ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV1299 good R KOG2785 General function prediction only C2H2-type Zn-finger protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV1299 455399 456661 421
(421 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YLR387c [R] KOG2785 C2H2-type Zn-finger protein 374 e-103
YBR267w [R] KOG2785 C2H2-type Zn-finger protein 206 7e-53
SPCC550.15c [R] KOG2785 C2H2-type Zn-finger protein 163 5e-40
7293398 [R] KOG2785 C2H2-type Zn-finger protein 127 4e-29
At4g31420 [R] KOG2785 C2H2-type Zn-finger protein 119 1e-26
At2g24500 [R] KOG2785 C2H2-type Zn-finger protein 118 2e-26
CE04004 [R] KOG2785 C2H2-type Zn-finger protein 112 1e-24
Hs15529978 [R] KOG2785 C2H2-type Zn-finger protein 102 8e-22
>YLR387c [R] KOG2785 C2H2-type Zn-finger protein
Length = 432
Score = 374 bits (961), Expect = e-103
Identities = 198/437 (45%), Positives = 272/437 (61%), Gaps = 32/437 (7%)
Query: 7 FTCNSCMIQFQSSGLQRHHMKTEWHRYNLKRRVAQLAPISASLFAEKLQMSNREQELNQV 66
FTCN C+IQF++S LQR+HMKTEWHRYNLKRR+A L PI A FAEKLQ+S +EQ NQV
Sbjct: 6 FTCNCCVIQFKTSDLQRYHMKTEWHRYNLKRRIANLPPIGAEQFAEKLQISEKEQAENQV 65
Query: 67 DEFGFPVLKPI-NHSRGFQRK---------GRKLGRSRLEGLQHS---GQDLRSLSPASS 113
DEFGFPVLKP+ N S +K GRK+G + L+ + RS+SP+ S
Sbjct: 66 DEFGFPVLKPVMNQSNALPQKQKKPIKSKRGRKVGTNLLKRKDRDIAKEKQNRSVSPSGS 125
Query: 114 ITSHASRATF----RSTDLEEEAFSDHGFTTEDSYSHYSNTDHESSDESEIGNDHERISS 169
I+S S T +TD E+ S++GFT++ +Y + ++ + + ++E+I+
Sbjct: 126 ISSQLSNLTVGTENTNTDYGEDTVSEYGFTSDSNYEYATSDEELDIADKPSDKENEKITI 185
Query: 170 TECIYCGKNSKQVEANVRHMFNKHGLYLPERSYLTDLTGLLKYLTDIIIVNKNCLCCKYQ 229
TECIYCGK++K+VE NV+HMF++HGL++PERSYL DL GLL++L +I+++ NCLCC +
Sbjct: 186 TECIYCGKDNKEVERNVKHMFSEHGLFIPERSYLIDLNGLLEFLIKMIVIDHNCLCCNFH 245
Query: 230 GSSVESIRAHMSSKHHCMLPYETKAERAAISQFYDFSSLDEAAVSDSSAKHGTSSSVSPV 289
GS +ESIRAHM+SK HC LPYETK ER + FYDF+ D + + +S +S V
Sbjct: 246 GSGLESIRAHMASKRHCRLPYETKEERQLFAPFYDFTYDDHSISKNLQNDRAITSKLSSV 305
Query: 290 TFANSESIIQTAELHSSEDGADE-----AEADINSNYALVHIDDSGVELQLGNGIKVGHR 344
A ++ EDG + +E DIN+NY V ID+SG+EL L G ++GHR
Sbjct: 306 YGAKND----------EEDGEVDITLVSSENDINANYTTVSIDESGLELTLPTGARLGHR 355
Query: 345 SMQRYYRQNVPLGSTSPXXXXXXXXXXXXXXXXXQSRQMKKAEKEIKQLEKQHSNKHVRL 404
+ QRYYRQN+P +Q KK K+++QLEK N +R
Sbjct: 356 AGQRYYRQNLPSQPNPNESRRTITAADRRMVSGVTEKQYKKGMKKMQQLEKNAINTQIRR 415
Query: 405 QIRRANHQTHFRDELLQ 421
+I+R N QTH+RDELLQ
Sbjct: 416 EIKRVNFQTHYRDELLQ 432
>YBR267w [R] KOG2785 C2H2-type Zn-finger protein
Length = 393
Score = 206 bits (523), Expect = 7e-53
Identities = 130/430 (30%), Positives = 208/430 (48%), Gaps = 46/430 (10%)
Query: 1 MSDIVMFTCNSCMIQFQSSGLQRHHMKTEWHRYNLKRRVAQLAPISASLFAEKLQMSNRE 60
MS ++TCNSC++ F SS QR HMK++WHRYNLKRRVAQL PIS F K+ +
Sbjct: 1 MSSSGVYTCNSCVLTFDSSDEQRAHMKSDWHRYNLKRRVAQLPPISFETFDSKVSAAAAS 60
Query: 61 QELNQVDEFGFPVLKPINHSRGFQRKGRKLGRSRLEGLQHSGQDLRSLSPASSITSHASR 120
+ E KP+ ++L R + L + L ++ A+ + +
Sbjct: 61 TSKSAEKE------KPVTK--------KELKRREKQALLEKKKKLLEIARANMLENMQKS 106
Query: 121 ATFRSTDLEEEAFSDHGFTTEDSYSHYSNTDHESSDE------SEIGNDHERISSTECIY 174
+ DL + + ++ E + + +E E + I +C++
Sbjct: 107 QEGNTPDLSKLSLQENEENKEKEEPKKEEPEQLTEEEMAERVMQENVRNRVDIPLEQCLF 166
Query: 175 C--GKNSKQVEANVRHMFNKHGLYLPERSYLTDLTGLLKYLTDIIIVNKNCLCCKYQGSS 232
C K+ K VE N+ HMF HG Y+PE+ YL D GL+KY+++ I + C+ C YQG +
Sbjct: 167 CEHNKHFKDVEENLEHMFRTHGFYIPEQKYLVDKIGLVKYMSEKIGLGNICIVCNYQGRT 226
Query: 233 VESIRAHMSSKHHCMLPYETKAERAAISQFYDFSSLDEAAVSDSSAKHGTSSSVSPVTFA 292
+ ++R HM +K HC +PYE++ ER IS+FYDF+S ++A
Sbjct: 227 LTAVRQHMLAKRHCKIPYESEDERLEISEFYDFTS----------------------SYA 264
Query: 293 NSESIIQTAELHSSED-GADEAEADINSNYALVHIDDSGVELQLGNGIKVGHRSMQRYYR 351
N S ED G+DEA +D + + ++ + G+EL L GIKVGHRS+QRYY+
Sbjct: 265 NFNSNTTPDNEDDWEDVGSDEAGSD-DEDLPQEYLYNDGIELHLPTGIKVGHRSLQRYYK 323
Query: 352 QNVPLGSTSPXXXXXXXXXXXXXXXXXQSRQMKKAEKEIKQLEKQHSNKHVRLQIRRANH 411
Q++ ++ + ++ + Q E+ + + + N+
Sbjct: 324 QDLKPEVILTEGQGTLVAAETRSFLPAFDKKGVQTQQRVWQTERFDKKRLDKRSAKFVNN 383
Query: 412 QTHFRDELLQ 421
Q H+RD+LLQ
Sbjct: 384 QPHYRDQLLQ 393
>SPCC550.15c [R] KOG2785 C2H2-type Zn-finger protein
Length = 463
Score = 163 bits (412), Expect = 5e-40
Identities = 134/476 (28%), Positives = 209/476 (43%), Gaps = 78/476 (16%)
Query: 7 FTCNSCMIQFQSSGLQRHHMKTEWHRYNLKRRVAQLAPISASLFAEK-LQMSNREQELNQ 65
F C +C + F ++ Q+ H K++WH YNLKR+VA L P+SA +FA K L + + +E+ +
Sbjct: 5 FACTTCTVAFNNAESQKIHWKSDWHHYNLKRKVASLPPLSAEVFAGKILSIQKQNEEVQK 64
Query: 66 VDEF--GFPVLKPINHSRGF--QRKGRKLGRSRLEGLQHSGQDLRSLSP-ASSITSH--- 117
EF V +S G K R L Q + + + S ASSI S
Sbjct: 65 KAEFYQNCEVCNKKFYSEGAYSSHMASKKHRDNLSKFQRNSRIKKLQSEDASSIASSTLS 124
Query: 118 ----------------ASRATFRSTDLEEEAFSDHGFTTEDSYSHYSNTDHESSD----- 156
AS+ T R+ L S HG +E S + + + +S++
Sbjct: 125 MGEPVVDSEIEEEEDLASQLTSRAISLSN--LSLHGRESEPSKTELATSIPQSNEASKSH 182
Query: 157 -----------ESEIGN-DHERISSTECIYCGKNSKQVEANVRHMFNKHGLYLPERSYLT 204
E+E+ +R+S +C++C + + +HM H LY+PER YL
Sbjct: 183 LFTQEPTPEEIEAELARRSSQRLSPRDCLFCAASFSSFDTCKKHMKASHSLYIPEREYLV 242
Query: 205 DLTGLLKYLTDIIIVNKNCLCCKYQGSSVESIRAHMSSKHHCMLPYETKAERAAISQFYD 264
D L YL + I + CL C + S+E++RAHM K H + Y+T+ E+ +S FYD
Sbjct: 243 DEPSLFDYLAEKISIGFTCLTCNREFKSLEAVRAHMQQKGHTSIAYDTEDEQLELSDFYD 302
Query: 265 FSSL--DEAAVSDSSAKHGTSSSVSPVTFANSESIIQTAELHSSEDGADEAEADINSNYA 322
F++ D A D + SS + E + ++ +SS D + I Y
Sbjct: 303 FTTSYPDYAVKQDETVVEEDGSSGE----GDWEDVSDDSD-NSSLDSLEMGRVPIADEY- 356
Query: 323 LVHIDDSGVELQLGNGIKVGHRSMQRYYRQNVPLGSTSPXXXXXXXXXXXXXXXXXQSRQ 382
EL L +G +VGHRS+ RY+RQN+ ST+ +R
Sbjct: 357 ---------ELHLPSGNRVGHRSLSRYFRQNLHSSSTAVGDGASIHQNVARRAMSGNARA 407
Query: 383 MKKAEKE----IKQLEKQHSNKHVRL---QIRRA----------NHQTHFRDELLQ 421
++A + ++ K +S H++ Q RR N + HFRD LLQ
Sbjct: 408 YRQAVETSIAGVRDGRKNYSASHIKSFQDQRRREEFANKMGIKNNTKKHFRDALLQ 463
>7293398 [R] KOG2785 C2H2-type Zn-finger protein
Length = 409
Score = 127 bits (318), Expect = 4e-29
Identities = 111/454 (24%), Positives = 190/454 (41%), Gaps = 89/454 (19%)
Query: 7 FTCNSCMIQFQSSGLQRHHMKTEWHRYNLKRRVAQLAPISASLFAEKLQMSN-------R 59
FTC +C +F S+ +QR+H KT+WHRYNLKRRVAQL P++A F +++ +
Sbjct: 4 FTCLNCDARFASADVQRNHYKTDWHRYNLKRRVAQLPPVTAEEFQQRVLSARSATDAALE 63
Query: 60 EQELN---QVDEFGFPVLKPINHSRGFQRKGRKLGRSRLEGLQHSGQDLRSLSPASSITS 116
EQ L+ F K ++ ++ L R E + SG S S A+S+ +
Sbjct: 64 EQNLSVYCHACRRQFASQKAHDNHLNSRKHKELLARFEREQMTASG---GSASTATSVCT 120
Query: 117 H---------------ASRATFRSTDLEEEAFSDHGFTTEDSYSHYSNTDHESSDESEIG 161
A + + +A +D ED + D E +E E+
Sbjct: 121 RSVVEQRPHPALAAAAAGKGRLAFAERVVKANNDEEMVDED------DDDFEDIEEEEVD 174
Query: 162 ND------HERISSTECIYCGKNSKQVEANVRHMFNKHGLYLPERSYLTDLTGLLKYLTD 215
+D ++ +C++C S+ + N++HM H ++P+ Y TD+ GLL YL +
Sbjct: 175 SDEWDKIPENPLTERDCLFCTHASEDLVENLKHMSVAHSFFIPDTEYCTDIEGLLYYLGE 234
Query: 216 IIIVNKNCLCCKYQGS---SVESIRAHMSSKHHCMLPYETKAERAAISQFYDFSSLDEAA 272
+ CL C +G S++++R HM K HC + +E A A +++YD+SS +
Sbjct: 235 KVANYFICLFCNDRGKTFYSLDAVRKHMIDKGHCQMLHEGVA-LAEYAEYYDYSS----S 289
Query: 273 VSDSSAKHGTSSSVSPVTFANSESIIQTAELHSSEDGADEAEADINSNYALVHIDDSGVE 332
D N+E + DI+ +D +
Sbjct: 290 YPD-----------------NNEGM------------------DIDEEVVPDLLDGDEYQ 314
Query: 333 LQLGNGIKVGHRSMQRYYRQN------VPLGSTSPXXXXXXXXXXXXXXXXXQSRQMKKA 386
L L +G +GHRS+ RYY+Q V + + Q +
Sbjct: 315 LVLPSGAVIGHRSLLRYYKQRLRPERAVVIKKSDRKLHRVLSEYRALGWTQTQQLSAARK 374
Query: 387 EKEIKQLEKQHSNKHVRLQIRRANHQTHFRDELL 420
++I +++ S ++L + Q H+R ++L
Sbjct: 375 ARDIHLMKRVQSKWQMKLGCKANKLQKHYRAQVL 408
>At4g31420 [R] KOG2785 C2H2-type Zn-finger protein
Length = 433
Score = 119 bits (297), Expect = 1e-26
Identities = 91/293 (31%), Positives = 143/293 (48%), Gaps = 40/293 (13%)
Query: 8 TCNSCMIQFQSSGLQRHHMKTEWHRYNLKRRVAQLAPISASLFAEKLQMSNREQELNQVD 67
TCN+C ++F+ + H K++WHRYNLKR+VA + ++ +LF + + S QE N+ +
Sbjct: 27 TCNACNMEFKDEEERNLHYKSDWHRYNLKRKVAGVPGVTEALF--EARQSALAQEKNKSN 84
Query: 68 EFGFPVLKPINHSRGFQRKGRKLGRSRLEGLQHSGQDLRSLSPASSITSHASRATFR--- 124
E P+ ++ KG + ++ + LQ LR +S +SI A R
Sbjct: 85 E------APMLYTCAICAKGYRSSKAHEQHLQSRSHVLR-VSQGTSINGEEDIAIIRQLP 137
Query: 125 ------------STDLEEEAFSDHGFTTE---DSYSHYSNTDHESSDESEIGNDHER--I 167
S D E SD E DS S + + S+++ + D ++ +
Sbjct: 138 RRVQHRGSIDDDSEDEWVEVDSDEELAAEEASDSLSKLNVNESGSAEDMDDDGDADKYEL 197
Query: 168 SSTECIYCGKNSKQVEANVRHMFNKHGLYLPERSYLTDLTGLLKYL-----TDIIIVNKN 222
T C+ C K K +E+ + HM HG ++P+ YL D GLL YL D + + N
Sbjct: 198 DPTCCLMCDKKHKTLESCMLHMHKHHGFFIPDIEYLKDPEGLLTYLGLKVKRDFMCLYCN 257
Query: 223 CLCCKYQGSSVESIRAHMSSKHHCMLPY--ETKAERAAISQFYDFSS--LDEA 271
LC + SS+E++R HM +K HC L Y E A + +FYD+SS +DEA
Sbjct: 258 ELCRPF--SSLEAVRKHMEAKSHCKLHYGDGDDEEDAELEEFYDYSSSYVDEA 308
>At2g24500 [R] KOG2785 C2H2-type Zn-finger protein
Length = 395
Score = 118 bits (295), Expect = 2e-26
Identities = 106/424 (25%), Positives = 173/424 (40%), Gaps = 72/424 (16%)
Query: 9 CNSCMIQFQSSGLQRHHMKTEWHRYNLKRRVAQLAPISASLFAEKLQMSNREQELNQVDE 68
CNSC F+ Q+ H K+EWHRYNLKR++A + ++ +LF E Q + ++++ V+
Sbjct: 6 CNSCNKDFEDDAEQKFHYKSEWHRYNLKRKIAGVPGVTEALF-EARQAAIAQEKVKAVE- 63
Query: 69 FGFPVLKPINHSRGFQRKGRKLGRSRLEGLQHSGQDLRSLSPASSITSHASRATFRST-- 126
P+ +S G KG + ++ + L+ L+ AS+ T +A +
Sbjct: 64 ------APMLYSCGICNKGYRSSKAHEQHLKSKSHVLK----ASTSTGEEDKAIIKQLPP 113
Query: 127 -------------DLEEEAFSDHGF--TTEDSYSHYSNTDHESSDESEIGNDHERISSTE 171
+EEE D +++ N D E D E G + E +
Sbjct: 114 RRVEKNNTAQLKGSIEEEESEDEWIEVDSDEDLDAEMNEDGEEEDMDEDGIEFE-LDPAC 172
Query: 172 CIYCGKNSKQVEANVRHMFNKHGLYLPERSYLTDLTGLLKYL-----TDIIIVNKNCLCC 226
C+ C K K +E + HM HG ++P+ YL D G L YL D + + N LC
Sbjct: 173 CLMCDKKHKTIEKCMVHMHKFHGFFIPDIEYLKDPKGFLTYLGLKVKRDFVCLYCNELCH 232
Query: 227 KYQGSSVESIRAHMSSKHHCMLPYET--KAERAAISQFYDFSSLDEAAVSDSSAKHGTSS 284
+ SS+E++R HM +K HC + Y E A + +FYD+SS D + +
Sbjct: 233 PF--SSLEAVRKHMDAKGHCKVHYGDGGDEEDAELEEFYDYSS--SYVNGDENQMVVSGE 288
Query: 285 SVSPV-TFANSESIIQTAELHSSEDGADEAEADINSNYALVHIDDSGVELQLGNGIKVGH 343
SV+ V F SE +I + + S +G
Sbjct: 289 SVNTVELFGGSELVI-----------TKRTDNKVTSR-------------------TLGS 318
Query: 344 RSMQRYYRQNVPLGSTSPXXXXXXXXXXXXXXXXXQSRQMKKAEKEIKQLEKQHSNKHVR 403
R RYY+Q S QS++ K ++++ K+ + VR
Sbjct: 319 REFMRYYKQKPAPSSQKHIVNSLTSRYKMMGLATVQSKEAIVRMKVMREMNKRGAKSSVR 378
Query: 404 LQIR 407
L ++
Sbjct: 379 LGMK 382
>CE04004 [R] KOG2785 C2H2-type Zn-finger protein
Length = 375
Score = 112 bits (280), Expect = 1e-24
Identities = 89/350 (25%), Positives = 145/350 (41%), Gaps = 61/350 (17%)
Query: 7 FTCNSCMIQFQSSGLQRHHMKTEWHRYNLKRRVAQLAPISASLFAEKLQMSNREQELNQV 66
FTC +C + F+++ LQR H KTEWHRYNLKR+ A+L I LF EK N + +
Sbjct: 7 FTCVTCRVVFETAELQRDHYKTEWHRYNLKRQAAELPAIGIELFNEKAASFNPTKPVVAA 66
Query: 67 DEFGFPVLKPINHSRGFQRKGRKLGRSRLEGLQHSGQDLRSLSPASSITSHASRATFRST 126
++P+ RK K + + + + + +
Sbjct: 67 S------VEPLYCKAC--RKSIKSENAMTDHVASKKHKENEKKIEDDVKKGPKQPRKKPE 118
Query: 127 DLEEEAFS-DHGFTTEDSYSHYSNTDHESSDESEIGNDHERISSTECIYCGKNSKQVEAN 185
+L ++ S ED S TD E E+ N+ + + T C++C + ++
Sbjct: 119 NLPKKPESLKEPENDEDDDSSGWETDDEEEGVEEL-NEDDALPVTSCLFCPQTKPNMDEM 177
Query: 186 VRHMFNKHGLYLPERSYLTDLTGLLKYLTDIIIVNKNCLCC---KYQGSSVESIRAHMSS 242
HM HG LP+R YL+D G L YL + + C+ C K + SV+S + HM
Sbjct: 178 RTHMNFHHGFQLPDRQYLSDELGCLSYLGLKVGAGRCCIFCPDVKARYESVQSCQQHMRD 237
Query: 243 KHHCMLPYETKAERAAISQFYDFSSLDEAAVSDSSAKHGTSSSVSPVTFANSESIIQTAE 302
K HC L + ++ + +YD+S +
Sbjct: 238 KQHCKLRRDPES-MIELDDYYDYSPM---------------------------------- 262
Query: 303 LHSSEDGADEAEADINSNYALVHIDDSGVELQLGNGIKVGHRSMQRYYRQ 352
DG D+ +++ + D G L L +G K+GHR++ RY++Q
Sbjct: 263 ----YDGDDQDKSE---------LFDDGWSLTLPSGAKIGHRNLHRYFKQ 299
>Hs15529978 [R] KOG2785 C2H2-type Zn-finger protein
Length = 477
Score = 102 bits (255), Expect = 8e-22
Identities = 78/278 (28%), Positives = 123/278 (44%), Gaps = 58/278 (20%)
Query: 83 FQRKGRKLGRSRLEGLQHSGQDLRSLSPASSITSHASRATFRSTDLEEEAFSDHGFTTED 142
F+++ +KL + + E + +DL D E+ SD ED
Sbjct: 183 FEQQAKKLAKQQEEDSEEEEEDLDG-------------------DDWEDIDSDEELECED 223
Query: 143 SYSHYSNTDHESSDE-SEIGNDHERISSTECIYCGKNSKQVEANVRHMFNKHGLYLPERS 201
+ + + ++ +E +E G I T+C++C +S + NV HM H ++P+
Sbjct: 224 TEAMDDVVEQDAEEEEAEEGPPLGAIPITDCLFCSHHSSSLMKNVAHMTKDHSFFIPDIE 283
Query: 202 YLTDLTGLLKYLTDIIIVNKNCLCCKYQGS---SVESIRAHMSSKHHCMLPYETKAERAA 258
YL+D+ GL+KYL + + V K CL C +G S E+++AHM+ K HC L + A
Sbjct: 284 YLSDIKGLIKYLGEKVGVGKICLWCNEKGKSFYSTEAVQAHMNDKSHCKLFTDGDA-ALE 342
Query: 259 ISQFYDFSSLDEAAVSDSSAKHGTSSSVSPVTFANSESIIQTAELHSSEDGADEAEADIN 318
+ FYDF S S K G + A+E ++ N
Sbjct: 343 FADFYDFRS------SYPDHKEG-----------------------EDPNKAEELPSEKN 373
Query: 319 SNYALVHIDDSGVELQLGNGIKVGHRSMQRYYRQNVPL 356
Y DD +EL L +G +VGHRS+ RYY+Q L
Sbjct: 374 LEY-----DDETMELILPSGARVGHRSLMRYYKQRFGL 406
Score = 62.4 bits (150), Expect = 1e-09
Identities = 23/49 (46%), Positives = 38/49 (76%)
Query: 7 FTCNSCMIQFQSSGLQRHHMKTEWHRYNLKRRVAQLAPISASLFAEKLQ 55
+TC +C + F+ + +QR H KT+WHRYNL+R+VA +AP++A F E+++
Sbjct: 4 YTCITCRVAFRDADMQRAHYKTDWHRYNLRRKVASMAPVTAEGFQERVR 52
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.314 0.128 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,219,720
Number of Sequences: 60738
Number of extensions: 954489
Number of successful extensions: 4687
Number of sequences better than 1.0e-05: 8
Number of HSP's better than 0.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4639
Number of HSP's gapped (non-prelim): 17
length of query: 421
length of database: 30,389,216
effective HSP length: 109
effective length of query: 312
effective length of database: 23,768,774
effective search space: 7415857488
effective search space used: 7415857488
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)