ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV1763 good U KOG0439 Intracellular trafficking, secretion, and vesicular transport VAMP-associated protein involved in inositol metabolism
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV1763 624831 624010 -274
(274 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YER120w [U] KOG0439 VAMP-associated protein involved in inositol... 171 1e-42
SPBC16G5.05c [U] KOG0439 VAMP-associated protein involved in ino... 97 3e-20
SPAC17C9.12 [U] KOG0439 VAMP-associated protein involved in inos... 87 3e-17
Hs4759302 [U] KOG0439 VAMP-associated protein involved in inosit... 79 7e-15
Hs20070156 [U] KOG0439 VAMP-associated protein involved in inosi... 71 1e-12
CE09902 [U] KOG0439 VAMP-associated protein involved in inositol... 71 2e-12
7290454 [U] KOG0439 VAMP-associated protein involved in inositol... 67 4e-11
At1g08820 [U] KOG0439 VAMP-associated protein involved in inosit... 65 1e-10
At5g47180 [U] KOG0439 VAMP-associated protein involved in inosit... 62 9e-10
At3g60600 [U] KOG0439 VAMP-associated protein involved in inosit... 61 1e-09
Hs17456917 [U] KOG0439 VAMP-associated protein involved in inosi... 61 2e-09
At2g45140 [U] KOG0439 VAMP-associated protein involved in inosit... 60 3e-09
CE10314_1 [U] KOG0439 VAMP-associated protein involved in inosit... 59 1e-08
At4g00170_1 [U] KOG0439 VAMP-associated protein involved in inos... 58 1e-08
7295165 [U] KOG0439 VAMP-associated protein involved in inositol... 54 2e-07
At1g51270 [U] KOG0439 VAMP-associated protein involved in inosit... 54 3e-07
CE01966 [U] KOG0439 VAMP-associated protein involved in inositol... 50 3e-06
7295411 [U] KOG0439 VAMP-associated protein involved in inositol... 49 6e-06
>YER120w [U] KOG0439 VAMP-associated protein involved in inositol metabolism
Length = 244
Score = 171 bits (433), Expect = 1e-42
Identities = 92/227 (40%), Positives = 129/227 (56%), Gaps = 2/227 (0%)
Query: 48 APFTSQAAEHITIKNDSEQTIAFKVKTTAPKVYCVRPNAALVPAGESVDVQVILLGLKEE 107
+P T Q+ E+ +I N+S+QTIAFKVKTTAPK YCVRPNAA+V GE++ VQVI LGL EE
Sbjct: 15 SPLTEQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQVQVIFLGLTEE 74
Query: 108 PTPDFKCKDKFLVIALPAPYDLGELSVAEAWPQLEAEFKNKGLSKKIKVNYQL--DAEPR 165
P DFKC+DKFLVI LP+PYDL +VA+ W LEAEFK + +SKKIKV Y + D P
Sbjct: 75 PAADFKCRDKFLVITLPSPYDLNGKAVADVWSDLEAEFKQQAISKKIKVKYLISPDVHPA 134
Query: 166 VVENLETDNVQTETVIPSAKETIASGSKATEESASEPVQKKSVPVASANTDLDTEKPKVV 225
+N++ + E V+ ++ +E +EP + V V +K
Sbjct: 135 QNQNIQENKETVEPVVQDSEPKEVPAVVNEKEVPAEPETQPPVQVKKEEVPPVVQKTVPH 194
Query: 226 ESEPKLDEKVKSDTSANTEIIAEPASTSNIAPAVVIWIVIGFLLWYW 272
E+E + + + E PA + + + I + + L+ W
Sbjct: 195 ENEKQTSNSTPAPQNQIKEAATVPAENESSSMGIFILVALLILVLGW 241
>SPBC16G5.05c [U] KOG0439 VAMP-associated protein involved in inositol metabolism
Length = 383
Score = 96.7 bits (239), Expect = 3e-20
Identities = 53/141 (37%), Positives = 82/141 (57%), Gaps = 15/141 (10%)
Query: 44 VFVIAPFTSQAAEHITIKNDSEQTIAFKVKTTAPKVYCVRPNAALVPAGESVDVQVILLG 103
+F PFT+ + E I++ N + + + FKVKTTAPK YCVRPN+ + +V+VQV+L
Sbjct: 9 LFFYPPFTTMSKELISVHNPNPEPVIFKVKTTAPKHYCVRPNSGKIEPKSTVNVQVLLQA 68
Query: 104 LKEEPTPDFKCKDKFLVIALPAPYDLGELSVA------EAWPQLEAEFKNKGLSKKIKVN 157
+KEEP PDFKC+DKFL+ ++ +G+ + E W ++E + ++ +KI+
Sbjct: 69 MKEEPAPDFKCRDKFLIQSMA----IGDADTSNVENYHEFWTEMEKQGRSI-FDRKIRCV 123
Query: 158 YQLDAEP----RVVENLETDN 174
Y P + VEN T N
Sbjct: 124 YSTKQPPQSADKQVENTSTSN 144
>SPAC17C9.12 [U] KOG0439 VAMP-associated protein involved in inositol metabolism
Length = 319
Score = 86.7 bits (213), Expect = 3e-17
Identities = 64/212 (30%), Positives = 95/212 (44%), Gaps = 15/212 (7%)
Query: 49 PFTSQAAEHITIKNDSEQTIAFKVKTTAPKVYCVRPNAALVPAGESVDVQVILLGLKEEP 108
P T + ++N + I FKVKTTAPK YCVRPN + A +V V+VIL L EP
Sbjct: 14 PLTRLVKCDLELRNTAPYPIGFKVKTTAPKQYCVRPNGGRIEANSAVSVEVILQPLDHEP 73
Query: 109 TPDFKCKDKFLVIALPAPYDLGELSVAEAWPQLEAEFKNKGLSKKIKVNYQ---LDAEPR 165
P KC+DKFLV + +L + +A+ W Q+ K +KI+ Y A
Sbjct: 74 APGTKCRDKFLVQSTELKPELQGMDIADIWTQVS---KANISERKIRCVYSEGPSTANAH 130
Query: 166 VVENLETDNVQTETVIPSAKETIASGSKATEESASEPVQKKSVPVASAN--------TDL 217
+ + T ++ SA + + + +S S+ + ++P AN T
Sbjct: 131 ANAHHQPAQTTTTSIPTSATDNYTTVNGNVNQSYSKGIDGTALPSTHANPVAAPSTATTQ 190
Query: 218 DTEKPKV-VESEPKLDEKVKSDTSANTEIIAE 248
T+ PK S K E + A T +AE
Sbjct: 191 HTQLPKTSAVSHQKPHEAPSTAVKAPTATVAE 222
>Hs4759302 [U] KOG0439 VAMP-associated protein involved in inositol metabolism
Length = 243
Score = 79.0 bits (193), Expect = 7e-15
Identities = 59/231 (25%), Positives = 112/231 (47%), Gaps = 23/231 (9%)
Query: 49 PFTSQAAEHITIKNDSEQTIAFKVKTTAPKVYCVRPNAALVPAGESVDVQVILLGLKEEP 108
PFT ++ + N +++ + FKVKTTAP+ YCVRPN+ ++ AG S++V V+L +P
Sbjct: 21 PFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASINVSVMLQPFDYDP 80
Query: 109 TPDFKCKDKFLVIALPAPYDLGELSVAEAWPQLEAEFKNKGLSKKIKVNYQLDAEPRVVE 168
K K KF+V ++ AP D ++ W + + E + K++ ++L AE
Sbjct: 81 NE--KSKHKFMVQSMFAPTDTSDMEA--VWKEAKPE---DLMDSKLRCVFELPAENDKPH 133
Query: 169 NLETDNVQTETVIPSAKETIASGSKATEESASEPVQKKSVPVASANTDLDTEKPKVVESE 228
++E + + + T ++K SK+ S + KK V L E ++ E
Sbjct: 134 DVEINKIISTT---ASKTETPIVSKSLSSSLDDTEVKK---VMEECKRLQGEVQRLREEN 187
Query: 229 PKLDE----KVKSDTSANTEIIA------EPASTSNIAPAVVIWIVIGFLL 269
+ E +++ +N+ I A E ++ + VV++ ++G ++
Sbjct: 188 KQFKEEDGLRMRKTVQSNSPISALAPTGKEEGLSTRLLALVVLFFIVGVII 238
>Hs20070156 [U] KOG0439 VAMP-associated protein involved in inositol metabolism
Length = 242
Score = 71.2 bits (173), Expect = 1e-12
Identities = 56/208 (26%), Positives = 97/208 (45%), Gaps = 28/208 (13%)
Query: 49 PFTSQAAEHITIKNDSEQTIAFKVKTTAPKVYCVRPNAALVPAGESVDVQVILLGLKEEP 108
PFT ++ ++N S++ + FKVKTTAP+ YCVRPN+ ++ G +V V V+L +P
Sbjct: 21 PFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVMLQPFDYDP 80
Query: 109 TPDFKCKDKFLVIALPAPYDLGELSVAEAWPQLEAEFKNKGLSKKIKVNYQLDAEPRVVE 168
K K KF+V + AP + ++ W K+ K + +D++ R V
Sbjct: 81 NE--KSKHKFMVQTIFAPPNTSDMEA--VW-------------KEAKPDELMDSKLRCVF 123
Query: 169 NLETDNVQTETVIPSAKETIASGSKATEESASEPVQKKSVPVASANTDLDTEKPKVVESE 228
+ +N + + P SKA +AS+ Q +P + + DTE K++E
Sbjct: 124 EMPNENDKLNDMEP---------SKAVPLNASK--QDGPMPKPHSVSLNDTETRKLMEEC 172
Query: 229 PKLDEKVKSDTSANTEIIAEPASTSNIA 256
+L ++ + N + E +A
Sbjct: 173 KRLQGEMMKLSEENRHLRDEGLRLRKVA 200
>CE09902 [U] KOG0439 VAMP-associated protein involved in inositol metabolism
Length = 245
Score = 70.9 bits (172), Expect = 2e-12
Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 14/148 (9%)
Query: 49 PFTSQAAEHITIKNDSEQTIAFKVKTTAPKVYCVRPNAALVPAGESVDVQVILLGLKEEP 108
PF+ H+T+KN S + FKVKTTAPK YCVRPN+ L+ +G+S + V+L L E
Sbjct: 21 PFSDVVTSHMTLKNTSTNPVCFKVKTTAPKQYCVRPNSGLLKSGDSKQITVMLQPL--EG 78
Query: 109 TPDFKCKDKFLVIALPAPYDLGELSVAEAWPQLEAEFK----NKGLSKKIKVNYQLDAEP 164
P + KF+V + AP +E P LE+ +K + K+ V + +P
Sbjct: 79 IPSDAGRHKFMVQSCVAP--------SEDLPDLESVWKIIDPAELTYSKLMVTFVDKRDP 130
Query: 165 RVVENLETDNVQTETVIPSAKETIASGS 192
++ +T V+ E S+ + GS
Sbjct: 131 ASGDDTKTFAVRNEDSFASSGQAQELGS 158
>7290454 [U] KOG0439 VAMP-associated protein involved in inositol metabolism
Length = 269
Score = 66.6 bits (161), Expect = 4e-11
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 17/222 (7%)
Query: 31 IFAIPLFNVIYLSVFVIAPFTSQAAEHITIKNDSEQTIAFKVKTTAPKVYCVRPNAALVP 90
+F +PL + + PFT +T++N+S + FK+KTTAPK YCVRPN +
Sbjct: 5 LFDLPLTIEPEHELRFVGPFTRPVVTIMTLRNNSALPLVFKIKTTAPKRYCVRPNIGKII 64
Query: 91 AGESVDVQVILLGLKEEPTPDFKCKDKFLVIALPAPYDLGELSVAEAWPQLEAEFKNKGL 150
S V++ L + K K KF+V ++ AP D + + W LE E + +
Sbjct: 65 PFRSTQVEICLQPFVYDQQE--KNKHKFMVQSVLAPMDADLSDLNKLWKDLEPE---QLM 119
Query: 151 SKKIKVNYQLDAEPRVVENLETDNVQTETVIPSAKETIASGSKATEESASEPVQKKSVPV 210
K+K +++ P N E N + GS S++ +S P
Sbjct: 120 DAKLKCVFEM---PTAEANAE--NTSGGGAVGGGTGAAGGGSAGANTSSASAEALESKPK 174
Query: 211 ASANTDLDTEKP----KVVESEPKLDEKVKSDTSANTEIIAE 248
S+ D KP + ES L ++K+ N E+ E
Sbjct: 175 LSSE---DKFKPSNLLETSESLDLLSGEIKALRECNIELRRE 213
>At1g08820 [U] KOG0439 VAMP-associated protein involved in inositol metabolism
Length = 441
Score = 65.1 bits (157), Expect = 1e-10
Identities = 33/87 (37%), Positives = 49/87 (55%), Gaps = 1/87 (1%)
Query: 34 IPLFNVIYLSVFVIAPFTSQAAEHITIKNDSEQTIAFKVKTTAPKVYCVRPNAALVPAGE 93
+PL ++ ++ Q + + + N + +AFKVKTT+PK YCVRPN +V
Sbjct: 3 MPLLDIQPRTLQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVGVVAPKS 62
Query: 94 SVDVQVILLGLKEEPTPDFKCKDKFLV 120
+ + VI+ K EP PD CKDKFL+
Sbjct: 63 TCEFTVIMQAFK-EPPPDMVCKDKFLI 88
>At5g47180 [U] KOG0439 VAMP-associated protein involved in inositol metabolism
Length = 220
Score = 62.0 bits (149), Expect = 9e-10
Identities = 33/77 (42%), Positives = 48/77 (61%), Gaps = 3/77 (3%)
Query: 58 ITIKNDSEQTIAFKVKTTAPKVYCVRPNAALVPAGESVDVQVILLGLKEEPTPDFKCKDK 117
+ + N +E +AFKVKTT+PK Y VRPN ++ +S ++V L +E P PD +CKDK
Sbjct: 31 LKVANKTENYVAFKVKTTSPKKYFVRPNTGVIQPWDSCIIRVTLQAQREYP-PDMQCKDK 89
Query: 118 FLV--IALPAPYDLGEL 132
FL+ +P D+ EL
Sbjct: 90 FLLQSTIVPPHTDVDEL 106
>At3g60600 [U] KOG0439 VAMP-associated protein involved in inositol metabolism
Length = 250
Score = 61.2 bits (147), Expect = 1e-09
Identities = 39/108 (36%), Positives = 57/108 (52%), Gaps = 13/108 (12%)
Query: 60 IKNDSEQTIAFKVKTTAPKVYCVRPNAALVPAGESVDVQVILLGLKEEPTPDFKCKDKFL 119
+ N ++ +AFKVKTT PK YCVRPN +V + +V V + KE P+ D +CKDKFL
Sbjct: 46 LTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLPRSTCEVLVTMQAQKEAPS-DMQCKDKFL 104
Query: 120 ---VIALPAPYDLGELSVAEAWPQLEAEFKNKGLSKKIKVNYQLDAEP 164
VIA P ++ E P++ ++ K++V Y P
Sbjct: 105 LQGVIASPG------VTAKEVTPEMAG---HRVEETKLRVTYVAPPRP 143
>Hs17456917 [U] KOG0439 VAMP-associated protein involved in inositol metabolism
Length = 130
Score = 60.8 bits (146), Expect = 2e-09
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 49 PFTSQAAEHITIKNDSEQTIAFKVKTTAPKVYCVRPNAALVPAGESVDVQVILLGLKEEP 108
PFT ++ ++N S++ + FKVKTT P YCVRPN+ ++ G +V V V+L +P
Sbjct: 56 PFTDVVTTNLKLRNPSDRKVCFKVKTTVPHRYCVRPNSGIIDPGSTVTVSVMLQPFDYDP 115
Query: 109 TPDFKCKDKFLV 120
K K KF+V
Sbjct: 116 NE--KSKHKFMV 125
>At2g45140 [U] KOG0439 VAMP-associated protein involved in inositol metabolism
Length = 239
Score = 60.1 bits (144), Expect = 3e-09
Identities = 33/66 (50%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 62 NDSEQTIAFKVKTTAPKVYCVRPNAALVPAGESVDVQVILLGLKEEPTPDFKCKDKFL-- 119
N ++ +AFKVKTT PK YCVRPN +V S +V V + KE P D +CKDKFL
Sbjct: 31 NKTDNYVAFKVKTTNPKKYCVRPNTGVVHPRSSSEVLVTMQAQKEAPA-DLQCKDKFLLQ 89
Query: 120 -VIALP 124
V+A P
Sbjct: 90 CVVASP 95
>CE10314_1 [U] KOG0439 VAMP-associated protein involved in inositol metabolism
Length = 129
Score = 58.5 bits (140), Expect = 1e-08
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 49 PFTSQAAEHITIKNDSEQTIAFKVKTTAPKVYCVRPNAALVPAGESVDVQVILLGLKEEP 108
PF ++T+ N S+ + F VKTT P YCVRPN ++ G+S ++V+L L++ P
Sbjct: 19 PFDHVITTYMTLTNISQSPVCFLVKTTVPNSYCVRPNRGILNIGDSKQIEVMLQPLEKVP 78
Query: 109 TPDFKCKDKFLVIALPAP 126
PD K + KFLV + AP
Sbjct: 79 -PDAK-QHKFLVQSCVAP 94
>At4g00170_1 [U] KOG0439 VAMP-associated protein involved in inositol metabolism
Length = 291
Score = 58.2 bits (139), Expect = 1e-08
Identities = 62/198 (31%), Positives = 88/198 (44%), Gaps = 35/198 (17%)
Query: 66 QTIAFKVKTTAPKVYCVRPNAALVPAGESVDVQV-----------ILLGLKEEPTPDFKC 114
Q +AFKVKTT P+ YCVRPN +V G+S +V V + + ++E D +C
Sbjct: 37 QCVAFKVKTTNPRKYCVRPNTGVVLPGDSCNVTVNNTKDDCCFVSVTMQAQKEAPLDMQC 96
Query: 115 KDKFLVIALPAPYDLGELSVAEAWPQLEAEFKNKGLSK-----KIKVNYQLDAEP--RVV 167
KDKFLV + +S ++ AE NK + K++V Y + A P V
Sbjct: 97 KDKFLVQTV-------VVSDGTTSKEVLAEMFNKEAGRVIEDFKLRVVY-IPANPPSPVP 148
Query: 168 ENLETDNVQTETVIPSAKETIASGSKATEESAS---EPVQKKSVPVASANTDLDTEKPKV 224
E E N ++ IAS S + + S E +KS S + L EK
Sbjct: 149 EGSEEGNSPMASL-----NDIASQSASLFDDVSRTFEETSEKSSEAWSMISKLTEEKTSA 203
Query: 225 VESEPKLD-EKVKSDTSA 241
+ KL E V+ D SA
Sbjct: 204 TQQSQKLRLELVRVDPSA 221
>7295165 [U] KOG0439 VAMP-associated protein involved in inositol metabolism
Length = 200
Score = 54.3 bits (129), Expect = 2e-07
Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 11/113 (9%)
Query: 49 PFTSQAAEHITIKNDSE-QTIAFKVKTTAPKVYCVRPNAALVPAGESVDVQVILLGLKEE 107
PF + + IKN S+ Q +AFK+KTT PK++ VRPN ++ + V V + + + +E
Sbjct: 22 PFNRSVSRKLVIKNTSKTQRMAFKMKTTTPKLFYVRPNIGVLGPEQKVSVDIFMQPILQE 81
Query: 108 PTPDFKCKDKFLVIALPAPYDLGELSVAEAWPQLEAEFKNKGLSKKIKVNYQL 160
K + KFL++A D+ + V E W + +N +++ K+ +L
Sbjct: 82 ---QIKKRHKFLLLAAEVTGDISD--VQEFW-----KMQNPNETRETKIKCEL 124
>At1g51270 [U] KOG0439 VAMP-associated protein involved in inositol metabolism
Length = 289
Score = 53.5 bits (127), Expect = 3e-07
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 58 ITIKNDSEQTIAFKVKTTAPKVYCVRPNAALVPAGESVDVQVILLGLKEEPTPDFKCKDK 117
+ + N +E +AFK KTT K Y VRPN +V S +V VI+ LKE P D +C+DK
Sbjct: 150 LNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLPRSSCEVLVIMQALKEAPA-DMQCRDK 208
Query: 118 FL 119
L
Sbjct: 209 LL 210
>CE01966 [U] KOG0439 VAMP-associated protein involved in inositol metabolism
Length = 279
Score = 50.1 bits (118), Expect = 3e-06
Identities = 52/217 (23%), Positives = 88/217 (39%), Gaps = 22/217 (10%)
Query: 46 VIAPFTSQAAEHITIKNDSEQTIAFKVKTTAPKVYCVRPNAALVPAGESVDVQVILL-GL 104
+I + Q + + +KN IAF+V+T P Y V P+ + GE V +Q+ L+ G
Sbjct: 34 IIESNSGQIDKTLELKNIYPCRIAFRVRTNGPTRYTVCPSKGFLSNGEKVAIQITLIDGT 93
Query: 105 KEEPTPDFKCKDKFLVIALPAPYDLGELSVAEAWPQLEAEFKNKGLSKKIKVNYQLDAEP 164
K ++ +F+V A+P+P D + P F N ++K
Sbjct: 94 K------YQSNHQFIVQAMPSPGDFADRKFIWKQPNFLGIFTN----TRVKT-------M 136
Query: 165 RVVENLETDNVQTETVIPSAKETIASGSKATEESASEPVQKKSVPVASANTDLDTEKPKV 224
R ++L N ++ + + ++ S A+ ES P SVP S + + K
Sbjct: 137 RPAQSLPKSNPKSPAKVSTPTDSGMSSPVASSESLVTP----SVPSWSKSPSSPIDHGKF 192
Query: 225 VESEPKLDEKVKSDTSANTEIIAEPASTSNIAPAVVI 261
E+ L +VK +E S N AV +
Sbjct: 193 AENINDLSVQVKKAIDEKNTRTSEMVSVVNQIKAVEV 229
>7295411 [U] KOG0439 VAMP-associated protein involved in inositol metabolism
Length = 363
Score = 49.3 bits (116), Expect = 6e-06
Identities = 30/91 (32%), Positives = 49/91 (52%), Gaps = 5/91 (5%)
Query: 50 FTSQAAEH-ITIKNDSEQTIAFKVKTTAPKVYCVRPNAALVPAGESVDVQVILLGLKEEP 108
F S+ AE +TIK+ + + +K++TT+P+ + VRP ++ + + + LK E
Sbjct: 29 FNSKNAEATMTIKSIATSAVTYKIQTTSPEKFRVRPRCGIIQPNQEATINI---WLKSEH 85
Query: 109 TPDFKCKDKFLVIALPAP-YDLGELSVAEAW 138
KDKFLV+A+ AP + G V E W
Sbjct: 86 KLSDDSKDKFLVMAMVAPGGECGGADVTELW 116
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.132 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,555,443
Number of Sequences: 60738
Number of extensions: 641243
Number of successful extensions: 3255
Number of sequences better than 1.0e-05: 18
Number of HSP's better than 0.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3235
Number of HSP's gapped (non-prelim): 19
length of query: 274
length of database: 30,389,216
effective HSP length: 105
effective length of query: 169
effective length of database: 24,011,726
effective search space: 4057981694
effective search space used: 4057981694
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)