ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV1840 good K KOG0570 Transcription Transcriptional coactivator
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV1840 650897 650259 -213
(213 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOL135c [K] KOG0570 Transcriptional coactivator 182 4e-46
At5g03220 [K] KOG0570 Transcriptional coactivator 75 7e-14
At5g03500_1 [K] KOG0570 Transcriptional coactivator 75 9e-14
Hs4758064 [K] KOG0570 Transcriptional coactivator 70 2e-12
SPBC14F5.08 [K] KOG0570 Transcriptional coactivator 68 8e-12
7299354_1 [K] KOG0570 Transcriptional coactivator 57 2e-08
>YOL135c [K] KOG0570 Transcriptional coactivator
Length = 222
Score = 182 bits (461), Expect = 4e-46
Identities = 95/219 (43%), Positives = 130/219 (58%), Gaps = 29/219 (13%)
Query: 5 NEVSSLYPPPPPFIQFFTEENSKLFRECGKDEEKLAKCTTKQREQ----------LKYFV 54
NEVSSLYPPPPP+++FFT+ N + + + + AK T L Y +
Sbjct: 7 NEVSSLYPPPPPYVKFFTQSNLEKLPKYKEKKAASAKQTAPNNSNGGSEEEITCALDYLI 66
Query: 55 KPELPRDGSYRAFGNVWKIKDELPELSQMGIEQLYRKRESVTELENGTTTEVEPSPQDSQ 114
P +P++ YRAFG++W++KD+LP+L MG+ QLY+K +TE E
Sbjct: 67 PPPMPKNQQYRAFGSIWQVKDQLPDLESMGLTQLYKK-----------STENE------- 108
Query: 115 SGTNYENKIQESKKLMKSXXXXXXXXXXXXXVDSSRYEKKLDEIRVIAINIHHLLNEYRP 174
TNY+ KIQE +KL+KS ++ YE+K++ IR I +NIHHLLNEYRP
Sbjct: 109 -STNYQYKIQELRKLLKSLLLNYLELIGVLSINPDMYERKVENIRTILVNIHHLLNEYRP 167
Query: 175 HQSRESLIMLFEEQLEHKRKEMEHINKVCDEVESKLAQL 213
HQSRESLIML EEQLE+KR E+ I +VC +V KL +
Sbjct: 168 HQSRESLIMLLEEQLEYKRGEIREIEQVCKQVHDKLTSI 206
>At5g03220 [K] KOG0570 Transcriptional coactivator
Length = 168
Score = 75.1 bits (183), Expect = 7e-14
Identities = 52/204 (25%), Positives = 90/204 (43%), Gaps = 49/204 (24%)
Query: 8 SSLYPPPPPFIQFFTEENSKLFRECGKDEEKLAKCTTKQREQLKYFVKPELPRDGSYRAF 67
++ YPPPPP+ + + + + E +P P +G+Y F
Sbjct: 3 TATYPPPPPYYRLYKDYS----------------------ENPNSAPEPPPPIEGTYVCF 40
Query: 68 GNVWKIKDELPELSQMGIEQLYRKRESVTELENGTTTEVEPSPQDSQSGTNYENKIQESK 127
G + +D LP L + G+ QLY K S +Y+N+++
Sbjct: 41 GGNYTTEDVLPSLEEQGVPQLYPK----------------------DSNLDYKNELRSLN 78
Query: 128 KLMKSXXXXXXXXXXXXXVDS-SRYEKKLDEIRVIAINIHHLLNEYRPHQSRESLIMLFE 186
+ ++ VD S+Y K++ EI I N+HHLLN RPHQ+R +LI + E
Sbjct: 79 RELQ----LHILELADVLVDRPSQYAKRIGEISSIFKNLHHLLNSLRPHQARATLIHIME 134
Query: 187 EQLEHKRKEMEHINKVCDEVESKL 210
Q++ +++ +E I + +E + L
Sbjct: 135 LQIQQRKQAVEDIKRRREEAQRLL 158
>At5g03500_1 [K] KOG0570 Transcriptional coactivator
Length = 166
Score = 74.7 bits (182), Expect = 9e-14
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 47/203 (23%)
Query: 8 SSLYPPPPPFIQFFTEENSKLFRECGKDEEKLAKCTTKQREQLKYFVKPELPRDGSYRAF 67
++ YPPPPP+ +L+++ ++ + + P P +G+Y F
Sbjct: 3 TATYPPPPPYY--------RLYKDFSENTDSAPE--------------PPPPIEGTYVCF 40
Query: 68 GNVWKIKDELPELSQMGIEQLYRKRESVTELENGTTTEVEPSPQDSQSGTNYENKIQESK 127
G + +D LP L + G+ QLY P+DS N + K +E +
Sbjct: 41 GGNYTTEDVLPSLEEQGVPQLY--------------------PKDS----NLDYK-KELR 75
Query: 128 KLMKSXXXXXXXXXXXXXVDSSRYEKKLDEIRVIAINIHHLLNEYRPHQSRESLIMLFEE 187
L + S+Y K++ EI I N+HHLLN RPHQ+R +LI + E
Sbjct: 76 SLNRELQLHILELADVLVDRPSQYAKRIGEISSIFKNLHHLLNSLRPHQARATLIHIMEL 135
Query: 188 QLEHKRKEMEHINKVCDEVESKL 210
Q++ +++ +E I + +E + L
Sbjct: 136 QIQQRKQAVEDIKRRREEAQGLL 158
>Hs4758064 [K] KOG0570 Transcriptional coactivator
Length = 233
Score = 70.1 bits (170), Expect = 2e-12
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 56/220 (25%)
Query: 1 MSDKNEVSSLYPPPPPFIQFFTEENSKLFRECGKDEEKLAKCTTKQREQLKYFVKPELPR 60
M + +VS+L PPP +I+ +T+EN +E LA KP P
Sbjct: 1 MGEPQQVSALPPPPMQYIKEYTDENI---------QEGLAP-------------KPPPPI 38
Query: 61 DGSYRAFGNVWKIKDELPE-LSQMGIEQLYRKRESVTELENGTTTEVEPSPQDSQSGTNY 119
SY FGN ++ D + L GIE+L+ + +
Sbjct: 39 KDSYMMFGNQFQCDDLIIRPLESQGIERLHPMQ--------------------------F 72
Query: 120 ENKIQESKKLMKSXXXXXXXXXXXX--XVDSSRYEKKLDEIRVIAINIHHLLNEYRPHQS 177
++K +E +KL S S + E+KL++++++ +++HHL+NEYRPHQ+
Sbjct: 73 DHK-KELRKLNMSILINFLDLLDILIRSPGSIKREEKLEDLKLLFVHVHHLINEYRPHQA 131
Query: 178 RESLIMLFE----EQLEHKRKEMEHINKVCDEVESKLAQL 213
RE+L ++ E ++LE + +H+ +V + +++ LA L
Sbjct: 132 RETLRVMMEVQKRQRLETAERFQKHLERVIEMIQNCLASL 171
>SPBC14F5.08 [K] KOG0570 Transcriptional coactivator
Length = 376
Score = 68.2 bits (165), Expect = 8e-12
Identities = 27/48 (56%), Positives = 41/48 (85%)
Query: 150 RYEKKLDEIRVIAINIHHLLNEYRPHQSRESLIMLFEEQLEHKRKEME 197
++ K++ IRV+ +N+HHL+N+YRPHQSRESLIML E+QL+H+ ++E
Sbjct: 252 QFPSKVENIRVLLLNLHHLINDYRPHQSRESLIMLLEKQLKHEESQVE 299
Score = 60.8 bits (146), Expect = 1e-09
Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 8/93 (8%)
Query: 6 EVSSLYPPPPPFIQFFTEEN-----SKLFRECGKDEEK--LAKCTTKQREQL-KYFVKPE 57
++ S +PPPPP+ + FT EN S + +E +++ L T ++ E L K F KP
Sbjct: 8 QLFSAFPPPPPYYKLFTRENIEKVISNMEKEAKHEDDANTLQPKTEEEIESLAKLFKKPS 67
Query: 58 LPRDGSYRAFGNVWKIKDELPELSQMGIEQLYR 90
G+Y+ FG+ W++ + +P L + GI +LY+
Sbjct: 68 CLTSGTYQMFGDTWRLDEAIPSLKEFGIPELYK 100
>7299354_1 [K] KOG0570 Transcriptional coactivator
Length = 265
Score = 56.6 bits (135), Expect = 2e-08
Identities = 26/71 (36%), Positives = 48/71 (66%), Gaps = 4/71 (5%)
Query: 147 DSSRYEKKLDEIRVIAINIHHLLNEYRPHQSRESLIMLFE----EQLEHKRKEMEHINKV 202
DS R +K+D+I ++ +N+HHLLNE+RPHQ+RE+L ++ E +++E + +H+ +V
Sbjct: 103 DSPRRTEKIDDISLLFVNMHHLLNEFRPHQARETLRVMMEMQKRQRVETAARFQKHLERV 162
Query: 203 CDEVESKLAQL 213
+ V + + L
Sbjct: 163 REIVNTAFSAL 173
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.311 0.130 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,300,780
Number of Sequences: 60738
Number of extensions: 545665
Number of successful extensions: 1874
Number of sequences better than 1.0e-05: 6
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1857
Number of HSP's gapped (non-prelim): 10
length of query: 213
length of database: 30,389,216
effective HSP length: 102
effective length of query: 111
effective length of database: 24,193,940
effective search space: 2685527340
effective search space used: 2685527340
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)