ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV1542 check: MH R KOG4574 General function prediction only RNA-binding protein (contains RRM and Pumilio-like repeats)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV1542 541992 545273 1094
(1094 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YJR091c [R] KOG4574 RNA-binding protein (contains RRM and Pumili... 976 0.0
YPR042c [R] KOG4574 RNA-binding protein (contains RRM and Pumili... 719 0.0
SPBC56F2.08c [R] KOG4574 RNA-binding protein (contains RRM and P... 270 9e-72
SPBP35G2.14 [R] KOG4574 RNA-binding protein (contains RRM and Pu... 253 2e-66
YGL014w [J] KOG2049 Translational repressor MPT5/PUF4 and relate... 77 1e-13
YGL178w [J] KOG2049 Translational repressor MPT5/PUF4 and relate... 70 2e-11
SPAC6G9.14 [J] KOG2049 Translational repressor MPT5/PUF4 and rel... 66 3e-10
At1g35730 [J] KOG2049 Translational repressor MPT5/PUF4 and rela... 65 6e-10
YLL013c [J] KOG1488 Translational repressor Pumilio/PUF3 and rel... 65 8e-10
At1g35750 [J] KOG2049 Translational repressor MPT5/PUF4 and rela... 63 3e-09
At3g10360 [J] KOG1488 Translational repressor Pumilio/PUF3 and r... 62 5e-09
At4g08840 [J] KOG2049 Translational repressor MPT5/PUF4 and rela... 60 1e-08
At4g25880 [J] KOG1488 Translational repressor Pumilio/PUF3 and r... 59 4e-08
At2g29200 [J] KOG1488 Translational repressor Pumilio/PUF3 and r... 59 5e-08
SPAC4G8.03c [J] KOG2049 Translational repressor MPT5/PUF4 and re... 58 7e-08
ECU11g1730 [J] KOG1488 Translational repressor Pumilio/PUF3 and ... 58 9e-08
CE05044 [J] KOG1488 Translational repressor Pumilio/PUF3 and rel... 58 9e-08
Hs13491168 [J] KOG1488 Translational repressor Pumilio/PUF3 and ... 57 2e-07
SPAC1687.22c [J] KOG1488 Translational repressor Pumilio/PUF3 an... 56 3e-07
At3g20250 [J] KOG1488 Translational repressor Pumilio/PUF3 and r... 55 5e-07
At2g29190 [J] KOG1488 Translational repressor Pumilio/PUF3 and r... 55 6e-07
At5g56510 [J] KOG2049 Translational repressor MPT5/PUF4 and rela... 54 1e-06
Hs13491166 [J] KOG1488 Translational repressor Pumilio/PUF3 and ... 52 7e-06
At2g29140 [J] KOG1488 Translational repressor Pumilio/PUF3 and r... 52 7e-06
>YJR091c [R] KOG4574 RNA-binding protein (contains RRM and Pumilio-like
repeats)
Length = 1091
Score = 976 bits (2524), Expect = 0.0
Identities = 567/1133 (50%), Positives = 693/1133 (61%), Gaps = 118/1133 (10%)
Query: 5 KASGDSMSGLSNIPEVIDPGVTIPIYEDDFTLSGGNNIDQLPIQPQKLGSYRSKAGKFSN 64
K+ +++ LSNIPEVIDPG+TIPIYE+++ +G +N QL QPQKLGSYRS+AGKFSN
Sbjct: 3 KSKQMNINNLSNIPEVIDPGITIPIYEEEYENNGESN-SQLQQQPQKLGSYRSRAGKFSN 61
Query: 65 TLSNLLPSISAKLHHNKKGSKGSSAV--GEGNHSGELSSDDATANTSEQTSK--SGSIAQ 120
TLSNLLPSISAKLHH+KK S G + N+S + + T S SK SI
Sbjct: 62 TLSNLLPSISAKLHHSKKNSHGKNGAEFSSSNNSSQSTVASKTPRASPSRSKMMESSIDG 121
Query: 121 INLSVPGHITPPLDVDYNQAIHLPDSSSLLVPSQPRLSGDSFTFATNSVPLQPTASNTIS 180
+ + PG +TPP D++ + +H PDSS+ + PR S DSF ++P Q IS
Sbjct: 122 VTMDRPGSLTPPQDME--KLVHFPDSSNNFLIPAPRGSSDSF-----NLPHQ------IS 168
Query: 181 RTRNNTVSSQITXXXXXXXXXXXXXXXWFPNDMSVNPMSPPGIQXXXXXXXXXXXXXXXX 240
RTRNNT+SSQIT W N + +PM +Q
Sbjct: 169 RTRNNTMSSQITSISSIAPKPRTSSGIWSSNASANDPMQQHLLQQLQPTTSNNTTNS--- 225
Query: 241 SHLAPGTYSPYEATGNYFDLNTSSN---------NINNLGVPGATTAGAHQFQSQQIGGV 291
T + Y YFD S++ N NNL +P + V
Sbjct: 226 -----NTLNDYSTKTAYFDNMVSTSGSQMADNKMNTNNLAIPNS---------------V 265
Query: 292 W-NSRPRSQSNASSIYTDAPTYDQMDTRSRASTFIIPPSMDPQLKATAASTNPIVQDDMD 350
W N+R RSQSNASSIYTDAP Y+Q S +S + IP +P++ D++D
Sbjct: 266 WSNTRQRSQSNASSIYTDAPLYEQPARASISSHYTIP-----------TQESPLIADEID 314
Query: 351 SRSINWVTTDPSVPSINHISNLLPTNTISISNVFSLQQQQPHLSNTVNLTSTSLATLCLK 410
+SINWVT DP+VPSIN ISNLLPTNTISISNVF LQ QQP L+N +NLTSTSLATLC K
Sbjct: 315 PQSINWVTMDPTVPSINQISNLLPTNTISISNVFPLQHQQPQLNNAINLTSTSLATLCSK 374
Query: 411 FGTVISARTLRGVNMAIVEFASVEAAIKAKEALNGKEVSLVGAPSTVSFAKVXXXXXX-- 468
+G VISARTLR +NMA+VEF+SVE+A+KA ++L GKEVS++GAPS +SFAK+
Sbjct: 375 YGEVISARTLRNLNMALVEFSSVESAVKALDSLQGKEVSMIGAPSKISFAKILPMHQQPP 434
Query: 469 XXXXXXXXXXXXXXSTAINPQSLLQEQLFSGAVQFQQQGNVSVPSFTGNTHAQ-----SS 523
+ + PQ LLQEQLF+GAV FQQQGNVS+P F + SS
Sbjct: 435 QFLLNSQGLPLGLENNNLQPQPLLQEQLFNGAVTFQQQGNVSIPVFNQQSQQSQHQNHSS 494
Query: 524 SQAFVSPT------------NPSSSNSEKEQCPFPLPPPSFKENITLLNDTINKFGINYD 571
A S N ++S +EKEQCPFPLPPP+ E LL + I F N D
Sbjct: 495 GSAGFSNVLHGYNNNNSMHGNNNNSANEKEQCPFPLPPPNVNEKEDLLREIIELFEANSD 554
Query: 572 TSQYQHIIANAIEYNGTSDTTDFGPLPEPLSTREFDAPRLRELRKSIDSGQMSDLEIEQL 631
Q +I ++ + GTSDT +FGPLPEPLS REFD P+LRELRKSIDS SDLEIEQL
Sbjct: 555 EYQINSLIKKSLNHKGTSDTQNFGPLPEPLSGREFDPPKLRELRKSIDSNAFSDLEIEQL 614
Query: 632 VLAMLDEIPELSSDYLGNTIVQKLFEHASSVIKDIMLRKTSVYLTSMGVHKNGTWACQKM 691
+AMLDE+PELSSDYLGNTIVQKLFEH+S +IKDIMLRKTS YLTSMGVHKNGTWACQKM
Sbjct: 615 AIAMLDELPELSSDYLGNTIVQKLFEHSSDIIKDIMLRKTSKYLTSMGVHKNGTWACQKM 674
Query: 692 ITNADTPRQKMYVANGVYKYCTPLFNDQFGNYVIQCVLKFGFPWNNFIFENIVSNFWNIV 751
IT A TPRQ M V GV YCTPL NDQFGNYVIQCVLKFGFPWN FIFE+I++NFW IV
Sbjct: 675 ITMAHTPRQIMQVTQGVKDYCTPLINDQFGNYVIQCVLKFGFPWNQFIFESIIANFWVIV 734
Query: 752 QNRYGARAVRACLEAHDIITQEQLLLLSAMIVFFVKYLATNSNGALLVTWFLDTCTLPKR 811
QNRYGARAVRACLEAHDI+T EQ ++LSAMIV + +YL+TNSNGALLVTWFLDT LP R
Sbjct: 735 QNRYGARAVRACLEAHDIVTPEQSIVLSAMIVTYAEYLSTNSNGALLVTWFLDTSVLPNR 794
Query: 812 HSILAEALLPNIFELGCHKLASLTILKILNYRGDEVAKRAILDTIFGPMDNEISSKPPQL 871
HSILA L I EL H+LASLTILK+LNYRGD+ A++ ILD++FG + N S PP+
Sbjct: 795 HSILAPRLTKRIVELCGHRLASLTILKVLNYRGDDNARKIILDSLFGNV-NAHDSSPPKE 853
Query: 872 LYQLLSDTNYGPSFVYKVLSIPMLEGDVRHHVIEQVRYILTTESNITQHRRLLEEVGL-- 929
L +LL +TNYGP+FV+KVL++P+LE D+R H+I+QVR +LT + I RRLLEEVGL
Sbjct: 854 LTKLLCETNYGPTFVHKVLAMPLLEDDLRAHIIKQVRKVLTDSTQIQPSRRLLEEVGLAS 913
Query: 930 --NAINNQPSTAQTKPRMSISHVFG--NDHPQHMRTXXXXXXXXXXXXXXXXXXXXXXXX 985
+ N Q SISH+F + QHMR
Sbjct: 914 PSSTHNKTKQQQQQHHNSSISHMFATPDTSGQHMR----------------GLSVSSVKS 957
Query: 986 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISGQASYYTYPGMFPASQ-PYQYSTSTSGL 1044
+ Y++YPG+FP S S +
Sbjct: 958 GGSKHTTMNTTTTNGSSASTLSPGQPLNANSNSSMGYFSYPGVFPVSGFSGNASNGYAMN 1017
Query: 1045 NDDLVSNFDMLTFNNGTQISLPQLTMN-------------GQPLPHSQNRHHN 1084
NDDL S FDML FNNGT++SLPQL++ G PH+ N ++N
Sbjct: 1018 NDDLSSQFDMLNFNNGTRLSLPQLSLTNHNNTTMELVNNVGSSQPHTNNNNNN 1070
>YPR042c [R] KOG4574 RNA-binding protein (contains RRM and Pumilio-like
repeats)
Length = 1075
Score = 719 bits (1857), Expect = 0.0
Identities = 456/1109 (41%), Positives = 601/1109 (54%), Gaps = 142/1109 (12%)
Query: 14 LSNIPEVIDPGVTIPIYEDDFTLSGGNNIDQLPIQ------------PQKLGSYRSKAGK 61
LSNIPEVIDPG+TIPIYE+D N + ++ PQK+GSYR++AG+
Sbjct: 11 LSNIPEVIDPGITIPIYEEDIRNDTRMNTNARSVRVSDKRGRSSSTSPQKIGSYRTRAGR 70
Query: 62 FSNTLSNLLPSISAKLHHNKKGSKGSSAVGEGNHSGELSSDDATANTSEQTSKSGSIAQI 121
FS+TL+NLLPSISAKLHH+KK
Sbjct: 71 FSDTLTNLLPSISAKLHHSKK--------------------------------------- 91
Query: 122 NLSVPGHITPPLDVDYNQAIHLPDSSSLLVPSQPRLSGDSFTFATNSVPLQPTASNTISR 181
S P + PP PDS + + PR+S DSFT AT PL ++ T +R
Sbjct: 92 --STPVVVVPPTS-------STPDSLNSTTYA-PRVSSDSFTVAT---PLSLQSTTTRTR 138
Query: 182 TRNNTVSSQITXXXXXXXXXXXXXXX--WFPNDMSVNPMSPPGIQXXXXXXXXXXXXXXX 239
TRNNTVSSQIT W N S SP
Sbjct: 139 TRNNTVSSQITASSSLTTDVGNATSANIWSANAESNTSSSP------------LFDYPLA 186
Query: 240 XSHLAPGTYSPYEATGNYFDLNTSSNN--INNLGVPGA-TTAGAHQFQSQQIGGVWNSRP 296
S+ P T +++T NY T+ N + G P ++AG V R
Sbjct: 187 TSYFEPLTR--FKSTDNYTLPQTAQLNSFLEKNGNPNIWSSAGNSNTDHLNTPIVNRQRS 244
Query: 297 RSQSNASSIYTDAPTYDQMDTRSRASTFIIPPSMDPQLKATAASTNPIVQDDMDSRSINW 356
+SQS + +YTDAP Y Q + +PP + + S +P++ DD+D SINW
Sbjct: 245 QSQSTTNRVYTDAPYYQQPAQNYQVQ---VPPRVPK-----STSISPVILDDVDPASINW 296
Query: 357 VTTDPSVPSINHISNLLPTNTISISNVFSLQQQQPHLSNTVNLTSTSLATLCLKFGTVIS 416
+T + VP +N IS LLPTNTISISNVF LQ Q H N VNLTSTSLATLC ++G V+S
Sbjct: 297 ITANQKVPLVNQISALLPTNTISISNVFPLQPTQQHQQNAVNLTSTSLATLCSQYGKVLS 356
Query: 417 ARTLRGVNMAIVEFASVEAAIKAKEALNGKEVSLVGAPSTVSFAKVXXXXXXXXXXXXXX 476
ARTLRG+NMA+VEF++VE+AI A EAL GKE+S VGAPSTVSFA+V
Sbjct: 357 ARTLRGLNMALVEFSTVESAICALEALQGKELSKVGAPSTVSFARVLPMYEQPLNVNGFN 416
Query: 477 XXXXXXSTAINPQSLLQEQLFSGAVQFQQQGNVSVPSFTGN-THAQSSSQAFVSPTNPSS 535
Q LLQEQL G + +Q Q ++ P T + + +PT S
Sbjct: 417 NT--------PKQPLLQEQLNHGVLNYQLQQSLQQPELQQQPTSFNQPNLTYCNPTQNLS 468
Query: 536 ----SNSEKEQCPFPLPPPSFKENITLLNDTINKFGINYDTSQYQHIIANAIEYNGTSDT 591
S++E E PFPLPPPS ++ + TI+ F + YD + H++ NA++ G SDT
Sbjct: 469 HLQLSSNENEPYPFPLPPPSLSDSKKDILHTISSFKLEYDHLELNHLLQNALKNKGVSDT 528
Query: 592 TDFGPLPE-----PLSTREFDAPRLRELRKSIDSGQMSDLEIEQLVLAMLDEIPELSSDY 646
FGPLPE P FDAP+LRELRK DS +S +E+EQL + MLD++PELSSDY
Sbjct: 529 NYFGPLPEHNSKVPKRKDTFDAPKLRELRKQFDSNSLSTIEMEQLAIVMLDQLPELSSDY 588
Query: 647 LGNTIVQKLFEHASSVIKDIMLRKTSVYLTSMGVHKNGTWACQKMITNADTPRQKMYVAN 706
LGNT++QKLFE++S++I+DIMLRK + YLTSMGVHKNGTW CQK+I A+TPRQ V +
Sbjct: 589 LGNTVIQKLFENSSNIIRDIMLRKCNKYLTSMGVHKNGTWVCQKIIKMANTPRQINLVTS 648
Query: 707 GVYKYCTPLFNDQFGNYVIQCVLKFGFPWNNFIFENIVSNFWNIVQNRYGARAVRACLEA 766
GV YCTPLFNDQFGNYVIQ +LKFGFPWN+FIFE+++S+FW IVQNRYG+RAVRACLEA
Sbjct: 649 GVSDYCTPLFNDQFGNYVIQGILKFGFPWNSFIFESVLSHFWTIVQNRYGSRAVRACLEA 708
Query: 767 HDIITQEQLLLLSAMIVFFVKYLATNSNGALLVTWFLDTCTLPKRHSILAEALL-PNIFE 825
IITQ QLL ++++I+ YLAT++NG LL+TW LDTCTLP ++ IL + L+ N+ +
Sbjct: 709 DSIITQCQLLTITSLIIVLSPYLATDTNGTLLITWLLDTCTLPNKNLILCDKLVNKNLVK 768
Query: 826 LGCHKLASLTILKILNYRGDE---VAKRAILDTIFGPMDNEISSKPPQLLYQLLSDTNYG 882
L CHKL SLT+LKILN RG E ++K I+ IF D ISS +L+Q+L + NYG
Sbjct: 769 LCCHKLGSLTVLKILNLRGGEEEALSKNKIIHAIF---DGPISS--DSILFQILDEGNYG 823
Query: 883 PSFVYKVLSIPMLEGDVRHHVIEQVRYILTTESNITQHRRLLEEVGLNAINNQPSTAQTK 942
P+F+YKVL+ +L+ VR I ++R ++ + Q R+LLEEVGL++ P +
Sbjct: 824 PTFIYKVLTSRILDNSVRDEAITKIRQLILNSNINLQSRQLLEEVGLSSAGISPKQSSKN 883
Query: 943 PRMSISHVFGNDHPQHMRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1002
R HPQ +
Sbjct: 884 HR--------KQHPQGFHS--------------PGRARGVSVSSVRSSNSRHNSVIQMNN 921
Query: 1003 XXXXXXXXXXXXGISGQASYYTYPGMFPASQPYQYSTSTSGLNDDLVSNFDMLTFNNGTQ 1062
+S SY+ + + Q S D+L S FD NGT
Sbjct: 922 AGPTPALNFNPAPMSEINSYFNNQQVVYSGNQNQNQNGNSNGLDELNSQFDSFRIANGTN 981
Query: 1063 ISLPQLTMNGQPLPHSQNRHHNGQFGDGM 1091
+SLP +N + ++ N ++N + M
Sbjct: 982 LSLP--IVNLPNVSNNNNNYNNSGYSSQM 1008
>SPBC56F2.08c [R] KOG4574 RNA-binding protein (contains RRM and Pumilio-like
repeats)
Length = 661
Score = 270 bits (690), Expect = 9e-72
Identities = 188/544 (34%), Positives = 281/544 (51%), Gaps = 67/544 (12%)
Query: 397 VNLTSTSLATLCLKFGTVISARTLRGVNMAIVEFASVEAAIKAKEALNGKEVSLVGAPST 456
V +S+++ L +G V L N AIV + S+ +AI A++AL+ + V P
Sbjct: 9 VGTSSSAIHALFSAYGNVKDIWMLSPDNSAIVSYESLSSAIVARDALHNRPVFENHGPVQ 68
Query: 457 VSFAKVXXXXXXXXXXXXXXXXXXXXSTAINPQSLLQEQLFSGAVQFQQQGNVSVPSFTG 516
V AK P S + + AV S P+ T
Sbjct: 69 VMLAK--------------------------PSSNYEPGNITAAV--------SPPASTS 94
Query: 517 NTHAQSSSQAFVSPTNPSSSNSEKEQCPFPLPPPSFKENITLLNDTINKFGINYDTSQYQ 576
S SPT+ +S K + +L + +F + +
Sbjct: 95 -----SKDGVVCSPTSTGASQL-------------LKSRVDIL-EVARQFEMRINLDIVD 135
Query: 577 HIIANAIEYNGTSDTTDFGPLPEPLSTREFDAPRLRELRKSIDSGQMSDLEIEQLVLAML 636
+IA+AIE N + T+ P E L +R+F+A +LRE+RK+IDSG + EIE + +ML
Sbjct: 136 SMIASAIENNKVA--TEILPPVETLRSRQFEASKLREIRKNIDSGFYTQEEIEVIARSML 193
Query: 637 DEIPELSSDYLGNTIVQKLFEHASSVIKDIMLRKTSVYLTSMGVHKNGTWACQKMITNAD 696
D++ ELSSDYLGNT+VQK FE+ S IK+ ML + + YL ++G+HKNGTWA QK+I A
Sbjct: 194 DDVAELSSDYLGNTVVQKFFEYCSDPIKEAMLERIAPYLAAIGIHKNGTWAAQKIIDVAS 253
Query: 697 TPRQKMYVANGVYKYCTPLFNDQFGNYVIQCVLKFGFPWNNFIFENIVSNFWNIVQNRYG 756
T +Q + + Y L+ DQFGNYV QC L+F +P N F+FE + + I Q+R+G
Sbjct: 254 TEKQMDLIVKHLRPYTALLYFDQFGNYVAQCCLRFKYPKNTFLFEVMARHCCEIGQSRFG 313
Query: 757 ARAVRACLEAHDIITQEQLLLLSAMIVFFVKYLATNSNGALLVTWFLDTCTLPKRHSILA 816
ARA+RACLE ++ T EQ L+ A I+ LATNSNG LL+TW LD RH +LA
Sbjct: 314 ARAIRACLE-NENATFEQQALVVASIIINSHLLATNSNGMLLLTWLLDNSFFRNRHRLLA 372
Query: 817 EALLPNIFELGCHKLASLTILKILNYRGDEVAKRAILDTIFGPMDNEISSKPPQLLYQLL 876
L ++ HKLAS I K++N + + ++ +L +F S+ +L +L
Sbjct: 373 IHLATHLHTTCTHKLASTLIFKLINNKQEPESRNLLLKNLF-------FSEKDNVLTYIL 425
Query: 877 SDTNYGPSFVYKVLSIPMLEGDVR---HHVIEQVRYILTTESNITQHRRLLEEVGLNAIN 933
D GPSF++KV++ P + + H VI++V + + N + RL+EEVG+ + +
Sbjct: 426 QDQAVGPSFIHKVITYPSIGREFLAQFHLVIKRVLINIHAQPNAV-YCRLMEEVGMTSKS 484
Query: 934 NQPS 937
PS
Sbjct: 485 ISPS 488
>SPBP35G2.14 [R] KOG4574 RNA-binding protein (contains RRM and Pumilio-like
repeats)
Length = 1060
Score = 253 bits (645), Expect = 2e-66
Identities = 145/384 (37%), Positives = 226/384 (58%), Gaps = 18/384 (4%)
Query: 550 PSFKENITLLNDTINKFGINYDTSQYQHIIANAIEYNGTSDTTDFGP----LPEPLSTRE 605
PS +E L + + FG D S+ I+ N + TDF + + S+R
Sbjct: 687 PSLREVYDDLINVVQSFGFK-DLSKIYQIL------NAACELTDFAAQIPSISKAFSSRR 739
Query: 606 FDAPRLRELRKSIDSGQMSDLEIEQLVLAMLDEIPELSSDYLGNTIVQKLFEHASSVIKD 665
+AP+LR++RK ID+G + E+E + + LDE+ +LSSD+LGNT+VQKLF++ S +K+
Sbjct: 740 LNAPKLRQVRKRIDNGLCTQEEVEDIAINWLDEVSDLSSDHLGNTVVQKLFDYCSDPVKE 799
Query: 666 IMLRKTSVYLTSMGVHKNGTWACQKMITNADTPRQKMYVANGVYKYCTPLFNDQFGNYVI 725
+ML + + +L +G+HKNGTWA QK++ A T Q +A + Y LF DQFGNYV+
Sbjct: 800 MMLERIAPHLAQIGIHKNGTWAAQKIVDVASTEAQMRLIAKHLQPYIPLLFADQFGNYVV 859
Query: 726 QCVLKFGFPWNNFIFENIVSNFWNIVQNRYGARAVRACLEAHDIITQEQLLLLSAMIVFF 785
Q LKFG P N+F+FE I++ FW I Q+RYG+RAVRACLE+ D +T+EQ +L++A I +
Sbjct: 860 QTCLKFGAPMNDFVFEAILNQFWVIAQSRYGSRAVRACLESPD-VTEEQRVLVAAAITVY 918
Query: 786 VKYLATNSNGALLVTWFLDTCTLPKRHSILAEALLPNIFELGCHKLASLTILKILNY-RG 844
+LA N NG LL+T+ ++ P +L + +I + H+LA ++LKI++ +G
Sbjct: 919 SVHLAMNGNGTLLLTYLVENMNYPHIPILLTRRFVQDIVRVCTHRLAYNSLLKIISISQG 978
Query: 845 DEVAKRAILDTIFGPMDNEISSKPPQLLYQLLSDTNYGPSFVYKVLSIPMLEGDVRHHVI 904
D ++D I N+++ P L ++L + YGPSF+ K+L+ + R +
Sbjct: 979 DTACGDLVVDAIL-DTQNDLN---PNSLEKILFEQTYGPSFICKLLTHENISASHRQQLQ 1034
Query: 905 EQVRYIL-TTESNITQHRRLLEEV 927
VR +L T E + + L EV
Sbjct: 1035 SAVRNVLGTMEDRGSSELKKLAEV 1058
Score = 54.3 bits (129), Expect = 1e-06
Identities = 51/184 (27%), Positives = 81/184 (43%), Gaps = 14/184 (7%)
Query: 293 NSRPRSQSNASSIYTDAPTYDQMDTRSRASTFIIPPSMDPQLKATAASTNPIVQD----D 348
+SR RSQS ++ + T P S + S P+L+ + P+
Sbjct: 478 SSRRRSQSLSAMLKTSNPYMPSPSLLSGSLANSSEHSSSPRLRGSPIHNQPVSSSKSTAS 537
Query: 349 MDSRSINWVTTDPSVPSINHISNLLPTNT-----ISISNVFSLQQQQP-HLSNTVNLTS- 401
+++ + + P + +I+ S+ NT + + + +L Q +P H NL S
Sbjct: 538 LNTNNNGLRASTPEMANISTRSSSESNNTNSWPTVGDATIENLTQHEPTHALWVGNLPSG 597
Query: 402 ---TSLATLCLKFGTVISARTLRGVNMAIVEFASVEAAIKAKEALNGKEVSLVGAPSTVS 458
T++AT +GTV S R L + A + F SVE A E LNGK + P +S
Sbjct: 598 VSATTVATTFSAYGTVSSIRMLSHKHSAFLNFDSVETAKHVLEELNGKRIFFGSDPVCIS 657
Query: 459 FAKV 462
FAKV
Sbjct: 658 FAKV 661
>YGL014w [J] KOG2049 Translational repressor MPT5/PUF4 and related
RNA-binding proteins (Puf superfamily)
Length = 888
Score = 77.4 bits (189), Expect = 1e-13
Identities = 73/275 (26%), Positives = 121/275 (43%), Gaps = 18/275 (6%)
Query: 637 DEIPELSSDYLGNTIVQKLFEHASSVIKDIMLRKTSVYLTSMGVHKNGTWACQKMITNAD 696
D EL +D GN ++QKL E ++ + ++ + +S + + ++ +GT A QK+I
Sbjct: 602 DYTVELMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIK 661
Query: 697 TPRQKMYVANGVYKYCTPLFNDQFGNYVIQCVLKFGFPWN-NFIFENIVSNFWNIVQNRY 755
T + V + + Y L D GN+VIQ L+ P N FIF+ I + +I +R+
Sbjct: 662 TDEEAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRH 721
Query: 756 GARAVRACLEAHDIITQEQLLLLSAMIVFFVKYLATNSNGALLVTWFLDTCTLPKRHSI- 814
G ++ CL D T EQ L ++ V L + G +V + + ++
Sbjct: 722 GCCVLQRCL---DHGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYT 778
Query: 815 --LAEALLPNIFELGCHKLASLTILKILNYRGDEVAKRAILDTIFGPMDNEISSKPPQLL 872
+ L P EL HK S I KIL K AI+ PM EI + +
Sbjct: 779 HKIVHLLKPRAIELSIHKFGSNVIEKIL--------KTAIVSE---PMILEILNNGGETG 827
Query: 873 YQLLSDTNYGPSFVYKVLSIPMLEGDVRHHVIEQV 907
Q L + +YG + L I + D + + ++
Sbjct: 828 IQSLLNDSYGNYVLQTALDISHKQNDYLYKRLSEI 862
>YGL178w [J] KOG2049 Translational repressor MPT5/PUF4 and related
RNA-binding proteins (Puf superfamily)
Length = 859
Score = 70.1 bits (170), Expect = 2e-11
Identities = 86/346 (24%), Positives = 149/346 (42%), Gaps = 38/346 (10%)
Query: 516 GNTHAQSSSQAFVSPTNPSSSNSE--KEQCPFPLPPPSFKENITLLNDTINKFGINYDTS 573
G S V+P+N + S E + P + N + N+ +K G+ D S
Sbjct: 133 GPRRKSSHDFTVVAPSNSGVNTSSLIMETPSSSVTPAASLRNFSNSNNAASKCGV--DNS 190
Query: 574 QYQHIIANAIEYNGTSDTTDFGPLPE------PLSTREFDAPRL-RELRKSIDSGQMSDL 626
+ + + +S + LP L+T +F L ++L +S + DL
Sbjct: 191 SF------GLSSSTSSSMVEISALPLRDLDYIKLATDQFGCRFLQKKLETPSESNMVRDL 244
Query: 627 EIEQLVLAMLDEIPELSSDYLGNTIVQKLFEHASSVIKDIMLRKTSVYLTSMGVHKNGTW 686
EQ+ LD L D GN +VQKL ++ ++ K ++++ + + +++ GT
Sbjct: 245 MYEQIKPFFLD----LILDPFGNYLVQKLCDYLTAEQKTLLIQTIYPNVFQISINQYGTR 300
Query: 687 ACQKMITNADTPRQKMYVANGVYKYCT------PLFNDQFGNYVIQ-CVLKFGFPWNNFI 739
+ QK+I D Q + G + T L ND GN+VIQ C+ KF FI
Sbjct: 301 SLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQVVTLINDLNGNHVIQKCIFKFSPSKFGFI 360
Query: 740 FENIV--SNFWNIVQNRYGARAVRACLEAHDIITQEQLLLLSAMIVFFVKYLATNSNGAL 797
+ IV +N I +++G ++ L + T +Q+ +S IV F+ L + G
Sbjct: 361 IDAIVEQNNIITISTHKHGCCVLQKLL---SVCTLQQIFKISVKIVQFLPGLINDQFGNY 417
Query: 798 LVTWFLDTCTLPKRHSILAE---ALLPNIFELGCHKLASLTILKIL 840
++ + LD L +LAE L + +L C K +S + K +
Sbjct: 418 IIQFLLDIKELD--FYLLAELFNRLSNELCQLSCLKFSSNVVEKFI 461
>SPAC6G9.14 [J] KOG2049 Translational repressor MPT5/PUF4 and related
RNA-binding proteins (Puf superfamily)
Length = 681
Score = 65.9 bits (159), Expect = 3e-10
Identities = 72/289 (24%), Positives = 126/289 (42%), Gaps = 23/289 (7%)
Query: 642 LSSDYLGNTIVQKLFEHASSVIKDIMLRKTSVYLTSMGVHKNGTWACQKMITNADTPRQK 701
L D GN + QKLFEHAS + ++ + L + + +GT A QK+I +P Q
Sbjct: 387 LMVDAFGNYLCQKLFEHASEAQRSTFIQIIAPKLVPISFNMHGTRALQKIIDLVSSPDQI 446
Query: 702 MYVANGVYKYCTPLFNDQFGNYVIQ-CVLKFGFPWNNFIFENIVSNFWNIVQNRYGARAV 760
+ N + L D GN+VIQ C+ KF FIF+ I + ++ +R+G V
Sbjct: 447 SCIVNALRPNVVLLTKDLNGNHVIQKCLNKFSQEDCQFIFDAICEDPLDVSTHRHGCCVV 506
Query: 761 RACLEAHDIITQEQLLLLSAMIVFFVKYLATNSNGALLVTWFLDTCTLPKRHSILAEALL 820
+ C D + Q+ L IV L ++ G ++ + L+ P + L
Sbjct: 507 QRCF---DHASPAQIEQLVEHIVPHALTLVQDAFGNYVLQYVLE-LNNPNHTEAIISYFL 562
Query: 821 PNIFELGCHKLASLTILKILNYRGDEVAKRAILDTIFGPMDNEISSKPPQLLYQLLSDTN 880
+ L K +S + K + + A AI + + + +E + L +LL D
Sbjct: 563 YKVRALSTQKFSSNVMEKCIFF-----APAAIKEKLISELMDE------KHLPKLLRD-- 609
Query: 881 YGPSFVYKVLSIPMLEGDV--RHHVIEQVRYILTTESNITQHRRLLEEV 927
SF V+ + V R ++E+++ ++ + N RR+L ++
Sbjct: 610 ---SFANYVIQTALDNASVKQRAELVERIKPLIPSIKNTPCGRRILSKL 655
>At1g35730 [J] KOG2049 Translational repressor MPT5/PUF4 and related
RNA-binding proteins (Puf superfamily)
Length = 564
Score = 65.1 bits (157), Expect = 6e-10
Identities = 49/169 (28%), Positives = 83/169 (48%), Gaps = 6/169 (3%)
Query: 612 RELRKSIDSGQMSDLEIEQLVLAMLDEIPELSSDYLGNTIVQKLFEHASSVIKDI---ML 668
R L+K ++ G + ++ ++LA++D + ELS D GN IVQKLF+ + + + +L
Sbjct: 265 RVLQKLVEEGTFHEAKV--ILLAIIDHVVELSMDPFGNYIVQKLFDVSDEEQRTLIVSVL 322
Query: 669 RKTSVYLTSMGVHKNGTWACQKMITNADTPRQKMYVANGVYKYCTPLFNDQFGNYVIQ-C 727
L + ++ GT QKMI T +Q V +G+ L D GN+VIQ C
Sbjct: 323 TSNPRELIRICLNTYGTRVVQKMIETVKTKQQIALVKSGLKPGFLALVKDLNGNHVIQSC 382
Query: 728 VLKFGFPWNNFIFENIVSNFWNIVQNRYGARAVRACLEAHDIITQEQLL 776
+ G N F+ E I +R+G ++ C+ + +E+L+
Sbjct: 383 LQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQCCISNSVGLQRERLV 431
>YLL013c [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 879
Score = 64.7 bits (156), Expect = 8e-10
Identities = 67/314 (21%), Positives = 132/314 (41%), Gaps = 15/314 (4%)
Query: 627 EIEQLVLAMLDEIPELSSDYLGNTIVQKLFEHASSVIKDIMLRKTSVYLTSMGVHKNGTW 686
E E + + D+ ELS+D GN ++QK FE S + K+ ++ + + + +
Sbjct: 567 EKEVIFNEIRDDAIELSNDVFGNYVIQKFFEFGSKIQKNTLVDQFKGNMKQLSLQMYACR 626
Query: 687 ACQKMITNADTPRQKMYVANGVYKYCTPLFNDQFGNYVIQCVLK-FGFPWNNFIFENIVS 745
QK + D+ Q++ + + + DQ GN+VIQ ++ FI ++
Sbjct: 627 VIQKALEYIDS-NQRIELVLELSDSVLQMIKDQNGNHVIQKAIETIPIEKLPFILSSLTG 685
Query: 746 NFWNIVQNRYGARAVRACLEAHDIITQEQLLLLSAMIVFFVKYLATNSNGALLVTWFLDT 805
+ +++ + YG R ++ LE QE +L + F+ YL + G ++ + L
Sbjct: 686 HIYHLSTHSYGCRVIQRLLEFGSSEDQESIL---NELKDFIPYLIQDQYGNYVIQYVLQQ 742
Query: 806 CTLPKRHSI-----LAEALLPNIFELGCHKLASLTILKILNYRGDEVAKRAILDTIFGPM 860
+ + + E + N+ E HK AS + K + Y G + K I+ I
Sbjct: 743 DQFTNKEMVDIKQEIIETVANNVVEYSKHKFASNVVEKSILY-GSKNQKDLIISKILPRD 801
Query: 861 DNEISSKPPQLLYQLLSDTNYGPSFVYKVLSIPMLEGDVRHHVIEQVRYIL--TTESNIT 918
N + L+ + + K++++ EG+ + ++ +R L +SN
Sbjct: 802 KNHALNLEDDSPMILMIKDQFANYVIQKLVNVS--EGEGKKLIVIAIRAYLDKLNKSNSL 859
Query: 919 QHRRLLEEVGLNAI 932
+R L L A+
Sbjct: 860 GNRHLASVEKLAAL 873
>At1g35750 [J] KOG2049 Translational repressor MPT5/PUF4 and related
RNA-binding proteins (Puf superfamily)
Length = 528
Score = 62.8 bits (151), Expect = 3e-09
Identities = 84/313 (26%), Positives = 136/313 (42%), Gaps = 35/313 (11%)
Query: 612 RELRKSIDSGQMSDLEIEQLVLAMLDEIPELSSDYLGNTIVQKLF----EHASSVIKDIM 667
R L+K ++ G + D ++ + L ++D + ELS D LGN IVQKL E ++I ++
Sbjct: 229 RALQKLVEEGTVLDSKV--IFLEIIDHVVELSMDPLGNYIVQKLLVVSDEEQRTMIVSVL 286
Query: 668 LRKTSVYLTSMGVHKNGTWACQKMITNADTPRQKMYVANGVYKYCTPLFNDQFGNYVIQC 727
K L + ++ NGT QKMI T +Q V + + L ND G +V+Q
Sbjct: 287 TSKPRE-LIKICLNTNGTRVIQKMIKTVKTKQQIALVKSALEPGFLVLVNDSNGYHVLQS 345
Query: 728 VLKFGFPWNN-FIFENIVSNFWNIVQNRYGARAVRACLEAHDIITQEQLLLLSAMIVFFV 786
L+F P +N F+ E + ++YG ++ L + E+L+ A I
Sbjct: 346 CLEFLVPNDNKFVVEAATEYCAQLATHQYGCYVLQCSLINTVGLQHERLV---AEISRDS 402
Query: 787 KYLATNSNGALLVTWFLDTCTLPKRHSILAEALLP---NIFELGCHKLASLTILKILNYR 843
L+ + G +V +D + LLP + EL K +S I K L
Sbjct: 403 LRLSQDPFGNYVVQCLID------QQVSSVNLLLPFRTHCIELATQKFSSHVIEKCLRKY 456
Query: 844 GDEVAKRAILDTIFGPMDNEISSKPPQLLYQLLSDTNYGPSFVYKVLSIPMLEGDVRHHV 903
+ A+ + E+ S P QLL D Y + LS+ +G VR +
Sbjct: 457 PESRAE----------IVRELLSYPN--FEQLLQDP-YANYVIQTALSV--TKGAVRARL 501
Query: 904 IEQVRYILTTESN 916
+E+V+ +SN
Sbjct: 502 VEKVKRFGKLQSN 514
>At3g10360 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 1031
Score = 62.0 bits (149), Expect = 5e-09
Identities = 63/277 (22%), Positives = 121/277 (42%), Gaps = 23/277 (8%)
Query: 642 LSSDYLGNTIVQKLFEHASSVIKDIMLRKTSVYLTSMGVHKNGTWACQKMITNADTPRQK 701
L +D GN ++QK FEH ++ + + + + ++ ++ + G QK + + +Q
Sbjct: 708 LMTDVFGNYVIQKFFEHGTTKQRKELAEQVTGHVLALSLQMYGCRVIQKALEVVELEQQA 767
Query: 702 MYV--ANGVYKYCTPLFNDQFGNYVIQ-CVLKFGFPWNNFIFENIVSNFWNIVQNRYGAR 758
V +G C +DQ GN+VIQ C+ + W FI + + + YG R
Sbjct: 768 RMVKELDGSVMKCV---HDQNGNHVIQKCIERLPQDWIQFIISSFYGKVLALSTHPYGCR 824
Query: 759 AVRACLEAHDIITQEQLLLLSAMIVFFVKYLATNSNGALLVTWFLDTCTLPKRHSILAEA 818
++ LE D I +++++ I+ V LA + G ++ + P S +
Sbjct: 825 VIQRVLEHIDDIETQRIIM--EEIMDSVCTLAQDQYGNYVIQHIIQH-GKPHERSEIINK 881
Query: 819 LLPNIFELGCHKLASLTILKILNYRGDEVAKRAILDTIFGPMDNEISSKPPQLLYQLLSD 878
L I ++ K AS + K L + G E ++ +++ + G D + L ++ D
Sbjct: 882 LAGQIVKMSQQKFASNVVEKCLTFGGPE-ERQVLVNEMLGYTDEN------EPLQAMMKD 934
Query: 879 TNYGPSFVYKVL------SIPMLEGDVRHHVIEQVRY 909
+G V KVL S+ ++ ++ H+ RY
Sbjct: 935 P-FGNYVVQKVLETCDDQSLALILSRIKVHLNALKRY 970
>At4g08840 [J] KOG2049 Translational repressor MPT5/PUF4 and related
RNA-binding proteins (Puf superfamily)
Length = 524
Score = 60.5 bits (145), Expect = 1e-08
Identities = 59/206 (28%), Positives = 94/206 (44%), Gaps = 16/206 (7%)
Query: 612 RELRKSIDSGQMSDLEIEQLVLAMLDEIPELSSDYLGNTIVQKLFEHASSVIK-DIMLRK 670
R L+K +D G D+ I + +++ + EL +D GN ++QKL E + + I++R
Sbjct: 257 RLLQKFVDEGNFVDVMI--IFKEVINNVIELGTDPFGNYLIQKLIEVCNEEQRTQILIRL 314
Query: 671 TSV--YLTSMGVHKNGTWACQKMITNADTPRQKMYVANGVYKYCTPLFNDQFGNYVIQCV 728
TS L + ++ GT QK+I T Q V + + LF + GN+VI
Sbjct: 315 TSKPGLLVKISINNYGTRVVQKLIETVTTKEQISLVKSALVPGFLSLFRELNGNHVILNC 374
Query: 729 LKFGFPWNN-FIFENIVSNFWNIVQNRYGARAVRACL-----EAH----DIITQEQLLLL 778
LKF P +N FI E I R+G ++ C+ E H D I++ LLL
Sbjct: 375 LKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQRCVSYSVGEQHEKLVDEISRNSLLLA 434
Query: 779 SAMI-VFFVKYLATNSNGALLVTWFL 803
+ V+Y+ G + V + L
Sbjct: 435 QDPFGNYLVQYIIEKKVGGVNVLFEL 460
>At4g25880 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 849
Score = 58.9 bits (141), Expect = 4e-08
Identities = 64/252 (25%), Positives = 108/252 (42%), Gaps = 17/252 (6%)
Query: 641 ELSSDYLGNTIVQKLFEHASSVIKDIMLRKTSVYLTSMGVHKNGTWACQKMITNADTPRQ 700
+L +D GN ++QK FE+ +S + + + + + + G QK + + P Q
Sbjct: 563 KLMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKAL-DVIEPDQ 621
Query: 701 KMYVANGVYKYCTPLFNDQFGNYVIQ-CVLKFGFPWNNFIFENIVSNFWNIVQNRYGARA 759
++ +A + DQ GN+VIQ C+ F+ ++ + YG R
Sbjct: 622 RVRLARELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRV 681
Query: 760 VRACLE--AHDIITQEQLLLLSAMIVFFVKYLATNSNGALLVTWFLDTCTLPKRHSILAE 817
++ LE +HD Q ++ I+ V L+ + G + L+ T +R I
Sbjct: 682 IQRLLERCSHD----HQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERI-GR 736
Query: 818 ALLPNIFELGCHKLASLTILKILNYRGDEVAKRAILDTIFGPMDNEISSKPPQLLYQLLS 877
L +I +L HK AS I K L Y G V + I+ I GP ++ S L ++
Sbjct: 737 KLSGHIVQLSLHKFASNVIEKCLEY-GGRVERDLIIKEIAGPDESYNS------LLMMMK 789
Query: 878 DTNYGPSFVYKV 889
D YG V K+
Sbjct: 790 D-QYGNYVVQKI 800
>At2g29200 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 968
Score = 58.5 bits (140), Expect = 5e-08
Identities = 104/447 (23%), Positives = 179/447 (39%), Gaps = 49/447 (10%)
Query: 505 QQGNVSVPSFTG--NTHAQSSSQAFVS----PTNPSSSNSEKEQCPFPLPPPSFKE-NIT 557
Q+ VP +G N+H+ S F S P +P + + P P E N+
Sbjct: 525 QKSQYGVPYKSGSPNSHSYYGSPTFGSNMSYPGSPLAHHGMPNSLMSPYSPMRRDEVNMR 584
Query: 558 LLNDTINKFGINYDTSQYQHIIANAIEYNGTSDTTDFGPLPEPLSTREFDAPRLRELRKS 617
+ T N G H+ A+ E G+S +F + TR F+ +
Sbjct: 585 FPSATRNYSG---GLMGSWHMDASFDEGFGSSMLEEF----KSNKTRGFELSEIAGHVVE 637
Query: 618 IDSGQMSDLEIEQ-LVLAMLDE--------IPE---LSSDYLGNTIVQKLFEHASSVIKD 665
S Q I+Q L A DE +P+ L +D GN ++QK FEH +
Sbjct: 638 FSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALVLMTDVFGNYVIQKFFEHGLPPQRR 697
Query: 666 IMLRKTSVYLTSMGVHKNGTWACQKMITNADTPRQKMYVANGVYKYCTPLFNDQFGNYVI 725
+ K ++ + + G QK I D QK+ + + + DQ GN+V+
Sbjct: 698 ELAEKLFDHVLPLSLQMYGCRVIQKAIEVVDLD-QKIKMVKELDGHVMRCVRDQNGNHVV 756
Query: 726 QCVLKFGFPWNNFIFENIVSNFWNIV----QNRYGARAVRACLE-AHDIITQEQLLLLSA 780
Q ++ P N F I+S F+ V + YG R ++ LE HD TQ +++
Sbjct: 757 QKCIEC-VPEENIEF--IISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVM---E 810
Query: 781 MIVFFVKYLATNSNGALLVTWFLDTCTLPKRHSILAEALLPNIFELGCHKLASLTILKIL 840
I+ V LA + G +V L+ P +++ + L I ++ K AS + K L
Sbjct: 811 EILSTVSMLAQDQYGNYVVQHVLEH-GKPDERTVIIKELAGKIVQMSQQKFASNVVEKCL 869
Query: 841 NYRGDEVAKRAILDTIFGPMDNEISSKPPQLLYQLLSDTNYGPSFVYKVLSIPMLEGDVR 900
+ G E + +++ + G D ++P Q + + V KVL + R
Sbjct: 870 TFGGPE-ERELLVNEMLGTTD---ENEP----LQAMMKDQFANYVVQKVLE--TCDDQQR 919
Query: 901 HHVIEQVRYILTTESNITQHRRLLEEV 927
++ +++ LT T + ++ +
Sbjct: 920 ELILTRIKVHLTALKKYTYGKHVVARI 946
>SPAC4G8.03c [J] KOG2049 Translational repressor MPT5/PUF4 and related
RNA-binding proteins (Puf superfamily)
Length = 780
Score = 58.2 bits (139), Expect = 7e-08
Identities = 85/350 (24%), Positives = 137/350 (38%), Gaps = 38/350 (10%)
Query: 517 NTHAQSSSQAFVSPTNPSSSNSEKE---QCPF-------PLPPPSFKENITLLNDTINKF 566
N + SS PTN S+ N + + P+ P KE TL T+N F
Sbjct: 356 NDNHHSSLSMDNDPTNVSTKNRNNQTVGEHPYVDDNKKKKKGPAKPKEKATL-GKTVNSF 414
Query: 567 GINYDTSQYQHI-------------IANAIEYNGTSDTTDFGPLPE------PLSTREFD 607
++ TS Y + ++N ++ G + D +P LST D
Sbjct: 415 FGSHSTSNYSKVPLSAKLTGEKSDDLSNLLKNKGKKKSQD-NQIPHLVGFLGHLSTICKD 473
Query: 608 APRLRELRKSIDSGQMSDLEIEQLVLAMLDEIPELSSDYLGNTIVQKLFEHASSVIKDIM 667
R L+K +D + + + + +L D GN + QKLF +AS K M
Sbjct: 474 QYGCRYLQKLLDENPKVNASL--FFPEIRQSVVQLMIDPFGNYMCQKLFVYASREQKLSM 531
Query: 668 LRKTSVYLTSMGVHKNGTWACQKMITNADTPRQKMYVANGVYKYCTPLFNDQFGNYVIQ- 726
L + + + GT + Q +I + Q + + T L D G +V+Q
Sbjct: 532 LNGIGEGIVDICSNLYGTRSMQNIIDKLTSNEQISLLLKIIIPSLTTLACDNNGTHVLQK 591
Query: 727 CVLKFGFPWNNFIFENIVSNFWNIVQNRYGARAVRACLEAHDIITQEQLLLLSAMIVFFV 786
C+ KF +F ++ N + NR+G ++ CL+ + QE+L+ I+
Sbjct: 592 CIAKFPPEKLEPLFLSMEENLITLATNRHGCCILQRCLDRTNGDIQERLV---NSIIKSC 648
Query: 787 KYLATNSNGALLVTWFLDTCTLPKRHSILAEALLPNIFELGCHKLASLTI 836
L N+ G LV L+ P I+ E NI +L K +S I
Sbjct: 649 LLLVQNAYGNYLVQHVLELNIQPYTERII-EKFFGNICKLSLQKFSSNAI 697
Score = 51.2 bits (121), Expect = 9e-06
Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 3/166 (1%)
Query: 612 RELRKSIDSGQMSDLEIEQLVLAMLDEIPELSSDYLGNTIVQKLFEHASSVIKDIMLRKT 671
R ++ ID S+ +I L+ ++ + L+ D G ++QK + +
Sbjct: 550 RSMQNIIDK-LTSNEQISLLLKIIIPSLTTLACDNNGTHVLQKCIAKFPPEKLEPLFLSM 608
Query: 672 SVYLTSMGVHKNGTWACQKMITNADTPRQKMYVANGVYKYCTPLFNDQFGNYVIQCVLKF 731
L ++ +++G Q+ + + Q+ V N + K C L + +GNY++Q VL+
Sbjct: 609 EENLITLATNRHGCCILQRCLDRTNGDIQERLV-NSIIKSCLLLVQNAYGNYLVQHVLEL 667
Query: 732 GF-PWNNFIFENIVSNFWNIVQNRYGARAVRACLEAHDIITQEQLL 776
P+ I E N + ++ + A+ C+ T+EQ+L
Sbjct: 668 NIQPYTERIIEKFFGNICKLSLQKFSSNAIEQCIRTASPSTREQML 713
>ECU11g1730 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 530
Score = 57.8 bits (138), Expect = 9e-08
Identities = 50/223 (22%), Positives = 102/223 (45%), Gaps = 12/223 (5%)
Query: 612 RELRKSIDSGQMSDLEIEQLVLAMLDEIPELSSDYLGNTIVQKLFEHASSVIKDIMLRKT 671
R +++ +DS +S EI ++D PELS++ GN ++QK+ + + ++ K
Sbjct: 233 RCIQRKMDS--ISRAEISWFFNNIVDAAPELSANLFGNYVIQKIIPLLTEEERARLIAKL 290
Query: 672 SVYLTSMGVHKNGTWACQKMITNADTPRQKMYVANGVYKYCTPLFNDQFGNYVIQ-CVLK 730
+ + + VH G QK++ D ++ V L DQ GN+VIQ C+ K
Sbjct: 291 AKQINLLSVHPYGCRVIQKLV---DVSSDVDFILEEVRDNLLELIEDQNGNHVIQKCIEK 347
Query: 731 FGFPWNNFIFENIVSNFWNIVQNRYGARAVRACLEAHDIITQEQLLLLSAMIVFFVKYLA 790
N I + N + ++YG R ++ LE ++++ + +++ +K L
Sbjct: 348 --CKDRNIILQQFSENSLFLATHKYGCRVIQRMLE---FCREDEIKNIVEVLISNIKTLV 402
Query: 791 TNSNGALLVTWFLDTCTLPKRHSILAEALLPNIFELGCHKLAS 833
+ G ++ L +++ ++ E ++ +EL K +S
Sbjct: 403 DDQYGNYVIQHILAVGKEDEKNLVI-EKIIEKSYELSRCKFSS 444
>CE05044 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 707
Score = 57.8 bits (138), Expect = 9e-08
Identities = 89/420 (21%), Positives = 162/420 (38%), Gaps = 59/420 (14%)
Query: 487 NPQSLLQEQLFSGAVQFQQQGNVSV-----PSFTGNTHAQS--SSQAFVSPTNPSSSNSE 539
+PQ Q+QL A Q QQQ N P+ GN + S ++F P + N
Sbjct: 256 HPQGQAQQQLQQLAQQHQQQQNSQQFFGQGPNGMGNGGVMNDWSQRSFGMPQQQAQQNGL 315
Query: 540 KEQCPFPLPPPSFKENITLLNDTINKFGINYDTSQYQHIIANAIEYNGTSDTTDFGPLPE 599
PP+F +N + G T Q I N IE+ + F
Sbjct: 316 ---------PPNFSQNPPRRRGPEDPNGQTPKT--LQDIKNNVIEFAKDQHGSRF----- 359
Query: 600 PLSTREFDAPRLRELRKSIDSGQMSDLEIEQLVLAMLDEIPELSSDYLGNTIVQKLFEHA 659
+++ ++ + D + +L+ EL +D GN ++QK FE
Sbjct: 360 --------------IQQKLERASLRDKAA--IFTPVLENAEELMTDVFGNYVIQKFFEFG 403
Query: 660 SSVIKDIMLRKTSVYLTSMGVHKNGTWACQKMITNADTPRQKMYVA--NGVYKYCTPLFN 717
++ ++ ++ + + + G QK + + Q + G C
Sbjct: 404 NNEQRNQLVGTIRGNVMKLALQMYGCRVIQKALEYVEEKYQHEILGEMEGQVLKCV---K 460
Query: 718 DQFGNYVIQCVLKFGFPWN-NFIFE----NIVSNFWNIVQNRYGARAVRACLEAHDIITQ 772
DQ GN+VIQ V++ P FI + N N + + + YG R ++ LE +
Sbjct: 461 DQNGNHVIQKVIERVEPERLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLE---YCNE 517
Query: 773 EQLLLLSAMIVFFVKYLATNSNGALLVTWFLDTCTLPKRHSILAEALLPNIFELGCHKLA 832
EQ + + +K L + G ++ ++ + + I+ + + ++ + HK A
Sbjct: 518 EQKQPVLDALQIHLKQLVLDQYGNYVIQHVIEHGSPSDKEQIVQDVISDDLLKFAQHKFA 577
Query: 833 SLTILKILNYRGDEVAKRAILDTIFGPMDNEISSKPPQLLYQLLSDTNYGPSFVYKVLSI 892
S I K L + G + I+D + G ++ P L Q++ D + V K+L +
Sbjct: 578 SNVIEKCLTF-GGHAERNLIIDKVCGDPND-----PSPPLLQMMKDP-FANYVVQKMLDV 630
>Hs13491168 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 1064
Score = 57.0 bits (136), Expect = 2e-07
Identities = 68/298 (22%), Positives = 125/298 (41%), Gaps = 17/298 (5%)
Query: 641 ELSSDYLGNTIVQKLFEHASSVIKDIMLRKTSVYLTSMGVHKNGTWACQKMITNADTPRQ 700
+L +D GN ++QK FE S K + + ++ + + G QK + + + +Q
Sbjct: 769 QLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQ 828
Query: 701 KMYVANGVYKYCTPLFNDQFGNYVIQCVLKFGFPWN-NFIFENIVSNFWNIVQNRYGARA 759
V + + DQ GN+V+Q ++ P + FI + + + + YG R
Sbjct: 829 SEMVKE-LDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRV 887
Query: 760 VRACLEAHDIITQEQLLLLSAMIVFFVKYLATNSNGALLVTWFLDTCTLPKRHSILAEAL 819
++ LE T EQ L + + + L + G ++ L+ P+ S + +
Sbjct: 888 IQRILEH---CTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH-GRPEDKSKIVSEI 943
Query: 820 LPNIFELGCHKLASLTILKILNYRGDEVAKRAIL-DTIFGPMDNEISSKPPQLLYQLLSD 878
+ L HK AS + K + + A+RA+L D + D P LY ++ D
Sbjct: 944 RGKVLALSQHKFASNVVEKCVTHASR--AERALLIDEVCCQNDG-----PHSALYTMMKD 996
Query: 879 TNYGPSFVYKVLSIPMLEGDVRHHVIEQVRYILTTESNITQHRRLLEEVGLNAINNQP 936
Y V K+ I M E R ++ ++R +TT T + +L ++ + N P
Sbjct: 997 -QYANYVVQKM--IDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYYLKNSP 1051
>SPAC1687.22c [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 429
Score = 56.2 bits (134), Expect = 3e-07
Identities = 53/217 (24%), Positives = 98/217 (44%), Gaps = 8/217 (3%)
Query: 641 ELSSDYLGNTIVQKLFEHASSVIKDIMLRKTSVYLTSMGVHKNGTWACQKMITNADTPRQ 700
+L D GN +VQK FE + K I+L + ++ S+ + G QK I +P
Sbjct: 137 QLMMDIFGNYVVQKYFEFGNEKQKQILLSQIKGHVFSLSLQMYGCRVVQKAIEYI-SPEH 195
Query: 701 KMYVANGVYKYCTPLFNDQFGNYVIQCVLK-FGFPWNNFIFENIVSNFWNIVQNRYGARA 759
++ + + + DQ GN+VIQ ++ FI + + + YG R
Sbjct: 196 QVQLIQELDGHVLDCVCDQNGNHVIQKAIECIDTGHLQFILRALRPQIHVLSAHPYGCRV 255
Query: 760 VRACLEAHDIITQEQLLLLSAMIVFFVKYLATNSNGALLVTWFLDTCTLPKRHSILAEAL 819
++ +E E+ L++ ++ +K L + G +V L T + + I + +
Sbjct: 256 IQRAIEH---CHSERKLIIEELLPHILK-LTQDQYGNYVVQHILRTGSESDKKYIF-DLM 310
Query: 820 LPNIFELGCHKLASLTILKILNYRGDEVAKRAILDTI 856
+ ++ L CHK AS + + ++Y D V +R IL+ I
Sbjct: 311 IDHLLFLSCHKFASNVVERCISYISD-VDRRRILNKI 346
>At3g20250 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 955
Score = 55.5 bits (132), Expect = 5e-07
Identities = 53/241 (21%), Positives = 100/241 (40%), Gaps = 6/241 (2%)
Query: 624 SDLEIEQLVLAMLDEIPELSSDYLGNTIVQKLFEHASSVIKDIMLRKTSVYLTSMGVHKN 683
SD E + +L + +L +D GN ++QK EH + ++ ++++ + + S+ +
Sbjct: 655 SDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPAQREELVKQLAGQMVSLSLQMY 714
Query: 684 GTWACQKMITNADTPRQKMYVANGVYKYCTPLFNDQFGNYVIQ-CVLKFGFPWNNFIFEN 742
G QK + D QK + + DQ GN+VIQ C+ F+
Sbjct: 715 GCRVIQKALEVIDVD-QKTELIRELDGNVLKCVRDQNGNHVIQKCIESMPAGRIGFVIAA 773
Query: 743 IVSNFWNIVQNRYGARAVRACLEAHDIITQEQLLLLSAMIVFFVKYLATNSNGALLVTWF 802
+ + YG R ++ LE E+ + I+ LA + G +
Sbjct: 774 FRGQVATLSTHPYGCRVIQRILE--HCSDDEETHCIIDEILESAFALAHDQYGNYVTQHV 831
Query: 803 LDTCTLPKRHSILAEALLPNIFELGCHKLASLTILKILNYRGDEVAKRAILDTIFGPMDN 862
L+ +R I+ E L N+ ++ HK AS + K L + D + +++ I G +
Sbjct: 832 LERGKPDERRQII-EKLTGNVVQMSQHKYASNVVEKCLEH-ADSTEREFLIEEIMGKSEE 889
Query: 863 E 863
+
Sbjct: 890 D 890
>At2g29190 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 972
Score = 55.1 bits (131), Expect = 6e-07
Identities = 54/223 (24%), Positives = 96/223 (42%), Gaps = 10/223 (4%)
Query: 642 LSSDYLGNTIVQKLFEHASSVIKDIMLRKTSVYLTSMGVHKNGTWACQKMITNADTPRQK 701
L +D GN ++QK FEH + + K + + + G QK I D QK
Sbjct: 678 LMTDVFGNYVIQKFFEHGLPPQRRELADKLFDNVLPLSLQMYGCRVIQKAIEVVDLD-QK 736
Query: 702 MYVANGVYKYCTPLFNDQFGNYVIQCVLKFGFPWNN--FIFENIVSNFWNIVQNRYGARA 759
+ + + + DQ GN+V+Q ++ P N FI N + + YG R
Sbjct: 737 IKMVKELDGHVMRCVRDQNGNHVVQKCIEC-VPEENIEFIISTFFGNVVTLSTHPYGCRV 795
Query: 760 VRACLE-AHDIITQEQLLLLSAMIVFFVKYLATNSNGALLVTWFLDTCTLPKRHSILAEA 818
++ LE HD TQ +++ I+ + LA + G ++ L+ P +++ +
Sbjct: 796 IQRVLEHCHDPDTQSKVM---DEIMSTISMLAQDQYGNYVIQHVLEH-GKPDERTVIIKE 851
Query: 819 LLPNIFELGCHKLASLTILKILNYRGDEVAKRAILDTIFGPMD 861
L I ++ K AS + K L + G E + +++ + G D
Sbjct: 852 LAGKIVQMSQQKFASNVVEKCLTFGGPE-EREFLVNEMLGTTD 893
>At5g56510 [J] KOG2049 Translational repressor MPT5/PUF4 and related
RNA-binding proteins (Puf superfamily)
Length = 604
Score = 53.9 bits (128), Expect = 1e-06
Identities = 61/250 (24%), Positives = 104/250 (41%), Gaps = 21/250 (8%)
Query: 627 EIEQLVLAMLDEIPELSSDYLGNTIVQKLFEHASS----VIKDIMLRKTSVYLTSMGVHK 682
+IE + ++D I EL D GN +VQKL E + I + RK + L +
Sbjct: 306 DIEMIFNEIIDYISELMMDPFGNYLVQKLLEVCNEDQRMQIVHSITRKPGL-LIKISCDM 364
Query: 683 NGTWACQKMITNADTPRQKMYVANGVYKYCTPLFNDQFGNYVIQCVLKFGFPW-NNFIFE 741
+GT A QK++ A + + + + L + GN+V+Q L++ P+ F+FE
Sbjct: 365 HGTRAVQKIVETAKREEEISIIISALKHGIVHLIKNVNGNHVVQRCLQYLLPYCGKFLFE 424
Query: 742 NIVSNFWNIVQNRYGARAVRACL-------EAHDI--ITQEQLLLLSAMIVFFVKYLATN 792
+++ + +R+G ++ CL + H + I LLL + N
Sbjct: 425 AAITHCVELATDRHGCCVLQKCLGYSEGEQKQHLVSEIASNALLLSQDPFGIDANFFCRN 484
Query: 793 SNGALLVTWFLDTCTLPKRHSILAEALLPNIFELGCHKLASLTILKILNYRGDEVAKRAI 852
V ++ L + E L N EL K +S + K L D+ R I
Sbjct: 485 -----YVLQYVFELQLQWATFEILEQLEGNYTELSMQKCSSNVVEKCLKLADDKHRARII 539
Query: 853 LDTI-FGPMD 861
+ I +G +D
Sbjct: 540 RELINYGRLD 549
>Hs13491166 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 1186
Score = 51.6 bits (122), Expect = 7e-06
Identities = 61/288 (21%), Positives = 118/288 (40%), Gaps = 15/288 (5%)
Query: 641 ELSSDYLGNTIVQKLFEHASSVIKDIMLRKTSVYLTSMGVHKNGTWACQKMITNADTPRQ 700
+L D GN ++QK FE S K + + ++ S+ + G QK + + +Q
Sbjct: 891 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 950
Query: 701 KMYVANGVYKYCTPLFNDQFGNYVIQCVLKFGFPWN-NFIFENIVSNFWNIVQNRYGARA 759
V + + DQ GN+V+Q ++ P + FI + + + + YG R
Sbjct: 951 NEMVRE-LDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 1009
Query: 760 VRACLEAHDIITQEQLLLLSAMIVFFVKYLATNSNGALLVTWFLDTCTLPKRHSILAEAL 819
++ LE +Q L + + + L + G ++ L+ + I+AE +
Sbjct: 1010 IQRILEH---CLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAE-I 1065
Query: 820 LPNIFELGCHKLASLTILKILNYRGDEVAKRAILDTIFGPMDNEISSKPPQLLYQLLSDT 879
N+ L HK AS + K + + + ++D + D P LY ++ D
Sbjct: 1066 RGNVLVLSQHKFASNVVEKCVTH-ASRTERAVLIDEVCTMNDG-----PHSALYTMMKD- 1118
Query: 880 NYGPSFVYKVLSIPMLEGDVRHHVIEQVRYILTTESNITQHRRLLEEV 927
Y V K++ + E R V+ ++R + T T + +L ++
Sbjct: 1119 QYANYVVQKMIDV--AEPGQRKIVMHKIRPHIATLRKYTYGKHILAKL 1164
>At2g29140 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 964
Score = 51.6 bits (122), Expect = 7e-06
Identities = 56/225 (24%), Positives = 98/225 (42%), Gaps = 14/225 (6%)
Query: 642 LSSDYLGNTIVQKLFEHASSVIKDIMLRKTSVYLTSMGVHKNGTWACQKMITNADTPRQK 701
L +D GN ++QK FEH + + K + + + G QK I D QK
Sbjct: 670 LMTDVFGNYVIQKFFEHGLPPQRRELGEKLIDNVLPLSLQMYGCRVIQKAIEVVDLD-QK 728
Query: 702 MYVANGVYKYCTPLFNDQFGNYVIQCVLKFGFPWNNFIFENIVSNFWNIV----QNRYGA 757
+ + + + DQ GN+V+Q ++ P N F I+S F+ V + YG
Sbjct: 729 IQMVKELDGHVMRCVRDQNGNHVVQKCIEC-VPEENIEF--IISTFFGHVVTLSTHPYGC 785
Query: 758 RAVRACLE-AHDIITQEQLLLLSAMIVFFVKYLATNSNGALLVTWFLDTCTLPKRHSILA 816
R ++ LE H+ TQ +++ I+ V L + G +V L+ P +++
Sbjct: 786 RVIQRVLEHCHNPDTQSKVM---EEILSTVSMLTQDQYGNYVVQHVLEH-GKPDERTVII 841
Query: 817 EALLPNIFELGCHKLASLTILKILNYRGDEVAKRAILDTIFGPMD 861
+ L I ++ K AS + K L + G E + +++ + G D
Sbjct: 842 KELAGKIVQMSQQKFASNVVEKCLTFGGPE-ERELLVNEMLGTTD 885
Score = 51.6 bits (122), Expect = 7e-06
Identities = 42/183 (22%), Positives = 81/183 (43%), Gaps = 13/183 (7%)
Query: 600 PLSTREFDAPRLRELRKSIDSGQMSDLEIE-QLVLAMLDEIPELSSDYLGNTIVQKLFEH 658
PLS + + R ++K+I+ + DL+ + Q+V + + D GN +VQK E
Sbjct: 705 PLSLQMYGC---RVIQKAIE---VVDLDQKIQMVKELDGHVMRCVRDQNGNHVVQKCIEC 758
Query: 659 ASSVIKDIMLRKTSVYLTSMGVHKNGTWACQKMITNADTPRQKMYVANGVYKYCTPLFND 718
+ ++ ++ ++ H G Q+++ + P + V + + L D
Sbjct: 759 VPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHNPDTQSKVMEEILSTVSMLTQD 818
Query: 719 QFGNYVIQCVLKFGFP-WNNFIFENIVSNFWNIVQNRYGARAVRACL-----EAHDIITQ 772
Q+GNYV+Q VL+ G P I + + + Q ++ + V CL E +++
Sbjct: 819 QYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVN 878
Query: 773 EQL 775
E L
Sbjct: 879 EML 881
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.314 0.130 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,731,309
Number of Sequences: 60738
Number of extensions: 2578571
Number of successful extensions: 6905
Number of sequences better than 1.0e-05: 24
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 6763
Number of HSP's gapped (non-prelim): 85
length of query: 1094
length of database: 30,389,216
effective HSP length: 117
effective length of query: 977
effective length of database: 23,282,870
effective search space: 22747363990
effective search space used: 22747363990
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)