ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactV1616    suspect: LH   S     KOG3856  Function unknown                                               Uncharacterized conserved protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactV1616 569076  569420 115  
         (115 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YJR082c [S] KOG3856 Uncharacterized conserved protein                  59   1e-09

>YJR082c [S] KOG3856 Uncharacterized conserved protein
          Length = 113

 Score = 58.9 bits (141), Expect = 1e-09
 Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 24/100 (24%)

Query: 16  RDALVQKKQLEAKWNSLEQEVYDKETEYLSQKPSSR--------------MGNILLGFQG 61
           + +L  +++ E  +++L+QE+YDKETEY S   ++                GNI+ GF  
Sbjct: 16  KKSLQDRREQEDTFDNLQQEIYDKETEYFSHNSNNNHSGHGGAHGSKSHYSGNIIKGFDT 75

Query: 62  FNKSSSAQQILSDHSHSSNAQPLDDNDRIFSLSSYLFAKQ 101
           F+K        S HSH+ +A   ++NDRIFSLSS  + KQ
Sbjct: 76  FSK--------SHHSHADSA--FNNNDRIFSLSSATYVKQ 105


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.307    0.122    0.324 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,795,112
Number of Sequences: 60738
Number of extensions: 204924
Number of successful extensions: 620
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 618
Number of HSP's gapped (non-prelim): 1
length of query: 115
length of database: 30,389,216
effective HSP length: 91
effective length of query: 24
effective length of database: 24,862,058
effective search space: 596689392
effective search space used: 596689392
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)