ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV1575 good S KOG3224 Function unknown Uncharacterized conserved protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV1575 556638 555430 -403
(403 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YPR040w [S] KOG3224 Uncharacterized conserved protein 276 5e-74
SPCC4B3.16 [S] KOG3224 Uncharacterized conserved protein 106 7e-23
7289288 [S] KOG3224 Uncharacterized conserved protein 96 9e-20
CE29650 [S] KOG3224 Uncharacterized conserved protein 91 2e-18
At4g34270 [S] KOG3224 Uncharacterized conserved protein 86 1e-16
>YPR040w [S] KOG3224 Uncharacterized conserved protein
Length = 356
Score = 276 bits (705), Expect = 5e-74
Identities = 142/282 (50%), Positives = 194/282 (68%), Gaps = 12/282 (4%)
Query: 123 VIVPSPVATIPAKDDPSVSVGDWTITTTKRPILSSDEIDDW-TEKLK-FPIPEMIFGHSS 180
VI+PSP AT+P +D+PS+S+ DWTI++ K+PIL+S E+D W EKLK +PEMIFG++
Sbjct: 75 VIIPSPRATLPLEDNPSISINDWTISSRKKPILNSQELDIWENEKLKGLTLPEMIFGNNY 134
Query: 181 VELKNTKTHWCIRFNPFHALSQVKLGDSGLRVSYSEKWINSKLKNSQVTNTE-------- 232
+ ++N+K HW I FN AL +V+L DSG+RV+YS WINSK + + +
Sbjct: 135 IRIENSKQHWSIEFNALDALKEVQLQDSGIRVAYSNDWINSKKRQNSTNGAQRFTNDVND 194
Query: 233 EGLQFGKHWDWSYTTLYNGTVSEDSEYKFVVDNQYQLPIEKLTRRDPILFYDDFILFEDE 292
+ L +DW+YTT Y GT S E KF +DN +LP++KL D ILFYDD ILFEDE
Sbjct: 195 DSLNIIHKYDWTYTTRYKGTESSP-ESKFRLDNDQKLPLDKLAVHDKILFYDDMILFEDE 253
Query: 293 LADNGISMLSIKLRVMAEXXXXXXXXXXXVDEVLFKIIDTRIYVEFNEDLVVREWKYMED 352
LADNGIS+L++K+RVM E VD+VL ++ DTRIYVEF+E++V+RE K E
Sbjct: 254 LADNGISILNVKIRVMNERLLLLSRFFLRVDDVLVRVYDTRIYVEFDENVVIRESKEFEG 313
Query: 353 DYKTVLNKCRLN-SNDPKKSLRDSNWVASVLPLKERVCEVLR 393
Y+ VL K RL+ S+DPK +LRDSNWVA P+ +R CE+++
Sbjct: 314 KYQDVLAKHRLSQSHDPKAALRDSNWVAQNTPMIKRQCEIIQ 355
>SPCC4B3.16 [S] KOG3224 Uncharacterized conserved protein
Length = 252
Score = 106 bits (264), Expect = 7e-23
Identities = 71/241 (29%), Positives = 124/241 (50%), Gaps = 15/241 (6%)
Query: 145 WTITTTKRPILSSDEIDDWTEKLKFPIPEMIFGHS--SVELKNTKTHWCIRFNPFHALSQ 202
WTI + IL S E+++ L FP PEM FG++ S+E KN + F AL
Sbjct: 12 WTIKVQRGSILKSHEMENLQSTLGFPPPEMTFGNNYISIEYKNQPV---VGFFTEDALKM 68
Query: 203 VKLG-DSGLRVSYSEKWINSKLKNSQVTNTEEGLQFGKHWDWSYTTLYNGTVSEDSEYKF 261
V + ++VS+++ W S++K E +DW+Y T Y GT+ + KF
Sbjct: 69 VGTKPEDVMQVSFAKDWAKSRIKPG------EEYPVIYPFDWTYYTDYQGTIQRPNA-KF 121
Query: 262 VVDNQYQLPIEKLTRRDPILFYDDFILFEDELADNGISMLSIKLRVMAEXXXXXXXXXXX 321
+ +Q +P++K+ L++++ ILFEDELADNG SM ++ RV+
Sbjct: 122 IEIDQV-IPVQKILNAGQNLWFNEIILFEDELADNGKSMFDVRARVVQGHLILLARLVVR 180
Query: 322 VDEVLFKIIDTRIYVEFNEDLVVREWKYMEDDYKTVLNKCRLNSNDPKKSLRDSNWVASV 381
+D+V ++ +TRIY++ D ++++ + + Y ++ + + D L D+NW++
Sbjct: 181 LDKVNVRLNETRIYIDLLNDFLLKDCRKKQATYDKIIKQIPV-GGDKAALLDDNNWLSER 239
Query: 382 L 382
L
Sbjct: 240 L 240
>7289288 [S] KOG3224 Uncharacterized conserved protein
Length = 270
Score = 95.9 bits (237), Expect = 9e-20
Identities = 69/234 (29%), Positives = 115/234 (48%), Gaps = 29/234 (12%)
Query: 136 DDPSVSVGDWTITTTKRPILSSD-----------------EIDDWTEKLKFP-IPEMIFG 177
D + DW I K IL S ++ + L+ P +P+M+F
Sbjct: 12 DSEFIQFHDWAIKYEKSHILKSSCQLGTAKCCPKDSADRCDLCHYQHSLQLPHLPDMVFH 71
Query: 178 HSSVELKNTKTHWCIRFNPFHALSQVKLGDSGLRVSYSEKWINSKLKNSQVTNTEEGLQF 237
+ + L++ K + F P AL+ V G L V+ +++W + +N Q +
Sbjct: 72 KNRLVLQH-KDGATLEFCPMDALALVDNGKQPLEVACAQEW--RETRNEQTMEEKF---- 124
Query: 238 GKHWDWSYTTLYNGTVSEDSEYKFVVDNQYQLPIEKLTRRDPILFYDDFILFEDELADNG 297
K +DW++T+ Y GT++E + + NQ L KL +R+ I+FY D LFEDEL D+G
Sbjct: 125 -KPFDWTFTSTYQGTMNE--KVRSETTNQ-TLNKFKLMQRENIIFYHDLTLFEDELHDHG 180
Query: 298 ISMLSIKLRVMAEXXXXXXXXXXXVDEVLFKIIDTRIYVEFNEDLVVREWKYME 351
IS++S+++RVM VD VL ++ DTR + E D +++E+ + E
Sbjct: 181 ISVMSVRIRVMPSGFFILLRHFLRVDHVLIRMHDTRFHHEIENDFILKEYIHRE 234
>CE29650 [S] KOG3224 Uncharacterized conserved protein
Length = 429
Score = 91.3 bits (225), Expect = 2e-18
Identities = 64/186 (34%), Positives = 94/186 (50%), Gaps = 15/186 (8%)
Query: 172 PEMIFGHSSVELKNTKTHWCIRFNPFHALSQV---KLGDSGLRVSYSEKWINSKLKNSQV 228
PEM+F +S+ ++ + I FN AL V +L D ++V S W +++ Q
Sbjct: 217 PEMVFARNSLTIQFGRLG-SIEFNALDALKMVCADRLPD--VKVGASTVWQSARQDRIQQ 273
Query: 229 TNTEEGLQFGKHWDWSYTTLYNGTVSEDSEYKFVVDNQYQLPIEKLTRRDPILFYDDFIL 288
+ + K +DW+YTT Y GTV+ V ++ +E+L RRD ILF L
Sbjct: 274 ISEHQ-----KPFDWTYTTHYKGTVTGCQ----VTPTTERIDMERLKRRDEILFSSSITL 324
Query: 289 FEDELADNGISMLSIKLRVMAEXXXXXXXXXXXVDEVLFKIIDTRIYVEFNEDLVVREWK 348
FEDELAD+GI+ L ++RVM VD VL ++ DTRI + V+REW+
Sbjct: 325 FEDELADHGIAQLLARVRVMRGYFFVLLRFYMRVDNVLLRVCDTRIVGNEFDGHVIREWQ 384
Query: 349 YMEDDY 354
E Y
Sbjct: 385 LREAKY 390
>At4g34270 [S] KOG3224 Uncharacterized conserved protein
Length = 231
Score = 85.5 bits (210), Expect = 1e-16
Identities = 63/205 (30%), Positives = 106/205 (50%), Gaps = 27/205 (13%)
Query: 174 MIFGHSSVELKNTKTHWCIRFNPFHALSQVKL-GDSGLRVSYSEKWINSKLKNSQVTNTE 232
M+FG +++ LK+ ++ I FN F AL+ K G + V + +W + QV
Sbjct: 1 MVFGENALVLKHLGSNTKIHFNAFDALAGWKQEGLPPVEVPAAAQWKFRSKPSQQVI--- 57
Query: 233 EGLQFGKHWDWSYTTLYNGT--VSEDSEYKFVVDN------------QYQLPIEKLTRRD 278
+D+++TT Y G+ V +D E N + Q+ + L+ ++
Sbjct: 58 ------LDYDYTFTTPYCGSEVVEKDKETVEAKANPKGEATLQWENCEDQIDLAALSLKE 111
Query: 279 PILFYDDFILFEDELADNGISMLSIKLRVMAEXXXXXXXXXXXVDEVLFKIIDTRIYVEF 338
PILFYD+ +L+EDELADNG+S+L++K+RVM VD VL ++ +TR++ F
Sbjct: 112 PILFYDEVVLYEDELADNGVSLLTVKVRVMPSSWFLLLRFWLRVDGVLMRLRETRMHYRF 171
Query: 339 NED---LVVREWKYMEDDYKTVLNK 360
ED V+RE + E ++++ K
Sbjct: 172 GEDEAPTVLRENCWREATFQSLSAK 196
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.131 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,501,162
Number of Sequences: 60738
Number of extensions: 854341
Number of successful extensions: 2084
Number of sequences better than 1.0e-05: 5
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2069
Number of HSP's gapped (non-prelim): 6
length of query: 403
length of database: 30,389,216
effective HSP length: 109
effective length of query: 294
effective length of database: 23,768,774
effective search space: 6988019556
effective search space used: 6988019556
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)