ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV1507.1 good J KOG0402 Translation, ribosomal structure and biogenesis 60S ribosomal protein L37
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV1507.1 532017 531679 -113
(113 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YPR043w [J] KOG0402 60S ribosomal protein L37 163 3e-41
YJR094w-a [J] KOG0402 60S ribosomal protein L37 163 3e-41
SPBC83.02c [J] KOG0402 60S ribosomal protein L37 135 1e-32
CE22117 [J] KOG0402 60S ribosomal protein L37 134 2e-32
SPBC800.04c [J] KOG0402 60S ribosomal protein L37 131 1e-31
7296944 [J] KOG0402 60S ribosomal protein L37 131 2e-31
Hs4506643 [J] KOG0402 60S ribosomal protein L37 130 2e-31
At3g10950 [J] KOG0402 60S ribosomal protein L37 124 2e-29
At3g60240_2 [J] KOG0402 60S ribosomal protein L37 107 2e-24
ECU07g1005 [J] KOG0402 60S ribosomal protein L37 87 4e-18
Hs20470090 [J] KOG0402 60S ribosomal protein L37 70 5e-13
At2g42160 [R] KOG0804 Cytoplasmic Zn-finger protein BRAP2 (BRCA1... 31 0.32
Hs20538890 [R] KOG1721 FOG: Zn-finger 29 0.93
YKL160w [S] KOG3214 Uncharacterized Zn ribbon-containing protein 28 2.1
Hs16418391 [R] KOG1721 FOG: Zn-finger 28 2.7
Hs13236593 [R] KOG1721 FOG: Zn-finger 28 2.7
Hs11055982 [R] KOG1721 FOG: Zn-finger 28 2.7
ECU10g0720 [R] KOG0509 Ankyrin repeat and DHHC-type Zn-finger do... 28 2.7
CE27129 [NTZ] KOG4286 Dystrophin-like protein 27 3.5
CE26141 [B] KOG1156 N-terminal acetyltransferase 27 3.5
CE05518 [IR] KOG0060 Long-chain acyl-CoA transporter ABC superfa... 27 4.6
SPBC17G9.09 [J] KOG0466 Translation initiation factor 2 gamma su... 27 6.0
7295756 [R] KOG1721 FOG: Zn-finger 27 6.0
Hs7661644 [S] KOG4260 Uncharacterized conserved protein 26 7.9
Hs20561314 [R] KOG1721 FOG: Zn-finger 26 7.9
Hs14760088 [R] KOG1721 FOG: Zn-finger 26 7.9
Hs13375985 [R] KOG3183 Predicted Zn-finger protein 26 7.9
>YPR043w [J] KOG0402 60S ribosomal protein L37
Length = 92
Score = 163 bits (413), Expect = 3e-41
Identities = 77/91 (84%), Positives = 85/91 (92%)
Query: 23 AKRTKKVGITGKYGVRYGSSLRRQVKKLEVQQHATYNCSFCGKTCVKRGAAGVWSCSSCN 82
AKRTKKVGITGKYGVRYGSSLRRQVKKLE+QQHA Y+CSFCGK VKRGAAG+W+CS C
Sbjct: 2 AKRTKKVGITGKYGVRYGSSLRRQVKKLEIQQHARYDCSFCGKKTVKRGAAGIWTCSCCK 61
Query: 83 RTIAGGAYTLSTAAAATVRSTIRRLRDMAEA 113
+T+AGGAYT+STAAAATVRSTIRRLR+M EA
Sbjct: 62 KTVAGGAYTVSTAAAATVRSTIRRLREMVEA 92
>YJR094w-a [J] KOG0402 60S ribosomal protein L37
Length = 92
Score = 163 bits (413), Expect = 3e-41
Identities = 77/91 (84%), Positives = 85/91 (92%)
Query: 23 AKRTKKVGITGKYGVRYGSSLRRQVKKLEVQQHATYNCSFCGKTCVKRGAAGVWSCSSCN 82
AKRTKKVGITGKYGVRYGSSLRRQVKKLE+QQHA Y+CSFCGK VKRGAAG+W+CS C
Sbjct: 2 AKRTKKVGITGKYGVRYGSSLRRQVKKLEIQQHARYDCSFCGKKTVKRGAAGIWTCSCCK 61
Query: 83 RTIAGGAYTLSTAAAATVRSTIRRLRDMAEA 113
+T+AGGAYT+STAAAATVRSTIRRLR+M EA
Sbjct: 62 KTVAGGAYTVSTAAAATVRSTIRRLREMVEA 92
>SPBC83.02c [J] KOG0402 60S ribosomal protein L37
Length = 94
Score = 135 bits (339), Expect = 1e-32
Identities = 62/91 (68%), Positives = 77/91 (84%), Gaps = 2/91 (2%)
Query: 24 KRTKKVGITGKYGVRYGSSLRRQVKKLEVQQHATYNCSFCGKTCVKRGAAGVWSCS--SC 81
KRTKKVG+TGKYGVRYG+SLRR V+K+EVQQH+ Y C FCG+ VKR AAG+W CS C
Sbjct: 3 KRTKKVGVTGKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRLTVKRTAAGIWKCSGKGC 62
Query: 82 NRTIAGGAYTLSTAAAATVRSTIRRLRDMAE 112
++T+AGGA+T++TAAA + RSTIRRLR+M E
Sbjct: 63 SKTLAGGAWTVTTAAATSARSTIRRLREMVE 93
>CE22117 [J] KOG0402 60S ribosomal protein L37
Length = 91
Score = 134 bits (337), Expect = 2e-32
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 23 AKRTKKVGITGKYGVRYGSSLRRQVKKLEVQQHATYNCSFCGKTCVKRGAAGVWSCSSCN 82
AKRTKKVGI GKYG RYG+SLR+ KKLEV QH+ Y CSFCGK +KR A G+W+C+ C+
Sbjct: 2 AKRTKKVGIVGKYGTRYGASLRKMAKKLEVAQHSRYTCSFCGKEAMKRKATGIWNCAKCH 61
Query: 83 RTIAGGAYTLSTAAAATVRSTIRRLRDMAE 112
+ +AGGAY T AATVRSTIRRLRD+ E
Sbjct: 62 KVVAGGAYVYGTVTAATVRSTIRRLRDLKE 91
>SPBC800.04c [J] KOG0402 60S ribosomal protein L37
Length = 94
Score = 131 bits (330), Expect = 1e-31
Identities = 60/91 (65%), Positives = 75/91 (81%), Gaps = 2/91 (2%)
Query: 24 KRTKKVGITGKYGVRYGSSLRRQVKKLEVQQHATYNCSFCGKTCVKRGAAGVWSCS--SC 81
KRTKKVG+TGKYGVRYG+SLRR V+K+EVQQH+ Y C FCG+ VKR AAG+W C+ C
Sbjct: 3 KRTKKVGVTGKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRNTVKRTAAGIWCCNGKGC 62
Query: 82 NRTIAGGAYTLSTAAAATVRSTIRRLRDMAE 112
+ +AGGA+T++TAAA + RSTIRRLR+M E
Sbjct: 63 KKVLAGGAWTVTTAAATSARSTIRRLREMVE 93
>7296944 [J] KOG0402 60S ribosomal protein L37
Length = 92
Score = 131 bits (329), Expect = 2e-31
Identities = 58/90 (64%), Positives = 70/90 (77%)
Query: 23 AKRTKKVGITGKYGVRYGSSLRRQVKKLEVQQHATYNCSFCGKTCVKRGAAGVWSCSSCN 82
AKRTKKVGI GKYG RYG+SLR+ VKK+E+ QH+ Y CSFCGK +KR G+WSC C
Sbjct: 2 AKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVGIWSCKRCK 61
Query: 83 RTIAGGAYTLSTAAAATVRSTIRRLRDMAE 112
RT+AGGA+ ST AAA+VRS +RRLR+ E
Sbjct: 62 RTVAGGAWVYSTTAAASVRSAVRRLRETKE 91
>Hs4506643 [J] KOG0402 60S ribosomal protein L37
Length = 92
Score = 130 bits (328), Expect = 2e-31
Identities = 57/90 (63%), Positives = 73/90 (80%)
Query: 23 AKRTKKVGITGKYGVRYGSSLRRQVKKLEVQQHATYNCSFCGKTCVKRGAAGVWSCSSCN 82
AKRTKKVGI GKYG RYG+SLR+ VKK+E+ QHA Y CSFCGKT +KR A G+W C SC
Sbjct: 2 AKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCM 61
Query: 83 RTIAGGAYTLSTAAAATVRSTIRRLRDMAE 112
+T+AGGA+T +T +A TV+S IRRL+++ +
Sbjct: 62 KTVAGGAWTYNTTSAVTVKSAIRRLKELKD 91
>At3g10950 [J] KOG0402 60S ribosomal protein L37
Length = 92
Score = 124 bits (312), Expect = 2e-29
Identities = 56/90 (62%), Positives = 67/90 (74%)
Query: 24 KRTKKVGITGKYGVRYGSSLRRQVKKLEVQQHATYNCSFCGKTCVKRGAAGVWSCSSCNR 83
KRTKK I GKYG RYG+SLR+Q+KK+EV QH Y C FCGK VKR G+W C C +
Sbjct: 3 KRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDCGK 62
Query: 84 TIAGGAYTLSTAAAATVRSTIRRLRDMAEA 113
AGGAYT++TA+A TVRSTIRRLR+ E+
Sbjct: 63 VKAGGAYTMNTASAVTVRSTIRRLREQTES 92
>At3g60240_2 [J] KOG0402 60S ribosomal protein L37
Length = 78
Score = 107 bits (268), Expect = 2e-24
Identities = 47/77 (61%), Positives = 59/77 (76%)
Query: 36 GVRYGSSLRRQVKKLEVQQHATYNCSFCGKTCVKRGAAGVWSCSSCNRTIAGGAYTLSTA 95
G RYG+S+R+Q+KK+EV QH+ Y C FCGK VKR A G+W C C + AGGAYT++TA
Sbjct: 1 GTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDCGKVKAGGAYTMNTA 60
Query: 96 AAATVRSTIRRLRDMAE 112
+A TVRSTIRRLR+ E
Sbjct: 61 SAVTVRSTIRRLREQIE 77
>ECU07g1005 [J] KOG0402 60S ribosomal protein L37
Length = 88
Score = 87.0 bits (214), Expect = 4e-18
Identities = 39/72 (54%), Positives = 48/72 (66%)
Query: 25 RTKKVGITGKYGVRYGSSLRRQVKKLEVQQHATYNCSFCGKTCVKRGAAGVWSCSSCNRT 84
RTKKVGI G +G RYGS+LR+++K + Q A Y C CGK VKR A G+W C SC R
Sbjct: 3 RTKKVGIAGSFGARYGSTLRKRMKAVLETQRAKYICEACGKKTVKREAVGIWKCRSCRRV 62
Query: 85 IAGGAYTLSTAA 96
AGG+Y +T A
Sbjct: 63 FAGGSYAKTTPA 74
>Hs20470090 [J] KOG0402 60S ribosomal protein L37
Length = 93
Score = 70.1 bits (170), Expect = 5e-13
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 24 KRTKKVGITGKYGVRYGSSLRRQVKKLEVQQHATYNCSFCGKTCVKRGAAGVWSCSSCNR 83
K KKV I KYG YG+SL++ VKK+ + QHA CSFCGK +KR A G W C
Sbjct: 3 KANKKVRIINKYGTHYGASLQKMVKKIIIHQHAEDTCSFCGKIRIKRQAVGTWCCGDLAL 62
Query: 84 TIAGGAYTLSTAAAATVRSTIRRLRDMAE 112
+ G + A IRRL+++ +
Sbjct: 63 WLLDGNGSCKVA--------IRRLKELED 83
>At2g42160 [R] KOG0804 Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated
protein)
Length = 506
Score = 30.8 bits (68), Expect = 0.32
Identities = 16/36 (44%), Positives = 18/36 (49%), Gaps = 6/36 (16%)
Query: 46 QVKKLEVQQHATYNCSFCGKTCVKRGAAGVWSCSSC 81
QV +L QQ NCS CGKT VW+C C
Sbjct: 211 QVCRLCQQQDEILNCSICGKT------ENVWACLVC 240
>Hs20538890 [R] KOG1721 FOG: Zn-finger
Length = 1242
Score = 29.3 bits (64), Expect = 0.93
Identities = 15/51 (29%), Positives = 25/51 (48%), Gaps = 3/51 (5%)
Query: 33 GKYGVRYGSSLRRQVKKLEVQQHATYNCSFCGKTCVKRGAAGVWSCSSCNR 83
GK +R SS K++ +++ Y C CGKTC+ + C+ C +
Sbjct: 637 GKAFIR--SSTLTSHKRIHMEERP-YKCEECGKTCIIHIGEKPYKCNECGK 684
>YKL160w [S] KOG3214 Uncharacterized Zn ribbon-containing protein
Length = 145
Score = 28.1 bits (61), Expect = 2.1
Identities = 16/58 (27%), Positives = 25/58 (42%), Gaps = 6/58 (10%)
Query: 42 SLRRQVKKLEVQQHATYNCSFCGK------TCVKRGAAGVWSCSSCNRTIAGGAYTLS 93
S R+ K+L + +NC FC T K+ + G SC C ++ +LS
Sbjct: 7 STRKPTKRLVQKLDTKFNCLFCNHEKSVSCTLDKKNSIGTLSCKICGQSFQTRINSLS 64
>Hs16418391 [R] KOG1721 FOG: Zn-finger
Length = 472
Score = 27.7 bits (60), Expect = 2.7
Identities = 13/44 (29%), Positives = 20/44 (44%), Gaps = 10/44 (22%)
Query: 57 TYNCSFCGKTCVKRGAAGV----------WSCSSCNRTIAGGAY 90
TY CS CGKT +++ + + CS C + A +Y
Sbjct: 418 TYRCSECGKTFIRKLNLSLHKKTHTGQKPYGCSECGKAFADRSY 461
>Hs13236593 [R] KOG1721 FOG: Zn-finger
Length = 375
Score = 27.7 bits (60), Expect = 2.7
Identities = 18/65 (27%), Positives = 23/65 (34%), Gaps = 10/65 (15%)
Query: 36 GVRYGSSLRRQVKKLEVQQHATYNCSFCGKTCVKRGAAGV----------WSCSSCNRTI 85
G Y S V K Y C+ CGKT R V + CS C +T
Sbjct: 186 GKSYSSRSYLAVHKRIHNGEKPYECNDCGKTFSSRSYLTVHKRIHNGEKPYECSDCGKTF 245
Query: 86 AGGAY 90
+ +Y
Sbjct: 246 SNSSY 250
>Hs11055982 [R] KOG1721 FOG: Zn-finger
Length = 717
Score = 27.7 bits (60), Expect = 2.7
Identities = 11/30 (36%), Positives = 18/30 (59%), Gaps = 1/30 (3%)
Query: 41 SSLRRQVKKLEVQQHATYNCSFCGKTCVKR 70
S+L + ++ L + + Y C FCGK V+R
Sbjct: 624 SNLNKHIR-LHAEGNTPYRCEFCGKVLVRR 652
>ECU10g0720 [R] KOG0509 Ankyrin repeat and DHHC-type Zn-finger domain
containing proteins
Length = 393
Score = 27.7 bits (60), Expect = 2.7
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 61 SFCGKTCVKRGAAGVWSCSSCNRTIAG 87
+FC TC+ R G CS CNR I G
Sbjct: 302 NFC-YTCLARKTGGTKHCSICNRCILG 327
>CE27129 [NTZ] KOG4286 Dystrophin-like protein
Length = 3674
Score = 27.3 bits (59), Expect = 3.5
Identities = 13/32 (40%), Positives = 17/32 (52%)
Query: 80 SCNRTIAGGAYTLSTAAAATVRSTIRRLRDMA 111
SC +T+A T++ A A R I LR MA
Sbjct: 2025 SCEKTLAKNEMTINIAQAENARERITMLRQMA 2056
>CE26141 [B] KOG1156 N-terminal acetyltransferase
Length = 816
Score = 27.3 bits (59), Expect = 3.5
Identities = 14/53 (26%), Positives = 24/53 (44%), Gaps = 1/53 (1%)
Query: 34 KYGVRYGSSLRRQVKKLEVQQHATYNCSFCGKTCVKRGAAGVWSCSSCNRTIA 86
K+ + + ++ LE Q+ + + C FC KT K A +S S I+
Sbjct: 690 KFKIEHQHDFAHRLASLETQKFSNF-CKFCWKTAQKLDAEAQYSIDSSTNLIS 741
>CE05518 [IR] KOG0060 Long-chain acyl-CoA transporter ABC superfamily
(involved in peroxisome organization and biogenesis)
Length = 660
Score = 26.9 bits (58), Expect = 4.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 61 SFCGKTCVKRGAAGVWSCSS 80
S CGK+ + R AG+W CSS
Sbjct: 459 SGCGKSSLLRMFAGLWHCSS 478
>SPBC17G9.09 [J] KOG0466 Translation initiation factor 2 gamma subunit
(eIF-2gamma; GTPase)
Length = 446
Score = 26.6 bits (57), Expect = 6.0
Identities = 25/85 (29%), Positives = 34/85 (39%), Gaps = 15/85 (17%)
Query: 7 TIGIGRNEYTIHFIFRAKRTKKVGITGKYGVRYGSSLRRQVK-KLEVQQHATYNCSFCGK 65
TI IG TI + K T I+G + VR+ + L R + KL Y CS +
Sbjct: 23 TINIG----TIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLGYANAKIYKCS--NE 76
Query: 66 TCVKRGAAGVWS--------CSSCN 82
C + G +S C CN
Sbjct: 77 ECPRPGCYRSYSSNKEDHPPCEICN 101
>7295756 [R] KOG1721 FOG: Zn-finger
Length = 714
Score = 26.6 bits (57), Expect = 6.0
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 10/44 (22%)
Query: 60 CSFCGKTCVKRGAAGV----------WSCSSCNRTIAGGAYTLS 93
C FCGK+ +R + V ++C C++T +Y LS
Sbjct: 582 CEFCGKSFSRRYSLVVHRRIHTREKNYACQYCDKTFRASSYLLS 625
>Hs7661644 [S] KOG4260 Uncharacterized conserved protein
Length = 417
Score = 26.2 bits (56), Expect = 7.9
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 52 VQQHATYNCSFCGKTCVKRGAAGVWSCSSCN 82
V +Y C C K C+ AG C C+
Sbjct: 263 VNTEGSYECRDCAKACLGCMGAGPGRCKKCS 293
>Hs20561314 [R] KOG1721 FOG: Zn-finger
Length = 1286
Score = 26.2 bits (56), Expect = 7.9
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 47 VKKLEVQQHATYNCSFCGKTCVKRGAAGVWSCSSCNRTIA 86
+++ E+Q Y C C V R ++CSSCN T A
Sbjct: 724 LERPELQHTPLYACELCAT--VMRIIKKSFACSSCNYTFA 761
>Hs14760088 [R] KOG1721 FOG: Zn-finger
Length = 479
Score = 26.2 bits (56), Expect = 7.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Query: 57 TYNCSFCGKTC 67
TY C FCGK C
Sbjct: 9 TYKCKFCGKAC 19
>Hs13375985 [R] KOG3183 Predicted Zn-finger protein
Length = 268
Score = 26.2 bits (56), Expect = 7.9
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 48 KKLEVQQHATYNCSFCGKTCVKRGAAGVWSCSSCNR 83
++L+ QH +Y CSF K C +R V C C +
Sbjct: 52 ERLKTDQHTSYPCSF--KDCAERELVAV-ICPYCEK 84
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.323 0.132 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,983,114
Number of Sequences: 60738
Number of extensions: 209202
Number of successful extensions: 840
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 815
Number of HSP's gapped (non-prelim): 29
length of query: 113
length of database: 30,389,216
effective HSP length: 89
effective length of query: 24
effective length of database: 24,983,534
effective search space: 599604816
effective search space used: 599604816
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)