ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV1729 good BD KOG2328 Cell cycle control, cell division, chromosome partitioning Chromosome condensation complex Condensin, subunit H
r_klactV1729 good BD KOG2328 Chromatin structure and dynamics Chromosome condensation complex Condensin, subunit H
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV1729 612242 609927 -772
(772 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YBL097w [BD] KOG2328 Chromosome condensation complex Condensin s... 578 e-165
SPCC306.03c [BD] KOG2328 Chromosome condensation complex Condens... 274 4e-73
At2g32590 [BD] KOG2328 Chromosome condensation complex Condensin... 151 3e-36
ECU02g1290 [BD] KOG2328 Chromosome condensation complex Condensi... 79 3e-14
Hs14724682 [BD] KOG2328 Chromosome condensation complex Condensi... 78 6e-14
>YBL097w [BD] KOG2328 Chromosome condensation complex Condensin subunit H
Length = 728
Score = 578 bits (1491), Expect = e-165
Identities = 341/773 (44%), Positives = 461/773 (59%), Gaps = 84/773 (10%)
Query: 21 MMANFEEWIKMATDNKINSRNSWNFALIDYFHDLNVLKDEEDNINFQKASATLDGCVKIY 80
MMANFEEWIKMATDNKINSRNSWNFALIDYF+DL+VLKD E+NINFQKASATLDGC+KIY
Sbjct: 1 MMANFEEWIKMATDNKINSRNSWNFALIDYFYDLDVLKDGENNINFQKASATLDGCIKIY 60
Query: 81 SHRVDSVATETGKLLSGLAERKGRQIR----SNTXXXXXXXXXXXXXSLEVDPLTGLPIA 136
S RVDSV TETGKLLSGLA+RK SN ++E+DPLTG+PI+
Sbjct: 61 SSRVDSVTTETGKLLSGLAQRKTNGASNGDDSNGGNGEGLGGDSDEANIEIDPLTGMPIS 120
Query: 137 RDDPETLAKKKRTYNRVLETTLVDFESIRLKDLAQNLSIDPLFKKALADFDEGGAKSLLI 196
+DP+ ++R YNRVLETTLV+FE+I++K+L Q L IDPLFKKAL DFDEGGAKSLL+
Sbjct: 121 -NDPDVNNTRRRVYNRVLETTLVEFETIKMKELDQELIIDPLFKKALVDFDEGGAKSLLL 179
Query: 197 NTLHVDEKLRVVFDAXXXXXXXXXXXXLASTESQVQEENNEVSESAKETSEVFGLDSEKG 256
NTL++D RV+FDA L E ++ E ++ V + + + + + +
Sbjct: 180 NTLNIDNTARVIFDASIKDTQNVGQGKLQRKEEELIERDSLVDDENEPSQSL--ISTRND 237
Query: 257 SANEENVESTPDTSVTLLEDDILDLGVKFLDFNTIETSILCPSMDQLQSAVADIGKAKSF 316
S ++V S P +ED+IL LG+ F+ F+ I + S++QL++ V DI +AK F
Sbjct: 238 STVNDSVISAPS-----MEDEILSLGMDFIKFDQIAVCEISGSIEQLRNVVEDINQAKDF 292
Query: 317 VEGVNGQSDKFLTEKDLETLPELDAEAEFNYEMPPEDGEDVAVDAGSMDYVEPADNIHEP 376
+E VN + D FLTE++L+ +AE + DG D+ + E DN
Sbjct: 293 IENVNNRFDNFLTEEELQAAVPDNAEDD-------SDGFDMGMQQELCYPDENHDNTSHD 345
Query: 377 EEQLALSNQQNMSQIDDKSYGDASVLDQELLSYFDAAIGQNWRGREHWKVRNIK--DKLS 434
E+ D+ + S+ +++L++YFD + +NWRGREHWKVRN K + ++
Sbjct: 346 EQ-----------DDDNVNSTTGSIFEKDLMAYFDENLNRNWRGREHWKVRNFKKANLVN 394
Query: 435 KES---------VAKPQQPTEADGNHEPAVEKKVPKKQFEIDFLDLNDNIEEEIFANK-K 484
KES + D +K KK EIDF +D+ E+++FA+K +
Sbjct: 395 KESDLLEETRTTIGDTTDKNTTDDKSMDTKKKHKQKKVLEIDFFKTDDSFEDKVFASKGR 454
Query: 485 GFIDLSVKQRTNDSHFLLPDDYKFTTDKITRLFIKPEQKMSFFSHRRISKARLPGSLKFD 544
ID+ +K R ND+H+LLPDD+ F+TD+ITRLFIKP QKMS FSHR+ ++ + L
Sbjct: 455 TKIDMPIKNRKNDTHYLLPDDFHFSTDRITRLFIKPAQKMSLFSHRKHTRGDVSSGLFEK 514
Query: 545 DTEIKEVSN--IPEIADERFWAENYQLHEREEEHKQDDTQI-----ERSTNPSFEEDNGI 597
T SN IP IADE FWA+NY+ E+EE+ K+ ++ NP ++ +G+
Sbjct: 515 STVSANHSNNDIPTIADEHFWADNYERKEQEEKEKEQSKEVGDVVGGALDNPFEDDMDGV 574
Query: 598 DFNQAFEDED--------LDMDTKEDFVNTQGLVANNKMTYSRTSKKVDVRKLKNNVWKS 649
DFNQAFE D LD+ ED + + NK+TYSR SKKVDVR+LK NVW+S
Sbjct: 575 DFNQAFEGTDDNEEASVKLDLQDDEDH---KFPIRENKVTYSRVSKKVDVRRLKKNVWRS 631
Query: 650 IWQRLHVLKTDEQNGETTRNEETTQNDIESEAHLTEEKQGKQDISAEISTKAEGYDLKFT 709
I + Q ++ +N E + ND SE H +E STK +LKF+
Sbjct: 632 INNLI-------QEHDSRKNREQSSND--SETHTEDE-----------STK----ELKFS 667
Query: 710 DIAHDIVNMYTSSAKKDLSTSFCFICLLHLANEYGFTINDTTNYQDLDIRFPE 762
DI I MY+ KD+STSFCFICLLHLANE+G I T NY DL + + +
Sbjct: 668 DIIQGISKMYSDDTLKDISTSFCFICLLHLANEHGLQITHTENYNDLIVNYED 720
>SPCC306.03c [BD] KOG2328 Chromosome condensation complex Condensin subunit H
Length = 742
Score = 274 bits (700), Expect = 4e-73
Identities = 221/763 (28%), Positives = 350/763 (44%), Gaps = 126/763 (16%)
Query: 21 MMANFEEWIKMATDNKINSRNSWNFALIDYFHDLNVLKDEEDNINFQKASATLDGCVKIY 80
+++NFEEWIK+ATDNKINS N+WNFALIDYFHD+++L+D ED INFQKAS TLDGCVKIY
Sbjct: 67 VLSNFEEWIKLATDNKINSTNTWNFALIDYFHDMSLLRDGED-INFQKASCTLDGCVKIY 125
Query: 81 SHRVDSVATETGKLLSGLAERKGRQIRSNTXXXXXXXXXXXXXSLEVDPLTGLPIARDDP 140
+ R+DSVATETGKLLSGLA ++ T A +D
Sbjct: 126 TSRIDSVATETGKLLSGLA--NDSKVLQQTEEGED--------------------AENDD 163
Query: 141 ETLAKKK--RTYNRVLETTLVDFESIRLKDLAQNLSIDPLFKKALADFDEGGAKSLLINT 198
E L KKK + R ++T + DFESIR K S DPLFKK ADFDE GAK LL+N
Sbjct: 164 EDLQKKKERKRAQRSVKTLVKDFESIRAKKFELECSFDPLFKKMCADFDEDGAKGLLMNH 223
Query: 199 LHVDEKLRVVFDAXXXXXXXXXXXXLASTESQVQE-ENNEVSESAKETSEVFGLDSEKGS 257
L VD+ R+VFD S+++ +++ EN +V ++E ++S
Sbjct: 224 LCVDQHGRIVFD---------------SSDTVIKDLENKDVEAESQEAVVAAPIESH--- 265
Query: 258 ANEENVESTPDTSVTLLEDDILD---LGVKFLDFNTIETSILCPSMDQLQ---SAVADIG 311
DT +T + D+I G+ F I+ +CPS+ + D+
Sbjct: 266 ----------DTEMTNVHDNISRETLNGIYKCYFTDIDQLTICPSLQGFEFDSKGNLDVS 315
Query: 312 KAKSFVEGVNGQSDKFLTEKDLETLPELDAE-AEFNYEMPPEDG------EDVAVDAGSM 364
KS + VN + L + T+ + DA+ A + + E+G E++A D +
Sbjct: 316 LLKSLSDEVNMITTTSLVD---NTMEKTDADAASLSSDSDGEEGHIVHALEEMAYDEEN- 371
Query: 365 DYVEPADNIHEPEEQLALSNQQNMSQIDDKSYGD-----ASVLDQELLSYFDAAIGQNWR 419
YV+ + E ++ D + + ++ + YFD ++ +NW
Sbjct: 372 PYVDVVPKAMDESENPDFGVDTEVNMADGSTMNENYSIISTAAANGVYEYFDKSMKKNWA 431
Query: 420 GREHWKVRNIKDKLSKES-VAKPQQPTEADGNHEPAVEKKVPKKQFEID-FLDLNDNIE- 476
G EHW+++ ++ ++ S V E+ N ++ KK+ E+D +D ++
Sbjct: 432 GPEHWRIQALRKNINNASTVFNSSNTAESSDNVSRSLSSTERKKRRELDNAIDFLQEVDV 491
Query: 477 EEIFANKKGFIDLSVKQRTNDSHFLLPDDYKFTTDKITRLFIKPEQKMSFFSHRRISKAR 536
E +F + L + LLPDDY++ + ++ +LF+KP+ + + A
Sbjct: 492 EALFTPATSSLKLPKSHWKRHNRCLLPDDYQYDSKRLLQLFLKPKMSV-------LPNAD 544
Query: 537 LPGSLKFDDTEIKEVSNIPEIADERFWAENYQLHEREEEHKQDDTQIERSTNPSFEEDNG 596
G L+ + + D+ + Q H + + + ++ P D+
Sbjct: 545 GEGQLQLN-----------KALDDENDLDGIQPHGFDSDGSDN---VDEGIPPYGFGDSD 590
Query: 597 IDFNQAFEDEDLDMDTKEDFVNTQGLVANNKMTYSRTSKKVDVRKLKNNVWKSIWQRLHV 656
++ + T L + + Y++ +KKVDVR LK +WK +
Sbjct: 591 SPKQTPLLTPPSSSGFGDNLLLTARLAKPDMLNYAKRAKKVDVRVLKEKLWKCL------ 644
Query: 657 LKTDEQNGETTRNEETTQNDIESEAHLTEEKQGKQDISAEISTKAEGYDLKFTDIAHDIV 716
+ E T E + + IE +EE + K+ F + +
Sbjct: 645 ------DLENTIKENSINSHIEGSEMESEE--------TNMPVKS------FFSTVNQLE 684
Query: 717 NMYTSSAKKDLSTSFCFICLLHLANEYGFTINDTTNYQDLDIR 759
Y KD+STSF FIC+LHLANE+ + ++ D+ IR
Sbjct: 685 ETYEKKELKDISTSFAFICVLHLANEHNLELTSNEDFSDVFIR 727
>At2g32590 [BD] KOG2328 Chromosome condensation complex Condensin subunit H
Length = 704
Score = 151 bits (382), Expect = 3e-36
Identities = 190/767 (24%), Positives = 305/767 (38%), Gaps = 161/767 (20%)
Query: 17 NKSTMMANFEEWIKMATDNKINSRNSWNFALIDYFHDLNVLKDEEDN-INFQKASATLDG 75
+K ++ F+ IK+A++NKIN +N+W LID+ ++ ++DE + NFQKAS TL+
Sbjct: 71 DKQQILELFQNCIKLASENKINQKNTWELNLIDHLCEIIKVEDENNTETNFQKASCTLEA 130
Query: 76 CVKIYSHRVDSVATETGKLLSGLAERKGRQIRSNTXXXXXXXXXXXXXSLEVDPLTGLPI 135
VKIYS RVDSV +E K+L G+ T + V+ T
Sbjct: 131 GVKIYSMRVDSVHSEAYKVLGGI-----------TRAGHDDGGDHEDAAGAVENATN--- 176
Query: 136 ARDDPETLAKKKRTYNRV--LETTLVDFESIRLKDLAQNLSIDPLFKKALADFDEGGAKS 193
+KK+ ++ L T F+++ +K ++DPL+ + A FDEGGAK
Sbjct: 177 ---------QKKQPEKKISPLSTLEPSFDALNVKKFDVAFAVDPLYHQTSAQFDEGGAKG 227
Query: 194 LLINTLHVDEKLRVVFDAXXXXXXXXXXXXLASTESQVQEENNEVSESAK--ETSEVFGL 251
LL+N L V +V+FD+ QE ++ SA + SE L
Sbjct: 228 LLLNNLGVYGGCQVLFDS--------------------QEIPGKLVSSANKHDKSETIDL 267
Query: 252 DSEKGSANEENVESTPDTSVTLLEDDILDLGVKFLDFNTIETSIL-CPSMDQLQSAVADI 310
KG A ++ + V LL D+ VKF++ +E +L D++ ++ I
Sbjct: 268 SFVKGLALLADMPRSTIVHV-LLHYAFSDVVVKFVE--CVEQMVLNMRKKDEIVPSLRAI 324
Query: 311 GKAKSFVEGVNGQSDKFLTEKDLETLPELDAEAEFNYEMPPEDGE------DVAVDAGSM 364
F E SD F + ++ + +Y E E D +G +
Sbjct: 325 --INQFDEENQRPSDTFSCGQQTTESFDISHGNDASYADDDEGYENFGTSFDYEGQSGDV 382
Query: 365 D------YVEPA-DNIHEPEEQLALSNQQNMSQIDDKSYGDASVLDQELLSYFDAAIGQN 417
D EP N HE E +L + + +++ +V D LS ++ +
Sbjct: 383 DENFGPNEAEPIYSNFHEEVEPASLQDMDSDDRLE-------NVDDYLFLSLGISSKQNS 435
Query: 418 WRGREHWKVRNIKDKLSKESVAKPQQPTEADGNHEPAVEKKVPKKQFEIDFLDLNDNIEE 477
W G +HWK R K P ++ P +K KKQ E + LD +EE
Sbjct: 436 WAGPDHWKYRKTKG---------PDVQPASEIKSSPPAKKTRKKKQAEPE-LDFAKALEE 485
Query: 478 E---IFANKKGFIDLSVKQRTNDSHFLLPDDYKFTTDKITRLFIKPEQKMSFFSHRRISK 534
E IFA K L + LP+D + + + +LF+ P + HR
Sbjct: 486 EMPDIFAPPKNPKTLLLPASRTPCQTKLPEDCHYQPENLIKLFLLPNVMVWLAKHRPSET 545
Query: 535 ARLPGSLKFDDTEIKEVSNIPEIADERFWAENYQLHEREEEHKQDDTQIERSTNPSFEED 594
+R + DD +E E D+ +++D
Sbjct: 546 SR----QQPDD------------------------YEHGESWGNDNV---------YDDD 568
Query: 595 NGIDFNQAFEDEDLDMDTKED---FVNTQGLVANNKMTYSRTSKKVDVRKLKNNVWKSIW 651
+G F+D + D ED ++ V + Y + SK+VDV+ LK +W+ +
Sbjct: 569 DG-----PFDDNENDQSDAEDTNTLISQPRQVNKIDVQYDKASKQVDVQVLKETLWECL- 622
Query: 652 QRLHVLKTDEQNGETTRNEETTQNDIESEAHLTEEKQGKQDISAEISTKAEGYDLKFTDI 711
+E+ Q I++ EE Q + S F D
Sbjct: 623 ------------------QESHQPPIQNLIVQDEEHQQEPPESRSFKVLL----ASFPD- 659
Query: 712 AHDIVNMYTSSAKKDLSTSFCFICLLHLANEYGFTINDTTNYQDLDI 758
+ + +D+S CFICLLHLANE+ ++ + N DL I
Sbjct: 660 -----DCQAAERTQDISPHLCFICLLHLANEHNLSLIGSQNLDDLTI 701
>ECU02g1290 [BD] KOG2328 Chromosome condensation complex Condensin subunit H
Length = 440
Score = 78.6 bits (192), Expect = 3e-14
Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 28 WIKMATDNKINSRNSWNFALIDYFHDLNVLKDEEDNINFQKASATLDGCVKIYSHRVDSV 87
W+K A +NKI ++N+W LID+F +++ + E INFQKAS TLDGC K+YS RVD V
Sbjct: 9 WLKAAAENKITTKNTWKSTLIDHFTNIDEFR-ERQGINFQKASCTLDGCAKVYSTRVDDV 67
Query: 88 ATETGKLLSGLAERKGRQ 105
+ +LL G + R+
Sbjct: 68 SENAMRLLEGSGREEARK 85
>Hs14724682 [BD] KOG2328 Chromosome condensation complex Condensin subunit H
Length = 741
Score = 77.8 bits (190), Expect = 6e-14
Identities = 77/366 (21%), Positives = 149/366 (40%), Gaps = 70/366 (19%)
Query: 408 SYFDAAIGQNWRGREHWKVRNIKDKLSKESVAKPQQPTEADGNHEPAVEKKVPKKQFEID 467
SYF W G +HW+ R P++ +A E +KK KK FEID
Sbjct: 429 SYFSPRTMSMWAGPDHWRFR-------------PRRKQDAPSQSEN--KKKSTKKDFEID 473
Query: 468 FLDLNDNIEEEIFANKKGFIDLSVKQRTNDSHF---LLPDDYKFTTDKITRLFIKPEQKM 524
F D+I+ +++ K + K + ++ LP D+ + D + +L +KP ++
Sbjct: 474 F---EDDIDFDVYFRKTKAATILTKSTLENQNWRATTLPTDFNYNVDTLVQLHLKPGTRL 530
Query: 525 SFFSHRRISKARLPGSLKFDDTEIKEVSNIPEIADERFWAENYQLHEREEEHKQD----- 579
++++ + +++ E + +N + ++ + Q + ++E D
Sbjct: 531 L-----KMAQGHRVETEHYEEIEDYDYNNPNDTSN---FCPGLQAADSDDEDLDDLFVGP 582
Query: 580 ----DTQIERSTNPSFEEDNGIDFNQAFEDEDLDMDT--KEDFVNTQGLVANNKMTYSRT 633
D P + NG E + LD+ T + + V V ++ Y++T
Sbjct: 583 VGNSDLSPYPCHPPKTAQQNG----DTPEAQGLDITTYGESNLVAEPQKVNKIEIHYAKT 638
Query: 634 SKKVDVRKLKNNVWKSIWQRLHVLKTDEQNGETTRNEETTQNDIESEAHLTEEKQGKQDI 693
+KK+D++KLK ++W + T + E++A + GK+
Sbjct: 639 AKKMDMKKLKQSMWSLL---------------------TALSGKEADAEANHREAGKEAA 677
Query: 694 SAEISTKAEGYDLKFTDIAHDIVNMYTSSAKKDLSTSFCFICLLHLANEYGFTINDTTNY 753
AE++ + + + D+ ++LS F CLLHLANE + T +
Sbjct: 678 LAEVADEK-----MLSGLTKDLQRSLPPVMAQNLSIPLAFACLLHLANEKNLKLEGTEDL 732
Query: 754 QDLDIR 759
D+ +R
Sbjct: 733 SDVLVR 738
Score = 74.3 bits (181), Expect = 7e-13
Identities = 50/189 (26%), Positives = 87/189 (45%), Gaps = 21/189 (11%)
Query: 15 FTNKSTMMANFEEWIKMATDNKINSRNSWNFALIDYFHDLNVLKDEEDNINFQKASATLD 74
FTN + + ++ IK++T+NKI ++N++ LID+ ++ KD E NF+ A+ TLD
Sbjct: 102 FTN-TQITEHYSTCIKLSTENKITTKNAFGLHLIDFMSEILKQKDTEPT-NFKVAAGTLD 159
Query: 75 GCVKIYSHRVDSVATETGKLLSGLAERKGRQIRSNTXXXXXXXXXXXXXSLEVDPLTGLP 134
KIY+ RVD+V + ++L GL + V P
Sbjct: 160 ASTKIYAVRVDAVHADVYRVLGGLGKDAPSLEEVEGHVADGSATEMGTTKKAVKP----- 214
Query: 135 IARDDPETLAKKKRTYNRVLETTLVDFESIRLKDLAQNLSIDPLFKKALADFDEGGAKSL 194
KK+ +R +E + ++ + + + IDP+F+K A FDE +
Sbjct: 215 -----------KKKHLHRTIEQNI---NNLNVSEADRKCEIDPMFQKTAASFDECSTAGV 260
Query: 195 LINTLHVDE 203
++TLH +
Sbjct: 261 FLSTLHCQD 269
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.311 0.130 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,683,351
Number of Sequences: 60738
Number of extensions: 2028691
Number of successful extensions: 6926
Number of sequences better than 1.0e-05: 5
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 6888
Number of HSP's gapped (non-prelim): 15
length of query: 772
length of database: 30,389,216
effective HSP length: 114
effective length of query: 658
effective length of database: 23,465,084
effective search space: 15440025272
effective search space used: 15440025272
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)