAGLDAIALIWDI-RSGKNIMSLQGHSKPIYSVDW 355
+L GH V LSF GSL+ +A D IWD+ + GK I L GH + +Y
Sbjct: 146 LLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSI 205
Query: 356 SQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVN 415
S + L S +G+ ++ +W +R + + H S V F+ + LV++ YD V
Sbjct: 206 SPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFS-PDSALLVTASYDTNVI 264
Query: 416 IFNDGNWIKERSL 428
+++ + RSL
Sbjct: 265 MWDPYTGERLRSL 277
>Hs16445424 [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 423
Score = 56.6 bits (135), Expect = 8e-08
Identities = 44/149 (29%), Positives = 76/149 (50%), Gaps = 6/149 (4%)
Query: 295 QAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVD 354
+ PI+ GH V S+ + +D + +A D +WD+ SG +L G+ K +
Sbjct: 247 RTPIVTLSGHMEAVSSVLW-SDAEEICSASWDHTIRVWDVGSGSLKSTLTGN-KVFNCIS 304
Query: 355 WSQNGYQLASGSGDGTIKVWDIR-KKGNVE--TILAHNSIVSQVKFNKQNGGYLVSSGYD 411
+S +LASGS D I++WD R K G++ ++ +H V+ VK++ + L+S D
Sbjct: 305 YSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLD 364
Query: 412 KKVNIFNDGNW-IKERSLEGHLDKVMSID 439
V +++ + L H DKV+S+D
Sbjct: 365 NIVKLWDTRSCKAPLYDLAAHEDKVLSVD 393
>CE25232 [S] KOG0310 Conserved WD40 repeat-containing protein
Length = 547
Score = 56.6 bits (135), Expect = 8e-08
Identities = 58/254 (22%), Positives = 110/254 (42%), Gaps = 17/254 (6%)
Query: 182 ISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTH 241
+S + SP + S L+L D + + S + +D+ D + + +
Sbjct: 29 VSSVRISPKKPYHVATTSSVRLTLYDTVVCEPLNLFSRFKKGVCSIDFRHDGRLLAIGGD 88
Query: 242 DGRIVIYD-----SGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFD---KTWILIDT- 292
+G++ I+D + ++++ + + V P + S + D K + + DT
Sbjct: 89 EGKVRIFDVEKTTGSSKVALRVMQASQSTVKSVHFSPRGDTVFSMADDGKIKQYRVADTA 148
Query: 293 --VKQAPILIQEGHSAEVF--SLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSK 348
V PI+ + H + ++S ND +V T G D +WDIRS + + L
Sbjct: 149 YGVNAVPIIEIQAHEDAIRCGAVSSIND-HIVLTGGYDHKVRLWDIRSKEKSLELDCEH- 206
Query: 349 PIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSS 408
P+ SV + G QL + + +K+WD + + AH V+ ++ N L+S+
Sbjct: 207 PVESVLFLP-GEQLIATAAGPIVKIWDTTTGRQLTALQAHYKTVTSLRL-ATNSTCLLSA 264
Query: 409 GYDKKVNIFNDGNW 422
G D++VN F N+
Sbjct: 265 GIDRRVNAFRTTNY 278
>CE01695 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 702
Score = 56.6 bits (135), Expect = 8e-08
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 303 GHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMS--LQGHSKPIYSVDWSQNGY 360
GHS+ V L+++ D + + D + DIR N M L H + + + WS +
Sbjct: 478 GHSSRVGCLAWNAD--TICSGSRDRTIMHRDIRCDDNDMGRKLTNHRQEVCGLKWSPDKQ 535
Query: 361 QLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSG 409
LASG D + VW++R+ ++T HN+ V + ++ + G LVS G
Sbjct: 536 LLASGGNDNQLLVWNLRRNEPIQTYTQHNAAVKALAWSPHHHGLLVSGG 584
>YDR267c [R] KOG0645 WD40 repeat protein
Length = 330
Score = 56.2 bits (134), Expect = 1e-07
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 14/155 (9%)
Query: 298 ILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKN-------IMSLQGHSKPI 350
+L + H + S+++ SL++ D+ IW + + ++GH +
Sbjct: 51 VLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEV 110
Query: 351 YSVDWSQNGYQLASGSGDGTIKVWDIRKKGN----VETILAHNSIVSQVKFNKQNGGYLV 406
V WS +GY LA+ S D ++ +W+ + G + + H+ V V ++ L
Sbjct: 111 KGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSE-ALLA 169
Query: 407 SSGYDKKVNIFN--DGNWIKERSLEGHLDKVMSID 439
SS YD V I+ D +W L GH V S D
Sbjct: 170 SSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSD 204
Score = 53.1 bits (126), Expect = 8e-07
Identities = 64/280 (22%), Positives = 118/280 (41%), Gaps = 37/280 (13%)
Query: 165 KLKQFSLKGMQVIDE----KPISEINTSPGGDLMACGSWSGNLSL--VDNSLSKIYCNRS 218
K F+L + V+DE K I + P L+A GS+ +S+ + S + +
Sbjct: 42 KYDDFTL--IDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDL 99
Query: 219 LS-----GTKISGLDWSVDSKNIFVCTHDGRIVIYD---SGDE-TTVKILYKNDARFAQV 269
L+ ++ G+ WS D + C+ D + I++ SG+E + +L ++ V
Sbjct: 100 LAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHV 159
Query: 270 RCHPCNSFIGSTSFDKT---WILIDTVKQAPILIQEGHSAEVFSLSFHNDGSL--VSTAG 324
HP + + S+S+D T W D + + + GH V+S F + + +
Sbjct: 160 IWHPSEALLASSSYDDTVRIWKDYDDDWEC-VAVLNGHEGTVWSSDFDKTEGVFRLCSGS 218
Query: 325 LDAIALIWDIRSGK---------NIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVW- 374
D+ +W + H + +Y+V W NG +AS DG + V+
Sbjct: 219 DDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGL-IASVGADGVLAVYE 277
Query: 375 --DIRKKGNVETILAHNSI-VSQVKFNKQNGGYLVSSGYD 411
D K + L H ++ VK+ + NG ++++G D
Sbjct: 278 EVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGD 317
>Hs21361641 [R] KOG0266 WD40 repeat-containing protein
Length = 1196
Score = 56.2 bits (134), Expect = 1e-07
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
Query: 309 FSLSFHNDGSLVSTA--GLDAIALI-WDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASG 365
F L F ++G +++ A D +I ++I SG+ + L GH IY + WS++ + + +
Sbjct: 613 FCLDFSHNGRILAAACASRDGYPIILYEIPSGRFMRELCGHLNIIYDLSWSKDDHYILTS 672
Query: 366 SGDGTIKVWDIR-KKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIF----NDG 420
S DGT ++W N +L H S V KF+ +V+ YD + I+ +
Sbjct: 673 SSDGTARIWKNEINNTNTFRVLPHPSFVYTAKFHPAVRELVVTGCYDSMIRIWKVEMRED 732
Query: 421 NWIKERSLEGHLDKVMSI--DIVGPDIYSAGWDRSVNKW 457
+ I R + H + S+ D G +YS + W
Sbjct: 733 SAILVRQFDVHKSFINSLCFDTEGHHMYSGDCTGVIVVW 771
>At1g80710 [S] KOG4328 WD40 protein
Length = 516
Score = 56.2 bits (134), Expect = 1e-07
Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 8/149 (5%)
Query: 280 STSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLD-AIALIWDIRSGK 338
S+S+D L+D K L+ A +FSLS + G D + +WD+R+GK
Sbjct: 281 SSSYDGLIRLMDVEKSVFDLVYSTDEA-IFSLSQRPNDEQSLYFGQDYGVFNVWDLRAGK 339
Query: 339 NIMSLQGHSKPIYSVDWS-QNGYQLASGSGDGTIKVWDIR----KKGNVETILAHNSIVS 393
++ + H + I S+D++ QN + +A+ S DGT +WD+R KK + + H+ V
Sbjct: 340 SVFHWELHERRINSIDFNPQNPHVMATSSTDGTACLWDLRSMGAKKPKTLSTVNHSRAVH 399
Query: 394 QVKFNKQNGGYLVSSGYDKKVNIFNDGNW 422
F+ +G L ++ D + + + N+
Sbjct: 400 SAYFS-PSGLSLATTSLDNYIGVLSGANF 427
>At1g62020 [U] KOG0292 Vesicle coat complex COPI alpha subunit
Length = 1216
Score = 56.2 bits (134), Expect = 1e-07
Identities = 42/160 (26%), Positives = 69/160 (42%), Gaps = 3/160 (1%)
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
E S V LSFH + + + +WD R G I H P+ V + +
Sbjct: 6 ETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPL 65
Query: 362 LASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGN 421
SG D IKVW+ + + T+L H + V+F+ + ++VS+ D+ + I+N +
Sbjct: 66 FVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEY-PWIVSASDDQTIRIWNWQS 124
Query: 422 WIKERSLEGHLDKVMSIDIVGPD--IYSAGWDRSVNKWGV 459
L GH VM + + SA D++V W +
Sbjct: 125 RTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 54.3 bits (129), Expect = 4e-07
Identities = 38/162 (23%), Positives = 70/162 (42%), Gaps = 13/162 (8%)
Query: 304 HSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLA 363
H V + FHN L + G D +W+ ++ + + +L GH I +V + +
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
Query: 364 SGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWI 423
S S D TI++W+ + + V + HN V F+ + +VS+ D+ V +++ G
Sbjct: 110 SASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIG--A 166
Query: 424 KERSLEGHLDKVMSIDIVGPDIYSA----------GWDRSVN 455
+ D +M + + D++ G DR VN
Sbjct: 167 LRKKTVSPADDIMRLTQMNSDLFGGVDAIVKYVLEGHDRGVN 208
Score = 49.7 bits (117), Expect = 9e-06
Identities = 50/218 (22%), Positives = 89/218 (39%), Gaps = 41/218 (18%)
Query: 241 HDGRIVIYDSGDETTVKIL-YKNDA----------RFAQVRCHPCNSFIGSTSFDKTWIL 289
H+ + + GD+ +K+ YKN V+ H +I S S D+T +
Sbjct: 60 HNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
Query: 290 IDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRS--------GKNIM 341
+ + + + GH+ V SFH LV +A LD +WDI + +IM
Sbjct: 120 WNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIM 179
Query: 342 S-------------------LQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIR--KKG 380
L+GH + + + + SG+ D +K+W + K
Sbjct: 180 RLTQMNSDLFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
Query: 381 NVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN 418
V+T+ H + VS V F+ + +VS+ DK + +++
Sbjct: 240 EVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWD 276
>At1g10580 [S] KOG0282 mRNA splicing factor
Length = 616
Score = 56.2 bits (134), Expect = 1e-07
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 11/163 (6%)
Query: 303 GHSAEVFSLSFH-NDGSLVSTAGLDAIALIWDI-RSGKNIMSLQGHSKPIYSVDWSQNGY 360
GH+ V ++ F G L+ +AG+D IWD+ SGK + + GH+K + + +S +G
Sbjct: 280 GHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGS 339
Query: 361 QLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFN----KQNGGYLVSSGYDKKVNI 416
+ + D IK WD + G V + + I VK N KQN L++ DKK+
Sbjct: 340 KFLTAGYDKNIKYWD-TETGQVISTFSTGKIPYVVKLNPDDDKQN--ILLAGMSDKKIVQ 396
Query: 417 FNDGNWIKERSLEGHLDKVMSIDIVGPD--IYSAGWDRSVNKW 457
++ + + HL V +I V + ++ D+S+ W
Sbjct: 397 WDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 439
>7297878 [K] KOG1034 Transcriptional repressor EED/ESC/FIE required for
transcriptional silencing WD repeat superfamily
Length = 425
Score = 56.2 bits (134), Expect = 1e-07
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 20/177 (11%)
Query: 300 IQEGHSAEVFSLSFH-----NDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKP----- 349
++E H A +F ++F+ ++ + +TAG + + + R G + L ++ P
Sbjct: 68 VKENHGANIFGVAFNTLLGKDEPQVFATAGSNRVTVYECPRQG-GMQLLHCYADPDPDEV 126
Query: 350 IYSVDWSQN----GYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYL 405
Y+ WS + LA+ G I+V D+ + V + H ++++KF+ L
Sbjct: 127 FYTCAWSYDLKTSSPLLAAAGYRGVIRVIDVEQNEAVGNYIGHGQAINELKFHPHKLQLL 186
Query: 406 VSSGYDKKVNIFNDGNWIKERSL---EGHLDKVMSID--IVGPDIYSAGWDRSVNKW 457
+S D + ++N + + L EGH D+V+SID + G I S+G D S+ W
Sbjct: 187 LSGSKDHAIRLWNIQSHVCIAILGGVEGHRDEVLSIDFNMRGDRIVSSGMDHSLKLW 243
>YDL145c [U] KOG0292 Vesicle coat complex COPI alpha subunit
Length = 1201
Score = 55.8 bits (133), Expect = 1e-07
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 4/178 (2%)
Query: 256 VKILYKNDARFAQVR---CHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLS 312
+K+L K +++ + + HP ++ F T L D + E H V L
Sbjct: 1 MKMLTKFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLD 60
Query: 313 FHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIK 372
FH + +AG D +W + + K + +L GH + +V + + + S S D TI+
Sbjct: 61 FHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIR 120
Query: 373 VWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEG 430
+W+ + + + + HN V +F+ + +VS+ D+ + I++ K S G
Sbjct: 121 IWNWQNRKEIACLTGHNHFVMCAQFHPTD-DLIVSASLDETIRIWDISGLRKRHSAPG 177
>SPAP17D4.01 [U] KOG0277 Peroxisomal targeting signal type 2 receptor
Length = 297
Score = 55.8 bits (133), Expect = 1e-07
Identities = 52/245 (21%), Positives = 110/245 (44%), Gaps = 16/245 (6%)
Query: 226 GLDWSVDSKN-IFVCTHDGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNS----FIGS 280
G+ WS + +N ++ C DG + ++D + K ++K A++ N+ + +
Sbjct: 53 GVRWSQNCENQVYACCGDGSLRLFDLTMPS--KPIHKWKEHKAEIVAIDTNTVDRRIVVT 110
Query: 281 TSFDKTWIL-IDTVKQAPILIQEGHSAEVFSLSFH-NDGSLVSTAGLDAIALIWDIRSGK 338
S+D T L + + + + G ++ + +++ H + +L+ D + WD RS
Sbjct: 111 GSWDGTIKLWLGNLPNSVQTLNNGSNSRILTVATHYSSPNLLGYTSSDGLCKFWDFRSSD 170
Query: 339 NIMSLQGHSKPIYSVDWSQNGYQLA-SGSGDGTIKVWDIRK-KGNVETILAHNSIVSQVK 396
MS++ ++ I ++WS++ +++ + + + +DI K + + H V +K
Sbjct: 171 KFMSIEIPNQ-ITCMNWSKSNHRMVYTADNNNLVYCYDIANLKTPLSVLSGHQLAVRSIK 229
Query: 397 FNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIV----GPDIYSAGWDR 452
+ L ++ YD IF+ R ++ H + V +D G I S GWD
Sbjct: 230 SSNSAHDLLATASYDMTSRIFDPEQHSCIRKVDLHSEFVRDVDWSDFGDGSWIASVGWDE 289
Query: 453 SVNKW 457
S+ W
Sbjct: 290 SLYIW 294
>Hs19923529 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 1336
Score = 55.8 bits (133), Expect = 1e-07
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 4/140 (2%)
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
+ H + SF + +T D IWD L+GH + VDW
Sbjct: 199 QAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGL 258
Query: 362 LASGSGDGT--IKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFND 419
+ SGS D IK WD + ++ T+ AH + V +VK N NG +L+++ D +F+
Sbjct: 259 VVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLN-LNGNWLLTASRDHLCKLFDI 317
Query: 420 GNWIKE-RSLEGHLDKVMSI 438
N +E + GH + ++
Sbjct: 318 RNLKEELQVFRGHKKEATAV 337
>CE11860 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 412
Score = 55.8 bits (133), Expect = 1e-07
Identities = 46/166 (27%), Positives = 79/166 (46%), Gaps = 14/166 (8%)
Query: 226 GLDWSVDSK-NIFVCTHDGRIVIYDSGDETTVKILYKNDARFA-------QVRCHPCNSF 277
G+ WS + ++ DG I +D T+ ++F V H ++F
Sbjct: 176 GMSWSNTREGHLLTAGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAEDVSFHALHNF 235
Query: 278 I-GSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGS-LVSTAGLDAIALIWDIR 335
+ GS D+ L D + P L GH+AEV ++F+ +++T +D +WD+R
Sbjct: 236 VFGSVGDDRKLNLWDLRQSKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDMR 295
Query: 336 S-GKNIMSLQGHSKPIYSVDWSQNGYQ--LASGSGDGTIKVWDIRK 378
+ K + +L+ H+ I+ V +S + Y+ LAS D + VWDI K
Sbjct: 296 NMRKKMYTLKHHNDEIFQVSFSPH-YETVLASSGSDDRVIVWDISK 340
Score = 53.1 bits (126), Expect = 8e-07
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 15/180 (8%)
Query: 294 KQAPILIQEGHSAEVFSLSFHN--DGSLVSTAGLDAIALIWDIRSGKNIMS-------LQ 344
K P L +GH E + +S+ N +G L+ TAG D + WDI + + I +
Sbjct: 160 KFRPQLRLKGHEGEGYGMSWSNTREGHLL-TAGDDGMICHWDINANQTISGQIVPQSKFK 218
Query: 345 GHSKPIYSVDW-SQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGG 403
GHS V + + + + S D + +WD+R+ T + H + V+ + FN +
Sbjct: 219 GHSSNAEDVSFHALHNFVFGSVGDDRKLNLWDLRQSKPQLTAVGHTAEVNCITFNPFSEY 278
Query: 404 YLVSSGYDKKVNIFNDGNWIKER-SLEGHLDKVMSIDI---VGPDIYSAGWDRSVNKWGV 459
L + DK V +++ N K+ +L+ H D++ + + S+G D V W +
Sbjct: 279 ILATGSVDKTVALWDMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDI 338
>CE09819 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 645
Score = 55.8 bits (133), Expect = 1e-07
Identities = 49/217 (22%), Positives = 91/217 (41%), Gaps = 13/217 (5%)
Query: 202 NLSLVDNSLSKIY-CNRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILY 260
++ DN S+++ S + + +G V S N + D R++I +GD T V++
Sbjct: 367 DIETADNVQSQMFDLQGSTTSVRYTGHGGPVFSVNF---SPDRRLLISSAGDRT-VRLWS 422
Query: 261 KNDARFAQVRCHPCNS-------FIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSF 313
R A + P + + + S DKT + T + P+ I +V + +
Sbjct: 423 METQRNAVIYRTPAVAQFCSRGYYFATASADKTAAMWSTDRMHPLRIFADPYGDVGCIDY 482
Query: 314 HNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKV 373
H + + ++ D +WD+ SG + GH I +V +S G + S G + +
Sbjct: 483 HPNCNYIAGGSDDRYVRVWDVCSGTRVRIFSGHKASIIAVKFSPCGRYIVSLDAIGNLMI 542
Query: 374 WDIRKKGNVET-ILAHNSIVSQVKFNKQNGGYLVSSG 409
WD+ + V I + F++ G + VS G
Sbjct: 543 WDLAYQRLVAAEITEQAGTKGSITFSRDGGVFAVSHG 579
>At5g53500 [S] KOG0283 WD40 repeat-containing protein
Length = 654
Score = 55.8 bits (133), Expect = 1e-07
Identities = 28/81 (34%), Positives = 45/81 (54%), Gaps = 2/81 (2%)
Query: 338 KNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKF 397
K + +GH+ + + WS++ Y L S S D T+++W + + + AHNS V+ V+F
Sbjct: 319 KPLYEFRGHTGEVLDISWSKDNY-LLSASMDKTVRLWKVGSNDCLG-VFAHNSYVTSVQF 376
Query: 398 NKQNGGYLVSSGYDKKVNIFN 418
N N Y +S D KV I+N
Sbjct: 377 NPVNENYFMSGSIDGKVRIWN 397
>At1g73720 [R] KOG0275 Conserved WD40 repeat-containing protein
Length = 522
Score = 55.8 bits (133), Expect = 1e-07
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 11/172 (6%)
Query: 255 TVKILYKNDARFAQVRCHPCNSFIGSTSFD---KTWILIDTVKQAPILIQEG-----HSA 306
T+K K+ A A R P F+ S+S D + W I + + Q H
Sbjct: 218 TIKFGKKSHAECA--RFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDD 275
Query: 307 EVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGS 366
V + F D ++++ D IW IR+G I HS+ + S+ +S++G QL S S
Sbjct: 276 PVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTS 335
Query: 367 GDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFN 418
D T ++ ++ ++ H S V+ F +G ++++ D V +++
Sbjct: 336 FDQTARIHGLKSGKLLKEFRGHTSYVNHAIFT-SDGSRIITASSDCTVKVWD 386
Score = 55.1 bits (131), Expect = 2e-07
Identities = 27/83 (32%), Positives = 46/83 (54%)
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
+ HS V SLSF DGS + + D A I ++SGK + +GH+ + ++ +G +
Sbjct: 313 DAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSR 372
Query: 362 LASGSGDGTIKVWDIRKKGNVET 384
+ + S D T+KVWD + ++T
Sbjct: 373 IITASSDCTVKVWDSKTTDCLQT 395
>7303841 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 787
Score = 55.8 bits (133), Expect = 1e-07
Identities = 77/318 (24%), Positives = 134/318 (41%), Gaps = 26/318 (8%)
Query: 162 LESKLKQFSLKGMQVIDEKPISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSG 221
L+ +L+ LK + + DE + + + G L+ S SG L VD KI S S
Sbjct: 238 LQEQLESKQLKVLPLYDE--LEGVVYADEGQLIIVASGSGKLQQVDPKSWKIRDILSQSD 295
Query: 222 TKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYK-NDARFAQVRCHPCNSFIGS 280
+IS L + K + + T + I++YD +K L ND + ++
Sbjct: 296 FQISRLLHCSELKQLALVTTEQNILVYDVETLEPIKHLVGYNDEILDMCFMGEHDRYLAV 355
Query: 281 TSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNI 340
+ K + L DT + GHS V SL+ + L+ + G D +W ++ K+
Sbjct: 356 ATNSKHFKLYDTEHDMNCKLIVGHSDTVMSLAASQN--LLISVGKDCSVRLWRLQHDKDC 413
Query: 341 MSLQG-------HSKPIYSVDWSQNGYQ-LASGSGDGTIKVWD-IRKKGNVET------- 384
SL+ H+ I V + NG AS S DG++KVW +R K + +
Sbjct: 414 -SLEALTQQANCHTSTIGCVAMTHNGATGFASVSQDGSMKVWQLVRSKEDRNSYSFNLRY 472
Query: 385 -ILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGP 443
L+H+ V+ V + N + ++ DK ++ + + L GH V S+
Sbjct: 473 AALSHDKEVNCVAY-APNNKLIATASQDKTAKVWLAESNTLQGVLRGHTRGVWSVRFSPV 531
Query: 444 D--IYSAGWDRSVNKWGV 459
D + ++ D ++ W +
Sbjct: 532 DQIVLTSSSDCTLRIWSI 549
Score = 52.4 bits (124), Expect = 1e-06
Identities = 37/150 (24%), Positives = 66/150 (43%), Gaps = 7/150 (4%)
Query: 273 PCNSFIGSTSFDKT---WILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIA 329
P N I + S DKT W+ Q + GH+ V+S+ F +V T+ D
Sbjct: 488 PNNKLIATASQDKTAKVWLAESNTLQG---VLRGHTRGVWSVRFSPVDQIVLTSSSDCTL 544
Query: 330 LIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHN 389
IW I + I I ++ +G + S + DG +K+W+I+ ++++ HN
Sbjct: 545 RIWSISNFSCIKRFDQECT-ILRAEFLDHGKFIISAASDGLLKLWNIKTNTCLQSLDEHN 603
Query: 390 SIVSQVKFNKQNGGYLVSSGYDKKVNIFND 419
V + + ++ + + G D K+ F D
Sbjct: 604 DRVWALAVSARSNRFFYTGGADSKLIRFGD 633
Score = 50.8 bits (120), Expect = 4e-06
Identities = 36/158 (22%), Positives = 78/158 (48%), Gaps = 5/158 (3%)
Query: 304 HSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLA 363
H EV +++ + L++TA D A +W S L+GH++ ++SV +S +
Sbjct: 477 HDKEVNCVAYAPNNKLIATASQDKTAKVWLAESNTLQGVLRGHTRGVWSVRFSPVDQIVL 536
Query: 364 SGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGNWI 423
+ S D T+++W I ++ +I+ + +F +G +++S+ D + ++N
Sbjct: 537 TSSSDCTLRIWSISNFSCIKRFDQECTIL-RAEF-LDHGKFIISAASDGLLKLWNIKTNT 594
Query: 424 KERSLEGHLDKVMSIDIVGPD---IYSAGWDRSVNKWG 458
+SL+ H D+V ++ + Y+ G D + ++G
Sbjct: 595 CLQSLDEHNDRVWALAVSARSNRFFYTGGADSKLIRFG 632
>Hs7108333_2 [R] KOG4155 FOG: WD40 repeat
Length = 668
Score = 55.8 bits (133), Expect = 1e-07
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
Query: 278 IGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSG 337
I S DKT + +L + H EV +F D ++T +D IW+ +G
Sbjct: 50 IASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTG 109
Query: 338 KNIMSLQGHSKPIYSVDWSQNGYQL--ASGSGDGTIKVWDIRKKGNVETILAHNSIVSQV 395
+ + + HS+ + ++ + + L A+GS D +K+WD+ +K T+ H + V+
Sbjct: 110 ELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNHC 169
Query: 396 KFN 398
+F+
Sbjct: 170 RFS 172
Score = 52.0 bits (123), Expect = 2e-06
Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 34/260 (13%)
Query: 177 IDEKPISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNI 236
+ E +S SP +A G +G + +++ ++I+ +R + + ++ D K +
Sbjct: 379 LTEAQVSCCCLSPHLQYIAFGDENGAIEILELVNNRIFQSRFQHKKTVWHIQFTADEKTL 438
Query: 237 FVCTHDGRIVIYD---------SGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFD--- 284
+ D I +++ G + TVK D R + NS + S SFD
Sbjct: 439 ISSSDDAEIQVWNWQLDKCIFLRGHQETVK-----DFRLLK------NSRLLSWSFDGTV 487
Query: 285 KTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQ 344
K W +I K+ + +G V S +D + S+ D A IW + L+
Sbjct: 488 KVWNIITGNKEKDFVCHQG---TVLSCDISHDATKFSSTSADKTAKIWSFDLLLPLHELR 544
Query: 345 GHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKG--------NVETILAHNSIVSQVK 396
GH+ + +S + LA+G +G I++W++ + E H V+ +
Sbjct: 545 GHNGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPLSEEGAATHGGWVTDLC 604
Query: 397 FNKQNGGYLVSSGYDKKVNI 416
F+ + + GY K N+
Sbjct: 605 FSPDGKMLISAGGYIKWWNV 624
>YBR103w [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 535
Score = 55.5 bits (132), Expect = 2e-07
Identities = 40/172 (23%), Positives = 76/172 (43%), Gaps = 18/172 (10%)
Query: 304 HSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGK---------------NIMSLQGHSK 348
H A + S+ ++ DG+ + + ++ + ++W++ SG N + G
Sbjct: 260 HRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGS 319
Query: 349 PIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSS 408
V+W + + G G I V+ I +K ++ H+ +S ++FN N L+S+
Sbjct: 320 LGVDVEWVDDDKFVIPGP-KGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNK-LLLSA 377
Query: 409 GYDKKVNIFNDGNWIKERSLEGHLDKVMSIDIVGPD-IYSAGWDRSVNKWGV 459
D + I++ GN + GH ++S VG D + S D SV W +
Sbjct: 378 SDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSL 429
>SPCC1672.10 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 430
Score = 55.5 bits (132), Expect = 2e-07
Identities = 51/186 (27%), Positives = 90/186 (47%), Gaps = 30/186 (16%)
Query: 216 NRSLSGTKISGLDWSVDSKNIFVCTHDGRIVIYDSGDETTVKILYK--------NDARFA 267
N +L G +G + V +C D + + S + + + K ND +F
Sbjct: 191 NPNLPGNLATGAEDQV------ICLWDVQTQSFTSSETKVISPIAKYHRHTDIVNDVQF- 243
Query: 268 QVRCHPCN-SFIGSTSFDKTWILIDT----VKQAPILIQEGHSAEVFSLSFH--NDGSLV 320
HP + + + S S D T + DT ++AP +IQ HS + +++ + ND L+
Sbjct: 244 ----HPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQ-AHSKAINAVAINPFND-YLL 297
Query: 321 STAGLDAIALIWDIRSG-KNIMSLQGHSKPIYSVDWSQNGYQ-LASGSGDGTIKVWDIRK 378
+TA D +WD+R+ + + +L+GH +Y ++WS + LAS S D + +WD+ K
Sbjct: 298 ATASADKTVALWDLRNPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWDLEK 357
Query: 379 KGNVET 384
G +T
Sbjct: 358 IGEEQT 363
>CE05533 [A] KOG0285 Pleiotropic regulator 1
Length = 494
Score = 55.5 bits (132), Expect = 2e-07
Identities = 39/160 (24%), Positives = 66/160 (40%), Gaps = 3/160 (1%)
Query: 300 IQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNG 359
+ GH+ V ++ ++ G D I IWD+ SG+ +SL GH + +V S
Sbjct: 179 VASGHTGWVRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRH 238
Query: 360 YQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFND 419
L SG D +K WD+ + H S V + + + LV+ D +++
Sbjct: 239 PFLFSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVH-PSLDVLVTCARDSTARVWDM 297
Query: 420 GNWIKERSLEGHLDKVMSI--DIVGPDIYSAGWDRSVNKW 457
+ GH + V + V P + +A D +V W
Sbjct: 298 RTKAQVHCFAGHTNTVADVVCQSVDPQVITASHDATVRLW 337
Score = 51.6 bits (122), Expect = 2e-06
Identities = 45/230 (19%), Positives = 96/230 (41%), Gaps = 4/230 (1%)
Query: 182 ISEINTSPGGDLMACGSWSGNLSLVDNSLSKIYCNRSLSGTKISGLDWSVDSKNIFVCTH 241
+ ++ PG A G + + D + ++ + + + + + S +F
Sbjct: 187 VRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRHPFLFSGGE 246
Query: 242 DGRIVIYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQ 301
D ++ +D ++ + + + + HP + + + D T + D +A +
Sbjct: 247 DKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQVHCF 306
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
GH+ V + + V TA DA +WD+ +G+++ +L H K + ++
Sbjct: 307 AGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGRSMCTLTHHKKSVRALTIHPRLNM 366
Query: 362 LASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYD 411
AS S D IK W + K ++ + HN+I++ + N +V SG D
Sbjct: 367 FASASPD-NIKQWKLPKGEFMQNLSGHNAIINTLSSNDDG---VVVSGAD 412
Score = 51.6 bits (122), Expect = 2e-06
Identities = 32/124 (25%), Positives = 55/124 (43%)
Query: 269 VRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSAEVFSLSFHNDGSLVSTAGLDAI 328
V+ P + F+ S DK D I GH + V +LS H ++ T D+
Sbjct: 232 VKVSPRHPFLFSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLDVLVTCARDST 291
Query: 329 ALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGSGDGTIKVWDIRKKGNVETILAH 388
A +WD+R+ + GH+ + V Q+ + S D T+++WD+ ++ T+ H
Sbjct: 292 ARVWDMRTKAQVHCFAGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGRSMCTLTHH 351
Query: 389 NSIV 392
V
Sbjct: 352 KKSV 355
>SPBC1198.12 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 421
Score = 55.1 bits (131), Expect = 2e-07
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRS-GKNIMSLQGHSKPIYSVDWSQNGY 360
+GHS V +L++ ND +L S G D + L D+R+ G ++ H + I + W ++
Sbjct: 205 KGHSERVAALAW-NDNTLTS-GGKDEVILHHDLRAPGCCAEMMKVHEQEICGLQWDRSLG 262
Query: 361 QLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSG--YDKKVNIFN 418
QLASG D + VWD R + H + V + ++ G L S G D+ + I N
Sbjct: 263 QLASGGNDNNLFVWDYRSSRPLHKFEEHTAAVKAIGWSPHQRGILASGGGTIDRCLTIHN 322
Query: 419 DGNWIKERSLEGHLDKVMSIDIVGPDIYSAGWDRSVNK 456
+L G L + G + + W ++ N+
Sbjct: 323 --------TLTGRLQNKLD---TGSQVCNMAWSKTSNE 349
>HsM4827028 [B] KOG0639 Transducin-like enhancer of split protein (contains
WD40 repeats)
Length = 770
Score = 55.1 bits (131), Expect = 2e-07
Identities = 54/229 (23%), Positives = 85/229 (36%), Gaps = 47/229 (20%)
Query: 189 PGGDLMACGSWSGNLSLVDNSLS--KIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIV 246
P G + G + LS+ D + +I + S L S DSK F C DG I
Sbjct: 540 PDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 599
Query: 247 IYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSA 306
++D ++T V+ +GH+
Sbjct: 600 VWDLHNQTLVRQF------------------------------------------QGHTD 617
Query: 307 EVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGS 366
+ NDG+ + T GLD WD+R G+ + + I+S+ + G LA G
Sbjct: 618 GASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQ-HDFTSQIFSLGYCPTGEWLAVGM 676
Query: 367 GDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVN 415
++V + K + L H S V +KF G + VS+G D +N
Sbjct: 677 ESSNVEVLHVNKPDKYQLHL-HESCVLSLKF-AYCGKWFVSTGKDNLLN 723
>Hs4758030 [U] KOG0292 Vesicle coat complex COPI alpha subunit
Length = 1224
Score = 55.1 bits (131), Expect = 2e-07
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 3/160 (1%)
Query: 302 EGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQ 361
E SA V LSFH + T+ + + +WD R I H P+ +D+ +
Sbjct: 6 ETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPL 65
Query: 362 LASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVNIFNDGN 421
SG D IKVW+ + + + T+L H + F+ + +++S+ D+ + ++N +
Sbjct: 66 FVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEY-PWILSASDDQTIRVWNWQS 124
Query: 422 WIKERSLEGHLDKVMSIDIVGPD--IYSAGWDRSVNKWGV 459
L GH VM + + SA D++V W +
Sbjct: 125 RTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWDI 164
>Hs4503513 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 325
Score = 55.1 bits (131), Expect = 2e-07
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 297 PILIQEGHSAEVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWS 356
PIL+Q GH + + ++ +G L+ T D I +W +G+ + + GH+ ++ VD
Sbjct: 3 PILLQ-GHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDAD 61
Query: 357 QNGYQLASGSGDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKV 414
+ + +GS D + ++WD + G +L NS V F+ GG ++ DK++
Sbjct: 62 WDTKHVLTGSADNSCRLWDC-ETGKQLALLKTNSAVRTCGFD--FGGNIIMFSTDKQM 116
>Hs21541824 [B] KOG0639 Transducin-like enhancer of split protein (contains
WD40 repeats)
Length = 770
Score = 55.1 bits (131), Expect = 2e-07
Identities = 54/229 (23%), Positives = 85/229 (36%), Gaps = 47/229 (20%)
Query: 189 PGGDLMACGSWSGNLSLVDNSLS--KIYCNRSLSGTKISGLDWSVDSKNIFVCTHDGRIV 246
P G + G + LS+ D + +I + S L S DSK F C DG I
Sbjct: 540 PDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 599
Query: 247 IYDSGDETTVKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILIDTVKQAPILIQEGHSA 306
++D ++T V+ +GH+
Sbjct: 600 VWDLHNQTLVRQF------------------------------------------QGHTD 617
Query: 307 EVFSLSFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQGHSKPIYSVDWSQNGYQLASGS 366
+ NDG+ + T GLD WD+R G+ + + I+S+ + G LA G
Sbjct: 618 GASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQ-HDFTSQIFSLGYCPTGEWLAVGM 676
Query: 367 GDGTIKVWDIRKKGNVETILAHNSIVSQVKFNKQNGGYLVSSGYDKKVN 415
++V + K + L H S V +KF G + VS+G D +N
Sbjct: 677 ESSNVEVLHVNKPDKYQLHL-HESCVLSLKF-AYCGKWFVSTGKDNLLN 723
>CE03274 [A] KOG0640 mRNA cleavage stimulating factor complex; subunit 1
Length = 430
Score = 55.1 bits (131), Expect = 2e-07
Identities = 51/171 (29%), Positives = 81/171 (46%), Gaps = 12/171 (7%)
Query: 256 VKILYKNDARFAQVRCHPCNSFIGSTSFDKTWILID----TVKQAPILIQEGHSAEVFSL 311
++ LY + V HP +S + S S DKT L D VK+A + E + V +L
Sbjct: 163 IRTLYDHVDDVNTVIFHPRDSILISGSNDKTVKLFDFSKTAVKKAMKTLSEVYP--VRAL 220
Query: 312 SFHNDGSLVSTAGLDAIALIWDIRSGKNIMSLQG---HSKPIYSVDWSQNGYQLASGSGD 368
S H G + A +++I + + S H++ + V +S+N + S D
Sbjct: 221 SCHPGGEFLLVATDHPTVRLYNIETAQAYASANPDDQHTESVTDVHYSENARLYVTASKD 280
Query: 369 GTIKVWDIRKKGNVETI-LAHN-SIVSQVKFNKQNGGYLVSSGYDKKVNIF 417
G +K+WD VET AH+ S + KF K NG Y+++SG D V ++
Sbjct: 281 GHVKIWDGVSNRCVETFKRAHDGSSICSAKFTK-NGKYILTSGMDSIVKLW 330
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.134 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,572,084
Number of Sequences: 60738
Number of extensions: 1123789
Number of successful extensions: 8756
Number of sequences better than 1.0e-05: 350
Number of HSP's better than 0.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 219
Number of HSP's that attempted gapping in prelim test: 6017
Number of HSP's gapped (non-prelim): 1537
length of query: 459
length of database: 30,389,216
effective HSP length: 110
effective length of query: 349
effective length of database: 23,708,036
effective search space: 8274104564
effective search space used: 8274104564
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)