ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV1584 good S KOG4267 Function unknown Predicted membrane protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV1584 558694 559008 105
(105 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YJR085c [S] KOG4267 Predicted membrane protein 126 6e-30
SPAP14E8.05c [S] KOG4267 Predicted membrane protein 52 2e-07
Hs7662639 [S] KOG4267 Predicted membrane protein 50 7e-07
Hs7705501 [S] KOG4267 Predicted membrane protein 49 9e-07
7291635 [S] KOG4267 Predicted membrane protein 47 3e-06
>YJR085c [S] KOG4267 Predicted membrane protein
Length = 105
Score = 126 bits (316), Expect = 6e-30
Identities = 58/105 (55%), Positives = 72/105 (68%)
Query: 1 MDHPSFALAALATIGGTMGYIRKGSVPSLVAGLTFGGIYGYAGYLLKNNADNGLEIALGA 60
M+HP++ L+ L T GG MGY RKGS+PSLV+GL FG +YG AGYLL N D GLE+ALGA
Sbjct: 1 MEHPAYTLSLLTTAGGLMGYYRKGSIPSLVSGLVFGSVYGIAGYLLHMNRDGGLEMALGA 60
Query: 61 SSVMLVTGIARGIPGRFKKXXXXXXXXXXXXXXWYYYKKYKEFYP 105
S+++L G+ RG+P RF K +YYY KYKEFYP
Sbjct: 61 STLLLGAGVIRGMPSRFTKPVPVVLTALGGLGSYYYYNKYKEFYP 105
>SPAP14E8.05c [S] KOG4267 Predicted membrane protein
Length = 101
Score = 51.6 bits (122), Expect = 2e-07
Identities = 29/97 (29%), Positives = 45/97 (45%), Gaps = 2/97 (2%)
Query: 2 DHPSFALAALATIGGTMGYIRKGSVPSLVAGLTFGGIYGYAGYLLKNNADNGLEIALGAS 61
D + L+ L T+GG +GY+RK S SL+AG G + +A L++ + G+ A S
Sbjct: 4 DQNALVLSFLLTVGGLIGYLRKKSKVSLIAGTALGANFAWASKLMERGSSQGINYAFYGS 63
Query: 62 SVMLVTGIARGIPGRFKKXXXXXXXXXXXXXXWYYYK 98
V+L + R R K WY+Y+
Sbjct: 64 LVLLASSGPRFYKSR--KPVPMILTVLGVISTWYFYR 98
>Hs7662639 [S] KOG4267 Predicted membrane protein
Length = 99
Score = 49.7 bits (117), Expect = 7e-07
Identities = 24/49 (48%), Positives = 29/49 (58%)
Query: 1 MDHPSFALAALATIGGTMGYIRKGSVPSLVAGLTFGGIYGYAGYLLKNN 49
MD F AAL T G GY R+G VPSL+AGL G + GY Y + N+
Sbjct: 1 MDLIGFGYAALVTFGSIFGYKRRGGVPSLIAGLFVGCLAGYGAYRVSND 49
>Hs7705501 [S] KOG4267 Predicted membrane protein
Length = 112
Score = 49.3 bits (116), Expect = 9e-07
Identities = 23/47 (48%), Positives = 28/47 (58%)
Query: 6 FALAALATIGGTMGYIRKGSVPSLVAGLTFGGIYGYAGYLLKNNADN 52
F AAL GG +GY++ GSVPSL AGL FG + G Y L + N
Sbjct: 15 FGYAALVASGGIIGYVKAGSVPSLAAGLLFGSLAGLGAYQLSQDPRN 61
>7291635 [S] KOG4267 Predicted membrane protein
Length = 112
Score = 47.4 bits (111), Expect = 3e-06
Identities = 25/61 (40%), Positives = 33/61 (53%), Gaps = 1/61 (1%)
Query: 1 MDHPSFALAALATIGGTMGYIRKGSVPSLVAGLTFGGIYGYAGYLLKNNADNGLEIALGA 60
+D + AA GG MGY + GS+PSL AGL FG + GY +L + L + LG
Sbjct: 3 VDWFGYVYAATVAAGGIMGYAKAGSIPSLGAGLAFGALLGYGAHLNSQDTPRPL-LQLGT 61
Query: 61 S 61
S
Sbjct: 62 S 62
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.321 0.143 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,332,286
Number of Sequences: 60738
Number of extensions: 169599
Number of successful extensions: 374
Number of sequences better than 1.0e-05: 5
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 369
Number of HSP's gapped (non-prelim): 5
length of query: 105
length of database: 30,389,216
effective HSP length: 81
effective length of query: 24
effective length of database: 25,469,438
effective search space: 611266512
effective search space used: 611266512
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)